Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0031180 | Msa0321130 | 0.809044 | 2.298250e-50 | -8.615850e-47 |
| Msa0043560 | Msa0321130 | 0.803488 | 3.404316e-49 | -8.615850e-47 |
| Msa0064920 | Msa0321130 | 0.817814 | 2.712464e-52 | -8.615850e-47 |
| Msa0078480 | Msa0321130 | 0.808135 | 3.594098e-50 | -8.615850e-47 |
| Msa0321130 | Msa0347950 | 0.809757 | 1.615753e-50 | -8.615850e-47 |
| Msa0321130 | Msa0347990 | 0.806364 | 8.528055e-50 | -8.615850e-47 |
| Msa0321130 | Msa0358400 | 0.810364 | 1.195755e-50 | -8.615850e-47 |
| Msa0321130 | Msa0423840 | 0.808657 | 2.781077e-50 | -8.615850e-47 |
| Msa0321130 | Msa0468250 | 0.806121 | 9.592400e-50 | -8.615850e-47 |
| Msa0321130 | Msa1333730 | 0.820208 | 7.745069e-53 | -8.615850e-47 |
| Msa0321130 | Msa1349450 | 0.803190 | 3.923283e-49 | -8.615850e-47 |
| Msa0321130 | Msa1435260 | 0.801317 | 9.534561e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 22 sgRNAs with CRISPR-Local
Find 426 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTATTTGAAGCTTCTTGA+TGG | 0.352791 | 2_4:-22217250 | None:intergenic |
| TGCTATTTGAAGCTTCTTGA+TGG | 0.352791 | 2_4:-22219032 | None:intergenic |
| GAAGAAGTCGTGCGAAGAAA+AGG | 0.455084 | 2_4:+22211849 | Msa0321130:CDS |
| TGTTTGCTTTAGCGGTGAAA+GGG | 0.455548 | 2_4:+22217214 | Msa0321130:intron |
| TGTTTGCTTTAGCGGTGAAA+GGG | 0.455548 | 2_4:+22218996 | Msa0321130:intron |
| TCTCTCTCTCTAGGATTCTA+GGG | 0.456269 | 2_4:+22218128 | Msa0321130:intron |
| GTGTTTGCTTTAGCGGTGAA+AGG | 0.479767 | 2_4:+22217213 | Msa0321130:intron |
| GTGTTTGCTTTAGCGGTGAA+AGG | 0.479767 | 2_4:+22218995 | Msa0321130:intron |
| AAATGATAGGGGATATAGTC+AGG | 0.496852 | 2_4:+22211736 | None:intergenic |
| ATCGAACCTGTGAGTTGTTG+AGG | 0.514980 | 2_4:-22218181 | None:intergenic |
| CTTCTTCCTCAACAACTCAC+AGG | 0.521375 | 2_4:+22218175 | Msa0321130:CDS |
| ATGTGGATGACATTGATTGT+AGG | 0.574389 | 2_4:+22211811 | Msa0321130:CDS |
| GTCGTGCGAAGAAAAGGTAC+TGG | 0.580656 | 2_4:+22211855 | Msa0321130:CDS |
| GTTTGCTTTAGCGGTGAAAG+GGG | 0.634000 | 2_4:+22217215 | Msa0321130:intron |
| GTTTGCTTTAGCGGTGAAAG+GGG | 0.634000 | 2_4:+22218997 | Msa0321130:intron |
| TTTGCTTTAGCGGTGAAAGG+GGG | 0.647874 | 2_4:+22217216 | Msa0321130:intron |
| TTTGCTTTAGCGGTGAAAGG+GGG | 0.647874 | 2_4:+22218998 | Msa0321130:intron |
| GATTCCGTTGCTTTGAGACG+CGG | 0.660883 | 2_4:+22217289 | Msa0321130:CDS |
| GATTCCGTTGCTTTGAGACG+CGG | 0.660883 | 2_4:+22219071 | Msa0321130:CDS |
| GGTACTGGTGTAGTTGATGA+CGG | 0.700458 | 2_4:+22211870 | Msa0321130:CDS |
| AATACCGCGTCTCAAAGCAA+CGG | 0.712687 | 2_4:-22217293 | None:intergenic |
| AATACCGCGTCTCAAAGCAA+CGG | 0.712687 | 2_4:-22219075 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATATTTTAAAAATAAAT+GGG | - | chr2_4:22212916-22212935 | None:intergenic | 0.0% |
| !!! | AAAAATATTTTAAAAATAAA+TGG | - | chr2_4:22212917-22212936 | None:intergenic | 0.0% |
| !!! | GTTTAATGAATTTTATAATA+TGG | - | chr2_4:22212188-22212207 | None:intergenic | 10.0% |
| !!! | AAACTTTCTTTTTTTATTAT+TGG | - | chr2_4:22213319-22213338 | None:intergenic | 10.0% |
| !!! | AAACTTTCTTTTTTTATTAT+TGG | - | chr2_4:22213319-22213338 | None:intergenic | 10.0% |
| !!! | ATTTTGTTTATATTTTGAAA+CGG | - | chr2_4:22214913-22214932 | None:intergenic | 10.0% |
| !!! | ATATTTTTTTAATAGTAAAG+AGG | + | chr2_4:22215173-22215192 | Msa0321130:intron | 10.0% |
| !!! | AAAAATGATTGAATATTTTA+AGG | + | chr2_4:22215207-22215226 | Msa0321130:intron | 10.0% |
| !! | AAAAAATATATAAATACTAG+TGG | - | chr2_4:22215520-22215539 | None:intergenic | 10.0% |
| !!! | TATTTTTATATATCTAAGAA+CGG | - | chr2_4:22216119-22216138 | None:intergenic | 10.0% |
| !!! | ATATATTTTATTGACTAAAT+TGG | - | chr2_4:22216843-22216862 | None:intergenic | 10.0% |
| !! | CAAAAATTTATATACTTAAA+TGG | - | chr2_4:22216881-22216900 | None:intergenic | 10.0% |
| !! | AATTACAAACTATTAAAAAT+AGG | + | chr2_4:22217125-22217144 | Msa0321130:intron | 10.0% |
| !!! | TTATTATATTTTTTGTTTGA+AGG | - | chr2_4:22217981-22218000 | None:intergenic | 10.0% |
| !! | AATTACAAACTATTAAAAAT+AGG | + | chr2_4:22217125-22217144 | Msa0321130:intron | 10.0% |
| !! | ACACATAAATATTAGAAAAA+GGG | + | chr2_4:22212294-22212313 | Msa0321130:intron | 15.0% |
| !!! | ATAATTTTAATATCAATCGA+AGG | + | chr2_4:22212359-22212378 | Msa0321130:intron | 15.0% |
| !!! | GAATAATCATTTTAAAAACA+AGG | + | chr2_4:22212434-22212453 | Msa0321130:intron | 15.0% |
| !! | ATTATCTTATATCTTCTATA+AGG | + | chr2_4:22212697-22212716 | Msa0321130:intron | 15.0% |
| !! | CTATTTAATATCCTTAAAAT+GGG | - | chr2_4:22213080-22213099 | None:intergenic | 15.0% |
| !! | TCTATTTAATATCCTTAAAA+TGG | - | chr2_4:22213081-22213100 | None:intergenic | 15.0% |
| !!! | TTTATTTTTGTTCAATGTTA+AGG | + | chr2_4:22214338-22214357 | Msa0321130:intron | 15.0% |
| !!! | TTATTTTTGTTCAATGTTAA+GGG | + | chr2_4:22214339-22214358 | Msa0321130:intron | 15.0% |
| !!! | TGAGAATTATTTTCTAATTT+GGG | - | chr2_4:22214637-22214656 | None:intergenic | 15.0% |
| !!! | ATAAACAAAATTCACTTTTT+AGG | + | chr2_4:22214922-22214941 | Msa0321130:intron | 15.0% |
| !!! | ATTTTGCTTATATTTTGAAA+CGG | + | chr2_4:22215020-22215039 | Msa0321130:intron | 15.0% |
| !!! | ATTCATTTATTTCAAGTAAA+TGG | - | chr2_4:22215434-22215453 | None:intergenic | 15.0% |
| !!! | TTAGGAATACTTTATTTTTA+GGG | - | chr2_4:22215636-22215655 | None:intergenic | 15.0% |
| !!! | AAACATGTTATTTTTTTAAG+AGG | + | chr2_4:22216403-22216422 | Msa0321130:intron | 15.0% |
| !!! | ATAATATTTTTTTGGTTACA+AGG | + | chr2_4:22216562-22216581 | Msa0321130:intron | 15.0% |
| !!! | TAATATTTTTTTGGTTACAA+GGG | + | chr2_4:22216563-22216582 | Msa0321130:intron | 15.0% |
| !!! | ATAAATAGTCTATTCTAAAA+TGG | - | chr2_4:22216797-22216816 | None:intergenic | 15.0% |
| !! | CTTAAATATATAGATAAGTA+TGG | - | chr2_4:22217453-22217472 | None:intergenic | 15.0% |
| !! | CATACTTATCTATATATTTA+AGG | + | chr2_4:22217451-22217470 | Msa0321130:intron | 15.0% |
| !!! | CAAATATTTATTTTTGTTCT+TGG | + | chr2_4:22217474-22217493 | Msa0321130:intron | 15.0% |
| !! | TTAATGAAATGCATAAATTA+AGG | - | chr2_4:22217557-22217576 | None:intergenic | 15.0% |
| !!! | AATAATAAATTTGTTCTTTG+TGG | + | chr2_4:22218551-22218570 | Msa0321130:intron | 15.0% |
| !! | TTATGTAAAAACTACAAATG+TGG | + | chr2_4:22211794-22211813 | Msa0321130:CDS | 20.0% |
| !! | TAAGGAAACTAAAAAATGTA+AGG | + | chr2_4:22212064-22212083 | Msa0321130:intron | 20.0% |
| !! | AAAAATGTAAGGATTGAAAA+TGG | + | chr2_4:22212075-22212094 | Msa0321130:intron | 20.0% |
| !! | TAAAATTCATTAAACACTTG+TGG | + | chr2_4:22212193-22212212 | Msa0321130:intron | 20.0% |
| !! | CACACATAAATATTAGAAAA+AGG | + | chr2_4:22212293-22212312 | Msa0321130:intron | 20.0% |
| !! | CACATAAATATTAGAAAAAG+GGG | + | chr2_4:22212295-22212314 | Msa0321130:intron | 20.0% |
| !! | TTAGAATGAATAACATTAAG+TGG | + | chr2_4:22212332-22212351 | Msa0321130:intron | 20.0% |
| !! | GAAAATGTACACTTTATTAA+TGG | + | chr2_4:22212459-22212478 | Msa0321130:intron | 20.0% |
| !!! | TTGAAATGATTTTAGTTTAC+AGG | - | chr2_4:22213052-22213071 | None:intergenic | 20.0% |
| !!! | TTTCAATTTTACCCATTTTA+AGG | + | chr2_4:22213066-22213085 | Msa0321130:intron | 20.0% |
| !!! | GAATTTTTAATTTACACTCT+CGG | - | chr2_4:22213291-22213310 | None:intergenic | 20.0% |
| !!! | GAGAGTGTAAATTAAAAATT+CGG | + | chr2_4:22213290-22213309 | Msa0321130:intron | 20.0% |
| !! | AAACTATTTCCTTTAAACTT+TGG | + | chr2_4:22213901-22213920 | Msa0321130:intron | 20.0% |
| !! | TGTTTATATTTGTTCGATAT+CGG | - | chr2_4:22213988-22214007 | None:intergenic | 20.0% |
| !!! | ATTTTTTAACTCATTGTTGT+TGG | - | chr2_4:22214108-22214127 | None:intergenic | 20.0% |
| !!! | TATTTTTGTTCAATGTTAAG+GGG | + | chr2_4:22214340-22214359 | Msa0321130:intron | 20.0% |
| !! | ATTGAACATAAAAAAACCAA+GGG | + | chr2_4:22214420-22214439 | Msa0321130:intron | 20.0% |
| !!! | AGAATTATTTTCTAATTTGG+GGG | - | chr2_4:22214635-22214654 | None:intergenic | 20.0% |
| !!! | GAGAATTATTTTCTAATTTG+GGG | - | chr2_4:22214636-22214655 | None:intergenic | 20.0% |
| !!! | GTGAGAATTATTTTCTAATT+TGG | - | chr2_4:22214638-22214657 | None:intergenic | 20.0% |
| !!! | GTTTTAGAGAAATTCTAATA+TGG | + | chr2_4:22215106-22215125 | Msa0321130:intron | 20.0% |
| !!! | AAATTTTACTTAAAACTTCG+AGG | - | chr2_4:22215296-22215315 | None:intergenic | 20.0% |
| !!! | TAGACACAAAAAGTATATAA+TGG | + | chr2_4:22215471-22215490 | Msa0321130:intron | 20.0% |
| !! | AATATATAAATACTAGTGGT+GGG | - | chr2_4:22215516-22215535 | None:intergenic | 20.0% |
| !! | AAATATATAAATACTAGTGG+TGG | - | chr2_4:22215517-22215536 | None:intergenic | 20.0% |
| !!! | GTTAGGAATACTTTATTTTT+AGG | - | chr2_4:22215637-22215656 | None:intergenic | 20.0% |
| !!! | ATGGTTTTATCGTTTATAAA+AGG | - | chr2_4:22215741-22215760 | None:intergenic | 20.0% |
| !!! | TGATTTAGTTTATAACCTTT+TGG | + | chr2_4:22216342-22216361 | Msa0321130:intron | 20.0% |
| !!! | GATTTAGTTTATAACCTTTT+GGG | + | chr2_4:22216343-22216362 | Msa0321130:intron | 20.0% |
| !!! | TTTCTTTAAAAAAATTCAGC+AGG | - | chr2_4:22216380-22216399 | None:intergenic | 20.0% |
| !! | TATTGTCAACAAAAAAGTTA+GGG | - | chr2_4:22216477-22216496 | None:intergenic | 20.0% |
| !! | TTATTGTCAACAAAAAAGTT+AGG | - | chr2_4:22216478-22216497 | None:intergenic | 20.0% |
| !!! | AATATTTTTTTGGTTACAAG+GGG | + | chr2_4:22216564-22216583 | Msa0321130:intron | 20.0% |
| !!! | TTGATGTTTCTTTCTTATTT+TGG | - | chr2_4:22216696-22216715 | None:intergenic | 20.0% |
| !!! | TTTTTAACTCAAATCCAAAT+AGG | + | chr2_4:22217330-22217349 | Msa0321130:intron | 20.0% |
| !!! | ACGTAAGTGTATTTTTTTAA+GGG | - | chr2_4:22217369-22217388 | None:intergenic | 20.0% |
| !! | TCAAAATAGTCATTAAACAA+AGG | + | chr2_4:22217577-22217596 | Msa0321130:intron | 20.0% |
| !!! | AAAATGTCTTTTTTTTTTCG+CGG | + | chr2_4:22217635-22217654 | Msa0321130:intron | 20.0% |
| !! | GATAATACATAATATATGCA+AGG | - | chr2_4:22217682-22217701 | None:intergenic | 20.0% |
| !!! | ACGCAAATGTTTTTATAAAA+AGG | + | chr2_4:22217731-22217750 | Msa0321130:intron | 20.0% |
| !!! | ATTTTGAAGTTTCAATACAT+CGG | + | chr2_4:22217907-22217926 | Msa0321130:intron | 20.0% |
| !!! | TTTTTTGTTTGAAGGATAAA+TGG | - | chr2_4:22217973-22217992 | None:intergenic | 20.0% |
| !!! | AATAAAGCTTGATTTTTGTT+AGG | + | chr2_4:22218467-22218486 | Msa0321130:intron | 20.0% |
| !!! | ATAAAGCTTGATTTTTGTTA+GGG | + | chr2_4:22218468-22218487 | Msa0321130:intron | 20.0% |
| ! | AAATGGACATATATATGACA+TGG | + | chr2_4:22212092-22212111 | Msa0321130:intron | 25.0% |
| !! | TCAATTGATTTATTAGGAGT+TGG | - | chr2_4:22212131-22212150 | None:intergenic | 25.0% |
| ! | AACTCCTAATAAATCAATTG+AGG | + | chr2_4:22212130-22212149 | Msa0321130:intron | 25.0% |
| !! | ACTTCCTCAATTGATTTATT+AGG | - | chr2_4:22212137-22212156 | None:intergenic | 25.0% |
| ! | TCTAATATTTATGTGTGAGA+TGG | - | chr2_4:22212290-22212309 | None:intergenic | 25.0% |
| ! | TAAATATTAGAAAAAGGGGT+AGG | + | chr2_4:22212299-22212318 | Msa0321130:intron | 25.0% |
| ! | GTTATTCATTCTAATGTTTG+AGG | - | chr2_4:22212326-22212345 | None:intergenic | 25.0% |
| ! | TAATATCAATCGAAGGAAAA+TGG | + | chr2_4:22212366-22212385 | Msa0321130:intron | 25.0% |
| ! | GTACACTTTATTAATGGAAA+AGG | + | chr2_4:22212465-22212484 | Msa0321130:intron | 25.0% |
| ! | TTATTAATGGAAAAGGAAGA+TGG | + | chr2_4:22212472-22212491 | Msa0321130:intron | 25.0% |
| ! | GAAAGGTTATATTATGTGTT+TGG | - | chr2_4:22212595-22212614 | None:intergenic | 25.0% |
| ! | GAAACTAATATACCATATCA+TGG | + | chr2_4:22213131-22213150 | Msa0321130:intron | 25.0% |
| ! | AAAAGAAGAAAGGAAGAAAT+TGG | + | chr2_4:22213160-22213179 | Msa0321130:intron | 25.0% |
| !!! | TAGATGATTCTTGTTATTGA+TGG | - | chr2_4:22213704-22213723 | None:intergenic | 25.0% |
| ! | TTTGTGATTCCAAAGTTTAA+AGG | - | chr2_4:22213913-22213932 | None:intergenic | 25.0% |
| !!! | AACTTTGGAATCACAAAATA+AGG | + | chr2_4:22213916-22213935 | Msa0321130:intron | 25.0% |
| !!! | TAGTTTTGTTGCAATTTTTG+TGG | - | chr2_4:22213951-22213970 | None:intergenic | 25.0% |
| ! | TCACTAACAACCAATAAAAA+TGG | + | chr2_4:22214061-22214080 | Msa0321130:intron | 25.0% |
| ! | CACTAACAACCAATAAAAAT+GGG | + | chr2_4:22214062-22214081 | Msa0321130:intron | 25.0% |
| ! | CATTGAACATAAAAAAACCA+AGG | + | chr2_4:22214419-22214438 | Msa0321130:intron | 25.0% |
| ! | AAAAAAACCAAGGGAAAAAT+AGG | + | chr2_4:22214429-22214448 | Msa0321130:intron | 25.0% |
| ! | AAAAAACCAAGGGAAAAATA+GGG | + | chr2_4:22214430-22214449 | Msa0321130:intron | 25.0% |
| ! | TAAATACCAATAAAGCAAAG+AGG | + | chr2_4:22214741-22214760 | Msa0321130:intron | 25.0% |
| !!! | TGTTTATATTTTGAAACGGA+GGG | - | chr2_4:22214909-22214928 | None:intergenic | 25.0% |
| !!! | TTGTTTATATTTTGAAACGG+AGG | - | chr2_4:22214910-22214929 | None:intergenic | 25.0% |
| !!! | ATGACCAAATAAAAAGTGTT+TGG | + | chr2_4:22215133-22215152 | Msa0321130:intron | 25.0% |
| !! | ATTTTATCTTGAGATTTGTG+TGG | + | chr2_4:22215312-22215331 | Msa0321130:intron | 25.0% |
| !! | TACTTTTGAATCCTTAACAA+AGG | + | chr2_4:22215395-22215414 | Msa0321130:intron | 25.0% |
| !! | ACTTTTGAATCCTTAACAAA+GGG | + | chr2_4:22215396-22215415 | Msa0321130:intron | 25.0% |
| !! | TTTATTTCAAGTAAATGGAG+AGG | - | chr2_4:22215429-22215448 | None:intergenic | 25.0% |
| ! | TAAATGGATATGACACTAAA+TGG | + | chr2_4:22215575-22215594 | Msa0321130:intron | 25.0% |
| ! | TTTGCTTTATGAGAAATGTT+AGG | - | chr2_4:22215654-22215673 | None:intergenic | 25.0% |
| ! | AATTATATGTCGAGTGTTAT+TGG | - | chr2_4:22215684-22215703 | None:intergenic | 25.0% |
| !!! | TTTTATTTAGGTCTTTGTGT+TGG | - | chr2_4:22215769-22215788 | None:intergenic | 25.0% |
| ! | CAAAGACCTAAATAAAACAA+TGG | + | chr2_4:22215772-22215791 | Msa0321130:intron | 25.0% |
| !!! | GCAAAACCATTGTTTTATTT+AGG | - | chr2_4:22215781-22215800 | None:intergenic | 25.0% |
| ! | TTGTTTATAATAGTAACCGA+AGG | + | chr2_4:22216037-22216056 | Msa0321130:intron | 25.0% |
| ! | TTTATATATCTAAGAACGGA+GGG | - | chr2_4:22216115-22216134 | None:intergenic | 25.0% |
| !! | TTTTATATATCTAAGAACGG+AGG | - | chr2_4:22216116-22216135 | None:intergenic | 25.0% |
| !! | GTTGACAATAAACTTCTTTT+TGG | + | chr2_4:22216487-22216506 | Msa0321130:intron | 25.0% |
| !!! | GGGGTACTATAATATTTTTT+TGG | + | chr2_4:22216554-22216573 | Msa0321130:intron | 25.0% |
| !!! | ATATTTTTTTGGTTACAAGG+GGG | + | chr2_4:22216565-22216584 | Msa0321130:intron | 25.0% |
| ! | TGAACTACTTATTATGAGTA+CGG | - | chr2_4:22217012-22217031 | None:intergenic | 25.0% |
| ! | CAATGATCATAGTTTAGTAA+GGG | - | chr2_4:22217101-22217120 | None:intergenic | 25.0% |
| ! | ACAATGATCATAGTTTAGTA+AGG | - | chr2_4:22217102-22217121 | None:intergenic | 25.0% |
| !!! | CACGTAAGTGTATTTTTTTA+AGG | - | chr2_4:22217370-22217389 | None:intergenic | 25.0% |
| ! | AAATTAAGGACTACAGTATT+TGG | - | chr2_4:22217543-22217562 | None:intergenic | 25.0% |
| ! | CAATAAAAGCTAATTTGGAT+CGG | - | chr2_4:22217612-22217631 | None:intergenic | 25.0% |
| ! | TTGGTCAATAAAAGCTAATT+TGG | - | chr2_4:22217617-22217636 | None:intergenic | 25.0% |
| !! | GCGAAAAAAAAAAGACATTT+TGG | - | chr2_4:22217636-22217655 | None:intergenic | 25.0% |
| !!! | AAATGTCTTTTTTTTTTCGC+GGG | + | chr2_4:22217636-22217655 | Msa0321130:intron | 25.0% |
| ! | ACATAATATATGCAAGGTTT+GGG | - | chr2_4:22217676-22217695 | None:intergenic | 25.0% |
| ! | TACATAATATATGCAAGGTT+TGG | - | chr2_4:22217677-22217696 | None:intergenic | 25.0% |
| !!! | TTTTTTTTCTTACACTGGTT+TGG | + | chr2_4:22218388-22218407 | Msa0321130:intron | 25.0% |
| ! | TGAACTACTTATTATGAGTA+CGG | - | chr2_4:22217012-22217031 | None:intergenic | 25.0% |
| ! | CAATGATCATAGTTTAGTAA+GGG | - | chr2_4:22217101-22217120 | None:intergenic | 25.0% |
| ! | ACAATGATCATAGTTTAGTA+AGG | - | chr2_4:22217102-22217121 | None:intergenic | 25.0% |
| ATAAAGTTGTTCGAAAGTCT+AGG | + | chr2_4:22212732-22212751 | Msa0321130:intron | 30.0% | |
| !!! | TCTTTTTTGAAGCCATGATA+TGG | - | chr2_4:22213146-22213165 | None:intergenic | 30.0% |
| ATGGCTTCAAAAAAGAAGAA+AGG | + | chr2_4:22213150-22213169 | Msa0321130:intron | 30.0% | |
| AGAAAGTTTAATAAACCCGT+AGG | + | chr2_4:22213330-22213349 | Msa0321130:intron | 30.0% | |
| ! | TATTATTGGTGACCGAATTT+AGG | - | chr2_4:22213305-22213324 | None:intergenic | 30.0% |
| AAGAAAGTTTAATAAACCCG+CGG | + | chr2_4:22213329-22213348 | Msa0321130:intron | 30.0% | |
| TAAAAGATGTGCTTCATGTA+GGG | - | chr2_4:22213649-22213668 | None:intergenic | 30.0% | |
| TTAAAAGATGTGCTTCATGT+AGG | - | chr2_4:22213650-22213669 | None:intergenic | 30.0% | |
| ! | AGCACATCTTTTAATGTAAG+AGG | + | chr2_4:22213656-22213675 | Msa0321130:intron | 30.0% |
| AGTGCTTAAATGCTTAATCT+GGG | - | chr2_4:22213807-22213826 | None:intergenic | 30.0% | |
| TCACTTAATGCCTCTAATAT+AGG | - | chr2_4:22213837-22213856 | None:intergenic | 30.0% | |
| TGGTTGTTAGTGAACTTATT+TGG | - | chr2_4:22214054-22214073 | None:intergenic | 30.0% | |
| !! | CATCTTTGACCCATTTTTAT+TGG | - | chr2_4:22214074-22214093 | None:intergenic | 30.0% |
| ATAAAAATGGGTCAAAGATG+TGG | + | chr2_4:22214074-22214093 | Msa0321130:intron | 30.0% | |
| ATACTCTTCTTAGTGCATTT+GGG | - | chr2_4:22214152-22214171 | None:intergenic | 30.0% | |
| TAATGAAGAAACCAGAATGA+AGG | + | chr2_4:22214565-22214584 | Msa0321130:intron | 30.0% | |
| ! | AATCCAATGAGTTTGCTTAA+AGG | + | chr2_4:22214716-22214735 | Msa0321130:intron | 30.0% |
| TATTTCATCCAATAAGAGAG+TGG | - | chr2_4:22214792-22214811 | None:intergenic | 30.0% | |
| CTTATTGGATGAAATAGATG+TGG | + | chr2_4:22214796-22214815 | Msa0321130:intron | 30.0% | |
| ! | ATACTACTACACTTTGGAAA+TGG | + | chr2_4:22214819-22214838 | Msa0321130:intron | 30.0% |
| CTTATTGGGTGAAATCTATA+TGG | - | chr2_4:22214867-22214886 | None:intergenic | 30.0% | |
| ATAATACCCACTCTCTTATT+GGG | - | chr2_4:22214881-22214900 | None:intergenic | 30.0% | |
| TATAATACCCACTCTCTTAT+TGG | - | chr2_4:22214882-22214901 | None:intergenic | 30.0% | |
| !!! | TGCTTATATTTTGAAACGGA+TGG | + | chr2_4:22215024-22215043 | Msa0321130:intron | 30.0% |
| !! | GTGACCAAACACTTTTTATT+TGG | - | chr2_4:22215140-22215159 | None:intergenic | 30.0% |
| AAGACCAAATCAATAGTGTT+TGG | - | chr2_4:22215256-22215275 | None:intergenic | 30.0% | |
| ATCTCTGCAAATGGAATAAA+TGG | + | chr2_4:22215559-22215578 | Msa0321130:intron | 30.0% | |
| !!! | ACTTTATTTTTAGGGTCTTG+CGG | - | chr2_4:22215628-22215647 | None:intergenic | 30.0% |
| !! | CGTTTATAAAAGGTGTTAGT+GGG | - | chr2_4:22215731-22215750 | None:intergenic | 30.0% |
| !! | TCGTTTATAAAAGGTGTTAG+TGG | - | chr2_4:22215732-22215751 | None:intergenic | 30.0% |
| TTTATAATAGTAACCGAAGG+AGG | + | chr2_4:22216040-22216059 | Msa0321130:intron | 30.0% | |
| GAGTATTATGTCTTATGTTG+TGG | - | chr2_4:22216093-22216112 | None:intergenic | 30.0% | |
| GAGACATATATTCAAGAGTA+AGG | + | chr2_4:22216300-22216319 | Msa0321130:intron | 30.0% | |
| AGGAATAAAGTTAACCCAAA+AGG | - | chr2_4:22216360-22216379 | None:intergenic | 30.0% | |
| TATTACCATTGTGTGTTGTA+GGG | + | chr2_4:22216534-22216553 | Msa0321130:intron | 30.0% | |
| !!! | TATTTTTTTGGTTACAAGGG+GGG | + | chr2_4:22216566-22216585 | Msa0321130:intron | 30.0% |
| TATTGTTGTGTTTGCTTTAG+CGG | + | chr2_4:22217206-22217225 | Msa0321130:intron | 30.0% | |
| !! | GACTACAGTATTTGGAATTT+TGG | - | chr2_4:22217535-22217554 | None:intergenic | 30.0% |
| CGATTAGTAAATATTCTCTC+TGG | - | chr2_4:22217758-22217777 | None:intergenic | 30.0% | |
| !!! | ATGATTGTTTTGAGTAACTG+AGG | + | chr2_4:22218353-22218372 | Msa0321130:intron | 30.0% |
| !!! | CGAGTTTTTTTTTCTTACAC+TGG | + | chr2_4:22218383-22218402 | Msa0321130:intron | 30.0% |
| TATTGTTGTGTTTGCTTTAG+CGG | + | chr2_4:22217206-22217225 | Msa0321130:intron | 30.0% | |
| ! | ATGTGGATGACATTGATTGT+AGG | + | chr2_4:22211811-22211830 | Msa0321130:CDS | 35.0% |
| CTTAACTACTAGTGCTCTAA+GGG | - | chr2_4:22212048-22212067 | None:intergenic | 35.0% | |
| ATCGAAGGAAAATGGTTATG+TGG | + | chr2_4:22212374-22212393 | Msa0321130:intron | 35.0% | |
| GTGTTAAAGCCATATTTCAG+AGG | + | chr2_4:22212506-22212525 | Msa0321130:intron | 35.0% | |
| !! | TGCTTTTCAAGGTCTTAACA+TGG | - | chr2_4:22212645-22212664 | None:intergenic | 35.0% |
| AAGTCTAGGAACATGAAACT+AGG | + | chr2_4:22212746-22212765 | Msa0321130:intron | 35.0% | |
| AGTCTAGGAACATGAAACTA+GGG | + | chr2_4:22212747-22212766 | Msa0321130:intron | 35.0% | |
| ACAGGACATTGTTCAATGTA+TGG | - | chr2_4:22213034-22213053 | None:intergenic | 35.0% | |
| !! | TGATTTGCTCTGATTCACTT+GGG | - | chr2_4:22213260-22213279 | None:intergenic | 35.0% |
| AGAAAGTTTAATAAACCCGC+GGG | + | chr2_4:22213475-22213494 | Msa0321130:intron | 35.0% | |
| AAAAGATGTGCTTCATGTAG+GGG | - | chr2_4:22213648-22213667 | None:intergenic | 35.0% | |
| GAGTGCTTAAATGCTTAATC+TGG | - | chr2_4:22213808-22213827 | None:intergenic | 35.0% | |
| ACTCTTAGAGCCTATATTAG+AGG | + | chr2_4:22213824-22213843 | Msa0321130:intron | 35.0% | |
| CGAGTGATGAGATGTTTATT+CGG | - | chr2_4:22213861-22213880 | None:intergenic | 35.0% | |
| GATACTCTTCTTAGTGCATT+TGG | - | chr2_4:22214153-22214172 | None:intergenic | 35.0% | |
| TTTGAGCCCTCCAATAAAAA+TGG | + | chr2_4:22214185-22214204 | Msa0321130:intron | 35.0% | |
| !! | AAGCCTCCATTTTTATTGGA+GGG | - | chr2_4:22214194-22214213 | None:intergenic | 35.0% |
| ! | GCTTTAGACTAAAACACAAG+TGG | + | chr2_4:22214251-22214270 | Msa0321130:intron | 35.0% |
| AATTCACACATCGATGAATG+AGG | + | chr2_4:22214274-22214293 | Msa0321130:intron | 35.0% | |
| ATTCACACATCGATGAATGA+GGG | + | chr2_4:22214275-22214294 | Msa0321130:intron | 35.0% | |
| TTTGTTCAATGTTAAGGGGT+CGG | + | chr2_4:22214344-22214363 | Msa0321130:intron | 35.0% | |
| GTTGCACAAAACGACAAAAA+AGG | + | chr2_4:22214537-22214556 | Msa0321130:intron | 35.0% | |
| !!! | GTTACTTTTTGCCTTCATTC+TGG | - | chr2_4:22214579-22214598 | None:intergenic | 35.0% |
| GGCAAAAAGTAACTTGACAA+CGG | + | chr2_4:22214586-22214605 | Msa0321130:intron | 35.0% | |
| AAGTAACTTGACAACGGATA+TGG | + | chr2_4:22214592-22214611 | Msa0321130:intron | 35.0% | |
| AGTCCTTTAAGCAAACTCAT+TGG | - | chr2_4:22214722-22214741 | None:intergenic | 35.0% | |
| ATCACTCCTCTTTGCTTTAT+TGG | - | chr2_4:22214750-22214769 | None:intergenic | 35.0% | |
| TAAAGCAAAGAGGAGTGATA+TGG | + | chr2_4:22214751-22214770 | Msa0321130:intron | 35.0% | |
| CTTTAACACCACTCTCTTAT+TGG | + | chr2_4:22214781-22214800 | Msa0321130:intron | 35.0% | |
| ATGTGGATACTACTACACTT+TGG | + | chr2_4:22214813-22214832 | Msa0321130:intron | 35.0% | |
| GAAATGGATCACACATAAAG+TGG | + | chr2_4:22214835-22214854 | Msa0321130:intron | 35.0% | |
| ATTTCACCCAATAAGAGAGT+GGG | + | chr2_4:22214872-22214891 | Msa0321130:intron | 35.0% | |
| !!! | TATTTTGAAACGGATGGAGT+AGG | + | chr2_4:22215030-22215049 | Msa0321130:intron | 35.0% |
| !!! | ATTTTGAAACGGATGGAGTA+GGG | + | chr2_4:22215031-22215050 | Msa0321130:intron | 35.0% |
| ! | GAGTAGGGTGTTAAAAAGAA+GGG | + | chr2_4:22215046-22215065 | Msa0321130:intron | 35.0% |
| ! | GTGTCCAAACACTATTGATT+TGG | + | chr2_4:22215249-22215268 | Msa0321130:intron | 35.0% |
| ! | AGGATCTTTTCCCTTTGTTA+AGG | - | chr2_4:22215409-22215428 | None:intergenic | 35.0% |
| TGTGTCTTTATCTCTGCAAA+TGG | + | chr2_4:22215550-22215569 | Msa0321130:intron | 35.0% | |
| !!! | CTTTATTTTTAGGGTCTTGC+GGG | - | chr2_4:22215627-22215646 | None:intergenic | 35.0% |
| TATCCTTATGACAGGTGTTA+AGG | + | chr2_4:22215808-22215827 | Msa0321130:intron | 35.0% | |
| TTTCCTTAACACCTGTCATA+AGG | - | chr2_4:22215814-22215833 | None:intergenic | 35.0% | |
| TATAGATCTGAGTGTGCATT+AGG | - | chr2_4:22215922-22215941 | None:intergenic | 35.0% | |
| TATAGATCTGAGTGTGCATT+AGG | - | chr2_4:22215922-22215941 | None:intergenic | 35.0% | |
| CTATTACCATTGTGTGTTGT+AGG | + | chr2_4:22216533-22216552 | Msa0321130:intron | 35.0% | |
| ATTACCATTGTGTGTTGTAG+GGG | + | chr2_4:22216535-22216554 | Msa0321130:intron | 35.0% | |
| !! | GTCTGATTTGCTAGAAAACA+CGG | + | chr2_4:22216959-22216978 | Msa0321130:intron | 35.0% |
| ! | TGCTATTTGAAGCTTCTTGA+TGG | - | chr2_4:22217253-22217272 | None:intergenic | 35.0% |
| TTCTTTGTGGTGTTCAATAC+AGG | + | chr2_4:22218564-22218583 | Msa0321130:intron | 35.0% | |
| TCTTTGTGGTGTTCAATACA+GGG | + | chr2_4:22218565-22218584 | Msa0321130:intron | 35.0% | |
| AATTCTGCACATATTGCTTG+TGG | + | chr2_4:22218650-22218669 | Msa0321130:intron | 35.0% | |
| ATTCTGCACATATTGCTTGT+GGG | + | chr2_4:22218651-22218670 | Msa0321130:intron | 35.0% | |
| ! | TGCTATTTGAAGCTTCTTGA+TGG | - | chr2_4:22217253-22217272 | None:intergenic | 35.0% |
| CCTTAACTACTAGTGCTCTA+AGG | - | chr2_4:22212049-22212068 | None:intergenic | 40.0% | |
| ! | CCTTAGAGCACTAGTAGTTA+AGG | + | chr2_4:22212046-22212065 | Msa0321130:intron | 40.0% |
| !! | CTCATTCTGCCTCTGAAATA+TGG | - | chr2_4:22212518-22212537 | None:intergenic | 40.0% |
| TCCAAAACGACACTAAAGTG+TGG | + | chr2_4:22212540-22212559 | Msa0321130:intron | 40.0% | |
| !!! | TCCACACTTTAGTGTCGTTT+TGG | - | chr2_4:22212544-22212563 | None:intergenic | 40.0% |
| !! | TATGTGTTTGGTGCACGAAT+TGG | - | chr2_4:22212583-22212602 | None:intergenic | 40.0% |
| GAGTTGCTAAGGATCATGAA+AGG | - | chr2_4:22212612-22212631 | None:intergenic | 40.0% | |
| !! | GAAGACAATTCGAGTTGCTA+AGG | - | chr2_4:22212623-22212642 | None:intergenic | 40.0% |
| ! | TATTCTCGTCGTGCTTTTCA+AGG | - | chr2_4:22212656-22212675 | None:intergenic | 40.0% |
| TAGGAACATGAAACTAGGGA+TGG | + | chr2_4:22212751-22212770 | Msa0321130:intron | 40.0% | |
| TGAAACTAGGGATGGCAATA+CGG | + | chr2_4:22212759-22212778 | Msa0321130:intron | 40.0% | |
| !! | CTGATTTGCTCTGATTCACT+TGG | - | chr2_4:22213261-22213280 | None:intergenic | 40.0% |
| TGTTAAGCCCGCTAAAAAGT+CGG | - | chr2_4:22213380-22213399 | None:intergenic | 40.0% | |
| !!! | ACTTTTTAGCGGGCTTAACA+GGG | + | chr2_4:22213380-22213399 | Msa0321130:intron | 40.0% |
| TTTGAGCCCATCTCTATAGT+TGG | - | chr2_4:22213411-22213430 | None:intergenic | 40.0% | |
| ! | TATTGGTGACCGAATTTAGG+CGG | - | chr2_4:22213447-22213466 | None:intergenic | 40.0% |
| TAAAAAAGCGGGTCATAGCT+GGG | - | chr2_4:22213514-22213533 | None:intergenic | 40.0% | |
| TGTTAAGCCCGCTAAAAAAG+CGG | - | chr2_4:22213526-22213545 | None:intergenic | 40.0% | |
| !!! | CTTTTTTAGCGGGCTTAACA+GGG | + | chr2_4:22213526-22213545 | Msa0321130:intron | 40.0% |
| !!! | TTTTTTAGCGGGCTTAACAG+GGG | + | chr2_4:22213527-22213546 | Msa0321130:intron | 40.0% |
| TTTGAGCCCATCTCTATAGT+TGG | - | chr2_4:22213411-22213430 | None:intergenic | 40.0% | |
| !! | GTTTAACCCGTCATTTTAGG+CGG | - | chr2_4:22213593-22213612 | None:intergenic | 40.0% |
| !! | GCCTAAAATGACGGGTTAAA+CGG | + | chr2_4:22213592-22213611 | Msa0321130:intron | 40.0% |
| !! | CCTAAAATGACGGGTTAAAC+GGG | + | chr2_4:22213593-22213612 | Msa0321130:intron | 40.0% |
| !! | CAAGCCTCCATTTTTATTGG+AGG | - | chr2_4:22214195-22214214 | None:intergenic | 40.0% |
| !! | CGTCAAGCCTCCATTTTTAT+TGG | - | chr2_4:22214198-22214217 | None:intergenic | 40.0% |
| TAAAAATGGAGGCTTGACGA+TGG | + | chr2_4:22214199-22214218 | Msa0321130:intron | 40.0% | |
| AAAAATGGAGGCTTGACGAT+GGG | + | chr2_4:22214200-22214219 | Msa0321130:intron | 40.0% | |
| GATTTCACCCAATAAGAGAG+TGG | + | chr2_4:22214871-22214890 | Msa0321130:intron | 40.0% | |
| ! | GGAGTAGGGTGTTAAAAAGA+AGG | + | chr2_4:22215045-22215064 | Msa0321130:intron | 40.0% |
| !! | TTGATTTGGTCTTGTGACCA+TGG | + | chr2_4:22215263-22215282 | Msa0321130:intron | 40.0% |
| ! | AACTTCGAGGTATTCTTCCA+TGG | - | chr2_4:22215283-22215302 | None:intergenic | 40.0% |
| !! | GGTCTTTGTGTTGGTCTTTA+TGG | - | chr2_4:22215760-22215779 | None:intergenic | 40.0% |
| ATGGGACAAACGTGGAAAAA+TGG | - | chr2_4:22216647-22216666 | None:intergenic | 40.0% | |
| CATGTGATGAGTGGTAGAAT+GGG | - | chr2_4:22216665-22216684 | None:intergenic | 40.0% | |
| TCATGTGATGAGTGGTAGAA+TGG | - | chr2_4:22216666-22216685 | None:intergenic | 40.0% | |
| TACCACTCATCACATGACAT+TGG | + | chr2_4:22216669-22216688 | Msa0321130:intron | 40.0% | |
| GAAACATCAAAAGAGTTGCG+TGG | + | chr2_4:22216706-22216725 | Msa0321130:intron | 40.0% | |
| TGTTTGCTTTAGCGGTGAAA+GGG | + | chr2_4:22217214-22217233 | Msa0321130:intron | 40.0% | |
| GACAAGACACAATGCCTATT+TGG | - | chr2_4:22217347-22217366 | None:intergenic | 40.0% | |
| TTTGAATGCGTTGAGTTTGG+GGG | - | chr2_4:22218076-22218095 | None:intergenic | 40.0% | |
| GTTTGAATGCGTTGAGTTTG+GGG | - | chr2_4:22218077-22218096 | None:intergenic | 40.0% | |
| CGTTTGAATGCGTTGAGTTT+GGG | - | chr2_4:22218078-22218097 | None:intergenic | 40.0% | |
| ACGTTTGAATGCGTTGAGTT+TGG | - | chr2_4:22218079-22218098 | None:intergenic | 40.0% | |
| !! | TCTCTCTCTCTAGGATTCTA+GGG | + | chr2_4:22218128-22218147 | Msa0321130:intron | 40.0% |
| TTCTGCACATATTGCTTGTG+GGG | + | chr2_4:22218652-22218671 | Msa0321130:intron | 40.0% | |
| TGTTTGCTTTAGCGGTGAAA+GGG | + | chr2_4:22217214-22217233 | Msa0321130:intron | 40.0% | |
| GAAGAAGTCGTGCGAAGAAA+AGG | + | chr2_4:22211849-22211868 | Msa0321130:CDS | 45.0% | |
| !! | GGTACTGGTGTAGTTGATGA+CGG | + | chr2_4:22211870-22211889 | Msa0321130:CDS | 45.0% |
| GAAACTAGGGATGGCAATAC+GGG | + | chr2_4:22212760-22212779 | Msa0321130:intron | 45.0% | |
| !!! | TTTTTTGGCGGGCTAATAGC+GGG | - | chr2_4:22212810-22212829 | None:intergenic | 45.0% |
| !!! | GTTTTTTGGCGGGCTAATAG+CGG | - | chr2_4:22212811-22212830 | None:intergenic | 45.0% |
| GCTATTAGCCCGCCAAAAAA+CGG | + | chr2_4:22212810-22212829 | Msa0321130:intron | 45.0% | |
| CTATTAGCCCGCCAAAAAAC+GGG | + | chr2_4:22212811-22212830 | Msa0321130:intron | 45.0% | |
| TATTAGCCCGCCAAAAAACG+GGG | + | chr2_4:22212812-22212831 | Msa0321130:intron | 45.0% | |
| GCTCTGATTCACTTGGGTTA+AGG | - | chr2_4:22213254-22213273 | None:intergenic | 45.0% | |
| TAAAAAGTCGGGTCATAGCG+GGG | - | chr2_4:22213368-22213387 | None:intergenic | 45.0% | |
| CTAAAAAGTCGGGTCATAGC+GGG | - | chr2_4:22213369-22213388 | None:intergenic | 45.0% | |
| GCTAAAAAGTCGGGTCATAG+CGG | - | chr2_4:22213370-22213389 | None:intergenic | 45.0% | |
| ! | GCTATGACCCGACTTTTTAG+CGG | + | chr2_4:22213369-22213388 | Msa0321130:intron | 45.0% |
| !! | CTATGACCCGACTTTTTAGC+GGG | + | chr2_4:22213370-22213389 | Msa0321130:intron | 45.0% |
| GTTAAGCCCGCTAAAAAGTC+GGG | - | chr2_4:22213379-22213398 | None:intergenic | 45.0% | |
| !!! | GACTTTTTAGCGGGCTTAAC+AGG | + | chr2_4:22213379-22213398 | Msa0321130:intron | 45.0% |
| !!! | CTTTTTAGCGGGCTTAACAG+GGG | + | chr2_4:22213381-22213400 | Msa0321130:intron | 45.0% |
| CTAAAAAAGCGGGTCATAGC+TGG | - | chr2_4:22213515-22213534 | None:intergenic | 45.0% | |
| !!! | GCTATGACCCGCTTTTTTAG+CGG | + | chr2_4:22213515-22213534 | Msa0321130:intron | 45.0% |
| !!! | CTATGACCCGCTTTTTTAGC+GGG | + | chr2_4:22213516-22213535 | Msa0321130:intron | 45.0% |
| GTTAAGCCCGCTAAAAAAGC+GGG | - | chr2_4:22213525-22213544 | None:intergenic | 45.0% | |
| !!! | GCTTTTTTAGCGGGCTTAAC+AGG | + | chr2_4:22213525-22213544 | Msa0321130:intron | 45.0% |
| !! | CCCGTTTAACCCGTCATTTT+AGG | - | chr2_4:22213596-22213615 | None:intergenic | 45.0% |
| !! | AAATGACGGGTTAAACGGGT+CGG | + | chr2_4:22213597-22213616 | Msa0321130:intron | 45.0% |
| TTCATGTAGGGGTGGCAAAA+CGG | - | chr2_4:22213637-22213656 | None:intergenic | 45.0% | |
| GAGCCCTCCAATAAAAATGG+AGG | + | chr2_4:22214188-22214207 | Msa0321130:intron | 45.0% | |
| ! | ACGATGGGTTTGGGAAAGTT+TGG | + | chr2_4:22214215-22214234 | Msa0321130:intron | 45.0% |
| !! | CAGAGTCCCTATTTTTCCCT+TGG | - | chr2_4:22214439-22214458 | None:intergenic | 45.0% |
| AATGCAATGAGCTGCAACGA+AGG | + | chr2_4:22214515-22214534 | Msa0321130:intron | 45.0% | |
| ! | TAGTGGTGGGACTCAATTAG+TGG | - | chr2_4:22215503-22215522 | None:intergenic | 45.0% |
| CTAGCACGTATCCTTATGAC+AGG | + | chr2_4:22215800-22215819 | Msa0321130:intron | 45.0% | |
| ! | AACCGAAGGAGGTACACTAT+TGG | + | chr2_4:22216051-22216070 | Msa0321130:intron | 45.0% |
| CACCAATAGTGTACCTCCTT+CGG | - | chr2_4:22216056-22216075 | None:intergenic | 45.0% | |
| AGTACCCCTACAACACACAA+TGG | - | chr2_4:22216542-22216561 | None:intergenic | 45.0% | |
| GTCCAATGTCATGTGATGAG+TGG | - | chr2_4:22216674-22216693 | None:intergenic | 45.0% | |
| GTGTTTGCTTTAGCGGTGAA+AGG | + | chr2_4:22217213-22217232 | Msa0321130:intron | 45.0% | |
| GTTTGCTTTAGCGGTGAAAG+GGG | + | chr2_4:22217215-22217234 | Msa0321130:intron | 45.0% | |
| TTTGCTTTAGCGGTGAAAGG+GGG | + | chr2_4:22217216-22217235 | Msa0321130:intron | 45.0% | |
| AATACCGCGTCTCAAAGCAA+CGG | - | chr2_4:22217296-22217315 | None:intergenic | 45.0% | |
| ! | TGAGCGTAACTCAGTTGGTA+TGG | - | chr2_4:22217704-22217723 | None:intergenic | 45.0% |
| !! | CTCTCTCTCTCTAGGATTCT+AGG | + | chr2_4:22218127-22218146 | Msa0321130:intron | 45.0% |
| CTTCTTCCTCAACAACTCAC+AGG | + | chr2_4:22218175-22218194 | Msa0321130:CDS | 45.0% | |
| ATCGAACCTGTGAGTTGTTG+AGG | - | chr2_4:22218184-22218203 | None:intergenic | 45.0% | |
| CATGTAGAGAGAGAGAGAGA+AGG | - | chr2_4:22218217-22218236 | None:intergenic | 45.0% | |
| TCTCTCTACATGTGCATGCA+TGG | + | chr2_4:22218225-22218244 | Msa0321130:intron | 45.0% | |
| GTGTTTGCTTTAGCGGTGAA+AGG | + | chr2_4:22217213-22217232 | Msa0321130:intron | 45.0% | |
| GTTTGCTTTAGCGGTGAAAG+GGG | + | chr2_4:22217215-22217234 | Msa0321130:intron | 45.0% | |
| TTTGCTTTAGCGGTGAAAGG+GGG | + | chr2_4:22217216-22217235 | Msa0321130:intron | 45.0% | |
| AATACCGCGTCTCAAAGCAA+CGG | - | chr2_4:22217296-22217315 | None:intergenic | 45.0% | |
| ! | GTCGTGCGAAGAAAAGGTAC+TGG | + | chr2_4:22211855-22211874 | Msa0321130:CDS | 50.0% |
| !! | TACTAGTGCTCTAAGGGCAC+TGG | - | chr2_4:22212042-22212061 | None:intergenic | 50.0% |
| GGAAAAGGAAGATGGTCGCA+AGG | + | chr2_4:22212480-22212499 | Msa0321130:intron | 50.0% | |
| TGGTGCACGAATTGGTCAGA+AGG | - | chr2_4:22212575-22212594 | None:intergenic | 50.0% | |
| TCATGTAGGGGTGGCAAAAC+GGG | - | chr2_4:22213636-22213655 | None:intergenic | 50.0% | |
| AGATGTGCTTCATGTAGGGG+TGG | - | chr2_4:22213645-22213664 | None:intergenic | 50.0% | |
| GGGTTTGGGAAAGTTTGGCT+CGG | + | chr2_4:22214220-22214239 | Msa0321130:intron | 50.0% | |
| !! | TTGGGAAAGTTTGGCTCGGA+AGG | + | chr2_4:22214224-22214243 | Msa0321130:intron | 50.0% |
| GGTGGGACTCAATTAGTGGT+AGG | - | chr2_4:22215499-22215518 | None:intergenic | 50.0% | |
| ! | CGGGCACTTGTTAAGGAGTT+AGG | - | chr2_4:22215608-22215627 | None:intergenic | 50.0% |
| ! | CGAAGGAGGTACACTATTGG+TGG | + | chr2_4:22216054-22216073 | Msa0321130:intron | 50.0% |
| GTGGTAGAATGGGACAAACG+TGG | - | chr2_4:22216655-22216674 | None:intergenic | 50.0% | |
| !! | GATTCCGTTGCTTTGAGACG+CGG | + | chr2_4:22217289-22217308 | Msa0321130:CDS | 50.0% |
| TCTCGTGAGCGTAACTCAGT+TGG | - | chr2_4:22217709-22217728 | None:intergenic | 50.0% | |
| AGTGTGTCTTGTGTGCACTC+AGG | - | chr2_4:22218039-22218058 | None:intergenic | 50.0% | |
| CTCTCTCTCTCTCTCTCTCT+AGG | + | chr2_4:22218107-22218126 | Msa0321130:intron | 50.0% | |
| !! | GATTCCGTTGCTTTGAGACG+CGG | + | chr2_4:22217289-22217308 | Msa0321130:CDS | 50.0% |
| !! | ATAGCGGGCTGGGCCTAAAT+GGG | - | chr2_4:22212795-22212814 | None:intergenic | 55.0% |
| !! | AATAGCGGGCTGGGCCTAAA+TGG | - | chr2_4:22212796-22212815 | None:intergenic | 55.0% |
| !! | TTTAGCGGGCTTAACAGGGG+CGG | + | chr2_4:22213384-22213403 | Msa0321130:intron | 55.0% |
| GGCGGGCCAACTATAGAGAT+GGG | + | chr2_4:22213402-22213421 | Msa0321130:intron | 55.0% | |
| TGGGCTCAAAATCTCACCCC+AGG | + | chr2_4:22213421-22213440 | Msa0321130:intron | 55.0% | |
| TGACCGAATTTAGGCGGCCT+GGG | - | chr2_4:22213441-22213460 | None:intergenic | 55.0% | |
| AAAGCGGGTCATAGCTGGGT+GGG | - | chr2_4:22213510-22213529 | None:intergenic | 55.0% | |
| AAAAGCGGGTCATAGCTGGG+TGG | - | chr2_4:22213511-22213530 | None:intergenic | 55.0% | |
| !! | TTTAGCGGGCTTAACAGGGG+CGG | + | chr2_4:22213384-22213403 | Msa0321130:intron | 55.0% |
| GGCGGGCCAACTATAGAGAT+GGG | + | chr2_4:22213402-22213421 | Msa0321130:intron | 55.0% | |
| TGGGCTCAAAATCTCACCCC+AGG | + | chr2_4:22213421-22213440 | Msa0321130:intron | 55.0% | |
| ! | TGGAGGCTTGACGATGGGTT+TGG | + | chr2_4:22214205-22214224 | Msa0321130:intron | 55.0% |
| ! | GGAGGCTTGACGATGGGTTT+GGG | + | chr2_4:22214206-22214225 | Msa0321130:intron | 55.0% |
| !! | GGAAAGTTTGGCTCGGAAGG+CGG | + | chr2_4:22214227-22214246 | Msa0321130:intron | 55.0% |
| AGGGGTCGGTCTCAATGATG+CGG | + | chr2_4:22214358-22214377 | Msa0321130:intron | 55.0% | |
| ! | GGTCTTGCGGGCACTTGTTA+AGG | - | chr2_4:22215615-22215634 | None:intergenic | 55.0% |
| CACTCAGGACGAGGATGATG+GGG | - | chr2_4:22218024-22218043 | None:intergenic | 55.0% | |
| GCACTCAGGACGAGGATGAT+GGG | - | chr2_4:22218025-22218044 | None:intergenic | 55.0% | |
| TGCACTCAGGACGAGGATGA+TGG | - | chr2_4:22218026-22218045 | None:intergenic | 55.0% | |
| TCTTGTGTGCACTCAGGACG+AGG | - | chr2_4:22218033-22218052 | None:intergenic | 55.0% | |
| !! | TAGCGGGCTGGGCCTAAATG+GGG | - | chr2_4:22212794-22212813 | None:intergenic | 60.0% |
| TAGCCCGCCAAAAAACGGGG+TGG | + | chr2_4:22212815-22212834 | Msa0321130:intron | 60.0% | |
| AGCCCGCCAAAAAACGGGGT+GGG | + | chr2_4:22212816-22212835 | Msa0321130:intron | 60.0% | |
| !!! | TGCCCCACCCCGTTTTTTGG+CGG | - | chr2_4:22212822-22212841 | None:intergenic | 60.0% |
| CCAAAAAACGGGGTGGGGCA+GGG | + | chr2_4:22212822-22212841 | Msa0321130:intron | 60.0% | |
| TTGAGCCCACCCCCTGAAGT+TGG | - | chr2_4:22212852-22212871 | None:intergenic | 60.0% | |
| TCACACCCTGCCCCGTCTAA+AGG | + | chr2_4:22212874-22212893 | Msa0321130:intron | 60.0% | |
| CGCTAGTCCGCCTTTAGACG+GGG | - | chr2_4:22212887-22212906 | None:intergenic | 60.0% | |
| CCGCTAGTCCGCCTTTAGAC+GGG | - | chr2_4:22212888-22212907 | None:intergenic | 60.0% | |
| !! | CCCGTCTAAAGGCGGACTAG+CGG | + | chr2_4:22212885-22212904 | Msa0321130:intron | 60.0% |
| CCCGCTAGTCCGCCTTTAGA+CGG | - | chr2_4:22212889-22212908 | None:intergenic | 60.0% | |
| !! | CCGTCTAAAGGCGGACTAGC+GGG | + | chr2_4:22212886-22212905 | Msa0321130:intron | 60.0% |
| ! | AAGTCGGGTCATAGCGGGGT+GGG | - | chr2_4:22213364-22213383 | None:intergenic | 60.0% |
| ! | AAAGTCGGGTCATAGCGGGG+TGG | - | chr2_4:22213365-22213384 | None:intergenic | 60.0% |
| !! | TTAGCGGGCTTAACAGGGGC+GGG | + | chr2_4:22213385-22213404 | Msa0321130:intron | 60.0% |
| GGGCGGGCCAACTATAGAGA+TGG | + | chr2_4:22213401-22213420 | Msa0321130:intron | 60.0% | |
| CACCCCAGGCCGCCTAAATT+CGG | + | chr2_4:22213435-22213454 | Msa0321130:intron | 60.0% | |
| GACCGAATTTAGGCGGCCTG+GGG | - | chr2_4:22213440-22213459 | None:intergenic | 60.0% | |
| GTGACCGAATTTAGGCGGCC+TGG | - | chr2_4:22213442-22213461 | None:intergenic | 60.0% | |
| AAGCGGGTCATAGCTGGGTG+GGG | - | chr2_4:22213509-22213528 | None:intergenic | 60.0% | |
| !! | TTAGCGGGCTTAACAGGGGC+GGG | + | chr2_4:22213385-22213404 | Msa0321130:intron | 60.0% |
| GGGCGGGCCAACTATAGAGA+TGG | + | chr2_4:22213401-22213420 | Msa0321130:intron | 60.0% | |
| !! | CCGTCATTTTAGGCGGCCTG+GGG | - | chr2_4:22213586-22213605 | None:intergenic | 60.0% |
| CCCCAGGCCGCCTAAAATGA+CGG | + | chr2_4:22213583-22213602 | Msa0321130:intron | 60.0% | |
| !! | CCCGTCATTTTAGGCGGCCT+GGG | - | chr2_4:22213587-22213606 | None:intergenic | 60.0% |
| CCCAGGCCGCCTAAAATGAC+GGG | + | chr2_4:22213584-22213603 | Msa0321130:intron | 60.0% | |
| !! | ACCCGTCATTTTAGGCGGCC+TGG | - | chr2_4:22213588-22213607 | None:intergenic | 60.0% |
| GATGCGGTCGCTGATCAGAG+AGG | + | chr2_4:22214374-22214393 | Msa0321130:intron | 60.0% | |
| !! | CAGGACGAGGATGATGGGGA+TGG | - | chr2_4:22218020-22218039 | None:intergenic | 60.0% |
| !! | TGGCGGGCTAATAGCGGGCT+GGG | - | chr2_4:22212805-22212824 | None:intergenic | 65.0% |
| !! | TTGGCGGGCTAATAGCGGGC+TGG | - | chr2_4:22212806-22212825 | None:intergenic | 65.0% |
| GCCCGCCAAAAAACGGGGTG+GGG | + | chr2_4:22212817-22212836 | Msa0321130:intron | 65.0% | |
| !!! | GCCCCACCCCGTTTTTTGGC+GGG | - | chr2_4:22212821-22212840 | None:intergenic | 65.0% |
| GCCAAAAAACGGGGTGGGGC+AGG | + | chr2_4:22212821-22212840 | Msa0321130:intron | 65.0% | |
| !!! | CCCTGCCCCACCCCGTTTTT+TGG | - | chr2_4:22212825-22212844 | None:intergenic | 65.0% |
| AAAAACGGGGTGGGGCAGGG+CGG | + | chr2_4:22212825-22212844 | Msa0321130:intron | 65.0% | |
| CACCCTGCCCCGTCTAAAGG+CGG | + | chr2_4:22212877-22212896 | Msa0321130:intron | 65.0% | |
| GTCCGCCTTTAGACGGGGCA+GGG | - | chr2_4:22212882-22212901 | None:intergenic | 65.0% | |
| AGTCCGCCTTTAGACGGGGC+AGG | - | chr2_4:22212883-22212902 | None:intergenic | 65.0% | |
| GGTTAAACGGGTCGGCCCGA+CGG | + | chr2_4:22213605-22213624 | Msa0321130:intron | 65.0% | |
| GTAGGGGTGGCAAAACGGGC+CGG | - | chr2_4:22213632-22213651 | None:intergenic | 65.0% | |
| TGGGCCTAAATGGGGCGGGC+TGG | - | chr2_4:22212786-22212805 | None:intergenic | 70.0% | |
| GGGCTGGGCCTAAATGGGGC+GGG | - | chr2_4:22212790-22212809 | None:intergenic | 70.0% | |
| ! | CGGGCTGGGCCTAAATGGGG+CGG | - | chr2_4:22212791-22212810 | None:intergenic | 70.0% |
| AAAACGGGGTGGGGCAGGGC+GGG | + | chr2_4:22212826-22212845 | Msa0321130:intron | 70.0% | |
| GGCAGGGCGGGCCAACTTCA+GGG | + | chr2_4:22212838-22212857 | Msa0321130:intron | 70.0% | |
| GCAGGGCGGGCCAACTTCAG+GGG | + | chr2_4:22212839-22212858 | Msa0321130:intron | 70.0% | |
| CAGGGCGGGCCAACTTCAGG+GGG | + | chr2_4:22212840-22212859 | Msa0321130:intron | 70.0% | |
| GCGGGCCAACTTCAGGGGGT+GGG | + | chr2_4:22212844-22212863 | Msa0321130:intron | 70.0% | |
| !! | GGGTGGGCAGGCTAGCCTAC+GGG | - | chr2_4:22213348-22213367 | None:intergenic | 70.0% |
| !! | GGGGTGGGCAGGCTAGCCTA+CGG | - | chr2_4:22213349-22213368 | None:intergenic | 70.0% |
| GGGTCATAGCTGGGTGGGGC+AGG | - | chr2_4:22213505-22213524 | None:intergenic | 70.0% | |
| GCAAAACGGGCCGGTCCGTC+GGG | - | chr2_4:22213623-22213642 | None:intergenic | 70.0% | |
| GGCAAAACGGGCCGGTCCGT+CGG | - | chr2_4:22213624-22213643 | None:intergenic | 70.0% | |
| CGGGCCAGCCCGCCCCATTT+AGG | + | chr2_4:22212779-22212798 | Msa0321130:intron | 75.0% | |
| GGGCAGGGCGGGCCAACTTC+AGG | + | chr2_4:22212837-22212856 | Msa0321130:intron | 75.0% | |
| GGCGGGCCAACTTCAGGGGG+TGG | + | chr2_4:22212843-22212862 | Msa0321130:intron | 75.0% | |
| ! | CGGGTCATAGCGGGGTGGGC+AGG | - | chr2_4:22213360-22213379 | None:intergenic | 75.0% |
| AACGGGTCGGCCCGACGGAC+CGG | + | chr2_4:22213610-22213629 | Msa0321130:intron | 75.0% | |
| !! | GGTGGGGCAGGCTAGCCCGC+GGG | - | chr2_4:22213493-22213512 | None:intergenic | 80.0% |
| !! | GGGTGGGGCAGGCTAGCCCG+CGG | - | chr2_4:22213494-22213513 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 22211738 | 22219111 | 22211738 | ID=Msa0321130;Name=Msa0321130 |
| chr2_4 | mRNA | 22211738 | 22219111 | 22211738 | ID=Msa0321130-mRNA-1;Parent=Msa0321130;Name=Msa0321130-mRNA-1;_AED=0.92;_eAED=0.92;_QI=0|0|0|0.25|1|1|4|0|132 |
| chr2_4 | exon | 22211738 | 22211891 | 22211738 | ID=Msa0321130-mRNA-1:exon:8175;Parent=Msa0321130-mRNA-1 |
| chr2_4 | exon | 22217226 | 22217310 | 22217226 | ID=Msa0321130-mRNA-1:exon:8176;Parent=Msa0321130-mRNA-1 |
| chr2_4 | exon | 22218141 | 22218196 | 22218141 | ID=Msa0321130-mRNA-1:exon:8177;Parent=Msa0321130-mRNA-1 |
| chr2_4 | exon | 22219008 | 22219111 | 22219008 | ID=Msa0321130-mRNA-1:exon:8178;Parent=Msa0321130-mRNA-1 |
| chr2_4 | CDS | 22211738 | 22211891 | 22211738 | ID=Msa0321130-mRNA-1:cds;Parent=Msa0321130-mRNA-1 |
| chr2_4 | CDS | 22217226 | 22217310 | 22217226 | ID=Msa0321130-mRNA-1:cds;Parent=Msa0321130-mRNA-1 |
| chr2_4 | CDS | 22218141 | 22218196 | 22218141 | ID=Msa0321130-mRNA-1:cds;Parent=Msa0321130-mRNA-1 |
| chr2_4 | CDS | 22219008 | 22219111 | 22219008 | ID=Msa0321130-mRNA-1:cds;Parent=Msa0321130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
