AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0078480

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0078480 MtrunA17_Chr1g0189091 94.737 722 31 3 2 719 458 1176 0.0 1338
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0078480 AT1G32810.2 46.791 374 165 9 331 695 688 1036 2.60e-68 243

Find 334 sgRNAs with CRISPR-Local

Find 605 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACCCTAATTTACGAAATT+TGG 0.066946 1_2:+56043383 None:intergenic
AACTCCAAATTTCGTAAATT+AGG 0.099475 1_2:-56043387 Msa0078480:five_prime_UTR
CGTTGTTCTCGTTACGTTAA+AGG 0.115003 1_2:-56043167 Msa0078480:five_prime_UTR
ACGCAGGCGGCTGGCTCTTC+AGG 0.118354 1_2:-56036295 Msa0078480:CDS
GGAGTTTAATTGAGAAATTT+AGG 0.192388 1_2:+56043404 None:intergenic
TTGCAGTAATTTGCACTTCT+TGG 0.196856 1_2:-56036065 Msa0078480:three_prime_UTR
CGAGCTTTACGCTTGCCTTT+AGG 0.236141 1_2:+56036321 None:intergenic
TCTCCTTCTTAACCGCATTA+TGG 0.239396 1_2:+56042559 None:intergenic
ATCCGTTTAGCTTCGTCTTC+TGG 0.248514 1_2:+56038751 None:intergenic
GAGCTTTACGCTTGCCTTTA+GGG 0.253123 1_2:+56036322 None:intergenic
ACTCCAAATTTCGTAAATTA+GGG 0.255970 1_2:-56043386 Msa0078480:five_prime_UTR
TTAGCTCCATGCTTTGTAAA+AGG 0.259371 1_2:+56039667 None:intergenic
CTTACCTTTATGTGTAAATA+AGG 0.260413 1_2:-56039986 Msa0078480:CDS
TGTTACGACTTTGGTTGATA+TGG 0.274402 1_2:-56042655 Msa0078480:five_prime_UTR
AGTTCATTGGTATGACTATC+AGG 0.276222 1_2:+56039931 None:intergenic
ACATCTGGATTTGCTTGCTT+TGG 0.278660 1_2:+56039499 None:intergenic
GTAATGGAATTGCTTCTTCT+AGG 0.283051 1_2:-56042995 Msa0078480:five_prime_UTR
CAGGTGGCTAAATATCTAAT+TGG 0.288586 1_2:-56036096 Msa0078480:three_prime_UTR
CATTCTTTGTATGAATGTTA+TGG 0.302807 1_2:+56039638 None:intergenic
TGAATATTCTACATGCTATA+AGG 0.304565 1_2:-56043451 Msa0078480:five_prime_UTR
CCCACCTTATTTACACATAA+AGG 0.305362 1_2:+56039982 None:intergenic
TCCGACAAAGACGATTTCTT+TGG 0.305436 1_2:-56043042 Msa0078480:five_prime_UTR
TGGAGGAAAGGATAACTATT+TGG 0.311765 1_2:-56038974 Msa0078480:intron
GAAAGTGGAACGAGTAAGTT+AGG 0.313802 1_2:-56042603 Msa0078480:five_prime_UTR
TACTGAAAACTAAACTTCTT+AGG 0.323755 1_2:+56042810 None:intergenic
GGAAGAGAGGGTTCATGTTC+AGG 0.324299 1_2:-56042922 Msa0078480:five_prime_UTR
GGGGAGTGCTTAATTTCTTC+AGG 0.331520 1_2:-56036115 Msa0078480:exon
CGCGGAGGCCGTTTAAGCTT+TGG 0.332311 1_2:-56042959 Msa0078480:five_prime_UTR
GAGTTTAATTGAGAAATTTA+GGG 0.332545 1_2:+56043405 None:intergenic
TCTTCTGTCTGAGGACTCAT+AGG 0.346153 1_2:+56040240 None:intergenic
TGCAAGAGAATGAGGATAAT+GGG 0.355339 1_2:-56042734 Msa0078480:five_prime_UTR
ACTGAAGAATCTGAAGATAA+TGG 0.356788 1_2:-56036411 Msa0078480:CDS
GCATCAATGCACCATCAAAA+AGG 0.361706 1_2:-56039394 Msa0078480:CDS
GTGCAAGAGAATGAGGATAA+TGG 0.365186 1_2:-56042735 Msa0078480:five_prime_UTR
AAGCTGTTCTTGATTGTTTG+AGG 0.366781 1_2:-56037635 Msa0078480:CDS
TCAATGATGGTGTGTGGCTC+TGG 0.376785 1_2:+56039281 None:intergenic
AGCTACCTGTTTGGCGTGCA+CGG 0.377996 1_2:+56039049 None:intergenic
ATGAAGTTGGAGACGTCTTT+CGG 0.383303 1_2:+56039752 None:intergenic
CATTCCTTTGCAGTGTGGCC+TGG 0.386428 1_2:-56036557 Msa0078480:intron
ACAGATCGCGGCGGCGGTGG+TGG 0.386705 1_2:-56043341 Msa0078480:five_prime_UTR
CCAGGTAAGGTGTGATGAAC+TGG 0.389138 1_2:+56038475 None:intergenic
AGTATAGGGAGTTTCCTTCT+TGG 0.391189 1_2:-56042791 Msa0078480:five_prime_UTR
AAGGATGTCAGGAGACAAAA+AGG 0.398545 1_2:-56036261 Msa0078480:CDS
CTATCAGAAGTCTTCCTCTT+GGG 0.398794 1_2:+56042348 None:intergenic
GTTCATGTTCAGGGGATGCC+TGG 0.398974 1_2:-56042912 Msa0078480:five_prime_UTR
CATTAGCATGTTTGTAGCAC+TGG 0.400038 1_2:+56039011 None:intergenic
TCTGATCCCACATCTGATAT+TGG 0.400326 1_2:-56040036 Msa0078480:CDS
TGGGGATCCTGAGTTGTTTG+AGG 0.400920 1_2:-56042889 Msa0078480:five_prime_UTR
CAAACTCCCTTCACTAGTAT+TGG 0.407968 1_2:+56036203 None:intergenic
ATATCAACCAAAGTCGTAAC+AGG 0.408197 1_2:+56042657 None:intergenic
AGCTCGAAAACGCAGGCGGC+TGG 0.413281 1_2:-56036304 Msa0078480:CDS
GACGATTTCTTTGGAGAGAA+GGG 0.413823 1_2:-56043033 Msa0078480:five_prime_UTR
TCTATCAGAACTCCTCCTCT+TGG 0.413907 1_2:+56042383 None:intergenic
GGGGATCCTGAGTTGTTTGA+GGG 0.415902 1_2:-56042888 Msa0078480:five_prime_UTR
TCGTCCGGTGGTGGATCCAT+CGG 0.418211 1_2:+56043293 None:intergenic
CGCTCTCTTACATACTTCCT+TGG 0.419475 1_2:+56039580 None:intergenic
TTCGTTATCTAAACCATCCC+TGG 0.419596 1_2:-56039458 Msa0078480:CDS
TGGTTCTGCACCAGAACATA+TGG 0.422386 1_2:-56040211 Msa0078480:CDS
TTATGTTGTTGAAATTGAAA+TGG 0.424456 1_2:+56043591 None:intergenic
GTGGCTCTGGTTCAACTTAG+AGG 0.424980 1_2:+56039294 None:intergenic
CTATCAGAACTCCTCCTCTT+GGG 0.428682 1_2:+56042384 None:intergenic
CGCAGGCGGCTGGCTCTTCA+GGG 0.429908 1_2:-56036294 Msa0078480:CDS
ACGAATGGGTCGACGGTTCA+TGG 0.430074 1_2:-56043274 Msa0078480:five_prime_UTR
ATGTTCAGGGGATGCCTGGT+GGG 0.430907 1_2:-56042908 Msa0078480:five_prime_UTR
GGGATCGAGGCAGGGTAAGA+AGG 0.432075 1_2:-56042634 Msa0078480:five_prime_UTR
TGAGAATGAAAATGATGATA+AGG 0.432231 1_2:-56042760 Msa0078480:five_prime_UTR
GGTTGATATGGGATCGAGGC+AGG 0.432644 1_2:-56042643 Msa0078480:five_prime_UTR
AGGATGAATTATCGAAAGAT+AGG 0.433021 1_2:-56042491 Msa0078480:five_prime_UTR
GAAGAGCAGTAAAGGATGTC+AGG 0.433354 1_2:-56036272 Msa0078480:CDS
GTAGCACTGGTACCTGTTTG+TGG 0.435629 1_2:+56039024 None:intergenic
GCTACCTGTTTGGCGTGCAC+GGG 0.436273 1_2:+56039050 None:intergenic
ATATCAGTCCAAAGCTTAAA+CGG 0.438819 1_2:+56042951 None:intergenic
CACCTGTGATGCAAAACAAT+TGG 0.439631 1_2:-56041606 Msa0078480:five_prime_UTR
GTTACGACTTTGGTTGATAT+GGG 0.442633 1_2:-56042654 Msa0078480:five_prime_UTR
AAAATTACCAGGTAGTTCAT+TGG 0.443899 1_2:+56039918 None:intergenic
GTTTGCAATGGCAGGGGTTG+TGG 0.444591 1_2:+56038594 None:intergenic
TGAACAGAATCTCTCACATC+TGG 0.445252 1_2:+56039484 None:intergenic
TTTGAGGAACCGACATGAAT+GGG 0.446300 1_2:-56037619 Msa0078480:CDS
GTTTGAGGAACCGACATGAA+TGG 0.446306 1_2:-56037620 Msa0078480:CDS
GAACCGCTGTTTGCAATGGC+AGG 0.446397 1_2:+56038586 None:intergenic
AACCAGAAGACGAAGCTAAA+CGG 0.446567 1_2:-56038753 Msa0078480:CDS
ATTTACACATAAAGGTAAGC+TGG 0.447485 1_2:+56039990 None:intergenic
TCTATCAGAAGTCTTCCTCT+TGG 0.448862 1_2:+56042347 None:intergenic
CATAACATTCATACAAAGAA+TGG 0.449462 1_2:-56039637 Msa0078480:CDS
GGTTCAACTTAGAGGAAGAA+TGG 0.449979 1_2:+56039302 None:intergenic
TCCAAAGAAATCGTCTTTGT+CGG 0.451016 1_2:+56043041 None:intergenic
TGAAGGGAGTTTGTTTAGTG+AGG 0.451353 1_2:-56036193 Msa0078480:CDS
TCATCTGATGTACTTCCTGC+TGG 0.455594 1_2:+56036144 None:intergenic
AACCAACGACACTTGGAGTC+TGG 0.455847 1_2:+56039431 None:intergenic
TAGGAAAAGGCGTAGTAAGC+TGG 0.455943 1_2:-56036436 Msa0078480:CDS
GTACCCCGTGCACGCCAAAC+AGG 0.458478 1_2:-56039054 Msa0078480:CDS
ACAGGTAGCTTGCCACAAAC+AGG 0.460558 1_2:-56039036 Msa0078480:CDS
AGGTTCCTTTGAAACACAAA+AGG 0.462467 1_2:-56039866 Msa0078480:CDS
GGATCCACCACCGGACGAAT+GGG 0.462593 1_2:-56043288 Msa0078480:five_prime_UTR
TCTGTCTGAGTCTGTCAAGT+GGG 0.463300 1_2:-56036020 Msa0078480:three_prime_UTR
TAATGGAATTGCTTCTTCTA+GGG 0.463404 1_2:-56042994 Msa0078480:five_prime_UTR
AAACAAGGGCGGAGATTGCT+TGG 0.464950 1_2:-56040301 Msa0078480:CDS
CCAGTTCATCACACCTTACC+TGG 0.465373 1_2:-56038475 Msa0078480:intron
TACAAGGATGCAACTAGAGA+TGG 0.466111 1_2:-56038793 Msa0078480:CDS
ACTTCACATTCTTCTAAAGC+AGG 0.466657 1_2:-56042300 Msa0078480:intron
CCCAACTTAAGAAAACATAA+TGG 0.467370 1_2:-56037687 Msa0078480:CDS
GGCGGTGGTGGGAGAATGAA+AGG 0.468840 1_2:-56043329 Msa0078480:five_prime_UTR
ACTTTGCATTGTCCAGAGCT+TGG 0.472456 1_2:+56040150 None:intergenic
AGGTGGCTAAATATCTAATT+GGG 0.473053 1_2:-56036095 Msa0078480:three_prime_UTR
GAAGAGAGGGTTCATGTTCA+GGG 0.473759 1_2:-56042921 Msa0078480:five_prime_UTR
TGTAACCAGCATCCAAGCTC+TGG 0.474323 1_2:-56040162 Msa0078480:CDS
TATCTTCAGATTTGAAGTCC+TGG 0.477877 1_2:+56039704 None:intergenic
CAGTTCATGATTGATGAAGT+TGG 0.478346 1_2:+56039739 None:intergenic
CTAGGGTTGCGTCGTGTTCG+CGG 0.479128 1_2:-56042977 Msa0078480:five_prime_UTR
CTCAGAAACAAAAGATGGTA+TGG 0.479648 1_2:-56039839 Msa0078480:CDS
ATGTCATCCTTGAAAACCTT+CGG 0.480712 1_2:+56041563 None:intergenic
TCGACCCATTCGTCCGGTGG+TGG 0.481651 1_2:+56043284 None:intergenic
TGTCCATAATGCGGTTAAGA+AGG 0.482531 1_2:-56042562 Msa0078480:five_prime_UTR
TTCAGACAAATACTAGGAAA+AGG 0.482854 1_2:-56036449 Msa0078480:intron
GAGAATGAGGATAATGGGGC+TGG 0.483034 1_2:-56042729 Msa0078480:five_prime_UTR
GAAGTCGCCTGTTACGACTT+TGG 0.483282 1_2:-56042664 Msa0078480:five_prime_UTR
GAAGAATTTAATGTTGGAGA+AGG 0.485441 1_2:+56039256 None:intergenic
AGAAGGAGAGGAATTTGCTT+AGG 0.485883 1_2:-56042545 Msa0078480:five_prime_UTR
TTTGTGGCAAGCTACCTGTT+TGG 0.488486 1_2:+56039040 None:intergenic
CAATATTTCAGACAAATACT+AGG 0.489650 1_2:-56036455 Msa0078480:intron
CATGTTCAGGGGATGCCTGG+TGG 0.491065 1_2:-56042909 Msa0078480:five_prime_UTR
AGCATTGAAGAATTTAATGT+TGG 0.492089 1_2:+56039250 None:intergenic
CGGTTGTCTCATGCTTGAAA+AGG 0.494002 1_2:+56035923 None:intergenic
GTAAATAAGGTGGGTGATGT+TGG 0.494240 1_2:-56039973 Msa0078480:CDS
TCAGATTTGAAGTCCTGGCT+TGG 0.497518 1_2:+56039709 None:intergenic
AACCGCTGTTTGCAATGGCA+GGG 0.498365 1_2:+56038587 None:intergenic
AACTTCTGATAGAGAGGAGG+TGG 0.498847 1_2:-56042445 Msa0078480:five_prime_UTR
CGTCCGGTGGTGGATCCATC+GGG 0.500068 1_2:+56043294 None:intergenic
AGACGATTTCTTTGGAGAGA+AGG 0.500714 1_2:-56043034 Msa0078480:five_prime_UTR
TCACTAGAACCAACGACACT+TGG 0.500751 1_2:+56039424 None:intergenic
TAACGCTTCTGAAGACTCTT+CGG 0.500775 1_2:+56041427 None:intergenic
TTCAGCTTCACCTTCTCCGA+TGG 0.501776 1_2:-56043545 Msa0078480:five_prime_UTR
ACCTTTATGTGTAAATAAGG+TGG 0.503515 1_2:-56039983 Msa0078480:CDS
TAGGAGTGGGAAGAAGAAGC+GGG 0.503873 1_2:-56042472 Msa0078480:five_prime_UTR
TAAACATTTCTTAACAATTG+TGG 0.507789 1_2:-56035763 Msa0078480:three_prime_UTR
CACTTTACCAATATCAGATG+TGG 0.507901 1_2:+56040029 None:intergenic
GTAACTTGTAAGTTATTCAA+AGG 0.508673 1_2:-56035881 Msa0078480:three_prime_UTR
CAAACAATCAAGAACAGCTT+GGG 0.509477 1_2:+56037638 None:intergenic
CTCTGGACAATGCAAAGTTA+AGG 0.509790 1_2:-56040145 Msa0078480:CDS
CACTTGGAGTCTGGTGACCC+AGG 0.509979 1_2:+56039440 None:intergenic
GCTTTGGACTGATATACCTA+TGG 0.510874 1_2:-56042943 Msa0078480:five_prime_UTR
AAAACAAGACACAGCGTATG+TGG 0.511544 1_2:-56038692 Msa0078480:CDS
CCGACATGAATGGGCAAGGT+TGG 0.512400 1_2:-56037610 Msa0078480:CDS
TGACAAATTTCGATCCTCAC+GGG 0.513223 1_2:+56038555 None:intergenic
CTGTCTGAGTCTGTCAAGTG+GGG 0.514529 1_2:-56036019 Msa0078480:three_prime_UTR
TGAAAGGAAGCTACCAGGTA+AGG 0.514989 1_2:+56038462 None:intergenic
ACAAGGCGTAGTCATTCTGC+TGG 0.515291 1_2:-56041392 Msa0078480:five_prime_UTR
GTTCAACTTAGAGGAAGAAT+GGG 0.517430 1_2:+56039303 None:intergenic
TGTTCAGGGGATGCCTGGTG+GGG 0.518582 1_2:-56042907 Msa0078480:five_prime_UTR
TACAGAACAGATCGCGGCGG+CGG 0.520072 1_2:-56043347 Msa0078480:five_prime_UTR
ATTTCTTGCTTCTACAAACA+AGG 0.521639 1_2:-56040316 Msa0078480:CDS
TCTTCAGGGAAGAGCAGTAA+AGG 0.521857 1_2:-56036280 Msa0078480:CDS
GAAGTTCAAGTTGACAGAAT+AGG 0.522359 1_2:-56036168 Msa0078480:CDS
TGGATCCACCACCGGACGAA+TGG 0.523746 1_2:-56043289 Msa0078480:five_prime_UTR
GTTGACAGAATAGGTCCAGC+AGG 0.524702 1_2:-56036159 Msa0078480:CDS
GCGAGCATCGGTTGGAGGAA+AGG 0.525751 1_2:-56038986 Msa0078480:CDS
AGAATGAGGATAATGGGGCT+GGG 0.526709 1_2:-56042728 Msa0078480:five_prime_UTR
TAAGGGTGTGCAAGAGAATG+AGG 0.527932 1_2:-56042742 Msa0078480:five_prime_UTR
GAGAATGAAAATGATGATAA+GGG 0.528388 1_2:-56042759 Msa0078480:five_prime_UTR
TTTCGACGATGGCGAAGAGA+TGG 0.529901 1_2:-56043225 Msa0078480:five_prime_UTR
TTCTCATTCTCATACCAAGA+AGG 0.530756 1_2:+56042777 None:intergenic
GATGATGATACAGCAACTGC+TGG 0.532716 1_2:-56038502 Msa0078480:CDS
AGAACAGATCGCGGCGGCGG+TGG 0.533283 1_2:-56043344 Msa0078480:five_prime_UTR
ACTCTGCAGTGCTGTGCTAC+CGG 0.533580 1_2:-56037823 Msa0078480:intron
GGTTCCTTTGAAACACAAAA+GGG 0.534078 1_2:-56039865 Msa0078480:CDS
CCGCAGTTGTGGAAATGTAC+CGG 0.535180 1_2:-56042840 Msa0078480:five_prime_UTR
ATAGGAGTGGGAAGAAGAAG+CGG 0.535286 1_2:-56042473 Msa0078480:five_prime_UTR
CGCAGTTGTGGAAATGTACC+GGG 0.536087 1_2:-56042839 Msa0078480:five_prime_UTR
CCATTCTCCAATACTAGTGA+AGG 0.537670 1_2:-56036210 Msa0078480:CDS
ATGAAGCGAGCATCGGTTGG+AGG 0.538988 1_2:-56038991 Msa0078480:CDS
TTACTCGAATGAACAACAAA+CGG 0.541633 1_2:+56042522 None:intergenic
AAAGTGGAACGAGTAAGTTA+GGG 0.541809 1_2:-56042602 Msa0078480:five_prime_UTR
ACAATCAAGAACAGCTTGGG+AGG 0.542202 1_2:+56037641 None:intergenic
CTGCGCAACCTCAGTTTCCT+CGG 0.542649 1_2:+56043079 None:intergenic
AAATCTGCAAAAGAGACTGA+TGG 0.542709 1_2:-56036375 Msa0078480:CDS
TTTACACATAAAGGTAAGCT+GGG 0.544051 1_2:+56039991 None:intergenic
GTTGTTATTTGATACCTCCA+TGG 0.544905 1_2:+56041460 None:intergenic
CGATTTCTTTGGAGAGAAGG+GGG 0.545317 1_2:-56043031 Msa0078480:five_prime_UTR
CCTTTATGTGTAAATAAGGT+GGG 0.548088 1_2:-56039982 Msa0078480:CDS
CAGATCGCGGCGGCGGTGGT+GGG 0.548454 1_2:-56043340 Msa0078480:five_prime_UTR
TTCAATGCTGAGTGATGAAG+AGG 0.549009 1_2:-56039236 Msa0078480:intron
CCTTCACTAGTATTGGAGAA+TGG 0.550699 1_2:+56036210 None:intergenic
GAAGCTTCTGTAAAGGAAGA+AGG 0.551005 1_2:-56038667 Msa0078480:CDS
GAACCGTCGACCCATTCGTC+CGG 0.551144 1_2:+56043278 None:intergenic
AGTACATCAGATGATGAGAC+GGG 0.553797 1_2:-56036135 Msa0078480:CDS
TGTGGAAGAAGCTTCTGTAA+AGG 0.555351 1_2:-56038674 Msa0078480:CDS
CTAATGAAGCGAGCATCGGT+TGG 0.555557 1_2:-56038994 Msa0078480:CDS
GGGAATGGTAATAGGAGTAA+TGG 0.555778 1_2:-56043011 Msa0078480:five_prime_UTR
TCAAACAATCAAGAACAGCT+TGG 0.555827 1_2:+56037637 None:intergenic
GGAGTCTGGTGACCCAGGGA+TGG 0.556570 1_2:+56039445 None:intergenic
TTAAGCCTTTCAGCTTTCTG+TGG 0.557448 1_2:+56039337 None:intergenic
GAACTGCAAATCACCAAGCC+AGG 0.557800 1_2:-56039722 Msa0078480:CDS
ATTGTCCAGAGCTTGGATGC+TGG 0.558111 1_2:+56040157 None:intergenic
AATTATCGAAAGATAGGAGT+GGG 0.559178 1_2:-56042485 Msa0078480:five_prime_UTR
GAAAGAGGTTAATAATATGT+TGG 0.560178 1_2:-56042688 Msa0078480:five_prime_UTR
TAGTTCACCTCGTGTACCAC+GGG 0.560851 1_2:-56039076 Msa0078480:CDS
GAGAGGATGTAGATCACAAG+AGG 0.563845 1_2:-56042326 Msa0078480:five_prime_UTR
ATCTATCTATCCATCGGAGA+AGG 0.564374 1_2:+56043535 None:intergenic
TTCTCATGGAAAAGAAGTCG+AGG 0.564664 1_2:-56039896 Msa0078480:CDS
GGATCGAGGCAGGGTAAGAA+GGG 0.565722 1_2:-56042633 Msa0078480:five_prime_UTR
AATCTGCAAAAGAGACTGAT+GGG 0.565783 1_2:-56036374 Msa0078480:CDS
AATCAATGAGATAATGAGCA+AGG 0.566744 1_2:-56037868 Msa0078480:CDS
GAATGAGGATAATGGGGCTG+GGG 0.567370 1_2:-56042727 Msa0078480:five_prime_UTR
CCGTCGACCCATTCGTCCGG+TGG 0.567949 1_2:+56043281 None:intergenic
GAGGAGGAGTTCTGATAGAG+AGG 0.569321 1_2:-56042379 Msa0078480:five_prime_UTR
GTTGGTTGATCGCGGTCCAA+AGG 0.570281 1_2:-56037592 Msa0078480:intron
ATGACAAATTTCGATCCTCA+CGG 0.570618 1_2:+56038554 None:intergenic
GAGGAAGACTTCTGATAGAG+AGG 0.570954 1_2:-56042343 Msa0078480:five_prime_UTR
TTCTGTCTGAGTCTGTCAAG+TGG 0.571361 1_2:-56036021 Msa0078480:three_prime_UTR
ACTTTACCAATATCAGATGT+GGG 0.571937 1_2:+56040030 None:intergenic
TGTCTGAGTCTGTCAAGTGG+GGG 0.573185 1_2:-56036018 Msa0078480:three_prime_UTR
CTGATATACCTATGGAAGAG+AGG 0.573991 1_2:-56042935 Msa0078480:five_prime_UTR
CACACACACATGCACGCGAT+CGG 0.574833 1_2:-56043509 Msa0078480:five_prime_UTR
CTTCTGTCTGAGGACTCATA+GGG 0.574868 1_2:+56040241 None:intergenic
CACCAGACTCCAAGTGTCGT+TGG 0.575969 1_2:-56039433 Msa0078480:CDS
ATGAGATAATGAGCAAGGGC+AGG 0.576359 1_2:-56037863 Msa0078480:CDS
AGAAATTGCGTTGTGATGCG+AGG 0.576600 1_2:+56043473 None:intergenic
AATGGAAGTTGTACGAATGA+TGG 0.578577 1_2:-56039619 Msa0078480:CDS
GTCTGAGTCTGTCAAGTGGG+GGG 0.578598 1_2:-56036017 Msa0078480:three_prime_UTR
AAGTACATCAGATGATGAGA+CGG 0.578611 1_2:-56036136 Msa0078480:CDS
TATTGTTCTCCGCTCCGACA+CGG 0.579173 1_2:+56043102 None:intergenic
GTGTTTATCTATCTATCCAT+CGG 0.579842 1_2:+56043529 None:intergenic
GACAAATTTCGATCCTCACG+GGG 0.580129 1_2:+56038556 None:intergenic
TTATGGAGACAGAGGTCCGA+AGG 0.580485 1_2:-56041579 Msa0078480:five_prime_UTR
ACATGAACCCTCTCTTCCAT+AGG 0.580837 1_2:+56042927 None:intergenic
ACAAGGATGCAACTAGAGAT+GGG 0.581391 1_2:-56038792 Msa0078480:CDS
TCGTTATCTAAACCATCCCT+GGG 0.582810 1_2:-56039457 Msa0078480:CDS
TGAGTTGTTTGAGGGGAAGA+CGG 0.583516 1_2:-56042880 Msa0078480:five_prime_UTR
TTGCAGCTGTCACACATGTA+CGG 0.584939 1_2:+56038641 None:intergenic
ACCGCTGTTTGCAATGGCAG+GGG 0.585167 1_2:+56038588 None:intergenic
TCTCATGGAAAAGAAGTCGA+GGG 0.585189 1_2:-56039895 Msa0078480:CDS
GTTGTACGAATGATGGTGCA+AGG 0.586869 1_2:-56039612 Msa0078480:CDS
GAAATTGCGTTGTGATGCGA+GGG 0.588164 1_2:+56043474 None:intergenic
GTATTAGCAGAAGAGAAGAC+TGG 0.589226 1_2:-56041365 Msa0078480:five_prime_UTR
GTCTTCCCCTCAAACAACTC+AGG 0.589740 1_2:+56042882 None:intergenic
TCATCATCAGATATATTCCT+CGG 0.590654 1_2:+56038517 None:intergenic
CGAAGCTAAACGGATAGAGA+AGG 0.591006 1_2:-56038743 Msa0078480:CDS
ACGATTTCTTTGGAGAGAAG+GGG 0.591672 1_2:-56043032 Msa0078480:five_prime_UTR
GGTATCTAAAAGAAAATACA+AGG 0.595004 1_2:-56038809 Msa0078480:CDS
TGATATACCTATGGAAGAGA+GGG 0.595227 1_2:-56042934 Msa0078480:five_prime_UTR
AGGTGAACCGCTGTTTGCAA+TGG 0.596634 1_2:+56038582 None:intergenic
GAGTGCTTAATTTCTTCAGG+TGG 0.600028 1_2:-56036112 Msa0078480:exon
GGATTCTCAGAAACAAAAGA+TGG 0.603100 1_2:-56039844 Msa0078480:CDS
CTACCTGTTTGGCGTGCACG+GGG 0.603320 1_2:+56039051 None:intergenic
CCACCGGACGAATGGGTCGA+CGG 0.603852 1_2:-56043281 Msa0078480:five_prime_UTR
GTTGATATGGGATCGAGGCA+GGG 0.604108 1_2:-56042642 Msa0078480:five_prime_UTR
ACTCTGGCTTGAATGTAAAG+AGG 0.604585 1_2:+56039537 None:intergenic
TAAACGGATAGAGAAGGAGA+AGG 0.606043 1_2:-56038737 Msa0078480:CDS
AAAGAAGTCGAGGGATCTGA+AGG 0.606898 1_2:-56039886 Msa0078480:CDS
TGGCGTGCACGGGGTACCCG+TGG 0.607010 1_2:+56039060 None:intergenic
ATCAATGAGATAATGAGCAA+GGG 0.607753 1_2:-56037867 Msa0078480:CDS
AACAACTCAGGATCCCCACC+AGG 0.607787 1_2:+56042894 None:intergenic
TGCGGTGTCAATTTCGACGA+TGG 0.608647 1_2:-56043236 Msa0078480:five_prime_UTR
GCGGTGGTGGGAGAATGAAA+GGG 0.611312 1_2:-56043328 Msa0078480:five_prime_UTR
GTTGTTCATTCGAGTAAGCG+TGG 0.611407 1_2:-56042516 Msa0078480:five_prime_UTR
TCGCCCGATGGATCCACCAC+CGG 0.611818 1_2:-56043297 Msa0078480:five_prime_UTR
ATGATACAGCAACTGCTGGA+AGG 0.614150 1_2:-56038498 Msa0078480:CDS
TAGTGCCACAGAAAGCTGAA+AGG 0.614464 1_2:-56039342 Msa0078480:CDS
AGCGTAAAGCTCGAAAACGC+AGG 0.615345 1_2:-56036311 Msa0078480:CDS
GTCACATGAAACTACAACAG+AGG 0.615973 1_2:-56035640 Msa0078480:three_prime_UTR
ATGCTTTAGAACTGATGTAA+CGG 0.616347 1_2:+56041304 None:intergenic
ACTTGGAGTCTGGTGACCCA+GGG 0.617001 1_2:+56039441 None:intergenic
CCACGAGGATCTTCTGTCTG+AGG 0.619092 1_2:+56040231 None:intergenic
CAATTGTGGTACTTGTGCGA+AGG 0.621324 1_2:-56035749 Msa0078480:three_prime_UTR
GGTTAAAACTTCTGATAGAG+AGG 0.623474 1_2:-56042451 Msa0078480:five_prime_UTR
CGGGGTACCCGTGGTACACG+AGG 0.624036 1_2:+56039069 None:intergenic
AGTGCGATGAATGTGACGTA+TGG 0.624264 1_2:-56043199 Msa0078480:five_prime_UTR
TTTCTTGCTTCTACAAACAA+GGG 0.624446 1_2:-56040315 Msa0078480:CDS
CATGCTAATGAAGCGAGCAT+CGG 0.625215 1_2:-56038998 Msa0078480:CDS
GTTGGAGAAGGATTCAATGA+TGG 0.628707 1_2:+56039268 None:intergenic
TGCTGTGGGTACCACCATGG+AGG 0.629513 1_2:-56041474 Msa0078480:five_prime_UTR
GTTCATTGGTATGACTATCA+GGG 0.630607 1_2:+56039932 None:intergenic
GTGCGATGAATGTGACGTAT+GGG 0.630907 1_2:-56043198 Msa0078480:five_prime_UTR
TTGTTCATTCGAGTAAGCGT+GGG 0.632548 1_2:-56042515 Msa0078480:five_prime_UTR
ATGGGTCGACGGTTCATGGA+CGG 0.634086 1_2:-56043270 Msa0078480:five_prime_UTR
AGGAGGTGGATATCAAGAAG+AGG 0.634251 1_2:-56042431 Msa0078480:five_prime_UTR
GAAGATAATGGATATGACAA+AGG 0.634569 1_2:-56036399 Msa0078480:CDS
GTGCAAGGGATGAAATTCCA+AGG 0.634904 1_2:-56039597 Msa0078480:CDS
TCATTCGAGTAAGCGTGGGA+AGG 0.635505 1_2:-56042511 Msa0078480:five_prime_UTR
CCAACCTTGCCCATTCATGT+CGG 0.638118 1_2:+56037610 None:intergenic
TAAAACTTCTGATAGAGAGG+AGG 0.638624 1_2:-56042448 Msa0078480:five_prime_UTR
ATCGAAATTTGTCATCAATG+AGG 0.638961 1_2:-56038546 Msa0078480:CDS
GGGATCCTGAGTTGTTTGAG+GGG 0.640575 1_2:-56042887 Msa0078480:five_prime_UTR
CATTCTCCAATACTAGTGAA+GGG 0.640863 1_2:-56036209 Msa0078480:CDS
AGGGCGATCGAATCGCCCGA+TGG 0.641334 1_2:-56043309 Msa0078480:five_prime_UTR
GAGAGGATGTTGATCCCAAG+AGG 0.642176 1_2:-56042398 Msa0078480:five_prime_UTR
GAGAGGATGTTAATCCCAAG+AGG 0.644865 1_2:-56042362 Msa0078480:five_prime_UTR
TGGGCAAGGTTGGTTGATCG+CGG 0.645189 1_2:-56037600 Msa0078480:CDS
GGAACCGACATGAATGGGCA+AGG 0.648601 1_2:-56037614 Msa0078480:CDS
AAACGGATAGAGAAGGAGAA+GGG 0.649898 1_2:-56038736 Msa0078480:CDS
CAATCAAGAACAGCTTGGGA+GGG 0.650458 1_2:+56037642 None:intergenic
AGTCATACCAATGAACTACC+TGG 0.652379 1_2:-56039925 Msa0078480:CDS
GCGAAGGACATGTCACTGAT+CGG 0.652488 1_2:-56035733 Msa0078480:three_prime_UTR
ATAGTTCACCTCGTGTACCA+CGG 0.653887 1_2:-56039077 Msa0078480:CDS
AGGCGACTCACTAACTGGTG+AGG 0.656077 1_2:-56036241 Msa0078480:CDS
GAAGAGGACTTCTGACAGAG+AGG 0.656523 1_2:-56042415 Msa0078480:five_prime_UTR
GAATTATCGAAAGATAGGAG+TGG 0.658009 1_2:-56042486 Msa0078480:five_prime_UTR
AGGATGTTGATCCCAAGAGG+AGG 0.658931 1_2:-56042395 Msa0078480:five_prime_UTR
ATAATGCGGTTAAGAAGGAG+AGG 0.660714 1_2:-56042557 Msa0078480:five_prime_UTR
GTAAAGCTCGAAAACGCAGG+CGG 0.661686 1_2:-56036308 Msa0078480:CDS
CTTTGGTTGATATGGGATCG+AGG 0.663648 1_2:-56042647 Msa0078480:five_prime_UTR
AGGATGTAGATCACAAGAGG+AGG 0.664606 1_2:-56042323 Msa0078480:five_prime_UTR
TTGCTTGGAAGCTAATAATG+TGG 0.665884 1_2:-56040286 Msa0078480:CDS
TGGAACGAGTAAGTTAGGGA+AGG 0.667234 1_2:-56042598 Msa0078480:five_prime_UTR
CAGATTCTACAAAATCTACA+CGG 0.667371 1_2:+56035903 None:intergenic
GTTATTTGATACCTCCATGG+TGG 0.671702 1_2:+56041463 None:intergenic
GAAGAACAACCGTGTCGGAG+CGG 0.673126 1_2:-56043111 Msa0078480:five_prime_UTR
ACCCCTGCCATTGCAAACAG+CGG 0.673552 1_2:-56038589 Msa0078480:CDS
AAGAGAGGGTTCATGTTCAG+GGG 0.674862 1_2:-56042920 Msa0078480:five_prime_UTR
AAACTTCTTAGGAACATACC+CGG 0.677501 1_2:+56042821 None:intergenic
CTTGCTTCTACAAACAAGGG+CGG 0.683066 1_2:-56040312 Msa0078480:CDS
GAACAATACCGAGGAAACTG+AGG 0.686125 1_2:-56043087 Msa0078480:five_prime_UTR
GCTTCTGTAAAGGAAGAAGG+AGG 0.688187 1_2:-56038664 Msa0078480:CDS
GGTCGACGGTTCATGGACGG+TGG 0.689534 1_2:-56043267 Msa0078480:five_prime_UTR
TTGTACGAATGATGGTGCAA+GGG 0.690929 1_2:-56039611 Msa0078480:CDS
ACAAATTTCGATCCTCACGG+GGG 0.691936 1_2:+56038557 None:intergenic
CAAATTTCGATCCTCACGGG+GGG 0.698799 1_2:+56038558 None:intergenic
GCAAGAGAATGAGGATAATG+GGG 0.699092 1_2:-56042733 Msa0078480:five_prime_UTR
AAAGCGAAGAACAACCGTGT+CGG 0.702603 1_2:-56043116 Msa0078480:five_prime_UTR
AAGGATTCAATGATGGTGTG+TGG 0.704100 1_2:+56039275 None:intergenic
TGGACGGTGGACTGTATCTG+CGG 0.707808 1_2:-56043254 Msa0078480:five_prime_UTR
GGGTTGCGTCGTGTTCGCGG+AGG 0.708193 1_2:-56042974 Msa0078480:five_prime_UTR
CATCAATGAGGAACTCTCCG+AGG 0.708626 1_2:-56038534 Msa0078480:CDS
CCGGTACATTTCCACAACTG+CGG 0.719309 1_2:+56042840 None:intergenic
TAAGAACTTAAAAGACACAG+TGG 0.722598 1_2:-56041525 Msa0078480:five_prime_UTR
TCACTAACTGGTGAGGACGT+CGG 0.723025 1_2:-56036234 Msa0078480:CDS
ATTGCTTACAGAACAGATCG+CGG 0.723740 1_2:-56043353 Msa0078480:five_prime_UTR
TATGCCGCGTGTCCATAATG+CGG 0.725117 1_2:-56042571 Msa0078480:five_prime_UTR
TTAACCGCATTATGGACACG+CGG 0.737117 1_2:+56042567 None:intergenic
GTACATCAGATGATGAGACG+GGG 0.746023 1_2:-56036134 Msa0078480:CDS
TGTTCTGGTGCAGAACCACG+AGG 0.751562 1_2:+56040216 None:intergenic
CGGAGCGGAGAACAATACCG+AGG 0.757334 1_2:-56043096 Msa0078480:five_prime_UTR
CCTCAGACAGAAGATCCTCG+TGG 0.768472 1_2:-56040231 Msa0078480:CDS
GCTTACAGAACAGATCGCGG+CGG 0.787541 1_2:-56043350 Msa0078480:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAAATAGAAAAATAAC+CGG - chr1_2:56041267-56041286 Msa0078480:intron 10.0%
!! AATAATCATGCAATAATTAT+CGG - chr1_2:56037082-56037101 Msa0078480:intron 15.0%
!! TAACTAGTAATAATTGTAAT+AGG + chr1_2:56037453-56037472 None:intergenic 15.0%
!! GTTGATTATCAATTTATAAT+CGG + chr1_2:56038256-56038275 None:intergenic 15.0%
!! TAAATTATAGTTGAAGAAAA+GGG + chr1_2:56038372-56038391 None:intergenic 15.0%
!! TTAAATTATAGTTGAAGAAA+AGG + chr1_2:56038373-56038392 None:intergenic 15.0%
!! AATTAAAAGAGAAAAAAACA+AGG + chr1_2:56040071-56040090 None:intergenic 15.0%
!!! CATTTTTGTGTTTTATTTAT+TGG - chr1_2:56040091-56040110 Msa0078480:CDS 15.0%
!!! TTTTATTAGAAAAGATTTAG+AGG + chr1_2:56041011-56041030 None:intergenic 15.0%
!! AAAATATTTATTTAGTCTCA+TGG - chr1_2:56041044-56041063 Msa0078480:intron 15.0%
!!! TGAATTTTGATTATACAAAA+TGG - chr1_2:56041953-56041972 Msa0078480:intron 15.0%
!! TATAAATATTGACAAGATAT+AGG + chr1_2:56042264-56042283 None:intergenic 15.0%
!!! TTATAAATATTATTGAGTTG+TGG - chr1_2:56042279-56042298 Msa0078480:intron 15.0%
!! TTATGTTGTTGAAATTGAAA+TGG + chr1_2:56035634-56035653 None:intergenic 20.0%
!! GAGTTTAATTGAGAAATTTA+GGG + chr1_2:56035820-56035839 None:intergenic 20.0%
!! ATAAGTTACATCTATTATCT+AGG + chr1_2:56037045-56037064 None:intergenic 20.0%
!! AGATAATAGATGTAACTTAT+AGG - chr1_2:56037045-56037064 Msa0078480:intron 20.0%
!! ATAATCATGCAATAATTATC+GGG - chr1_2:56037083-56037102 Msa0078480:intron 20.0%
!!! TGTTCATATAAGTTGAAATT+AGG - chr1_2:56037124-56037143 Msa0078480:intron 20.0%
!!! TAAATCACATTTTGTAATTG+TGG + chr1_2:56037317-56037336 None:intergenic 20.0%
!! ACAATTATTACTAGTTACTA+TGG - chr1_2:56037456-56037475 Msa0078480:intron 20.0%
!! ATAACGTAAATCATCAATAT+TGG - chr1_2:56038102-56038121 Msa0078480:intron 20.0%
!!! ATAAATTGATAATCAACCAA+AGG - chr1_2:56038259-56038278 Msa0078480:intron 20.0%
!!! TAAATTGATAATCAACCAAA+GGG - chr1_2:56038260-56038279 Msa0078480:intron 20.0%
!!! TTTTAATATACTGAGACTTA+AGG - chr1_2:56038290-56038309 Msa0078480:intron 20.0%
!! CTTCAACTATAATTTAAAGA+AGG - chr1_2:56038376-56038395 Msa0078480:intron 20.0%
!!! ATTTAAAGTATCGCATATTT+AGG + chr1_2:56038750-56038769 None:intergenic 20.0%
!!! TTTTTGCATATTTTCTTACT+AGG - chr1_2:56038804-56038823 Msa0078480:CDS 20.0%
!! ATTTATAATAACACAGGTTT+CGG + chr1_2:56041237-56041256 None:intergenic 20.0%
!! GAGAAAATTTATAATAACAC+AGG + chr1_2:56041243-56041262 None:intergenic 20.0%
!! TCACAATAAAAAACAAAAGT+AGG + chr1_2:56041457-56041476 None:intergenic 20.0%
!!! AAAAATAGACTAGTTTCTTA+TGG + chr1_2:56041887-56041906 None:intergenic 20.0%
!! CTAAATATATTACAACTGAA+TGG + chr1_2:56042617-56042636 None:intergenic 20.0%
!! GATAAAAAAGAATGTACAAT+TGG - chr1_2:56043413-56043432 Msa0078480:five_prime_UTR 20.0%
!! TAAACATTTCTTAACAATTG+TGG - chr1_2:56043459-56043478 Msa0078480:five_prime_UTR 20.0%
!! AAACAAACTAGTGTGTTTTT+CGG + chr1_2:56035658-56035677 None:intergenic 25.0%
! TGAATATTCTACATGCTATA+AGG - chr1_2:56035771-56035790 Msa0078480:three_prime_UTR 25.0%
! GGAGTTTAATTGAGAAATTT+AGG + chr1_2:56035821-56035840 None:intergenic 25.0%
! AACTCCAAATTTCGTAAATT+AGG - chr1_2:56035835-56035854 Msa0078480:intron 25.0%
! ACTCCAAATTTCGTAAATTA+GGG - chr1_2:56035836-56035855 Msa0078480:intron 25.0%
! AAACCCTAATTTACGAAATT+TGG + chr1_2:56035842-56035861 None:intergenic 25.0%
! TACTGAAAACTAAACTTCTT+AGG + chr1_2:56036415-56036434 None:intergenic 25.0%
!!! AGAAGTTTAGTTTTCAGTAT+AGG - chr1_2:56036416-56036435 Msa0078480:CDS 25.0%
!!! GAAGTTTAGTTTTCAGTATA+GGG - chr1_2:56036417-56036436 Msa0078480:CDS 25.0%
! TGAGAATGAAAATGATGATA+AGG - chr1_2:56036462-56036481 Msa0078480:intron 25.0%
! GAGAATGAAAATGATGATAA+GGG - chr1_2:56036463-56036482 Msa0078480:intron 25.0%
! GAAAGAGGTTAATAATATGT+TGG - chr1_2:56036534-56036553 Msa0078480:intron 25.0%
!!! AAGTTTTGTCGTTCTTAATT+TGG - chr1_2:56036994-56037013 Msa0078480:intron 25.0%
! CTAGTAATAATTGTAATAGG+AGG + chr1_2:56037450-56037469 None:intergenic 25.0%
! CAATCAAACTTGTCAAAATT+TGG - chr1_2:56037996-56038015 Msa0078480:intron 25.0%
! ACGTTATTAAATGCATAGTA+GGG + chr1_2:56038089-56038108 None:intergenic 25.0%
! TACGTTATTAAATGCATAGT+AGG + chr1_2:56038090-56038109 None:intergenic 25.0%
! TCTCAGTATATTAAAAGTTG+TGG + chr1_2:56038286-56038305 None:intergenic 25.0%
! CTATAATTTAAAGAAGGTTG+TGG - chr1_2:56038382-56038401 Msa0078480:intron 25.0%
! GATACTTTAAATTTCAGCTT+GGG - chr1_2:56038758-56038777 Msa0078480:CDS 25.0%
! ATCAGTGATCTTAAAAACAA+TGG - chr1_2:56039156-56039175 Msa0078480:intron 25.0%
! CTTACCTTTATGTGTAAATA+AGG - chr1_2:56039236-56039255 Msa0078480:intron 25.0%
! CATTCTTTGTATGAATGTTA+TGG + chr1_2:56039587-56039606 None:intergenic 25.0%
! CATAACATTCATACAAAGAA+TGG - chr1_2:56039585-56039604 Msa0078480:CDS 25.0%
!! AGCATTGAAGAATTTAATGT+TGG + chr1_2:56039975-56039994 None:intergenic 25.0%
! TCAATATATCTCCATAATAG+TGG - chr1_2:56040364-56040383 Msa0078480:intron 25.0%
! ATAATAAGTCACCACTATTA+TGG + chr1_2:56040378-56040397 None:intergenic 25.0%
! AATAGTGGTGACTTATTATA+TGG - chr1_2:56040379-56040398 Msa0078480:intron 25.0%
! GGTATCTAAAAGAAAATACA+AGG - chr1_2:56040413-56040432 Msa0078480:intron 25.0%
! TATAACATGCGAATATAGAA+TGG + chr1_2:56040836-56040855 None:intergenic 25.0%
! TATTCGCATGTTATAAGTAT+AGG - chr1_2:56040841-56040860 Msa0078480:intron 25.0%
! AGTATAGGATTGATTATTGT+TGG - chr1_2:56040856-56040875 Msa0078480:intron 25.0%
! ATTACTTCTCTATAGTTGAT+AGG - chr1_2:56041147-56041166 Msa0078480:intron 25.0%
!!! CTTTATCAATGTTGTTTTTG+AGG - chr1_2:56041429-56041448 Msa0078480:five_prime_UTR 25.0%
!!! CTTTTGTTTTTTATTGTGAC+AGG - chr1_2:56041458-56041477 Msa0078480:five_prime_UTR 25.0%
! AAAAGAAATGAACATGTTCA+TGG + chr1_2:56041497-56041516 None:intergenic 25.0%
!! CCATTATGTTTTCTTAAGTT+GGG + chr1_2:56041538-56041557 None:intergenic 25.0%
!! TCCATTATGTTTTCTTAAGT+TGG + chr1_2:56041539-56041558 None:intergenic 25.0%
! TCTTCAGATAGAAAACAAAT+CGG + chr1_2:56041927-56041946 None:intergenic 25.0%
! ATGAAAGCAGATCTTAAAAT+TGG + chr1_2:56042059-56042078 None:intergenic 25.0%
! AAGATCTGCTTTCATATTAA+AGG - chr1_2:56042064-56042083 Msa0078480:intron 25.0%
! ATTTCCAACTCATAGATAAT+AGG + chr1_2:56042383-56042402 None:intergenic 25.0%
! TTATCCGCAAAAAAATATGT+GGG - chr1_2:56042479-56042498 Msa0078480:five_prime_UTR 25.0%
!! AGCTCTTTCTTTTATTCATT+TGG - chr1_2:56042641-56042660 Msa0078480:five_prime_UTR 25.0%
! CAATATTTCAGACAAATACT+AGG - chr1_2:56042767-56042786 Msa0078480:five_prime_UTR 25.0%
!! GTAACTTGTAAGTTATTCAA+AGG - chr1_2:56043341-56043360 Msa0078480:five_prime_UTR 25.0%
!! GTAACTTGTAAGTTATTCAA+AGG - chr1_2:56043341-56043360 Msa0078480:five_prime_UTR 25.0%
! AACAAACTAGTGTGTTTTTC+GGG + chr1_2:56035657-56035676 None:intergenic 30.0%
GTGTTTATCTATCTATCCAT+CGG + chr1_2:56035696-56035715 None:intergenic 30.0%
TAATGGAATTGCTTCTTCTA+GGG - chr1_2:56036228-56036247 Msa0078480:CDS 30.0%
ATATCAGTCCAAAGCTTAAA+CGG + chr1_2:56036274-56036293 None:intergenic 30.0%
TTACTCGAATGAACAACAAA+CGG + chr1_2:56036703-56036722 None:intergenic 30.0%
AGGATGAATTATCGAAAGAT+AGG - chr1_2:56036731-56036750 Msa0078480:intron 30.0%
AATTATCGAAAGATAGGAGT+GGG - chr1_2:56036737-56036756 Msa0078480:intron 30.0%
TGTGGTTTCATTAACTTAGT+GGG + chr1_2:56037299-56037318 None:intergenic 30.0%
TTGTGGTTTCATTAACTTAG+TGG + chr1_2:56037300-56037319 None:intergenic 30.0%
! TAGTCAATATGTTGATTGCT+AGG - chr1_2:56037335-56037354 Msa0078480:intron 30.0%
ATGCTAGTAATCAAAATGAG+AGG + chr1_2:56037589-56037608 None:intergenic 30.0%
! GCAAAACAATTGGCATTTTA+TGG - chr1_2:56037626-56037645 Msa0078480:CDS 30.0%
TAAGAACTTAAAAGACACAG+TGG - chr1_2:56037697-56037716 Msa0078480:intron 30.0%
! TTCTAATGATTCTTTTGCTG+TGG - chr1_2:56037733-56037752 Msa0078480:intron 30.0%
!! TCTAATGATTCTTTTGCTGT+GGG - chr1_2:56037734-56037753 Msa0078480:intron 30.0%
CGTTATATCCCAAAAAAACA+AGG - chr1_2:56037813-56037832 Msa0078480:intron 30.0%
!! ATGCTTTAGAACTGATGTAA+CGG + chr1_2:56037921-56037940 None:intergenic 30.0%
CAAGTGATAATCGACTATTA+TGG - chr1_2:56038173-56038192 Msa0078480:intron 30.0%
ATATACTGAGACTTAAGGTT+AGG - chr1_2:56038295-56038314 Msa0078480:intron 30.0%
! ATTTTCAGATGGTTTAAGAG+AGG - chr1_2:56038406-56038425 Msa0078480:intron 30.0%
AACAGTCGATAACAAATTCT+AGG - chr1_2:56038514-56038533 Msa0078480:CDS 30.0%
!!! CGACAATCTATACTCTTTTT+TGG - chr1_2:56038547-56038566 Msa0078480:CDS 30.0%
! ATTAGTCTAGACTTAAATCG+TGG - chr1_2:56038578-56038597 Msa0078480:CDS 30.0%
GAAGAGTTTGGTAAATGAAT+TGG - chr1_2:56038613-56038632 Msa0078480:CDS 30.0%
TATCAGATACTATGCTAGAA+TGG - chr1_2:56038665-56038684 Msa0078480:CDS 30.0%
CAAGTTTCAAAAAAGATGGA+GGG + chr1_2:56038712-56038731 None:intergenic 30.0%
!!! CTCCATCTTTTTTGAAACTT+GGG - chr1_2:56038711-56038730 Msa0078480:CDS 30.0%
!!! TCCATCTTTTTTGAAACTTG+GGG - chr1_2:56038712-56038731 Msa0078480:CDS 30.0%
CGATACTTTAAATTTCAGCT+TGG - chr1_2:56038757-56038776 Msa0078480:CDS 30.0%
! GTTTATCATGCATAGCTTTA+CGG - chr1_2:56038826-56038845 Msa0078480:intron 30.0%
ATTTCTTGCTTCTACAAACA+AGG - chr1_2:56038906-56038925 Msa0078480:intron 30.0%
TTTCTTGCTTCTACAAACAA+GGG - chr1_2:56038907-56038926 Msa0078480:intron 30.0%
ACTTTACCAATATCAGATGT+GGG + chr1_2:56039195-56039214 None:intergenic 30.0%
TTTACACATAAAGGTAAGCT+GGG + chr1_2:56039234-56039253 None:intergenic 30.0%
ATTTACACATAAAGGTAAGC+TGG + chr1_2:56039235-56039254 None:intergenic 30.0%
ACCTTTATGTGTAAATAAGG+TGG - chr1_2:56039239-56039258 Msa0078480:CDS 30.0%
CCTTTATGTGTAAATAAGGT+GGG - chr1_2:56039240-56039259 Msa0078480:CDS 30.0%
AAAATTACCAGGTAGTTCAT+TGG + chr1_2:56039307-56039326 None:intergenic 30.0%
TTTCCATGAGAAAAATTACC+AGG + chr1_2:56039318-56039337 None:intergenic 30.0%
!! ATGTAAAGAGGATTTTGAAG+AGG + chr1_2:56039676-56039695 None:intergenic 30.0%
GAAGAATTTAATGTTGGAGA+AGG + chr1_2:56039969-56039988 None:intergenic 30.0%
AAAAAACAAGGACATTCTAG+AGG + chr1_2:56040059-56040078 None:intergenic 30.0%
!!! TGTGTATCGTTTTTAGTTGA+TGG + chr1_2:56040286-56040305 None:intergenic 30.0%
TATTATATGGTCATATGCAC+AGG - chr1_2:56040392-56040411 Msa0078480:intron 30.0%
ATCGAAATTTGTCATCAATG+AGG - chr1_2:56040676-56040695 Msa0078480:intron 30.0%
TCATCATCAGATATATTCCT+CGG + chr1_2:56040708-56040727 None:intergenic 30.0%
ACATTGAACAACAACAACAT+CGG - chr1_2:56040887-56040906 Msa0078480:intron 30.0%
! CAATGAGTTGGATTCAAATA+TGG + chr1_2:56040987-56041006 None:intergenic 30.0%
AAAATTTCATGTAGCACTCA+AGG + chr1_2:56041118-56041137 None:intergenic 30.0%
CTTATGTATTGGGAAATTTG+TGG - chr1_2:56041292-56041311 Msa0078480:five_prime_UTR 30.0%
AATCAATGAGATAATGAGCA+AGG - chr1_2:56041354-56041373 Msa0078480:five_prime_UTR 30.0%
ATCAATGAGATAATGAGCAA+GGG - chr1_2:56041355-56041374 Msa0078480:five_prime_UTR 30.0%
ACATTGATAAAGAACCATAC+CGG + chr1_2:56041421-56041440 None:intergenic 30.0%
! TTATTGTGACAGGTTGAAAT+AGG - chr1_2:56041468-56041487 Msa0078480:five_prime_UTR 30.0%
CCCAACTTAAGAAAACATAA+TGG - chr1_2:56041535-56041554 Msa0078480:five_prime_UTR 30.0%
AAATTACACATACGTACCTT+TGG + chr1_2:56041649-56041668 None:intergenic 30.0%
CAAATTATGGCAACAAGTTT+GGG - chr1_2:56041773-56041792 Msa0078480:intron 30.0%
AAATTATGGCAACAAGTTTG+GGG - chr1_2:56041774-56041793 Msa0078480:intron 30.0%
ATAACCAAAAAAGCAATTCC+TGG + chr1_2:56041847-56041866 None:intergenic 30.0%
TGGAAGACAAATACAGTTTA+AGG + chr1_2:56042004-56042023 None:intergenic 30.0%
AAGCAGATCTTAAAATTGGT+TGG + chr1_2:56042055-56042074 None:intergenic 30.0%
! TATCTTTTCCGATCAAGTAA+AGG + chr1_2:56042128-56042147 None:intergenic 30.0%
!!! GTAACTTCCTATTTTTGTAG+GGG + chr1_2:56042242-56042261 None:intergenic 30.0%
!!! GGTAACTTCCTATTTTTGTA+GGG + chr1_2:56042243-56042262 None:intergenic 30.0%
!!! AGGTAACTTCCTATTTTTGT+AGG + chr1_2:56042244-56042263 None:intergenic 30.0%
ACCTCTAAATAGATCCATTA+TGG - chr1_2:56042332-56042351 Msa0078480:five_prime_UTR 30.0%
!! TCCATAATGGATCTATTTAG+AGG + chr1_2:56042336-56042355 None:intergenic 30.0%
GATAATAGGACAACAAAGAT+AGG + chr1_2:56042369-56042388 None:intergenic 30.0%
TTGTCCTATTATCTATGAGT+TGG - chr1_2:56042376-56042395 Msa0078480:five_prime_UTR 30.0%
ATGGGTCTTAATGAACTTAA+AGG + chr1_2:56042422-56042441 None:intergenic 30.0%
GTTATCCGCAAAAAAATATG+TGG - chr1_2:56042478-56042497 Msa0078480:five_prime_UTR 30.0%
!!! GAAACCCACATATTTTTTTG+CGG + chr1_2:56042486-56042505 None:intergenic 30.0%
ATATGTGGGTTTCTAATTTG+TGG - chr1_2:56042493-56042512 Msa0078480:five_prime_UTR 30.0%
! TATGTGGGTTTCTAATTTGT+GGG - chr1_2:56042494-56042513 Msa0078480:five_prime_UTR 30.0%
AATCATCTATTCCTCTGTAT+TGG + chr1_2:56042534-56042553 None:intergenic 30.0%
! AGAGGAATAGATGATTTTTG+TGG - chr1_2:56042538-56042557 Msa0078480:five_prime_UTR 30.0%
! GAGGAATAGATGATTTTTGT+GGG - chr1_2:56042539-56042558 Msa0078480:five_prime_UTR 30.0%
TTTCAAGACAGTAAATAGAG+TGG + chr1_2:56042724-56042743 None:intergenic 30.0%
ACTCTATTTACTGTCTTGAA+AGG - chr1_2:56042723-56042742 Msa0078480:five_prime_UTR 30.0%
TTCAGACAAATACTAGGAAA+AGG - chr1_2:56042773-56042792 Msa0078480:five_prime_UTR 30.0%
ACTGAAGAATCTGAAGATAA+TGG - chr1_2:56042811-56042830 Msa0078480:five_prime_UTR 30.0%
!! GAAGATAATGGATATGACAA+AGG - chr1_2:56042823-56042842 Msa0078480:five_prime_UTR 30.0%
AGGTGGCTAAATATCTAATT+GGG - chr1_2:56043127-56043146 Msa0078480:five_prime_UTR 30.0%
CAGATTCTACAAAATCTACA+CGG + chr1_2:56043322-56043341 None:intergenic 30.0%
AGTTATTCAAAGGTTCAGTT+AGG - chr1_2:56043351-56043370 Msa0078480:five_prime_UTR 30.0%
GTTATTCAAAGGTTCAGTTA+GGG - chr1_2:56043352-56043371 Msa0078480:five_prime_UTR 30.0%
AGTTATTCAAAGGTTCAGTT+AGG - chr1_2:56043351-56043370 Msa0078480:five_prime_UTR 30.0%
GTTATTCAAAGGTTCAGTTA+GGG - chr1_2:56043352-56043371 Msa0078480:five_prime_UTR 30.0%
TCCAAAGAAATCGTCTTTGT+CGG + chr1_2:56036184-56036203 None:intergenic 35.0%
! GTAATGGAATTGCTTCTTCT+AGG - chr1_2:56036227-56036246 Msa0078480:CDS 35.0%
TGATATACCTATGGAAGAGA+GGG - chr1_2:56036288-56036307 Msa0078480:CDS 35.0%
AAACTTCTTAGGAACATACC+CGG + chr1_2:56036404-56036423 None:intergenic 35.0%
TTCTCATTCTCATACCAAGA+AGG + chr1_2:56036448-56036467 None:intergenic 35.0%
TGCAAGAGAATGAGGATAAT+GGG - chr1_2:56036488-56036507 Msa0078480:intron 35.0%
ATATCAACCAAAGTCGTAAC+AGG + chr1_2:56036568-56036587 None:intergenic 35.0%
! TGTTACGACTTTGGTTGATA+TGG - chr1_2:56036567-56036586 Msa0078480:intron 35.0%
! GTTACGACTTTGGTTGATAT+GGG - chr1_2:56036568-56036587 Msa0078480:intron 35.0%
!!! AAGAAGGGTTTTAAGGAAAG+TGG - chr1_2:56036604-56036623 Msa0078480:intron 35.0%
AAAGTGGAACGAGTAAGTTA+GGG - chr1_2:56036620-56036639 Msa0078480:intron 35.0%
GAATTATCGAAAGATAGGAG+TGG - chr1_2:56036736-56036755 Msa0078480:intron 35.0%
GGTTAAAACTTCTGATAGAG+AGG - chr1_2:56036771-56036790 Msa0078480:intron 35.0%
TAAAACTTCTGATAGAGAGG+AGG - chr1_2:56036774-56036793 Msa0078480:intron 35.0%
!! ACTTCACATTCTTCTAAAGC+AGG - chr1_2:56036922-56036941 Msa0078480:intron 35.0%
GATAAATTAGACGAGCGTTT+CGG + chr1_2:56037169-56037188 None:intergenic 35.0%
!!! ACACGTTTTAATTGAGAAGC+TGG - chr1_2:56037232-56037251 Msa0078480:intron 35.0%
!! AATTGTTTTGCATCACAGGT+GGG + chr1_2:56037617-56037636 None:intergenic 35.0%
ATGTCATCCTTGAAAACCTT+CGG + chr1_2:56037662-56037681 None:intergenic 35.0%
!! AGGTTTTCAAGGATGACATT+CGG - chr1_2:56037663-56037682 Msa0078480:CDS 35.0%
!! GTTGTTATTTGATACCTCCA+TGG + chr1_2:56037765-56037784 None:intergenic 35.0%
!!! TGACTACGCCTTGTTTTTTT+GGG + chr1_2:56037824-56037843 None:intergenic 35.0%
!!! ATGACTACGCCTTGTTTTTT+TGG + chr1_2:56037825-56037844 None:intergenic 35.0%
AAATGCCTCAGCTAAAAAGA+AGG - chr1_2:56037952-56037971 Msa0078480:intron 35.0%
!!! ACATACCTTCTTTTTAGCTG+AGG + chr1_2:56037960-56037979 None:intergenic 35.0%
GACACATGCAGACATAATAT+AGG + chr1_2:56038033-56038052 None:intergenic 35.0%
TATTAAATGCATAGTAGGGC+AGG + chr1_2:56038085-56038104 None:intergenic 35.0%
ACTTTATCATGCACAGTCTT+AGG + chr1_2:56038222-56038241 None:intergenic 35.0%
TATTAAAAGTTGTGGCCCTT+TGG + chr1_2:56038278-56038297 None:intergenic 35.0%
!! TAGTTGAAGAAAAGGGTGTT+GGG + chr1_2:56038365-56038384 None:intergenic 35.0%
! ATAGTTGAAGAAAAGGGTGT+TGG + chr1_2:56038366-56038385 None:intergenic 35.0%
! AAGGTTGTGGAATTTTCAGA+TGG - chr1_2:56038395-56038414 Msa0078480:intron 35.0%
TAAATCGTGGAGAAAACATG+TGG - chr1_2:56038591-56038610 Msa0078480:CDS 35.0%
AGAAAACATGTGGAAGAGTT+TGG - chr1_2:56038601-56038620 Msa0078480:CDS 35.0%
TTTCAAAAAAGATGGAGGGA+TGG + chr1_2:56038708-56038727 None:intergenic 35.0%
CCAAGTTTCAAAAAAGATGG+AGG + chr1_2:56038713-56038732 None:intergenic 35.0%
!!! CCTCCATCTTTTTTGAAACT+TGG - chr1_2:56038710-56038729 Msa0078480:CDS 35.0%
!!! AGCTTTCAGGTTTTTTGCTA+GGG - chr1_2:56038781-56038800 Msa0078480:CDS 35.0%
TTGCTTGGAAGCTAATAATG+TGG - chr1_2:56038936-56038955 Msa0078480:intron 35.0%
!! ACTTGCTTTTCCATATGTTC+TGG + chr1_2:56039024-56039043 None:intergenic 35.0%
CACTTTACCAATATCAGATG+TGG + chr1_2:56039196-56039215 None:intergenic 35.0%
! CCCACCTTATTTACACATAA+AGG + chr1_2:56039243-56039262 None:intergenic 35.0%
GTTCATTGGTATGACTATCA+GGG + chr1_2:56039293-56039312 None:intergenic 35.0%
AGTTCATTGGTATGACTATC+AGG + chr1_2:56039294-56039313 None:intergenic 35.0%
! CTACCTGGTAATTTTTCTCA+TGG - chr1_2:56039312-56039331 Msa0078480:CDS 35.0%
!! AGGTTCCTTTGAAACACAAA+AGG - chr1_2:56039356-56039375 Msa0078480:CDS 35.0%
!! GGTTCCTTTGAAACACAAAA+GGG - chr1_2:56039357-56039376 Msa0078480:CDS 35.0%
! GAATCCCTTTTGTGTTTCAA+AGG + chr1_2:56039364-56039383 None:intergenic 35.0%
GGATTCTCAGAAACAAAAGA+TGG - chr1_2:56039378-56039397 Msa0078480:CDS 35.0%
CTCAGAAACAAAAGATGGTA+TGG - chr1_2:56039383-56039402 Msa0078480:CDS 35.0%
! TCAAGTGCTTCAGATTTTGA+TGG + chr1_2:56039423-56039442 None:intergenic 35.0%
CAGTTCATGATTGATGAAGT+TGG + chr1_2:56039486-56039505 None:intergenic 35.0%
! TATCTTCAGATTTGAAGTCC+TGG + chr1_2:56039521-56039540 None:intergenic 35.0%
! GCTAATCCTTTTACAAAGCA+TGG - chr1_2:56039549-56039568 Msa0078480:CDS 35.0%
TTAGCTCCATGCTTTGTAAA+AGG + chr1_2:56039558-56039577 None:intergenic 35.0%
AATGGAAGTTGTACGAATGA+TGG - chr1_2:56039603-56039622 Msa0078480:CDS 35.0%
GTTCAACTTAGAGGAAGAAT+GGG + chr1_2:56039922-56039941 None:intergenic 35.0%
TGGAGGAAAGGATAACTATT+TGG - chr1_2:56040248-56040267 Msa0078480:CDS 35.0%
GGAAAGGATAACTATTTGGT+AGG - chr1_2:56040252-56040271 Msa0078480:CDS 35.0%
! GCGAGTTTTCACGATAATAT+TGG - chr1_2:56040341-56040360 Msa0078480:exon 35.0%
ATGACAAATTTCGATCCTCA+CGG + chr1_2:56040671-56040690 None:intergenic 35.0%
! TGGTTTTCGATAGAACACTA+TGG + chr1_2:56040967-56040986 None:intergenic 35.0%
AGATTTAGAGGTCAATGAGT+TGG + chr1_2:56040999-56041018 None:intergenic 35.0%
! GGTTAGCTCTTGTAATTTGT+AGG - chr1_2:56041201-56041220 Msa0078480:intron 35.0%
! AGCTCTTGTAATTTGTAGGT+AGG - chr1_2:56041205-56041224 Msa0078480:intron 35.0%
AATAACCGGTGCTTATGTAT+TGG - chr1_2:56041281-56041300 Msa0078480:five_prime_UTR 35.0%
ATAACCGGTGCTTATGTATT+GGG - chr1_2:56041282-56041301 Msa0078480:five_prime_UTR 35.0%
ATTTCCCAATACATAAGCAC+CGG + chr1_2:56041289-56041308 None:intergenic 35.0%
ATATACACGTATTCAAGTGC+AGG - chr1_2:56041328-56041347 Msa0078480:five_prime_UTR 35.0%
!! CTTTTTAATTGTCACAGCAC+TGG - chr1_2:56041512-56041531 Msa0078480:five_prime_UTR 35.0%
CAAACAATCAAGAACAGCTT+GGG + chr1_2:56041587-56041606 None:intergenic 35.0%
TCAAACAATCAAGAACAGCT+TGG + chr1_2:56041588-56041607 None:intergenic 35.0%
AAGCTGTTCTTGATTGTTTG+AGG - chr1_2:56041587-56041606 Msa0078480:five_prime_UTR 35.0%
TAAACAATAGACAGCTCAAG+CGG + chr1_2:56041679-56041698 None:intergenic 35.0%
TTCAAAAACCTACCAACTCA+AGG - chr1_2:56041723-56041742 Msa0078480:intron 35.0%
TAATTCAATCCTCCTTGAGT+TGG + chr1_2:56041738-56041757 None:intergenic 35.0%
GTTTGCGACTAACCAAATTA+TGG - chr1_2:56041760-56041779 Msa0078480:intron 35.0%
!! CCAAACTTGTTGCCATAATT+TGG + chr1_2:56041775-56041794 None:intergenic 35.0%
CCAAATTATGGCAACAAGTT+TGG - chr1_2:56041772-56041791 Msa0078480:intron 35.0%
GGCTAAAGACAAATGATTTG+TGG + chr1_2:56041826-56041845 None:intergenic 35.0%
CAAATCATTTGTCTTTAGCC+AGG - chr1_2:56041826-56041845 Msa0078480:intron 35.0%
!!! TTAGCCAGGAATTGCTTTTT+TGG - chr1_2:56041840-56041859 Msa0078480:intron 35.0%
AGTTTCTTATGGTCAGAGAA+TGG + chr1_2:56041876-56041895 None:intergenic 35.0%
TGATTATACAAAATGGCCAG+TGG - chr1_2:56041960-56041979 Msa0078480:intron 35.0%
GATTATACAAAATGGCCAGT+GGG - chr1_2:56041961-56041980 Msa0078480:intron 35.0%
ATATATCCATTAGTTCCCAC+TGG + chr1_2:56041979-56041998 None:intergenic 35.0%
ACATACAAGTAGGTTACACA+TGG + chr1_2:56042024-56042043 None:intergenic 35.0%
ACACATTGCCTTTACTTGAT+CGG - chr1_2:56042117-56042136 Msa0078480:intron 35.0%
ATCTAGACCCCTACAAAAAT+AGG - chr1_2:56042232-56042251 Msa0078480:intron 35.0%
TAGGACAACAAAGATAGGAA+GGG + chr1_2:56042364-56042383 None:intergenic 35.0%
ATAGGACAACAAAGATAGGA+AGG + chr1_2:56042365-56042384 None:intergenic 35.0%
! ATGTGGGTTTCTAATTTGTG+GGG - chr1_2:56042495-56042514 Msa0078480:five_prime_UTR 35.0%
GTAGACAACAACAAAAAACC+AGG + chr1_2:56042686-56042705 None:intergenic 35.0%
AAATCTGCAAAAGAGACTGA+TGG - chr1_2:56042847-56042866 Msa0078480:five_prime_UTR 35.0%
AATCTGCAAAAGAGACTGAT+GGG - chr1_2:56042848-56042867 Msa0078480:five_prime_UTR 35.0%
CAAAAAGAAGAGTTCCCTAA+AGG - chr1_2:56042886-56042905 Msa0078480:five_prime_UTR 35.0%
CATTCTCCAATACTAGTGAA+GGG - chr1_2:56043013-56043032 Msa0078480:five_prime_UTR 35.0%
!! GAAGTTCAAGTTGACAGAAT+AGG - chr1_2:56043054-56043073 Msa0078480:five_prime_UTR 35.0%
AAGTACATCAGATGATGAGA+CGG - chr1_2:56043086-56043105 Msa0078480:five_prime_UTR 35.0%
CAGGTGGCTAAATATCTAAT+TGG - chr1_2:56043126-56043145 Msa0078480:five_prime_UTR 35.0%
! TTGCAGTAATTTGCACTTCT+TGG - chr1_2:56043157-56043176 Msa0078480:five_prime_UTR 35.0%
ATCTATCTATCCATCGGAGA+AGG + chr1_2:56035690-56035709 None:intergenic 40.0%
ATTGCTTACAGAACAGATCG+CGG - chr1_2:56035869-56035888 Msa0078480:intron 40.0%
CGTTGTTCTCGTTACGTTAA+AGG - chr1_2:56036055-56036074 Msa0078480:three_prime_UTR 40.0%
TCCGACAAAGACGATTTCTT+TGG - chr1_2:56036180-56036199 Msa0078480:CDS 40.0%
! AGACGATTTCTTTGGAGAGA+AGG - chr1_2:56036188-56036207 Msa0078480:CDS 40.0%
! GACGATTTCTTTGGAGAGAA+GGG - chr1_2:56036189-56036208 Msa0078480:CDS 40.0%
! ACGATTTCTTTGGAGAGAAG+GGG - chr1_2:56036190-56036209 Msa0078480:CDS 40.0%
GGGAATGGTAATAGGAGTAA+TGG - chr1_2:56036211-56036230 Msa0078480:CDS 40.0%
! GCTTTGGACTGATATACCTA+TGG - chr1_2:56036279-56036298 Msa0078480:CDS 40.0%
CTGATATACCTATGGAAGAG+AGG - chr1_2:56036287-56036306 Msa0078480:CDS 40.0%
AGTATAGGGAGTTTCCTTCT+TGG - chr1_2:56036431-56036450 Msa0078480:CDS 40.0%
GTGCAAGAGAATGAGGATAA+TGG - chr1_2:56036487-56036506 Msa0078480:intron 40.0%
GCAAGAGAATGAGGATAATG+GGG - chr1_2:56036489-56036508 Msa0078480:intron 40.0%
GAAAGTGGAACGAGTAAGTT+AGG - chr1_2:56036619-56036638 Msa0078480:intron 40.0%
TGTCCATAATGCGGTTAAGA+AGG - chr1_2:56036660-56036679 Msa0078480:intron 40.0%
TCTCCTTCTTAACCGCATTA+TGG + chr1_2:56036666-56036685 None:intergenic 40.0%
ATAATGCGGTTAAGAAGGAG+AGG - chr1_2:56036665-56036684 Msa0078480:intron 40.0%
! AGAAGGAGAGGAATTTGCTT+AGG - chr1_2:56036677-56036696 Msa0078480:intron 40.0%
TTGTTCATTCGAGTAAGCGT+GGG - chr1_2:56036707-56036726 Msa0078480:intron 40.0%
CTATCAGAAGTCTTCCTCTT+GGG + chr1_2:56036877-56036896 None:intergenic 40.0%
TCTATCAGAAGTCTTCCTCT+TGG + chr1_2:56036878-56036897 None:intergenic 40.0%
!! CAATTGTTTTGCATCACAGG+TGG + chr1_2:56037618-56037637 None:intergenic 40.0%
CACCTGTGATGCAAAACAAT+TGG - chr1_2:56037616-56037635 Msa0078480:CDS 40.0%
!! TGCCAATTGTTTTGCATCAC+AGG + chr1_2:56037621-56037640 None:intergenic 40.0%
! TTGGCATTTTATGGAGACAG+AGG - chr1_2:56037635-56037654 Msa0078480:CDS 40.0%
GTTATTTGATACCTCCATGG+TGG + chr1_2:56037762-56037781 None:intergenic 40.0%
! TAACGCTTCTGAAGACTCTT+CGG + chr1_2:56037798-56037817 None:intergenic 40.0%
GTATTAGCAGAAGAGAAGAC+TGG - chr1_2:56037857-56037876 Msa0078480:CDS 40.0%
!! AAAGGGTGTTGGGATATAAG+AGG + chr1_2:56038355-56038374 None:intergenic 40.0%
GAGCAGATTGCACAAATGAA+TGG - chr1_2:56038469-56038488 Msa0078480:intron 40.0%
GCCCCAAGTTTCAAAAAAGA+TGG + chr1_2:56038716-56038735 None:intergenic 40.0%
!!! GAGCTTTCAGGTTTTTTGCT+AGG - chr1_2:56038780-56038799 Msa0078480:CDS 40.0%
TAGTGTGAGACGAAGTCTAA+AGG + chr1_2:56038874-56038893 None:intergenic 40.0%
CTCTGGACAATGCAAAGTTA+AGG - chr1_2:56039077-56039096 Msa0078480:CDS 40.0%
TCTGATCCCACATCTGATAT+TGG - chr1_2:56039186-56039205 Msa0078480:intron 40.0%
GTAAATAAGGTGGGTGATGT+TGG - chr1_2:56039249-56039268 Msa0078480:CDS 40.0%
AGTCATACCAATGAACTACC+TGG - chr1_2:56039297-56039316 Msa0078480:CDS 40.0%
TTCTCATGGAAAAGAAGTCG+AGG - chr1_2:56039326-56039345 Msa0078480:CDS 40.0%
TCTCATGGAAAAGAAGTCGA+GGG - chr1_2:56039327-56039346 Msa0078480:CDS 40.0%
ATGAAGTTGGAGACGTCTTT+CGG + chr1_2:56039473-56039492 None:intergenic 40.0%
! TTGTACGAATGATGGTGCAA+GGG - chr1_2:56039611-56039630 Msa0078480:CDS 40.0%
!! GAGGATTTTGAAGAGGATCT+TGG + chr1_2:56039669-56039688 None:intergenic 40.0%
! ACTCTGGCTTGAATGTAAAG+AGG + chr1_2:56039688-56039707 None:intergenic 40.0%
! GAACAGAATTTTGCGTACTC+TGG + chr1_2:56039704-56039723 None:intergenic 40.0%
! ACATCTGGATTTGCTTGCTT+TGG + chr1_2:56039726-56039745 None:intergenic 40.0%
TGAACAGAATCTCTCACATC+TGG + chr1_2:56039741-56039760 None:intergenic 40.0%
TTCGTTATCTAAACCATCCC+TGG - chr1_2:56039764-56039783 Msa0078480:CDS 40.0%
TCGTTATCTAAACCATCCCT+GGG - chr1_2:56039765-56039784 Msa0078480:CDS 40.0%
GCATCAATGCACCATCAAAA+AGG - chr1_2:56039828-56039847 Msa0078480:CDS 40.0%
TTAAGCCTTTCAGCTTTCTG+TGG + chr1_2:56039888-56039907 None:intergenic 40.0%
GGTTCAACTTAGAGGAAGAA+TGG + chr1_2:56039923-56039942 None:intergenic 40.0%
! AAGGATTCAATGATGGTGTG+TGG + chr1_2:56039950-56039969 None:intergenic 40.0%
GTTGGAGAAGGATTCAATGA+TGG + chr1_2:56039957-56039976 None:intergenic 40.0%
TTCAATGCTGAGTGATGAAG+AGG - chr1_2:56039986-56040005 Msa0078480:CDS 40.0%
CATTAGCATGTTTGTAGCAC+TGG + chr1_2:56040214-56040233 None:intergenic 40.0%
TACAAGGATGCAACTAGAGA+TGG - chr1_2:56040429-56040448 Msa0078480:intron 40.0%
ACAAGGATGCAACTAGAGAT+GGG - chr1_2:56040430-56040449 Msa0078480:intron 40.0%
AACCAGAAGACGAAGCTAAA+CGG - chr1_2:56040469-56040488 Msa0078480:intron 40.0%
TAAACGGATAGAGAAGGAGA+AGG - chr1_2:56040485-56040504 Msa0078480:intron 40.0%
AAACGGATAGAGAAGGAGAA+GGG - chr1_2:56040486-56040505 Msa0078480:intron 40.0%
AAAACAAGACACAGCGTATG+TGG - chr1_2:56040530-56040549 Msa0078480:intron 40.0%
TGTGGAAGAAGCTTCTGTAA+AGG - chr1_2:56040548-56040567 Msa0078480:intron 40.0%
GAAGCTTCTGTAAAGGAAGA+AGG - chr1_2:56040555-56040574 Msa0078480:intron 40.0%
TGACAAATTTCGATCCTCAC+GGG + chr1_2:56040670-56040689 None:intergenic 40.0%
GAAGTCAATGTATCCCTGAA+AGG + chr1_2:56040779-56040798 None:intergenic 40.0%
CATGCATGAACCTTAAGCTT+CGG - chr1_2:56041078-56041097 Msa0078480:intron 40.0%
ATGCATGAACCTTAAGCTTC+GGG - chr1_2:56041079-56041098 Msa0078480:intron 40.0%
CCATATGTGCATCTAGGTTT+CGG - chr1_2:56041175-56041194 Msa0078480:intron 40.0%
TTTGAGGAACCGACATGAAT+GGG - chr1_2:56041603-56041622 Msa0078480:five_prime_UTR 40.0%
AAACAATAGACAGCTCAAGC+GGG + chr1_2:56041678-56041697 None:intergenic 40.0%
AAAAACCTACCAACTCAAGG+AGG - chr1_2:56041726-56041745 Msa0078480:intron 40.0%
TGGCAATCATGAAAAGTGAC+AGG + chr1_2:56041806-56041825 None:intergenic 40.0%
GGACTCAGAAACATACAAGT+AGG + chr1_2:56042034-56042053 None:intergenic 40.0%
CTCCTCGCTTATAGAATAGA+CGG - chr1_2:56042188-56042207 Msa0078480:intron 40.0%
TCCTCGCTTATAGAATAGAC+GGG - chr1_2:56042189-56042208 Msa0078480:intron 40.0%
ACAACAAAGATAGGAAGGGT+TGG + chr1_2:56042360-56042379 None:intergenic 40.0%
! TGTGGGTTTCTAATTTGTGG+GGG - chr1_2:56042496-56042515 Msa0078480:five_prime_UTR 40.0%
TTCCTCTGTATTGGACTTCT+GGG + chr1_2:56042525-56042544 None:intergenic 40.0%
ATTCCTCTGTATTGGACTTC+TGG + chr1_2:56042526-56042545 None:intergenic 40.0%
!! AGATGATTTTTGTGGGCTAC+TGG - chr1_2:56042546-56042565 Msa0078480:five_prime_UTR 40.0%
AAGGATGTCAGGAGACAAAA+AGG - chr1_2:56042961-56042980 Msa0078480:five_prime_UTR 40.0%
! CCTTCACTAGTATTGGAGAA+TGG + chr1_2:56043015-56043034 None:intergenic 40.0%
CCATTCTCCAATACTAGTGA+AGG - chr1_2:56043012-56043031 Msa0078480:five_prime_UTR 40.0%
CAAACTCCCTTCACTAGTAT+TGG + chr1_2:56043022-56043041 None:intergenic 40.0%
! TGAAGGGAGTTTGTTTAGTG+AGG - chr1_2:56043029-56043048 Msa0078480:five_prime_UTR 40.0%
AGTACATCAGATGATGAGAC+GGG - chr1_2:56043087-56043106 Msa0078480:five_prime_UTR 40.0%
GAGTGCTTAATTTCTTCAGG+TGG - chr1_2:56043110-56043129 Msa0078480:five_prime_UTR 40.0%
GTCACATGAAACTACAACAG+AGG - chr1_2:56043582-56043601 Msa0078480:five_prime_UTR 40.0%
GAAATTGCGTTGTGATGCGA+GGG + chr1_2:56035751-56035770 None:intergenic 45.0%
AGAAATTGCGTTGTGATGCG+AGG + chr1_2:56035752-56035771 None:intergenic 45.0%
AGTGCGATGAATGTGACGTA+TGG - chr1_2:56036023-56036042 Msa0078480:three_prime_UTR 45.0%
GTGCGATGAATGTGACGTAT+GGG - chr1_2:56036024-56036043 Msa0078480:three_prime_UTR 45.0%
AAAGCGAAGAACAACCGTGT+CGG - chr1_2:56036106-56036125 Msa0078480:exon 45.0%
GAACAATACCGAGGAAACTG+AGG - chr1_2:56036135-56036154 Msa0078480:CDS 45.0%
! CGATTTCTTTGGAGAGAAGG+GGG - chr1_2:56036191-56036210 Msa0078480:CDS 45.0%
AGAGAAGGGGGAATGGTAAT+AGG - chr1_2:56036203-56036222 Msa0078480:CDS 45.0%
ACATGAACCCTCTCTTCCAT+AGG + chr1_2:56036298-56036317 None:intergenic 45.0%
GAAGAGAGGGTTCATGTTCA+GGG - chr1_2:56036301-56036320 Msa0078480:CDS 45.0%
AAGAGAGGGTTCATGTTCAG+GGG - chr1_2:56036302-56036321 Msa0078480:CDS 45.0%
TGAGTTGTTTGAGGGGAAGA+CGG - chr1_2:56036342-56036361 Msa0078480:CDS 45.0%
!!! AAGACGGTGTCGTCGATTTT+CGG - chr1_2:56036358-56036377 Msa0078480:CDS 45.0%
! TAAGGGTGTGCAAGAGAATG+AGG - chr1_2:56036480-56036499 Msa0078480:intron 45.0%
!! AGAATGAGGATAATGGGGCT+GGG - chr1_2:56036494-56036513 Msa0078480:intron 45.0%
! GCTTTTGTCGTTGTCGAAAG+AGG - chr1_2:56036519-56036538 Msa0078480:intron 45.0%
! CTTTGGTTGATATGGGATCG+AGG - chr1_2:56036575-56036594 Msa0078480:intron 45.0%
! GCAGGGTAAGAAGGGTTTTA+AGG - chr1_2:56036597-56036616 Msa0078480:intron 45.0%
TGGAACGAGTAAGTTAGGGA+AGG - chr1_2:56036624-56036643 Msa0078480:intron 45.0%
TTAACCGCATTATGGACACG+CGG + chr1_2:56036658-56036677 None:intergenic 45.0%
GTTGTTCATTCGAGTAAGCG+TGG - chr1_2:56036706-56036725 Msa0078480:intron 45.0%
ATAGGAGTGGGAAGAAGAAG+CGG - chr1_2:56036749-56036768 Msa0078480:intron 45.0%
AACTTCTGATAGAGAGGAGG+TGG - chr1_2:56036777-56036796 Msa0078480:intron 45.0%
AGGAGGTGGATATCAAGAAG+AGG - chr1_2:56036791-56036810 Msa0078480:intron 45.0%
CTATCAGAACTCCTCCTCTT+GGG + chr1_2:56036841-56036860 None:intergenic 45.0%
TCTATCAGAACTCCTCCTCT+TGG + chr1_2:56036842-56036861 None:intergenic 45.0%
GAGAGGATGTTAATCCCAAG+AGG - chr1_2:56036860-56036879 Msa0078480:intron 45.0%
GAGGAAGACTTCTGATAGAG+AGG - chr1_2:56036879-56036898 Msa0078480:intron 45.0%
GAGAGGATGTAGATCACAAG+AGG - chr1_2:56036896-56036915 Msa0078480:intron 45.0%
AGGATGTAGATCACAAGAGG+AGG - chr1_2:56036899-56036918 Msa0078480:intron 45.0%
CGACAGGGATATGGATTTCA+AGG + chr1_2:56037406-56037425 None:intergenic 45.0%
TGAAGACAGAGATCTCGACA+GGG + chr1_2:56037421-56037440 None:intergenic 45.0%
ATGAAGACAGAGATCTCGAC+AGG + chr1_2:56037422-56037441 None:intergenic 45.0%
ATCTCGTTTCATTGTGCCTG+TGG - chr1_2:56037491-56037510 Msa0078480:intron 45.0%
TCTCGTTTCATTGTGCCTGT+GGG - chr1_2:56037492-56037511 Msa0078480:intron 45.0%
! ATGCATCAAGTTGCAAGACG+TGG + chr1_2:56037545-56037564 None:intergenic 45.0%
GGAGGGATGGAAGAAAGTAA+AGG + chr1_2:56038695-56038714 None:intergenic 45.0%
ATTTCAGCTTGGGAGCTTTC+AGG - chr1_2:56038768-56038787 Msa0078480:CDS 45.0%
CTTGCTTCTACAAACAAGGG+CGG - chr1_2:56038910-56038929 Msa0078480:intron 45.0%
CTTCTGTCTGAGGACTCATA+GGG + chr1_2:56038984-56039003 None:intergenic 45.0%
TCTTCTGTCTGAGGACTCAT+AGG + chr1_2:56038985-56039004 None:intergenic 45.0%
! TGGTTCTGCACCAGAACATA+TGG - chr1_2:56039011-56039030 Msa0078480:CDS 45.0%
ACTTTGCATTGTCCAGAGCT+TGG + chr1_2:56039075-56039094 None:intergenic 45.0%
AAAGAAGTCGAGGGATCTGA+AGG - chr1_2:56039336-56039355 Msa0078480:CDS 45.0%
! TCAGATTTGAAGTCCTGGCT+TGG + chr1_2:56039516-56039535 None:intergenic 45.0%
! GTTGTACGAATGATGGTGCA+AGG - chr1_2:56039610-56039629 Msa0078480:CDS 45.0%
GTGCAAGGGATGAAATTCCA+AGG - chr1_2:56039625-56039644 Msa0078480:CDS 45.0%
CGCTCTCTTACATACTTCCT+TGG + chr1_2:56039645-56039664 None:intergenic 45.0%
TCACTAGAACCAACGACACT+TGG + chr1_2:56039801-56039820 None:intergenic 45.0%
! GCGCTTGCAATCCTTTTTGA+TGG + chr1_2:56039842-56039861 None:intergenic 45.0%
TAGTGCCACAGAAAGCTGAA+AGG - chr1_2:56039880-56039899 Msa0078480:CDS 45.0%
TGCTGAGTGATGAAGAGGTA+TGG - chr1_2:56039991-56040010 Msa0078480:CDS 45.0%
! AGTGATGAAGAGGTATGGAC+TGG - chr1_2:56039996-56040015 Msa0078480:CDS 45.0%
ATAGTTCACCTCGTGTACCA+CGG - chr1_2:56040145-56040164 Msa0078480:CDS 45.0%
TTTGTGGCAAGCTACCTGTT+TGG + chr1_2:56040185-56040204 None:intergenic 45.0%
CATGCTAATGAAGCGAGCAT+CGG - chr1_2:56040224-56040243 Msa0078480:CDS 45.0%
! ATCCGTTTAGCTTCGTCTTC+TGG + chr1_2:56040474-56040493 None:intergenic 45.0%
CGAAGCTAAACGGATAGAGA+AGG - chr1_2:56040479-56040498 Msa0078480:intron 45.0%
GCTTCTGTAAAGGAAGAAGG+AGG - chr1_2:56040558-56040577 Msa0078480:intron 45.0%
TTGCAGCTGTCACACATGTA+CGG + chr1_2:56040584-56040603 None:intergenic 45.0%
ACAAATTTCGATCCTCACGG+GGG + chr1_2:56040668-56040687 None:intergenic 45.0%
GACAAATTTCGATCCTCACG+GGG + chr1_2:56040669-56040688 None:intergenic 45.0%
GATGATGATACAGCAACTGC+TGG - chr1_2:56040720-56040739 Msa0078480:intron 45.0%
ATGATACAGCAACTGCTGGA+AGG - chr1_2:56040724-56040743 Msa0078480:intron 45.0%
TGAAAGGAAGCTACCAGGTA+AGG + chr1_2:56040763-56040782 None:intergenic 45.0%
TTACCTGGTAGCTTCCTTTC+AGG - chr1_2:56040762-56040781 Msa0078480:intron 45.0%
TACCTGGTAGCTTCCTTTCA+GGG - chr1_2:56040763-56040782 Msa0078480:intron 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr1_2:56040917-56040936 Msa0078480:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr1_2:56040918-56040937 Msa0078480:intron 45.0%
GAAACTGAACCCGAAGCTTA+AGG + chr1_2:56041091-56041110 None:intergenic 45.0%
GTTGTGCCATATGTGCATCT+AGG - chr1_2:56041169-56041188 Msa0078480:intron 45.0%
CCGAAACCTAGATGCACATA+TGG + chr1_2:56041178-56041197 None:intergenic 45.0%
ATGAGATAATGAGCAAGGGC+AGG - chr1_2:56041359-56041378 Msa0078480:five_prime_UTR 45.0%
CAATCAAGAACAGCTTGGGA+GGG + chr1_2:56041583-56041602 None:intergenic 45.0%
ACAATCAAGAACAGCTTGGG+AGG + chr1_2:56041584-56041603 None:intergenic 45.0%
GTTTGAGGAACCGACATGAA+TGG - chr1_2:56041602-56041621 Msa0078480:five_prime_UTR 45.0%
!! TCAATCCTCCTTGAGTTGGT+AGG + chr1_2:56041734-56041753 None:intergenic 45.0%
AAATGGCCAGTGGGAACTAA+TGG - chr1_2:56041970-56041989 Msa0078480:intron 45.0%
TCCCGTCTATTCTATAAGCG+AGG + chr1_2:56042193-56042212 None:intergenic 45.0%
AGGAAGGGTTGGATCCATAA+TGG + chr1_2:56042349-56042368 None:intergenic 45.0%
TTAAGACCCATAGACTGACC+AGG - chr1_2:56042431-56042450 Msa0078480:five_prime_UTR 45.0%
TATTTCACCGAACCTAGACC+TGG + chr1_2:56042452-56042471 None:intergenic 45.0%
TCCTCTGTATTGGACTTCTG+GGG + chr1_2:56042524-56042543 None:intergenic 45.0%
TTGGTCATTCCTTTGCAGTG+TGG - chr1_2:56042660-56042679 Msa0078480:five_prime_UTR 45.0%
! TAGGAAAAGGCGTAGTAAGC+TGG - chr1_2:56042786-56042805 Msa0078480:five_prime_UTR 45.0%
GAGCTTTACGCTTGCCTTTA+GGG + chr1_2:56042903-56042922 None:intergenic 45.0%
TCTTCAGGGAAGAGCAGTAA+AGG - chr1_2:56042942-56042961 Msa0078480:five_prime_UTR 45.0%
GAAGAGCAGTAAAGGATGTC+AGG - chr1_2:56042950-56042969 Msa0078480:five_prime_UTR 45.0%
CAAAAAGGCGACTCACTAAC+TGG - chr1_2:56042976-56042995 Msa0078480:five_prime_UTR 45.0%
TCATCTGATGTACTTCCTGC+TGG + chr1_2:56043081-56043100 None:intergenic 45.0%
GTACATCAGATGATGAGACG+GGG - chr1_2:56043088-56043107 Msa0078480:five_prime_UTR 45.0%
!! GGGGAGTGCTTAATTTCTTC+AGG - chr1_2:56043107-56043126 Msa0078480:five_prime_UTR 45.0%
TTCTGTCTGAGTCTGTCAAG+TGG - chr1_2:56043201-56043220 Msa0078480:five_prime_UTR 45.0%
TCTGTCTGAGTCTGTCAAGT+GGG - chr1_2:56043202-56043221 Msa0078480:five_prime_UTR 45.0%
CGGTTGTCTCATGCTTGAAA+AGG + chr1_2:56043302-56043321 None:intergenic 45.0%
CAATTGTGGTACTTGTGCGA+AGG - chr1_2:56043473-56043492 Msa0078480:five_prime_UTR 45.0%
TTCAGCTTCACCTTCTCCGA+TGG - chr1_2:56035677-56035696 Msa0078480:three_prime_UTR 50.0%
! TGCGGTGTCAATTTCGACGA+TGG - chr1_2:56035986-56036005 Msa0078480:three_prime_UTR 50.0%
TTTCGACGATGGCGAAGAGA+TGG - chr1_2:56035997-56036016 Msa0078480:three_prime_UTR 50.0%
TATTGTTCTCCGCTCCGACA+CGG + chr1_2:56036123-56036142 None:intergenic 50.0%
! TCTTTGGAGAGAAGGGGGAA+TGG - chr1_2:56036196-56036215 Msa0078480:CDS 50.0%
GGAAGAGAGGGTTCATGTTC+AGG - chr1_2:56036300-56036319 Msa0078480:CDS 50.0%
TGGGGATCCTGAGTTGTTTG+AGG - chr1_2:56036333-56036352 Msa0078480:CDS 50.0%
GGGGATCCTGAGTTGTTTGA+GGG - chr1_2:56036334-56036353 Msa0078480:CDS 50.0%
GGGATCCTGAGTTGTTTGAG+GGG - chr1_2:56036335-56036354 Msa0078480:CDS 50.0%
GTCTTCCCCTCAAACAACTC+AGG + chr1_2:56036343-56036362 None:intergenic 50.0%
CCGGTACATTTCCACAACTG+CGG + chr1_2:56036385-56036404 None:intergenic 50.0%
CCGCAGTTGTGGAAATGTAC+CGG - chr1_2:56036382-56036401 Msa0078480:CDS 50.0%
CGCAGTTGTGGAAATGTACC+GGG - chr1_2:56036383-56036402 Msa0078480:CDS 50.0%
!! GAGAATGAGGATAATGGGGC+TGG - chr1_2:56036493-56036512 Msa0078480:intron 50.0%
!! GAATGAGGATAATGGGGCTG+GGG - chr1_2:56036495-56036514 Msa0078480:intron 50.0%
GAAGTCGCCTGTTACGACTT+TGG - chr1_2:56036558-56036577 Msa0078480:intron 50.0%
GTTGATATGGGATCGAGGCA+GGG - chr1_2:56036580-56036599 Msa0078480:intron 50.0%
TATGCCGCGTGTCCATAATG+CGG - chr1_2:56036651-56036670 Msa0078480:intron 50.0%
TCATTCGAGTAAGCGTGGGA+AGG - chr1_2:56036711-56036730 Msa0078480:intron 50.0%
TAGGAGTGGGAAGAAGAAGC+GGG - chr1_2:56036750-56036769 Msa0078480:intron 50.0%
GAAGAGGACTTCTGACAGAG+AGG - chr1_2:56036807-56036826 Msa0078480:intron 50.0%
GAGAGGATGTTGATCCCAAG+AGG - chr1_2:56036824-56036843 Msa0078480:intron 50.0%
AGGATGTTGATCCCAAGAGG+AGG - chr1_2:56036827-56036846 Msa0078480:intron 50.0%
! GAGGAGGAGTTCTGATAGAG+AGG - chr1_2:56036843-56036862 Msa0078480:intron 50.0%
CAGAGATCTCGACAGGGATA+TGG + chr1_2:56037415-56037434 None:intergenic 50.0%
GGGCGAACGTTGTCAACAAT+TGG - chr1_2:56037512-56037531 Msa0078480:intron 50.0%
TTATGGAGACAGAGGTCCGA+AGG - chr1_2:56037643-56037662 Msa0078480:CDS 50.0%
! CAGAGGTCCGAAGGTTTTCA+AGG - chr1_2:56037652-56037671 Msa0078480:CDS 50.0%
!! TTTTGCTGTGGGTACCACCA+TGG - chr1_2:56037745-56037764 Msa0078480:intron 50.0%
ACAAGGCGTAGTCATTCTGC+TGG - chr1_2:56037830-56037849 Msa0078480:CDS 50.0%
GTAGGGCAGGCATTAAGTAC+AGG + chr1_2:56038072-56038091 None:intergenic 50.0%
ATGGTTTAAGAGAGGCTCGC+AGG - chr1_2:56038414-56038433 Msa0078480:intron 50.0%
TGGTTTAAGAGAGGCTCGCA+GGG - chr1_2:56038415-56038434 Msa0078480:intron 50.0%
AAACAAGGGCGGAGATTGCT+TGG - chr1_2:56038921-56038940 Msa0078480:intron 50.0%
TGTAACCAGCATCCAAGCTC+TGG - chr1_2:56039060-56039079 Msa0078480:CDS 50.0%
ATTGTCCAGAGCTTGGATGC+TGG + chr1_2:56039068-56039087 None:intergenic 50.0%
GAACTGCAAATCACCAAGCC+AGG - chr1_2:56039500-56039519 Msa0078480:CDS 50.0%
AACCAACGACACTTGGAGTC+TGG + chr1_2:56039794-56039813 None:intergenic 50.0%
!! GTGGCTCTGGTTCAACTTAG+AGG + chr1_2:56039931-56039950 None:intergenic 50.0%
! TCAATGATGGTGTGTGGCTC+TGG + chr1_2:56039944-56039963 None:intergenic 50.0%
TAGTTCACCTCGTGTACCAC+GGG - chr1_2:56040146-56040165 Msa0078480:CDS 50.0%
! ACAGGTAGCTTGCCACAAAC+AGG - chr1_2:56040186-56040205 Msa0078480:CDS 50.0%
!! GTAGCACTGGTACCTGTTTG+TGG + chr1_2:56040201-56040220 None:intergenic 50.0%
!! CTAATGAAGCGAGCATCGGT+TGG - chr1_2:56040228-56040247 Msa0078480:CDS 50.0%
AACCGCTGTTTGCAATGGCA+GGG + chr1_2:56040638-56040657 None:intergenic 50.0%
AGGTGAACCGCTGTTTGCAA+TGG + chr1_2:56040643-56040662 None:intergenic 50.0%
CAAATTTCGATCCTCACGGG+GGG + chr1_2:56040667-56040686 None:intergenic 50.0%
CATCAATGAGGAACTCTCCG+AGG - chr1_2:56040688-56040707 Msa0078480:intron 50.0%
CCAGGTAAGGTGTGATGAAC+TGG + chr1_2:56040750-56040769 None:intergenic 50.0%
CCAGTTCATCACACCTTACC+TGG - chr1_2:56040747-56040766 Msa0078480:intron 50.0%
ATCCCTGAAAGGAAGCTACC+AGG + chr1_2:56040768-56040787 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr1_2:56040919-56040938 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr1_2:56040916-56040935 Msa0078480:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG - chr1_2:56040922-56040941 Msa0078480:intron 50.0%
TGTGCATCTAGGTTTCGGCA+TGG - chr1_2:56041180-56041199 Msa0078480:intron 50.0%
CCAACCTTGCCCATTCATGT+CGG + chr1_2:56041615-56041634 None:intergenic 50.0%
ATAGACGGGAAGTAAAGCGC+AGG - chr1_2:56042203-56042222 Msa0078480:intron 50.0%
TAGACGGGAAGTAAAGCGCA+GGG - chr1_2:56042204-56042223 Msa0078480:intron 50.0%
CCTAGACCTGGTCAGTCTAT+GGG + chr1_2:56042440-56042459 None:intergenic 50.0%
ACCTAGACCTGGTCAGTCTA+TGG + chr1_2:56042441-56042460 None:intergenic 50.0%
AGACTGACCAGGTCTAGGTT+CGG - chr1_2:56042442-56042461 Msa0078480:five_prime_UTR 50.0%
ACCCCAGAAGTCCAATACAG+AGG - chr1_2:56042520-56042539 Msa0078480:five_prime_UTR 50.0%
AAAACCAGGCCACACTGCAA+AGG + chr1_2:56042672-56042691 None:intergenic 50.0%
CGAGCTTTACGCTTGCCTTT+AGG + chr1_2:56042904-56042923 None:intergenic 50.0%
AGCGTAAAGCTCGAAAACGC+AGG - chr1_2:56042911-56042930 Msa0078480:five_prime_UTR 50.0%
GTAAAGCTCGAAAACGCAGG+CGG - chr1_2:56042914-56042933 Msa0078480:five_prime_UTR 50.0%
TCACTAACTGGTGAGGACGT+CGG - chr1_2:56042988-56043007 Msa0078480:five_prime_UTR 50.0%
GTTGACAGAATAGGTCCAGC+AGG - chr1_2:56043063-56043082 Msa0078480:five_prime_UTR 50.0%
CTGTCTGAGTCTGTCAAGTG+GGG - chr1_2:56043203-56043222 Msa0078480:five_prime_UTR 50.0%
TGTCTGAGTCTGTCAAGTGG+GGG - chr1_2:56043204-56043223 Msa0078480:five_prime_UTR 50.0%
GCGAAGGACATGTCACTGAT+CGG - chr1_2:56043489-56043508 Msa0078480:five_prime_UTR 50.0%
CACACACACATGCACGCGAT+CGG - chr1_2:56035713-56035732 Msa0078480:three_prime_UTR 55.0%
GCTTACAGAACAGATCGCGG+CGG - chr1_2:56035872-56035891 Msa0078480:intron 55.0%
!! GCGGTGGTGGGAGAATGAAA+GGG - chr1_2:56035894-56035913 Msa0078480:three_prime_UTR 55.0%
ACGAATGGGTCGACGGTTCA+TGG - chr1_2:56035948-56035967 Msa0078480:three_prime_UTR 55.0%
ATGGGTCGACGGTTCATGGA+CGG - chr1_2:56035952-56035971 Msa0078480:three_prime_UTR 55.0%
!! TGGACGGTGGACTGTATCTG+CGG - chr1_2:56035968-56035987 Msa0078480:three_prime_UTR 55.0%
GAAGAACAACCGTGTCGGAG+CGG - chr1_2:56036111-56036130 Msa0078480:exon 55.0%
CTGCGCAACCTCAGTTTCCT+CGG + chr1_2:56036146-56036165 None:intergenic 55.0%
GTTCATGTTCAGGGGATGCC+TGG - chr1_2:56036310-56036329 Msa0078480:CDS 55.0%
ATGTTCAGGGGATGCCTGGT+GGG - chr1_2:56036314-56036333 Msa0078480:CDS 55.0%
AACAACTCAGGATCCCCACC+AGG + chr1_2:56036331-56036350 None:intergenic 55.0%
! CGATTTTCGGACCGCAGTTG+TGG - chr1_2:56036371-56036390 Msa0078480:CDS 55.0%
! GGTTGATATGGGATCGAGGC+AGG - chr1_2:56036579-56036598 Msa0078480:intron 55.0%
GGATCGAGGCAGGGTAAGAA+GGG - chr1_2:56036589-56036608 Msa0078480:intron 55.0%
TGTTGACAACGTTCGCCCAC+AGG + chr1_2:56037510-56037529 None:intergenic 55.0%
CCACGAGGATCTTCTGTCTG+AGG + chr1_2:56038994-56039013 None:intergenic 55.0%
CCTCAGACAGAAGATCCTCG+TGG - chr1_2:56038991-56039010 Msa0078480:CDS 55.0%
TGTTCTGGTGCAGAACCACG+AGG + chr1_2:56039009-56039028 None:intergenic 55.0%
ACTTGGAGTCTGGTGACCCA+GGG + chr1_2:56039784-56039803 None:intergenic 55.0%
! CACCAGACTCCAAGTGTCGT+TGG - chr1_2:56039789-56039808 Msa0078480:CDS 55.0%
AGCTACCTGTTTGGCGTGCA+CGG + chr1_2:56040176-56040195 None:intergenic 55.0%
!! ATGAAGCGAGCATCGGTTGG+AGG - chr1_2:56040231-56040250 Msa0078480:CDS 55.0%
GTTTGCAATGGCAGGGGTTG+TGG + chr1_2:56040631-56040650 None:intergenic 55.0%
ACCCCTGCCATTGCAAACAG+CGG - chr1_2:56040633-56040652 Msa0078480:intron 55.0%
ACCGCTGTTTGCAATGGCAG+GGG + chr1_2:56040637-56040656 None:intergenic 55.0%
GAACCGCTGTTTGCAATGGC+AGG + chr1_2:56040639-56040658 None:intergenic 55.0%
CGACCCCACTTAGTGGGATA+AGG + chr1_2:56040924-56040943 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG + chr1_2:56040930-56040949 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + chr1_2:56040931-56040950 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG - chr1_2:56040930-56040949 Msa0078480:intron 55.0%
ACTCTGCAGTGCTGTGCTAC+CGG - chr1_2:56041399-56041418 Msa0078480:five_prime_UTR 55.0%
GGAACCGACATGAATGGGCA+AGG - chr1_2:56041608-56041627 Msa0078480:five_prime_UTR 55.0%
CCGACATGAATGGGCAAGGT+TGG - chr1_2:56041612-56041631 Msa0078480:five_prime_UTR 55.0%
! TGGGCAAGGTTGGTTGATCG+CGG - chr1_2:56041622-56041641 Msa0078480:intron 55.0%
GTTGGTTGATCGCGGTCCAA+AGG - chr1_2:56041630-56041649 Msa0078480:intron 55.0%
CCCATAGACTGACCAGGTCT+AGG - chr1_2:56042437-56042456 Msa0078480:five_prime_UTR 55.0%
CATTCCTTTGCAGTGTGGCC+TGG - chr1_2:56042665-56042684 Msa0078480:five_prime_UTR 55.0%
AGGCGACTCACTAACTGGTG+AGG - chr1_2:56042981-56043000 Msa0078480:five_prime_UTR 55.0%
GTCTGAGTCTGTCAAGTGGG+GGG - chr1_2:56043205-56043224 Msa0078480:five_prime_UTR 55.0%
TACAGAACAGATCGCGGCGG+CGG - chr1_2:56035875-56035894 Msa0078480:intron 60.0%
!! GGCGGTGGTGGGAGAATGAA+AGG - chr1_2:56035893-56035912 Msa0078480:three_prime_UTR 60.0%
!! TCGTCCGGTGGTGGATCCAT+CGG + chr1_2:56035932-56035951 None:intergenic 60.0%
TGGATCCACCACCGGACGAA+TGG - chr1_2:56035933-56035952 Msa0078480:three_prime_UTR 60.0%
GGATCCACCACCGGACGAAT+GGG - chr1_2:56035934-56035953 Msa0078480:three_prime_UTR 60.0%
GAACCGTCGACCCATTCGTC+CGG + chr1_2:56035947-56035966 None:intergenic 60.0%
CGGAGCGGAGAACAATACCG+AGG - chr1_2:56036126-56036145 Msa0078480:CDS 60.0%
CTAGGGTTGCGTCGTGTTCG+CGG - chr1_2:56036245-56036264 Msa0078480:CDS 60.0%
CGCGGAGGCCGTTTAAGCTT+TGG - chr1_2:56036263-56036282 Msa0078480:CDS 60.0%
CATGTTCAGGGGATGCCTGG+TGG - chr1_2:56036313-56036332 Msa0078480:CDS 60.0%
TGTTCAGGGGATGCCTGGTG+GGG - chr1_2:56036315-56036334 Msa0078480:CDS 60.0%
GGGATCGAGGCAGGGTAAGA+AGG - chr1_2:56036588-56036607 Msa0078480:intron 60.0%
TGCTGTGGGTACCACCATGG+AGG - chr1_2:56037748-56037767 Msa0078480:intron 60.0%
! GGCTCGCAGGGCTTTAATCG+TGG - chr1_2:56038427-56038446 Msa0078480:intron 60.0%
CACTTGGAGTCTGGTGACCC+AGG + chr1_2:56039785-56039804 None:intergenic 60.0%
CTACCTGTTTGGCGTGCACG+GGG + chr1_2:56040174-56040193 None:intergenic 60.0%
GCTACCTGTTTGGCGTGCAC+GGG + chr1_2:56040175-56040194 None:intergenic 60.0%
!! GCGAGCATCGGTTGGAGGAA+AGG - chr1_2:56040236-56040255 Msa0078480:CDS 60.0%
TTTCGATCCTCACGGGGGGA+AGG + chr1_2:56040663-56040682 None:intergenic 60.0%
GCAGTGCTGTGCTACCGGTA+TGG - chr1_2:56041404-56041423 Msa0078480:five_prime_UTR 60.0%
AAGTGGGGGGAGATGCACTG+CGG - chr1_2:56043218-56043237 Msa0078480:five_prime_UTR 60.0%
AGGGCGATCGAATCGCCCGA+TGG - chr1_2:56035913-56035932 Msa0078480:three_prime_UTR 65.0%
TCGCCCGATGGATCCACCAC+CGG - chr1_2:56035925-56035944 Msa0078480:three_prime_UTR 65.0%
!! CGTCCGGTGGTGGATCCATC+GGG + chr1_2:56035931-56035950 None:intergenic 65.0%
TCGACCCATTCGTCCGGTGG+TGG + chr1_2:56035941-56035960 None:intergenic 65.0%
CCACCGGACGAATGGGTCGA+CGG - chr1_2:56035941-56035960 Msa0078480:three_prime_UTR 65.0%
GGTCGACGGTTCATGGACGG+TGG - chr1_2:56035955-56035974 Msa0078480:three_prime_UTR 65.0%
GGAGTCTGGTGACCCAGGGA+TGG + chr1_2:56039780-56039799 None:intergenic 65.0%
GTACCCCGTGCACGCCAAAC+AGG - chr1_2:56040168-56040187 Msa0078480:CDS 65.0%
AGCTCGAAAACGCAGGCGGC+TGG - chr1_2:56042918-56042937 Msa0078480:five_prime_UTR 65.0%
AGAACAGATCGCGGCGGCGG+TGG - chr1_2:56035878-56035897 Msa0078480:three_prime_UTR 70.0%
CCGTCGACCCATTCGTCCGG+TGG + chr1_2:56035944-56035963 None:intergenic 70.0%
GGGTTGCGTCGTGTTCGCGG+AGG - chr1_2:56036248-56036267 Msa0078480:CDS 70.0%
! CGGGGTACCCGTGGTACACG+AGG + chr1_2:56040156-56040175 None:intergenic 70.0%
CGGTTCACCTTCCCCCCGTG+AGG - chr1_2:56040653-56040672 Msa0078480:intron 70.0%
! ACGCAGGCGGCTGGCTCTTC+AGG - chr1_2:56042927-56042946 Msa0078480:five_prime_UTR 70.0%
! CGCAGGCGGCTGGCTCTTCA+GGG - chr1_2:56042928-56042947 Msa0078480:five_prime_UTR 70.0%
ACAGATCGCGGCGGCGGTGG+TGG - chr1_2:56035881-56035900 Msa0078480:three_prime_UTR 75.0%
CAGATCGCGGCGGCGGTGGT+GGG - chr1_2:56035882-56035901 Msa0078480:three_prime_UTR 75.0%
! TGGCGTGCACGGGGTACCCG+TGG + chr1_2:56040165-56040184 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 56035624 56043620 56035624 ID=Msa0078480;Name=Msa0078480
chr1_2 mRNA 56035624 56043620 56035624 ID=Msa0078480-mRNA-1;Parent=Msa0078480;Name=Msa0078480-mRNA-1;_AED=0.04;_eAED=0.04;_QI=1711|0.77|0.9|0.9|0.77|0.7|10|462|719
chr1_2 exon 56035624 56035836 56035624 ID=Msa0078480-mRNA-1:exon:17477;Parent=Msa0078480-mRNA-1
chr1_2 exon 56035876 56036466 56035876 ID=Msa0078480-mRNA-1:exon:17476;Parent=Msa0078480-mRNA-1
chr1_2 exon 56036558 56036566 56036558 ID=Msa0078480-mRNA-1:exon:17475;Parent=Msa0078480-mRNA-1
chr1_2 exon 56037593 56037715 56037593 ID=Msa0078480-mRNA-1:exon:17474;Parent=Msa0078480-mRNA-1
chr1_2 exon 56037824 56037894 56037824 ID=Msa0078480-mRNA-1:exon:17473;Parent=Msa0078480-mRNA-1
chr1_2 exon 56038476 56038830 56038476 ID=Msa0078480-mRNA-1:exon:17472;Parent=Msa0078480-mRNA-1
chr1_2 exon 56038975 56039127 56038975 ID=Msa0078480-mRNA-1:exon:17471;Parent=Msa0078480-mRNA-1
chr1_2 exon 56039237 56040366 56039237 ID=Msa0078480-mRNA-1:exon:17470;Parent=Msa0078480-mRNA-1
chr1_2 exon 56041271 56041638 56041271 ID=Msa0078480-mRNA-1:exon:17469;Parent=Msa0078480-mRNA-1
chr1_2 exon 56042301 56043620 56042301 ID=Msa0078480-mRNA-1:exon:17468;Parent=Msa0078480-mRNA-1
chr1_2 five_prime_UTR 56042301 56043620 56042301 ID=Msa0078480-mRNA-1:five_prime_utr;Parent=Msa0078480-mRNA-1
chr1_2 five_prime_UTR 56041271 56041638 56041271 ID=Msa0078480-mRNA-1:five_prime_utr;Parent=Msa0078480-mRNA-1
chr1_2 five_prime_UTR 56040344 56040366 56040344 ID=Msa0078480-mRNA-1:five_prime_utr;Parent=Msa0078480-mRNA-1
chr1_2 CDS 56039237 56040343 56039237 ID=Msa0078480-mRNA-1:cds;Parent=Msa0078480-mRNA-1
chr1_2 CDS 56038975 56039127 56038975 ID=Msa0078480-mRNA-1:cds;Parent=Msa0078480-mRNA-1
chr1_2 CDS 56038476 56038830 56038476 ID=Msa0078480-mRNA-1:cds;Parent=Msa0078480-mRNA-1
chr1_2 CDS 56037824 56037894 56037824 ID=Msa0078480-mRNA-1:cds;Parent=Msa0078480-mRNA-1
chr1_2 CDS 56037593 56037715 56037593 ID=Msa0078480-mRNA-1:cds;Parent=Msa0078480-mRNA-1
chr1_2 CDS 56036558 56036566 56036558 ID=Msa0078480-mRNA-1:cds;Parent=Msa0078480-mRNA-1
chr1_2 CDS 56036125 56036466 56036125 ID=Msa0078480-mRNA-1:cds;Parent=Msa0078480-mRNA-1
chr1_2 three_prime_UTR 56035876 56036124 56035876 ID=Msa0078480-mRNA-1:three_prime_utr;Parent=Msa0078480-mRNA-1
chr1_2 three_prime_UTR 56035624 56035836 56035624 ID=Msa0078480-mRNA-1:three_prime_utr;Parent=Msa0078480-mRNA-1
Gene Sequence

>Msa0078480

ATGACATTTCTTGCTTCTACAAACAAGGGCGGAGATTGCTTGGAAGCTAATAATGTGGATGAAACTTTAGCAGCAAGAAGCCCTATGAGTCCTCAGACAGAAGATCCTCGTGGTTCTGCACCAGAACATATGGAAAAGCAAGTTTCTCAAGATATTGACTGTAACCAGCATCCAAGCTCTGGACAATGCAAAGTTAAGGCGAAGAGAGAAGATGACAAAGACAAGTTTAAGCACTCTAAGTTTCATTTTTCGTCTATCAGTGATCTTAAAAACAATGGAAAGTCATCTGATCCCACATCTGATATTGGTAAAGTGAATGATGCTGCAGTTCCCAGCTTACCTTTATGTGTAAATAAGGTGGGTGATGTTGGCATATCATCAGAAGTACTCCCTGATAGTCATACCAATGAACTACCTGGTAATTTTTCTCATGGAAAAGAAGTCGAGGGATCTGAAGGTTCCTTTGAAACACAAAAGGGATTCTCAGAAACAAAAGATGGTATGGACTCTGCTAAGAATCCATCAAAATCTGAAGCACTTGAATGTCAAAGTAAAATGCTAGCTTCTGTCCGAAAGACGTCTCCAACTTCATCAATCATGAACTGCAAATCACCAAGCCAGGACTTCAAATCTGAAGATACTGAAACTGCTAATCCTTTTACAAAGCATGGAGCTAAAGCTGACCATAACATTCATACAAAGAATGGAAGTTGTACGAATGATGGTGCAAGGGATGAAATTCCAAGGAAGTATGTAAGAGAGCGTCCAAGATCCTCTTCAAAATCCTCTTTACATTCAAGCCAGAGTACGCAAAATTCTGTTCCAAAGCAAGCAAATCCAGATGTGAGAGATTCTGTTCATTGTTCGTTATCTAAACCATCCCTGGGTCACCAGACTCCAAGTGTCGTTGGTTCTAGTGAGACTAATGCATCAATGCACCATCAAAAAGGATTGCAAGCGCAGAGTAAAACTTCATCTTTAGTGCCACAGAAAGCTGAAAGGCTTAATCAAACAAATACCCATTCTTCCTCTAAGTTGAACCAGAGCCACACACCATCATTGAATCCTTCTCCAACATTAAATTCTTCAATGCTGAGTGATGAAGAGCTAGCTTTGCTATTGCATCAAGAACTGAATAGTTCACCTCGTGTACCACGGGTACCCCGTGCACGCCAAACAGGTAGCTTGCCACAAACAGGTACCAGTGCTACAAACATGCTAATGAAGCGAGCATCGGTTGGAGGAAAGGATAACTATTTGGTATCTAAAAGAAAATACAAGGATGCAACTAGAGATGGGTTTTGCAGTTCTCGTGAACCAGAAGACGAAGCTAAACGGATAGAGAAGGAGAAGGGTCAATCATCATCTGATCAGAGAAAACAAGACACAGCGTATGTGGAAGAAGCTTCTGTAAAGGAAGAAGGAGGCCGTACATGTGTGACAGCTGCAAACTCTATTACAAACAACGTTGTTTCCACAACCCCTGCCATTGCAAACAGCGGTTCACCTTCCCCCCGTGAGGATCGAAATTTGTCATCAATGAGGAACTCTCCGAGGAATATATCTGATGATGATACAGCAACTGCTGGAAGGCCAGTTCATCACACCTTACCTGGCTTAATCAATGAGATAATGAGCAAGGGCAGGCGCATGACATACGAAGAACTCTGCAGTGCTGTGCTACCGCACTGGCCCAACTTAAGAAAACATAATGGAGAGCGATATGCATATGCAAGTCCCTCCCAAGCTGTTCTTGATTGTTTGAGGAACCGACATGAATGGGCAAGGTTGGTTGATCGCGGTCCAAAGTGTGGCCTGACAAATACTAGGAAAAGGCGTAGTAAGCTGGATACTGAAGAATCTGAAGATAATGGATATGACAAAGGTAAATCTGCAAAAGAGACTGATGGGAAGAACTTTGAGTTGCAAAAAGAAGAGTTCCCTAAAGGCAAGCGTAAAGCTCGAAAACGCAGGCGGCTGGCTCTTCAGGGAAGAGCAGTAAAGGATGTCAGGAGACAAAAAGGCGACTCACTAACTGGTGAGGACGTCGGTCCATTCTCCAATACTAGTGAAGGGAGTTTGTTTAGTGAGGATGAAGTTCAAGTTGACAGAATAGGTCCAGCAGGAAGTACATCAGATGATGAGACGGGGAGTGCTTAA
Protein sequence

>Msa0078480

MTFLASTNKGGDCLEANNVDETLAARSPMSPQTEDPRGSAPEHMEKQVSQDIDCNQHPSSGQCKVKAKREDDKDKFKHSKFHFSSISDLKNNGKSSDPTSDIGKVNDAAVPSLPLCVNKVGDVGISSEVLPDSHTNELPGNFSHGKEVEGSEGSFETQKGFSETKDGMDSAKNPSKSEALECQSKMLASVRKTSPTSSIMNCKSPSQDFKSEDTETANPFTKHGAKADHNIHTKNGSCTNDGARDEIPRKYVRERPRSSSKSSLHSSQSTQNSVPKQANPDVRDSVHCSLSKPSLGHQTPSVVGSSETNASMHHQKGLQAQSKTSSLVPQKAERLNQTNTHSSSKLNQSHTPSLNPSPTLNSSMLSDEELALLLHQELNSSPRVPRVPRARQTGSLPQTGTSATNMLMKRASVGGKDNYLVSKRKYKDATRDGFCSSREPEDEAKRIEKEKGQSSSDQRKQDTAYVEEASVKEEGGRTCVTAANSITNNVVSTTPAIANSGSPSPREDRNLSSMRNSPRNISDDDTATAGRPVHHTLPGLINEIMSKGRRMTYEELCSAVLPHWPNLRKHNGERYAYASPSQAVLDCLRNRHEWARLVDRGPKCGLTNTRKRRSKLDTEESEDNGYDKGKSAKETDGKNFELQKEEFPKGKRKARKRRRLALQGRAVKDVRRQKGDSLTGEDVGPFSNTSEGSLFSEDEVQVDRIGPAGSTSDDETGSA*