AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0347950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0347950 MtrunA17_Chr3g0080351 98.460 844 13 0 1 844 1 844 0.0 1759
Msa0347950 MtrunA17_Chr1g0207551 50.000 824 365 9 49 844 7 811 0.0 796
Msa0347950 MtrunA17_Chr2g0329031 45.556 720 342 8 63 750 1 702 0.0 629
Msa0347950 MtrunA17_Chr5g0448761 35.277 669 377 11 68 696 52 704 2.62e-135 421
Msa0347950 MtrunA17_Chr1g0202341 33.175 630 378 9 74 673 49 665 1.01e-115 367
Msa0347950 MtrunA17_Chr2g0291581 34.510 623 365 8 76 673 71 675 9.70e-114 362
Msa0347950 MtrunA17_Chr2g0296781 35.417 576 324 8 80 625 1 558 1.01e-111 358
Msa0347950 MtrunA17_Chr5g0440451 32.722 654 351 11 75 675 42 659 7.12e-110 358
Msa0347950 MtrunA17_Chr5g0441581 32.736 614 368 11 75 662 31 625 1.87e-108 348
Msa0347950 MtrunA17_Chr1g0196541 32.143 644 385 7 80 693 1 622 1.31e-100 328
Msa0347950 MtrunA17_Chr6g0477261 39.855 414 241 3 219 625 35 447 2.53e-100 326
Msa0347950 MtrunA17_Chr3g0118611 35.699 465 289 5 224 684 107 565 5.38e-98 323
Msa0347950 MtrunA17_Chr5g0448511 34.961 512 317 7 231 733 7 511 3.03e-96 311
Msa0347950 MtrunA17_Chr2g0291591 31.440 493 297 4 75 544 63 537 1.94e-86 286
Msa0347950 MtrunA17_Chr2g0287061 30.547 622 365 14 74 675 181 755 9.14e-82 279
Msa0347950 MtrunA17_Chr3g0082121 29.302 645 407 15 59 675 24 647 7.77e-80 271
Msa0347950 MtrunA17_Chr1g0203721 28.754 626 402 5 79 673 66 678 1.38e-79 275
Msa0347950 MtrunA17_Chr8g0363841 29.655 580 351 11 79 623 20 577 1.08e-77 265
Msa0347950 MtrunA17_Chr2g0287651 29.276 649 392 17 80 688 79 700 4.86e-76 265
Msa0347950 MtrunA17_Chr6g0458391 27.549 559 378 6 76 624 225 766 1.47e-75 261
Msa0347950 MtrunA17_Chr2g0324011 26.891 595 393 8 67 633 1 581 1.61e-73 252
Msa0347950 MtrunA17_Chr1g0198761 29.244 595 361 18 79 636 50 621 4.07e-72 252
Msa0347950 MtrunA17_Chr1g0203051 29.289 577 347 15 68 610 72 621 7.79e-66 232
Msa0347950 MtrunA17_Chr2g0294841 27.393 606 383 13 54 618 14 603 3.68e-65 232
Msa0347950 MtrunA17_Chr2g0276841 26.489 638 404 18 76 672 70 683 5.44e-62 222
Msa0347950 MtrunA17_Chr5g0431001 30.275 436 251 11 76 474 61 480 2.04e-53 194
Msa0347950 MtrunA17_Chr2g0290391 26.138 593 363 16 74 621 49 611 6.06e-52 193
Msa0347950 MtrunA17_Chr1g0164591 30.820 305 190 6 172 458 7 308 1.45e-42 158
Msa0347950 MtrunA17_Chr7g0258861 27.393 303 181 7 67 343 1 290 4.88e-27 112
Msa0347950 MtrunA17_Chr2g0329361 34.146 123 70 1 74 196 59 170 2.64e-16 79.7
Msa0347950 MtrunA17_Chr3g0078041 34.127 126 71 1 75 200 49 162 2.04e-15 76.6
Msa0347950 MtrunA17_Chr2g0308841 23.830 235 169 4 399 627 1 231 1.64e-14 74.7
Msa0347950 MtrunA17_Chr1g0149131 27.273 132 86 2 344 475 1 122 6.39e-13 66.2
Msa0347950 MtrunA17_Chr4g0033611 27.027 185 102 5 54 238 55 206 1.08e-12 68.9
Msa0347950 MtrunA17_Chr7g0233911 32.520 123 57 2 75 190 33 136 1.29e-12 68.2
Msa0347950 MtrunA17_Chr2g0329421 31.405 121 69 2 75 195 26 132 4.54e-12 66.2
Msa0347950 MtrunA17_Chr3g0088371 27.044 159 92 5 586 724 1 155 4.49e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0347950 AT3G22170.2 62.618 848 304 8 1 844 1 839 0.0 1090
Msa0347950 AT3G22170.1 62.618 848 304 8 1 844 1 839 0.0 1090
Msa0347950 AT4G15090.1 47.479 853 385 13 27 843 1 826 0.0 791
Msa0347950 AT4G15090.5 47.479 853 385 13 27 843 1 826 0.0 791
Msa0347950 AT4G15090.3 47.479 853 385 13 27 843 1 826 0.0 791
Msa0347950 AT4G15090.2 47.479 853 385 13 27 843 1 826 0.0 791
Msa0347950 AT4G15090.4 47.479 853 385 13 27 843 1 826 0.0 791
Msa0347950 AT1G76320.1 45.891 645 313 5 80 706 1 627 0.0 597
Msa0347950 AT1G76320.4 45.891 645 313 5 80 706 1 627 0.0 597
Msa0347950 AT1G76320.2 45.581 645 315 4 80 706 1 627 0.0 597
Msa0347950 AT1G76320.3 45.581 645 315 4 80 706 1 627 0.0 596
Msa0347950 AT4G19990.3 44.593 749 368 13 73 807 18 733 0.0 551
Msa0347950 AT4G19990.4 44.593 749 368 13 73 807 18 733 0.0 551
Msa0347950 AT4G19990.7 43.709 771 384 14 51 807 13 747 0.0 551
Msa0347950 AT4G19990.6 44.593 749 368 13 73 807 18 733 0.0 551
Msa0347950 AT4G19990.5 44.593 749 368 13 73 807 18 733 0.0 551
Msa0347950 AT4G19990.2 44.593 749 368 13 73 807 18 733 0.0 551
Msa0347950 AT2G32250.6 41.192 738 397 6 78 814 40 741 0.0 541
Msa0347950 AT2G32250.1 41.192 738 397 6 78 814 40 741 0.0 541
Msa0347950 AT2G32250.3 41.192 738 397 6 78 814 40 741 0.0 541
Msa0347950 AT2G32250.5 41.192 738 397 6 78 814 40 741 0.0 540
Msa0347950 AT2G32250.2 41.192 738 397 6 78 814 40 741 0.0 540
Msa0347950 AT2G32250.4 41.192 738 397 6 78 814 40 741 0.0 540
Msa0347950 AT2G32250.8 41.168 736 396 6 80 814 1 700 3.13e-180 538
Msa0347950 AT2G32250.7 41.168 736 396 6 80 814 1 700 3.59e-180 537
Msa0347950 AT4G19990.1 43.909 706 349 13 116 807 4 676 1.01e-168 505
Msa0347950 AT4G38180.1 33.700 727 420 10 73 755 70 778 6.36e-136 424
Msa0347950 AT2G27110.2 32.584 623 361 9 75 675 48 633 4.78e-105 344
Msa0347950 AT2G27110.1 32.584 623 361 9 75 675 48 633 4.78e-105 344
Msa0347950 AT1G80010.1 30.094 638 387 9 76 673 95 713 9.79e-100 326
Msa0347950 AT1G52520.1 32.750 629 370 15 76 673 85 691 3.52e-99 324
Msa0347950 AT2G27110.3 35.684 468 286 6 219 680 34 492 5.30e-95 313
Msa0347950 AT3G06250.2 29.351 678 421 15 16 675 121 758 8.07e-88 295
Msa0347950 AT3G06250.1 29.351 678 421 15 16 675 121 758 8.07e-88 295
Msa0347950 AT3G06250.3 29.351 678 421 15 16 675 121 758 8.07e-88 295
Msa0347950 AT5G18960.2 30.569 615 383 11 69 675 204 782 7.48e-87 293
Msa0347950 AT5G18960.2 32.061 131 63 1 72 202 39 143 4.23e-11 67.4
Msa0347950 AT5G18960.1 30.569 615 383 11 69 675 204 782 7.48e-87 293
Msa0347950 AT5G18960.1 32.061 131 63 1 72 202 39 143 4.23e-11 67.4
Msa0347950 AT4G38170.1 33.404 473 293 8 243 706 21 480 9.59e-84 278
Msa0347950 AT1G10240.2 27.023 655 413 20 73 686 45 675 5.14e-67 236
Msa0347950 AT1G10240.1 27.023 655 413 20 73 686 45 675 5.14e-67 236
Msa0347950 AT5G28530.1 27.059 595 367 15 71 622 50 620 8.45e-57 207
Msa0347950 AT5G28530.3 26.789 601 357 16 71 622 50 616 2.18e-56 206
Msa0347950 AT5G28530.2 26.789 601 357 16 71 622 50 616 2.18e-56 206
Msa0347950 AT5G28530.4 26.165 558 356 16 71 622 50 557 4.31e-44 169
Msa0347950 AT5G28530.5 25.887 564 346 17 71 622 50 553 9.67e-44 168
Msa0347950 AT2G43280.1 29.050 179 110 3 57 230 3 169 3.97e-16 78.6
Msa0347950 AT3G59470.3 31.655 139 81 2 57 195 51 175 1.08e-15 78.2
Msa0347950 AT3G59470.1 31.655 139 81 2 57 195 51 175 1.08e-15 78.2
Msa0347950 AT3G59470.2 31.655 139 81 2 57 195 63 187 1.19e-15 78.6
Msa0347950 AT3G07500.1 34.074 135 69 3 74 206 31 147 4.13e-14 72.8
Msa0347950 AT4G12850.4 33.600 125 66 3 67 190 1 109 9.19e-13 67.0
Msa0347950 AT4G12850.2 33.600 125 66 3 67 190 1 109 1.34e-12 66.2
Msa0347950 AT4G12850.1 33.621 116 61 2 75 190 10 109 1.70e-12 67.4
Msa0347950 AT2G43280.2 28.276 145 87 3 91 230 2 134 8.15e-11 62.0

Find 202 sgRNAs with CRISPR-Local

Find 277 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCGATAAAGTTCGTAATT+TGG 0.150148 3_1:-9566536 Msa0347950:CDS
AGTTGATATTGCAATGTTTA+AGG 0.172219 3_1:-9567028 Msa0347950:CDS
ACAAATCTTGAGCCACTTTC+TGG 0.189659 3_1:-9567000 Msa0347950:CDS
TGTATGAAGATCGCAAATTA+TGG 0.196419 3_1:-9565904 Msa0347950:CDS
CAATAGATGGGAGAAAATTT+TGG 0.200841 3_1:-9565966 Msa0347950:CDS
CACTACCAATTTATATTACT+TGG 0.214287 3_1:-9566274 Msa0347950:CDS
CGTAATTTGGGTCTGGAGTT+TGG 0.217600 3_1:-9566523 Msa0347950:CDS
CTGGTTTCGCATACAACATT+AGG 0.233730 3_1:-9564187 Msa0347950:CDS
GATTGTTCAGTTGAACTTAA+TGG 0.243913 3_1:-9564507 Msa0347950:intron
TTGGTGGTTCTTCAATATTC+TGG 0.244129 3_1:-9565422 Msa0347950:CDS
CTTGTTATTCTTTAGGCTAA+TGG 0.252456 3_1:-9563344 Msa0347950:three_prime_UTR
AGATACCCAAAGTAGAAATA+TGG 0.254157 3_1:-9565105 Msa0347950:CDS
TATTTGCTTATGGCATATAC+TGG 0.255412 3_1:-9566092 Msa0347950:CDS
GTAATTTGGGTCTGGAGTTT+GGG 0.256919 3_1:-9566522 Msa0347950:CDS
TTCGATAAAGTTCGTAATTT+GGG 0.268268 3_1:-9566535 Msa0347950:CDS
TTGTTATTCTTTAGGCTAAT+GGG 0.284129 3_1:-9563343 Msa0347950:three_prime_UTR
CTTGCCATTGTATTTGCTTA+TGG 0.286247 3_1:-9566102 Msa0347950:CDS
AATATTTATAATATTAATAT+AGG 0.290162 3_1:-9563425 Msa0347950:three_prime_UTR
ATGTCTGTTACACTTCTTGA+TGG 0.295055 3_1:-9567304 Msa0347950:five_prime_UTR
CTTTCCCATATTTCTACTTT+GGG 0.301786 3_1:+9565100 None:intergenic
AAGTTTGCTTGTTCCAGATA+TGG 0.304206 3_1:-9566853 Msa0347950:CDS
TGGTCAGTAATTATCACTTT+TGG 0.304400 3_1:+9566169 None:intergenic
CCTTTAGAAAAGAGTGTTGC+AGG 0.305818 3_1:-9565665 Msa0347950:CDS
ATTGTTCAGTTGAACTTAAT+GGG 0.306375 3_1:-9564506 Msa0347950:intron
CCATTGATCGAGCATATTCT+TGG 0.307582 3_1:+9566938 None:intergenic
ACCAGCCACGATGGTTATTA+TGG 0.311286 3_1:-9564335 Msa0347950:CDS
AAGATCCAAGCTGAGATTAT+TGG 0.311613 3_1:-9565617 Msa0347950:CDS
CACACCCAAGTAATATAAAT+TGG 0.315083 3_1:+9566269 None:intergenic
TTGTTTGTTCACTTACTGCC+TGG 0.318808 3_1:+9566635 None:intergenic
TGTCGGCTATTTGAATATAA+AGG 0.333196 3_1:-9565464 Msa0347950:CDS
TCACTATATACATTAAATTA+AGG 0.333884 3_1:-9563736 Msa0347950:intron
TCATCCTGCCTGTCAAGTTT+AGG 0.337518 3_1:+9565578 None:intergenic
TGTTCACAGGGTGCATGATA+TGG 0.338272 3_1:-9565546 Msa0347950:CDS
TCAAAACTTGCAGGCACAAC+TGG 0.350027 3_1:-9564222 Msa0347950:intron
ACTTTCCCATATTTCTACTT+TGG 0.350583 3_1:+9565099 None:intergenic
CAACTGGATTTCTTGCGAAC+TGG 0.365489 3_1:-9564206 Msa0347950:CDS
CCTACAGAAGCTGGTACATC+AGG 0.374818 3_1:-9565155 Msa0347950:CDS
GTAACCCTCGAAGGTTATTA+TGG 0.378451 3_1:-9564636 Msa0347950:CDS
AAAGAAGGCAAGATGGGAAA+TGG 0.381396 3_1:-9566705 Msa0347950:CDS
AAAGTGCCGCAACATATTCT+TGG 0.383004 3_1:-9566231 Msa0347950:CDS
TGGTTTCGCATACAACATTA+GGG 0.384517 3_1:-9564186 Msa0347950:intron
GGATCTTCTTGAATACTGTA+TGG 0.385556 3_1:+9565633 None:intergenic
CCATGACATGACTTTGAAAT+CGG 0.385564 3_1:-9566149 Msa0347950:CDS
TTCATGAAGGATGTGTTCTT+AGG 0.388405 3_1:-9565872 Msa0347950:CDS
AACTGTGGTGCTCTTACATT+AGG 0.389960 3_1:+9563790 None:intergenic
ATATTACAAAATACTGGCCT+TGG 0.392792 3_1:+9563507 None:intergenic
CTTATATTTGTTTCTAACAT+AGG 0.395042 3_1:+9566330 None:intergenic
ATAAACTCAATTGGCCTTTG+AGG 0.400241 3_1:+9563542 None:intergenic
TCTTTGACAAATATGTTCAT+AGG 0.403324 3_1:-9565808 Msa0347950:CDS
AGGCAGAAGTGATGAATGTT+GGG 0.408722 3_1:-9564959 Msa0347950:CDS
AAGAAGGCAAGATGGGAAAT+GGG 0.409702 3_1:-9566704 Msa0347950:CDS
GTATGAAGATCGCAAATTAT+GGG 0.410623 3_1:-9565903 Msa0347950:CDS
ACAGTATGAAACCATCTTGC+AGG 0.419590 3_1:-9565759 Msa0347950:CDS
TCGAGCTCGTGGTCGGTTGA+AGG 0.420065 3_1:+9566807 None:intergenic
TTTGCCAACATAAACTCAAT+TGG 0.421446 3_1:+9563533 None:intergenic
ATTGAGGTACATGCTCTAAA+TGG 0.425596 3_1:-9567072 Msa0347950:CDS
TTTATAATATTAATATAGGT+GGG 0.426007 3_1:-9563421 Msa0347950:three_prime_UTR
ACTTTGGGTATCTTCTTCAA+TGG 0.429012 3_1:+9565115 None:intergenic
AGCATTATATTACAAAATAC+TGG 0.430310 3_1:+9563501 None:intergenic
CCAAGAATATGCTCGATCAA+TGG 0.430685 3_1:-9566938 Msa0347950:CDS
ACATCAAAGCATGCCTGGTT+TGG 0.435777 3_1:-9564309 Msa0347950:intron
CAAAAGCAGATTCTGATACT+TGG 0.440513 3_1:-9565718 Msa0347950:CDS
GATACCCAAAGTAGAAATAT+GGG 0.442097 3_1:-9565104 Msa0347950:CDS
CAAGAATATGCTCGATCAAT+GGG 0.442288 3_1:-9566937 Msa0347950:CDS
GTAATATAAATTGGTAGTGC+TGG 0.445832 3_1:+9566278 None:intergenic
ACTTGGGTGTGCCTTGATAT+CGG 0.447274 3_1:-9566257 Msa0347950:CDS
AATTGACACTTTCAGATCGT+TGG 0.447716 3_1:+9565834 None:intergenic
TAAAGTTCGTAATTTGGGTC+TGG 0.453859 3_1:-9566530 Msa0347950:CDS
CAAGAATCTGAAAATTCAAC+TGG 0.454460 3_1:-9566775 Msa0347950:CDS
TCTTGAGCCACTTTCTGGTA+TGG 0.454926 3_1:-9566995 Msa0347950:CDS
GGCACTTTCATCCGATATCA+AGG 0.461656 3_1:+9566246 None:intergenic
ATGAAACCATCTTGCAGGAC+AGG 0.466060 3_1:-9565754 Msa0347950:CDS
ACCATCGTGGCTGGTTGGTA+TGG 0.466535 3_1:+9564343 None:intergenic
GGGAATCAACAGACTCTTCA+AGG 0.466578 3_1:-9564461 Msa0347950:CDS
GAGGCAGAAGTGATGAATGT+TGG 0.469181 3_1:-9564960 Msa0347950:CDS
TATGGATTGATGCTAAAAGT+AGG 0.472928 3_1:-9566396 Msa0347950:CDS
TGTTTGTTCACTTACTGCCT+GGG 0.477529 3_1:+9566636 None:intergenic
TTCATACCTGTCCTGCAAGA+TGG 0.481351 3_1:+9565748 None:intergenic
TGTTCACTTACTGCCTGGGC+TGG 0.481371 3_1:+9566640 None:intergenic
TTTGTATTCTGCAAACTGCC+TGG 0.482219 3_1:+9566591 None:intergenic
ATTTATAATATTAATATAGG+TGG 0.482485 3_1:-9563422 Msa0347950:three_prime_UTR
GGATAGATTTGAGCTTCGAC+AGG 0.484930 3_1:-9565945 Msa0347950:CDS
TTCTTTCTCATGTTCACCAG+TGG 0.488199 3_1:+9567191 None:intergenic
GATCTTCTTGAATACTGTAT+GGG 0.490261 3_1:+9565634 None:intergenic
ATGAACATATTTGTCAAAGA+AGG 0.490350 3_1:+9565811 None:intergenic
ATTGACACTTTCAGATCGTT+GGG 0.494400 3_1:+9565835 None:intergenic
ATTTGCTTATGGCATATACT+GGG 0.495990 3_1:-9566091 Msa0347950:CDS
GCTGTTATATTAATAAATAT+AGG 0.498076 3_1:-9563481 Msa0347950:three_prime_UTR
GACGCTCAAGCGTGTCTCGA+TGG 0.502862 3_1:+9563757 None:intergenic
AATCTGAACATATGCTGGCT+AGG 0.505661 3_1:-9565322 Msa0347950:CDS
CTGGTTGGTATGGAACTCAT+TGG 0.506086 3_1:+9564353 None:intergenic
TCTTTCTCATGTTCACCAGT+GGG 0.508767 3_1:+9567192 None:intergenic
TGGTGCGCAACAGAGTGTGC+AGG 0.511496 3_1:-9564616 Msa0347950:CDS
CAAATACAATGGCAAGCACT+AGG 0.512004 3_1:+9566109 None:intergenic
AGAAGAATCTGAACATATGC+TGG 0.512248 3_1:-9565327 Msa0347950:CDS
GTATGGAATTCGAGTCTCAT+GGG 0.513881 3_1:-9566978 Msa0347950:CDS
AGCAAGAGTCCTACAGAAGC+TGG 0.514473 3_1:-9565164 Msa0347950:CDS
AAATTACGAACTTTATCGAA+TGG 0.514738 3_1:+9566538 None:intergenic
AACATTGCAATATCAACTGT+GGG 0.516629 3_1:+9567033 None:intergenic
ACTAGACAACATGCAACAAA+TGG 0.519807 3_1:-9564934 Msa0347950:intron
GGACAAAAGATGCAAAAGTC+AGG 0.522255 3_1:-9565361 Msa0347950:CDS
CGTTTCAAAACATATTGAGA+TGG 0.523403 3_1:+9565386 None:intergenic
GAATGTATGCTGTGATGGCC+AGG 0.523831 3_1:-9566609 Msa0347950:CDS
TTATCTTTGTCGACATGCAT+TGG 0.525970 3_1:-9565441 Msa0347950:CDS
GGTATGGAATTCGAGTCTCA+TGG 0.526936 3_1:-9566979 Msa0347950:CDS
ATTGAGATGGGAACACTGAA+TGG 0.527069 3_1:+9565399 None:intergenic
GGTGCACATCAAAGCATGCC+TGG 0.527959 3_1:-9564314 Msa0347950:CDS
AAAATTGCACAATGGAGGTA+TGG 0.528216 3_1:-9567121 Msa0347950:CDS
ATGAGACAAACATTGTTCAC+AGG 0.528939 3_1:-9565559 Msa0347950:CDS
CTTGTCATCCTAAACTTGAC+AGG 0.529447 3_1:-9565586 Msa0347950:CDS
ATTATTTATGTTAGTGACGT+GGG 0.531402 3_1:-9563305 Msa0347950:three_prime_UTR
ACTACCAATTTATATTACTT+GGG 0.533065 3_1:-9566273 Msa0347950:CDS
TGTTGGATTGTAGGTGAACT+CGG 0.535610 3_1:-9564982 Msa0347950:intron
TCATCCTAAACTTGACAGGC+AGG 0.538131 3_1:-9565582 Msa0347950:CDS
GCAGAATACAAAACTGTGGT+TGG 0.538665 3_1:-9566580 Msa0347950:CDS
TGCATTCCATGCACTAAATG+AGG 0.540583 3_1:-9565219 Msa0347950:CDS
AGGTATGGACGACAGACATA+TGG 0.540778 3_1:-9567106 Msa0347950:CDS
GTTTCAAAACATATTGAGAT+GGG 0.541753 3_1:+9565387 None:intergenic
AAAGCAAGTTGTTCTCATCA+TGG 0.542361 3_1:-9567232 Msa0347950:exon
TCATCATGGATATAGATCTC+AGG 0.543112 3_1:-9567218 Msa0347950:exon
GCTGGTACATCAGGGGCTCA+TGG 0.543275 3_1:-9565146 Msa0347950:CDS
TCTTTGTCGACATGCATTGG+TGG 0.544560 3_1:-9565438 Msa0347950:CDS
AAGGCCAATTGAGTTTATGT+TGG 0.545117 3_1:-9563537 Msa0347950:three_prime_UTR
TTCTGATACTTGGAATAAAG+TGG 0.545659 3_1:-9565708 Msa0347950:CDS
ATCTGAACATATGCTGGCTA+GGG 0.545736 3_1:-9565321 Msa0347950:CDS
ATGTATAGGCTAGGAAAATG+AGG 0.546125 3_1:-9563601 Msa0347950:intron
AACACATCCTTCATGAATGT+TGG 0.546900 3_1:+9565878 None:intergenic
AGCTGAGATTATTGGTGCAG+TGG 0.546997 3_1:-9565609 Msa0347950:CDS
CCAACACGTGATGATTACTA+CGG 0.549419 3_1:-9564482 Msa0347950:CDS
GCGCACCATAATAACCTTCG+AGG 0.551435 3_1:+9564631 None:intergenic
TGCATCTATAAATTCTCTTG+AGG 0.551832 3_1:+9566876 None:intergenic
CTTATGGCATATACTGGGGA+AGG 0.554219 3_1:-9566086 Msa0347950:CDS
ACCATAATAACCATCGTGGC+TGG 0.555757 3_1:+9564334 None:intergenic
ATATTAATATAGGTGGGGTA+AGG 0.557263 3_1:-9563415 Msa0347950:three_prime_UTR
TGCTCATCTGATGTAGAGAA+TGG 0.557881 3_1:-9563569 Msa0347950:three_prime_UTR
TGTTATTCTTTAGGCTAATG+GGG 0.558892 3_1:-9563342 Msa0347950:three_prime_UTR
TGCTTGTTCTGTCGAGCTCG+TGG 0.562836 3_1:+9566796 None:intergenic
TAGATCTTGGTGAGGATCAA+CGG 0.563870 3_1:-9566432 Msa0347950:CDS
TCGAATTCCATACCAGAAAG+TGG 0.566016 3_1:+9566988 None:intergenic
TGTGTGCCTCATTTAGTGCA+TGG 0.566180 3_1:+9565213 None:intergenic
ATGAAGGATGTGTTCTTAGG+TGG 0.566472 3_1:-9565869 Msa0347950:CDS
TCACTAAAATTGAGCGAAGA+GGG 0.566685 3_1:-9565269 Msa0347950:CDS
GGTTATTCATAGCTTTGTGA+AGG 0.566920 3_1:-9566683 Msa0347950:CDS
GACAGACATATGGTTGAAGC+TGG 0.568268 3_1:-9567096 Msa0347950:CDS
AATTATTTATGTTAGTGACG+TGG 0.568496 3_1:-9563306 Msa0347950:three_prime_UTR
TTTGGGTCTGGAGTTTGGGG+AGG 0.569035 3_1:-9566518 Msa0347950:CDS
CTATTACAGACATGGCTGAA+AGG 0.571735 3_1:-9566208 Msa0347950:CDS
TGTTCTGTCGAGCTCGTGGT+CGG 0.571836 3_1:+9566800 None:intergenic
TTTAACAAAATCTTGCACAT+AGG 0.572860 3_1:+9565781 None:intergenic
GCAACAGAGTGTGCAGGGAA+TGG 0.572934 3_1:-9564610 Msa0347950:intron
TATGGTTGAAGCTGGTATTG+AGG 0.573490 3_1:-9567088 Msa0347950:CDS
CTGCACCAATAATCTCAGCT+TGG 0.574589 3_1:+9565612 None:intergenic
AACTACACTTGATAACATGT+TGG 0.575276 3_1:-9567154 Msa0347950:CDS
TCAACAGACTCTTCAAGGAC+TGG 0.577433 3_1:-9564456 Msa0347950:intron
CTACAGAAGCTGGTACATCA+GGG 0.582637 3_1:-9565154 Msa0347950:CDS
CTTTAGAAAAGAGTGTTGCA+GGG 0.584026 3_1:-9565664 Msa0347950:CDS
CAGAGGTGTCTTGTATATGT+CGG 0.585513 3_1:-9565481 Msa0347950:CDS
AAGAAGAATGTATGCTGTGA+TGG 0.589551 3_1:-9566614 Msa0347950:CDS
TTATAATATTAATATAGGTG+GGG 0.589807 3_1:-9563420 Msa0347950:three_prime_UTR
AAACATTGCAATATCAACTG+TGG 0.593917 3_1:+9567032 None:intergenic
TAATTTGGGTCTGGAGTTTG+GGG 0.596349 3_1:-9566521 Msa0347950:CDS
GGTGCGCAACAGAGTGTGCA+GGG 0.598023 3_1:-9564615 Msa0347950:CDS
ATGGGCACCAACATTCATGA+AGG 0.600039 3_1:-9565885 Msa0347950:CDS
CCGATTTCAAAGTCATGTCA+TGG 0.600152 3_1:+9566149 None:intergenic
CAACACGTGATGATTACTAC+GGG 0.600808 3_1:-9564481 Msa0347950:CDS
CAGACATGGCTGAAAGGTGT+AGG 0.601180 3_1:-9566202 Msa0347950:CDS
TGCAAAAGTCAGGAATGTCA+CGG 0.602820 3_1:-9565351 Msa0347950:CDS
GCAAAAGTCAGGAATGTCAC+GGG 0.606359 3_1:-9565350 Msa0347950:CDS
TAATAACCATCGTGGCTGGT+TGG 0.607504 3_1:+9564338 None:intergenic
CCTGATGTACCAGCTTCTGT+AGG 0.610024 3_1:+9565155 None:intergenic
ATCAAGAAGTGTAACAGACA+TGG 0.610103 3_1:+9567306 None:intergenic
TTTATGTTGGCAAATCTCCA+AGG 0.615209 3_1:-9563524 Msa0347950:three_prime_UTR
GCAGGACAGGTATGAAGAGG+AGG 0.615423 3_1:-9565741 Msa0347950:CDS
CGCACCATAATAACCTTCGA+GGG 0.615700 3_1:+9564632 None:intergenic
ACACTTGATAACATGTTGGA+AGG 0.620645 3_1:-9567150 Msa0347950:CDS
GAGGTACATGCTCTAAATGG+TGG 0.620892 3_1:-9567069 Msa0347950:CDS
CATTGCAATATCAACTGTGG+GGG 0.621147 3_1:+9567035 None:intergenic
ATCACTAAAATTGAGCGAAG+AGG 0.621826 3_1:-9565270 Msa0347950:CDS
GGTGAATGAAGTAAAATCAG+AGG 0.623034 3_1:-9565498 Msa0347950:CDS
AACAAAACAATCTCTACATG+AGG 0.623988 3_1:+9563379 None:intergenic
ATTCTTGGCTATTACAGACA+TGG 0.625085 3_1:-9566216 Msa0347950:CDS
TTATGCAGTAGATCTTGGTG+AGG 0.626878 3_1:-9566440 Msa0347950:CDS
ATAGATCTCAGGTTACCCAC+TGG 0.627040 3_1:-9567207 Msa0347950:CDS
CTTGCAGGACAGGTATGAAG+AGG 0.628672 3_1:-9565744 Msa0347950:CDS
TAGAGAATGGAATACCTCAA+AGG 0.631467 3_1:-9563556 Msa0347950:three_prime_UTR
TCCATACCAACCAGCCACGA+TGG 0.649328 3_1:-9564344 Msa0347950:CDS
TGAGACAAACATTGTTCACA+GGG 0.652768 3_1:-9565558 Msa0347950:CDS
CCGTAGTAATCATCACGTGT+TGG 0.653378 3_1:+9564482 None:intergenic
TTAGTGAAACATACCAAACC+AGG 0.659731 3_1:+9564296 None:intergenic
TTTGCTTATGGCATATACTG+GGG 0.662956 3_1:-9566090 Msa0347950:CDS
GGCAGAAGTGATGAATGTTG+GGG 0.664453 3_1:-9564958 Msa0347950:CDS
ACATGGCTGAAAGGTGTAGG+TGG 0.667199 3_1:-9566199 Msa0347950:CDS
TACAGAAGCTGGTACATCAG+GGG 0.668012 3_1:-9565153 Msa0347950:CDS
TATGCCATAAGCAAATACAA+TGG 0.671446 3_1:+9566098 None:intergenic
AGAACTGCAGTAACCCTCGA+AGG 0.680930 3_1:-9564645 Msa0347950:CDS
TATGGAATTCGAGTCTCATG+GGG 0.685488 3_1:-9566977 Msa0347950:CDS
GATGGATCTTCGTGTAACTG+TGG 0.687451 3_1:+9563775 None:intergenic
TAATAGCCAAGAATATGTTG+CGG 0.691526 3_1:+9566225 None:intergenic
ACATTGCAATATCAACTGTG+GGG 0.697658 3_1:+9567034 None:intergenic
GTTTGCAGAATACAAAACTG+TGG 0.699066 3_1:-9566584 Msa0347950:CDS
TGGATTGTAGGTGAACTCGG+AGG 0.756855 3_1:-9564979 Msa0347950:intron
GTGCACCATAATAACCATCG+TGG 0.809451 3_1:+9564330 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATTTATAATATTAATAT+AGG - chr3_1:9567165-9567184 Msa0347950:CDS 0.0%
!!! TAAAAAAAATGAGAATTTTA+TGG - chr3_1:9564552-9564571 Msa0347950:intron 10.0%
!! ATTTATAATATTAATATAGG+TGG - chr3_1:9567168-9567187 Msa0347950:CDS 10.0%
!! TTTATAATATTAATATAGGT+GGG - chr3_1:9567169-9567188 Msa0347950:CDS 10.0%
!!! TTCTCATTTTTTTTAATTAC+AGG + chr3_1:9564547-9564566 None:intergenic 15.0%
!! AAAAAAAAAAAAAATCCTCT+AGG + chr3_1:9565826-9565845 None:intergenic 15.0%
!!! TATAATGGTAATTTTTTGAA+CGG + chr3_1:9566466-9566485 None:intergenic 15.0%
!! TCACTATATACATTAAATTA+AGG - chr3_1:9566854-9566873 Msa0347950:CDS 15.0%
!!! TCACATTATTTTAAATGTAT+AGG - chr3_1:9566975-9566994 Msa0347950:CDS 15.0%
!! GCTGTTATATTAATAAATAT+AGG - chr3_1:9567109-9567128 Msa0347950:CDS 15.0%
!! TTATAATATTAATATAGGTG+GGG - chr3_1:9567170-9567189 Msa0347950:CDS 15.0%
!!! ATAAAAACTTGTTATTCTTT+AGG - chr3_1:9567239-9567258 Msa0347950:five_prime_UTR 15.0%
!!! CTTATATTTGTTTCTAACAT+AGG + chr3_1:9564263-9564282 None:intergenic 20.0%
!! ACTACCAATTTATATTACTT+GGG - chr3_1:9564317-9564336 Msa0347950:CDS 20.0%
!! AGTTTGAAAAATGCATATAT+AGG - chr3_1:9564578-9564597 Msa0347950:intron 20.0%
!!! GTTTTTTTTAACTAGATATG+AGG + chr3_1:9565767-9565786 None:intergenic 20.0%
!!! GATCAAAGATTTAATTTTTC+AGG + chr3_1:9566552-9566571 None:intergenic 20.0%
!!! ATTTAGTTTACAAGATTGTA+GGG + chr3_1:9566699-9566718 None:intergenic 20.0%
!!! AATTTAGTTTACAAGATTGT+AGG + chr3_1:9566700-9566719 None:intergenic 20.0%
!!! TTATTTTAAATGTATAGGCT+AGG - chr3_1:9566980-9566999 Msa0347950:CDS 20.0%
!! AGCATTATATTACAAAATAC+TGG + chr3_1:9567092-9567111 None:intergenic 20.0%
!!! ACTTGCTTTGATGATTTTAA+GGG + chr3_1:9563347-9563366 None:intergenic 25.0%
!!! AACTTGCTTTGATGATTTTA+AGG + chr3_1:9563348-9563367 None:intergenic 25.0%
!! AGTTGATATTGCAATGTTTA+AGG - chr3_1:9563562-9563581 Msa0347950:three_prime_UTR 25.0%
! AAATTACGAACTTTATCGAA+TGG + chr3_1:9564055-9564074 None:intergenic 25.0%
! ATTCGATAAAGTTCGTAATT+TGG - chr3_1:9564054-9564073 Msa0347950:intron 25.0%
! TTCGATAAAGTTCGTAATTT+GGG - chr3_1:9564055-9564074 Msa0347950:intron 25.0%
! CACTACCAATTTATATTACT+TGG - chr3_1:9564316-9564335 Msa0347950:CDS 25.0%
!!! TGATGATTTTGACAATAGAT+GGG - chr3_1:9564612-9564631 Msa0347950:CDS 25.0%
! ATGAACATATTTGTCAAAGA+AGG + chr3_1:9564782-9564801 None:intergenic 25.0%
! TCTTTGACAAATATGTTCAT+AGG - chr3_1:9564782-9564801 Msa0347950:intron 25.0%
! TTTAACAAAATCTTGCACAT+AGG + chr3_1:9564812-9564831 None:intergenic 25.0%
! GTTTCAAAACATATTGAGAT+GGG + chr3_1:9565206-9565225 None:intergenic 25.0%
!!! CATCTCAATATGTTTTGAAA+CGG - chr3_1:9565205-9565224 Msa0347950:CDS 25.0%
! GAATCCAACTAAAAAGAAAA+AGG - chr3_1:9565527-9565546 Msa0347950:CDS 25.0%
!!! CAAACCTTTTTCTTTTTAGT+TGG + chr3_1:9565534-9565553 None:intergenic 25.0%
! ATATGATCAAACACTTTGAT+AGG + chr3_1:9565707-9565726 None:intergenic 25.0%
!! AGTGTTTGATCATATACTTT+TGG - chr3_1:9565712-9565731 Msa0347950:CDS 25.0%
! AAAAACAATACAAGACTTGT+TGG - chr3_1:9565781-9565800 Msa0347950:CDS 25.0%
!!! TTTTTTTATCAAGCATGAAG+TGG - chr3_1:9565844-9565863 Msa0347950:CDS 25.0%
!!! TTTTTTATCAAGCATGAAGT+GGG - chr3_1:9565845-9565864 Msa0347950:CDS 25.0%
!! TTAAAAGGAACTTCTTTTGT+AGG - chr3_1:9565908-9565927 Msa0347950:CDS 25.0%
! ATTGTTCAGTTGAACTTAAT+GGG - chr3_1:9566084-9566103 Msa0347950:CDS 25.0%
!! ACAAACTATTTTATGTGTGT+AGG - chr3_1:9566212-9566231 Msa0347950:CDS 25.0%
!! CAAACTATTTTATGTGTGTA+GGG - chr3_1:9566213-9566232 Msa0347950:CDS 25.0%
! GTATTCATCAAACATTACAA+GGG + chr3_1:9566340-9566359 None:intergenic 25.0%
! AGTATTCATCAAACATTACA+AGG + chr3_1:9566341-9566360 None:intergenic 25.0%
! GAACGGTAATAATATCTAAA+AGG + chr3_1:9566449-9566468 None:intergenic 25.0%
! TTTGATCACATTAATCTTGT+TGG - chr3_1:9566565-9566584 Msa0347950:CDS 25.0%
! TTGATCACATTAATCTTGTT+GGG - chr3_1:9566566-9566585 Msa0347950:CDS 25.0%
! GTTTGAGAAATTTCAATTCA+AGG - chr3_1:9566630-9566649 Msa0347950:CDS 25.0%
!! GAATCAACAAAATTTCAAGT+TGG + chr3_1:9566657-9566676 None:intergenic 25.0%
!! TTGTTATTCTTTAGGCTAAT+GGG - chr3_1:9567247-9567266 Msa0347950:five_prime_UTR 25.0%
! AATTATTTATGTTAGTGACG+TGG - chr3_1:9567284-9567303 Msa0347950:five_prime_UTR 25.0%
! ATTATTTATGTTAGTGACGT+GGG - chr3_1:9567285-9567304 Msa0347950:five_prime_UTR 25.0%
! AACTACACTTGATAACATGT+TGG - chr3_1:9563436-9563455 Msa0347950:three_prime_UTR 30.0%
AACATTGCAATATCAACTGT+GGG + chr3_1:9563560-9563579 None:intergenic 30.0%
AAACATTGCAATATCAACTG+TGG + chr3_1:9563561-9563580 None:intergenic 30.0%
! ATTCTCTTGAGGTTTTTGAA+CGG + chr3_1:9563706-9563725 None:intergenic 30.0%
TGCATCTATAAATTCTCTTG+AGG + chr3_1:9563717-9563736 None:intergenic 30.0%
CAAGAATCTGAAAATTCAAC+TGG - chr3_1:9563815-9563834 Msa0347950:intron 30.0%
ATGTAAAAAGAAGGCAAGAT+GGG - chr3_1:9563879-9563898 Msa0347950:intron 30.0%
! TTCTTTTATGCAGTAGATCT+TGG - chr3_1:9564145-9564164 Msa0347950:intron 30.0%
! AACGGCTGAAAAATCTTTTA+TGG - chr3_1:9564176-9564195 Msa0347950:intron 30.0%
! TATGGATTGATGCTAAAAGT+AGG - chr3_1:9564194-9564213 Msa0347950:CDS 30.0%
!! GTAATATAAATTGGTAGTGC+TGG + chr3_1:9564315-9564334 None:intergenic 30.0%
CACACCCAAGTAATATAAAT+TGG + chr3_1:9564324-9564343 None:intergenic 30.0%
TAATAGCCAAGAATATGTTG+CGG + chr3_1:9564368-9564387 None:intergenic 30.0%
! TGGTCAGTAATTATCACTTT+TGG + chr3_1:9564424-9564443 None:intergenic 30.0%
TATGCCATAAGCAAATACAA+TGG + chr3_1:9564495-9564514 None:intergenic 30.0%
TATTTGCTTATGGCATATAC+TGG - chr3_1:9564498-9564517 Msa0347950:CDS 30.0%
ATTTGCTTATGGCATATACT+GGG - chr3_1:9564499-9564518 Msa0347950:CDS 30.0%
!! GTGATGATTTTGACAATAGA+TGG - chr3_1:9564611-9564630 Msa0347950:CDS 30.0%
! CAATAGATGGGAGAAAATTT+TGG - chr3_1:9564624-9564643 Msa0347950:CDS 30.0%
TGTATGAAGATCGCAAATTA+TGG - chr3_1:9564686-9564705 Msa0347950:intron 30.0%
GTATGAAGATCGCAAATTAT+GGG - chr3_1:9564687-9564706 Msa0347950:intron 30.0%
TTCTGATACTTGGAATAAAG+TGG - chr3_1:9564882-9564901 Msa0347950:intron 30.0%
GATCTTCTTGAATACTGTAT+GGG + chr3_1:9564959-9564978 None:intergenic 30.0%
! TGTCGGCTATTTGAATATAA+AGG - chr3_1:9565126-9565145 Msa0347950:CDS 30.0%
CGTTTCAAAACATATTGAGA+TGG + chr3_1:9565207-9565226 None:intergenic 30.0%
AGATACCCAAAGTAGAAATA+TGG - chr3_1:9565485-9565504 Msa0347950:CDS 30.0%
GATACCCAAAGTAGAAATAT+GGG - chr3_1:9565486-9565505 Msa0347950:CDS 30.0%
! CTTTCCCATATTTCTACTTT+GGG + chr3_1:9565493-9565512 None:intergenic 30.0%
! ACTTTCCCATATTTCTACTT+TGG + chr3_1:9565494-9565513 None:intergenic 30.0%
GTTATGACAGGAAGAATAAA+AGG + chr3_1:9565583-9565602 None:intergenic 30.0%
GATAGGTTAACTAGTAATGT+AGG + chr3_1:9565690-9565709 None:intergenic 30.0%
TGAGCTTGTAGATTAAATAC+AGG - chr3_1:9565741-9565760 Msa0347950:CDS 30.0%
ACGTCATGCTTATAGTTAAA+AGG - chr3_1:9565893-9565912 Msa0347950:CDS 30.0%
CAACTGAACAATCAAATAAG+AGG + chr3_1:9566076-9566095 None:intergenic 30.0%
GATTGTTCAGTTGAACTTAA+TGG - chr3_1:9566083-9566102 Msa0347950:CDS 30.0%
! ATACAACATTAGGGTTAGTA+TGG - chr3_1:9566413-9566432 Msa0347950:CDS 30.0%
ATTATAATCCTTGAAGTCGT+GGG - chr3_1:9566480-9566499 Msa0347950:CDS 30.0%
! ATAATGTTGCTTCTTCATTG+TGG - chr3_1:9566768-9566787 Msa0347950:CDS 30.0%
TTTGCCAACATAAACTCAAT+TGG + chr3_1:9567060-9567079 None:intergenic 30.0%
! ATATTACAAAATACTGGCCT+TGG + chr3_1:9567086-9567105 None:intergenic 30.0%
ATATTAATATAGGTGGGGTA+AGG - chr3_1:9567175-9567194 Msa0347950:CDS 30.0%
AACAAAACAATCTCTACATG+AGG + chr3_1:9567214-9567233 None:intergenic 30.0%
!! CTTGTTATTCTTTAGGCTAA+TGG - chr3_1:9567246-9567265 Msa0347950:five_prime_UTR 30.0%
TGTTATTCTTTAGGCTAATG+GGG - chr3_1:9567248-9567267 Msa0347950:five_prime_UTR 30.0%
! ATCAAGAAGTGTAACAGACA+TGG + chr3_1:9563287-9563306 None:intergenic 35.0%
ATGTCTGTTACACTTCTTGA+TGG - chr3_1:9563286-9563305 Msa0347950:three_prime_UTR 35.0%
AAAGCAAGTTGTTCTCATCA+TGG - chr3_1:9563358-9563377 Msa0347950:three_prime_UTR 35.0%
TCATCATGGATATAGATCTC+AGG - chr3_1:9563372-9563391 Msa0347950:three_prime_UTR 35.0%
! ACACTTGATAACATGTTGGA+AGG - chr3_1:9563440-9563459 Msa0347950:three_prime_UTR 35.0%
GGTGAAGAAAAATTGCACAA+TGG - chr3_1:9563461-9563480 Msa0347950:three_prime_UTR 35.0%
GAAGAAAAATTGCACAATGG+AGG - chr3_1:9563464-9563483 Msa0347950:three_prime_UTR 35.0%
AAAATTGCACAATGGAGGTA+TGG - chr3_1:9563469-9563488 Msa0347950:three_prime_UTR 35.0%
! ATTGAGGTACATGCTCTAAA+TGG - chr3_1:9563518-9563537 Msa0347950:three_prime_UTR 35.0%
ACATTGCAATATCAACTGTG+GGG + chr3_1:9563559-9563578 None:intergenic 35.0%
CAAGAATATGCTCGATCAAT+GGG - chr3_1:9563653-9563672 Msa0347950:intron 35.0%
! AAGTTTGCTTGTTCCAGATA+TGG - chr3_1:9563737-9563756 Msa0347950:three_prime_UTR 35.0%
CAAGCATGCATGTAAAAAGA+AGG - chr3_1:9563870-9563889 Msa0347950:intron 35.0%
CATGTAAAAAGAAGGCAAGA+TGG - chr3_1:9563878-9563897 Msa0347950:intron 35.0%
!! GGTTATTCATAGCTTTGTGA+AGG - chr3_1:9563907-9563926 Msa0347950:intron 35.0%
AAGAAGAATGTATGCTGTGA+TGG - chr3_1:9563976-9563995 Msa0347950:intron 35.0%
GTTTGCAGAATACAAAACTG+TGG - chr3_1:9564006-9564025 Msa0347950:intron 35.0%
TAAAGTTCGTAATTTGGGTC+TGG - chr3_1:9564060-9564079 Msa0347950:intron 35.0%
ATTCTTGGCTATTACAGACA+TGG - chr3_1:9564374-9564393 Msa0347950:intron 35.0%
!! CCATGACATGACTTTGAAAT+CGG - chr3_1:9564441-9564460 Msa0347950:intron 35.0%
CTTGCCATTGTATTTGCTTA+TGG - chr3_1:9564488-9564507 Msa0347950:CDS 35.0%
TTTGCTTATGGCATATACTG+GGG - chr3_1:9564500-9564519 Msa0347950:CDS 35.0%
AACACATCCTTCATGAATGT+TGG + chr3_1:9564715-9564734 None:intergenic 35.0%
TTCATGAAGGATGTGTTCTT+AGG - chr3_1:9564718-9564737 Msa0347950:intron 35.0%
ATTGACACTTTCAGATCGTT+GGG + chr3_1:9564758-9564777 None:intergenic 35.0%
AATTGACACTTTCAGATCGT+TGG + chr3_1:9564759-9564778 None:intergenic 35.0%
CAAAAGCAGATTCTGATACT+TGG - chr3_1:9564872-9564891 Msa0347950:intron 35.0%
!! ACACTCTTTTCTAAAGGTGA+AGG + chr3_1:9564922-9564941 None:intergenic 35.0%
!! CTTTAGAAAAGAGTGTTGCA+GGG - chr3_1:9564926-9564945 Msa0347950:intron 35.0%
GGATCTTCTTGAATACTGTA+TGG + chr3_1:9564960-9564979 None:intergenic 35.0%
AAGATCCAAGCTGAGATTAT+TGG - chr3_1:9564973-9564992 Msa0347950:intron 35.0%
ATGAGACAAACATTGTTCAC+AGG - chr3_1:9565031-9565050 Msa0347950:intron 35.0%
TGAGACAAACATTGTTCACA+GGG - chr3_1:9565032-9565051 Msa0347950:intron 35.0%
!!! AAACAGAGACTTTTTTGTCG+TGG - chr3_1:9565071-9565090 Msa0347950:CDS 35.0%
GGTGAATGAAGTAAAATCAG+AGG - chr3_1:9565092-9565111 Msa0347950:CDS 35.0%
TTATCTTTGTCGACATGCAT+TGG - chr3_1:9565149-9565168 Msa0347950:CDS 35.0%
! TTGGTGGTTCTTCAATATTC+TGG - chr3_1:9565168-9565187 Msa0347950:CDS 35.0%
!!! CTCAATATGTTTTGAAACGG+TGG - chr3_1:9565208-9565227 Msa0347950:CDS 35.0%
AGAAGAATCTGAACATATGC+TGG - chr3_1:9565263-9565282 Msa0347950:CDS 35.0%
ATCACTAAAATTGAGCGAAG+AGG - chr3_1:9565320-9565339 Msa0347950:CDS 35.0%
TCACTAAAATTGAGCGAAGA+GGG - chr3_1:9565321-9565340 Msa0347950:CDS 35.0%
ACTTTGGGTATCTTCTTCAA+TGG + chr3_1:9565478-9565497 None:intergenic 35.0%
ACTAGACAACATGCAACAAA+TGG - chr3_1:9565656-9565675 Msa0347950:CDS 35.0%
AGGTTAACTAGTAATGTAGG+AGG + chr3_1:9565687-9565706 None:intergenic 35.0%
TACTATATACGTGAACCTAG+AGG - chr3_1:9565808-9565827 Msa0347950:CDS 35.0%
TTAGTGAAACATACCAAACC+AGG + chr3_1:9566297-9566316 None:intergenic 35.0%
CTTATACGATCAAAACTTGC+AGG - chr3_1:9566359-9566378 Msa0347950:CDS 35.0%
TGGTTTCGCATACAACATTA+GGG - chr3_1:9566404-9566423 Msa0347950:CDS 35.0%
CACGACTTCAAGGATTATAA+TGG + chr3_1:9566481-9566500 None:intergenic 35.0%
CATTATAATCCTTGAAGTCG+TGG - chr3_1:9566479-9566498 Msa0347950:CDS 35.0%
TTATAATCCTTGAAGTCGTG+GGG - chr3_1:9566481-9566500 Msa0347950:CDS 35.0%
!! GACTCTGAAATTGTCTCAAA+CGG - chr3_1:9566600-9566619 Msa0347950:CDS 35.0%
ATGTATAGGCTAGGAAAATG+AGG - chr3_1:9566989-9567008 Msa0347950:CDS 35.0%
TAGAGAATGGAATACCTCAA+AGG - chr3_1:9567034-9567053 Msa0347950:CDS 35.0%
!! ATAAACTCAATTGGCCTTTG+AGG + chr3_1:9567051-9567070 None:intergenic 35.0%
AAGGCCAATTGAGTTTATGT+TGG - chr3_1:9567053-9567072 Msa0347950:CDS 35.0%
TTTATGTTGGCAAATCTCCA+AGG - chr3_1:9567066-9567085 Msa0347950:CDS 35.0%
TCTTTCTCATGTTCACCAGT+GGG + chr3_1:9563401-9563420 None:intergenic 40.0%
TTCTTTCTCATGTTCACCAG+TGG + chr3_1:9563402-9563421 None:intergenic 40.0%
TATGGTTGAAGCTGGTATTG+AGG - chr3_1:9563502-9563521 Msa0347950:three_prime_UTR 40.0%
CATTGCAATATCAACTGTGG+GGG + chr3_1:9563558-9563577 None:intergenic 40.0%
! ACAAATCTTGAGCCACTTTC+TGG - chr3_1:9563590-9563609 Msa0347950:three_prime_UTR 40.0%
TCGAATTCCATACCAGAAAG+TGG + chr3_1:9563605-9563624 None:intergenic 40.0%
GTATGGAATTCGAGTCTCAT+GGG - chr3_1:9563612-9563631 Msa0347950:intron 40.0%
TATGGAATTCGAGTCTCATG+GGG - chr3_1:9563613-9563632 Msa0347950:intron 40.0%
CCATTGATCGAGCATATTCT+TGG + chr3_1:9563655-9563674 None:intergenic 40.0%
CCAAGAATATGCTCGATCAA+TGG - chr3_1:9563652-9563671 Msa0347950:intron 40.0%
!! CTCTCGTTTTGTTCCATATC+TGG + chr3_1:9563753-9563772 None:intergenic 40.0%
AAAGAAGGCAAGATGGGAAA+TGG - chr3_1:9563885-9563904 Msa0347950:intron 40.0%
AAGAAGGCAAGATGGGAAAT+GGG - chr3_1:9563886-9563905 Msa0347950:intron 40.0%
TGTTTGTTCACTTACTGCCT+GGG + chr3_1:9563957-9563976 None:intergenic 40.0%
TTGTTTGTTCACTTACTGCC+TGG + chr3_1:9563958-9563977 None:intergenic 40.0%
TTTGTATTCTGCAAACTGCC+TGG + chr3_1:9564002-9564021 None:intergenic 40.0%
GCAGAATACAAAACTGTGGT+TGG - chr3_1:9564010-9564029 Msa0347950:intron 40.0%
! GTAATTTGGGTCTGGAGTTT+GGG - chr3_1:9564068-9564087 Msa0347950:intron 40.0%
! TAATTTGGGTCTGGAGTTTG+GGG - chr3_1:9564069-9564088 Msa0347950:intron 40.0%
TTATGCAGTAGATCTTGGTG+AGG - chr3_1:9564150-9564169 Msa0347950:intron 40.0%
TAGATCTTGGTGAGGATCAA+CGG - chr3_1:9564158-9564177 Msa0347950:intron 40.0%
!! ATGCCTCTTGCACTTTTTGT+TGG - chr3_1:9564283-9564302 Msa0347950:intron 40.0%
!! TGCCTCTTGCACTTTTTGTT+GGG - chr3_1:9564284-9564303 Msa0347950:intron 40.0%
!! AAAGTGCCGCAACATATTCT+TGG - chr3_1:9564359-9564378 Msa0347950:CDS 40.0%
CTATTACAGACATGGCTGAA+AGG - chr3_1:9564382-9564401 Msa0347950:intron 40.0%
CCGATTTCAAAGTCATGTCA+TGG + chr3_1:9564444-9564463 None:intergenic 40.0%
CAAATACAATGGCAAGCACT+AGG + chr3_1:9564484-9564503 None:intergenic 40.0%
ATGAAGGATGTGTTCTTAGG+TGG - chr3_1:9564721-9564740 Msa0347950:intron 40.0%
ACAGTATGAAACCATCTTGC+AGG - chr3_1:9564831-9564850 Msa0347950:intron 40.0%
! CCTGCAACACTCTTTTCTAA+AGG + chr3_1:9564928-9564947 None:intergenic 40.0%
!! CCTTTAGAAAAGAGTGTTGC+AGG - chr3_1:9564925-9564944 Msa0347950:intron 40.0%
CTTGTCATCCTAAACTTGAC+AGG - chr3_1:9565004-9565023 Msa0347950:intron 40.0%
!! CAGAGGTGTCTTGTATATGT+CGG - chr3_1:9565109-9565128 Msa0347950:CDS 40.0%
ATTGAGATGGGAACACTGAA+TGG + chr3_1:9565194-9565213 None:intergenic 40.0%
GGACAAAAGATGCAAAAGTC+AGG - chr3_1:9565229-9565248 Msa0347950:CDS 40.0%
TGCAAAAGTCAGGAATGTCA+CGG - chr3_1:9565239-9565258 Msa0347950:CDS 40.0%
! AATCTGAACATATGCTGGCT+AGG - chr3_1:9565268-9565287 Msa0347950:CDS 40.0%
! ATCTGAACATATGCTGGCTA+GGG - chr3_1:9565269-9565288 Msa0347950:CDS 40.0%
TGCATTCCATGCACTAAATG+AGG - chr3_1:9565371-9565390 Msa0347950:CDS 40.0%
TAACCTCCTTGTTGGATTGT+AGG - chr3_1:9565599-9565618 Msa0347950:CDS 40.0%
AGTTCACCTACAATCCAACA+AGG + chr3_1:9565608-9565627 None:intergenic 40.0%
TGTTGGATTGTAGGTGAACT+CGG - chr3_1:9565608-9565627 Msa0347950:CDS 40.0%
AGGCAGAAGTGATGAATGTT+GGG - chr3_1:9565631-9565650 Msa0347950:CDS 40.0%
GTAACCCTCGAAGGTTATTA+TGG - chr3_1:9565954-9565973 Msa0347950:CDS 40.0%
CCAACACGTGATGATTACTA+CGG - chr3_1:9566108-9566127 Msa0347950:CDS 40.0%
CAACACGTGATGATTACTAC+GGG - chr3_1:9566109-9566128 Msa0347950:CDS 40.0%
CTGGTTTCGCATACAACATT+AGG - chr3_1:9566403-9566422 Msa0347950:CDS 40.0%
AACTGTGGTGCTCTTACATT+AGG + chr3_1:9566803-9566822 None:intergenic 40.0%
TGCTCATCTGATGTAGAGAA+TGG - chr3_1:9567021-9567040 Msa0347950:CDS 40.0%
ATAGATCTCAGGTTACCCAC+TGG - chr3_1:9563383-9563402 Msa0347950:three_prime_UTR 45.0%
AGGTATGGACGACAGACATA+TGG - chr3_1:9563484-9563503 Msa0347950:three_prime_UTR 45.0%
GACAGACATATGGTTGAAGC+TGG - chr3_1:9563494-9563513 Msa0347950:three_prime_UTR 45.0%
! GAGGTACATGCTCTAAATGG+TGG - chr3_1:9563521-9563540 Msa0347950:three_prime_UTR 45.0%
! TCTTGAGCCACTTTCTGGTA+TGG - chr3_1:9563595-9563614 Msa0347950:three_prime_UTR 45.0%
GGTATGGAATTCGAGTCTCA+TGG - chr3_1:9563611-9563630 Msa0347950:intron 45.0%
! CGTAATTTGGGTCTGGAGTT+TGG - chr3_1:9564067-9564086 Msa0347950:intron 45.0%
!! GCCTCTTGCACTTTTTGTTG+GGG - chr3_1:9564285-9564304 Msa0347950:intron 45.0%
! ACCCCAACAAAAAGTGCAAG+AGG + chr3_1:9564289-9564308 None:intergenic 45.0%
ACTTGGGTGTGCCTTGATAT+CGG - chr3_1:9564333-9564352 Msa0347950:CDS 45.0%
GGCACTTTCATCCGATATCA+AGG + chr3_1:9564347-9564366 None:intergenic 45.0%
CTTATGGCATATACTGGGGA+AGG - chr3_1:9564504-9564523 Msa0347950:intron 45.0%
GGATAGATTTGAGCTTCGAC+AGG - chr3_1:9564645-9564664 Msa0347950:CDS 45.0%
ATGGGCACCAACATTCATGA+AGG - chr3_1:9564705-9564724 Msa0347950:intron 45.0%
ATGAAACCATCTTGCAGGAC+AGG - chr3_1:9564836-9564855 Msa0347950:intron 45.0%
TTCATACCTGTCCTGCAAGA+TGG + chr3_1:9564845-9564864 None:intergenic 45.0%
CTGCACCAATAATCTCAGCT+TGG + chr3_1:9564981-9565000 None:intergenic 45.0%
AGCTGAGATTATTGGTGCAG+TGG - chr3_1:9564981-9565000 Msa0347950:intron 45.0%
TCATCCTAAACTTGACAGGC+AGG - chr3_1:9565008-9565027 Msa0347950:intron 45.0%
TCATCCTGCCTGTCAAGTTT+AGG + chr3_1:9565015-9565034 None:intergenic 45.0%
TGTTCACAGGGTGCATGATA+TGG - chr3_1:9565044-9565063 Msa0347950:intron 45.0%
TCTTTGTCGACATGCATTGG+TGG - chr3_1:9565152-9565171 Msa0347950:CDS 45.0%
GCAAAAGTCAGGAATGTCAC+GGG - chr3_1:9565240-9565259 Msa0347950:CDS 45.0%
TGTGTGCCTCATTTAGTGCA+TGG + chr3_1:9565380-9565399 None:intergenic 45.0%
CTACAGAAGCTGGTACATCA+GGG - chr3_1:9565436-9565455 Msa0347950:CDS 45.0%
TACAGAAGCTGGTACATCAG+GGG - chr3_1:9565437-9565456 Msa0347950:CDS 45.0%
TCCTGTCATAACCTCCTTGT+TGG - chr3_1:9565591-9565610 Msa0347950:CDS 45.0%
TCCAACAAGGAGGTTATGAC+AGG + chr3_1:9565595-9565614 None:intergenic 45.0%
TCACCTACAATCCAACAAGG+AGG + chr3_1:9565605-9565624 None:intergenic 45.0%
GAGGCAGAAGTGATGAATGT+TGG - chr3_1:9565630-9565649 Msa0347950:CDS 45.0%
GGCAGAAGTGATGAATGTTG+GGG - chr3_1:9565632-9565651 Msa0347950:CDS 45.0%
CGCACCATAATAACCTTCGA+GGG + chr3_1:9565961-9565980 None:intergenic 45.0%
CCGTAGTAATCATCACGTGT+TGG + chr3_1:9566111-9566130 None:intergenic 45.0%
GGGAATCAACAGACTCTTCA+AGG - chr3_1:9566129-9566148 Msa0347950:CDS 45.0%
TCAACAGACTCTTCAAGGAC+TGG - chr3_1:9566134-9566153 Msa0347950:CDS 45.0%
! GGACTGGTGTGTAGAAGAAA+TGG - chr3_1:9566150-9566169 Msa0347950:CDS 45.0%
! CTGGTTGGTATGGAACTCAT+TGG + chr3_1:9566240-9566259 None:intergenic 45.0%
TAATAACCATCGTGGCTGGT+TGG + chr3_1:9566255-9566274 None:intergenic 45.0%
ACCAGCCACGATGGTTATTA+TGG - chr3_1:9566255-9566274 Msa0347950:CDS 45.0%
ACCATAATAACCATCGTGGC+TGG + chr3_1:9566259-9566278 None:intergenic 45.0%
GTGCACCATAATAACCATCG+TGG + chr3_1:9566263-9566282 None:intergenic 45.0%
ACATCAAAGCATGCCTGGTT+TGG - chr3_1:9566281-9566300 Msa0347950:CDS 45.0%
TCAAAACTTGCAGGCACAAC+TGG - chr3_1:9566368-9566387 Msa0347950:CDS 45.0%
CAACTGGATTTCTTGCGAAC+TGG - chr3_1:9566384-9566403 Msa0347950:CDS 45.0%
! TGTTGCTTCTTCATTGTGGC+AGG - chr3_1:9566772-9566791 Msa0347950:CDS 45.0%
GATGGATCTTCGTGTAACTG+TGG + chr3_1:9566818-9566837 None:intergenic 45.0%
! TCACGAACTTTTACCAGCCC+AGG - chr3_1:9563937-9563956 Msa0347950:intron 50.0%
GAATGTATGCTGTGATGGCC+AGG - chr3_1:9563981-9564000 Msa0347950:intron 50.0%
! CAGACATGGCTGAAAGGTGT+AGG - chr3_1:9564388-9564407 Msa0347950:intron 50.0%
! ACATGGCTGAAAGGTGTAGG+TGG - chr3_1:9564391-9564410 Msa0347950:intron 50.0%
CTTGCAGGACAGGTATGAAG+AGG - chr3_1:9564846-9564865 Msa0347950:intron 50.0%
AGCAAGAGTCCTACAGAAGC+TGG - chr3_1:9565426-9565445 Msa0347950:CDS 50.0%
CCTGATGTACCAGCTTCTGT+AGG + chr3_1:9565438-9565457 None:intergenic 50.0%
CCTACAGAAGCTGGTACATC+AGG - chr3_1:9565435-9565454 Msa0347950:CDS 50.0%
TGGATTGTAGGTGAACTCGG+AGG - chr3_1:9565611-9565630 Msa0347950:CDS 50.0%
AGAACTGCAGTAACCCTCGA+AGG - chr3_1:9565945-9565964 Msa0347950:CDS 50.0%
GCGCACCATAATAACCTTCG+AGG + chr3_1:9565962-9565981 None:intergenic 50.0%
TGTTCTGTCGAGCTCGTGGT+CGG + chr3_1:9563793-9563812 None:intergenic 55.0%
TGCTTGTTCTGTCGAGCTCG+TGG + chr3_1:9563797-9563816 None:intergenic 55.0%
TGTTCACTTACTGCCTGGGC+TGG + chr3_1:9563953-9563972 None:intergenic 55.0%
! TTTGGGTCTGGAGTTTGGGG+AGG - chr3_1:9564072-9564091 Msa0347950:intron 55.0%
GCAGGACAGGTATGAAGAGG+AGG - chr3_1:9564849-9564868 Msa0347950:intron 55.0%
GCAACAGAGTGTGCAGGGAA+TGG - chr3_1:9565980-9565999 Msa0347950:CDS 55.0%
TCCATACCAACCAGCCACGA+TGG - chr3_1:9566246-9566265 Msa0347950:CDS 55.0%
! ACCATCGTGGCTGGTTGGTA+TGG + chr3_1:9566250-9566269 None:intergenic 55.0%
GGTGCACATCAAAGCATGCC+TGG - chr3_1:9566276-9566295 Msa0347950:CDS 55.0%
GTTCGATCCCCACGACTTCA+AGG + chr3_1:9566491-9566510 None:intergenic 55.0%
TCGAGCTCGTGGTCGGTTGA+AGG + chr3_1:9563786-9563805 None:intergenic 60.0%
GCTGGTACATCAGGGGCTCA+TGG - chr3_1:9565444-9565463 Msa0347950:CDS 60.0%
TGGTGCGCAACAGAGTGTGC+AGG - chr3_1:9565974-9565993 Msa0347950:CDS 60.0%
GGTGCGCAACAGAGTGTGCA+GGG - chr3_1:9565975-9565994 Msa0347950:CDS 60.0%
GACGCTCAAGCGTGTCTCGA+TGG + chr3_1:9566836-9566855 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 9563284 9567328 9563284 ID=Msa0347950;Name=Msa0347950
chr3_1 mRNA 9563284 9567328 9563284 ID=Msa0347950-mRNA-1;Parent=Msa0347950;Name=Msa0347950-mRNA-1;_AED=0.00;_eAED=0.00;_QI=93|1|1|1|0.85|0.87|8|357|844
chr3_1 exon 9563284 9563615 9563284 ID=Msa0347950-mRNA-1:exon:2716;Parent=Msa0347950-mRNA-1
chr3_1 exon 9563737 9563818 9563737 ID=Msa0347950-mRNA-1:exon:2715;Parent=Msa0347950-mRNA-1
chr3_1 exon 9564187 9564231 9564187 ID=Msa0347950-mRNA-1:exon:2714;Parent=Msa0347950-mRNA-1
chr3_1 exon 9564310 9564378 9564310 ID=Msa0347950-mRNA-1:exon:2713;Parent=Msa0347950-mRNA-1
chr3_1 exon 9564457 9564519 9564457 ID=Msa0347950-mRNA-1:exon:2712;Parent=Msa0347950-mRNA-1
chr3_1 exon 9564611 9564682 9564611 ID=Msa0347950-mRNA-1:exon:2711;Parent=Msa0347950-mRNA-1
chr3_1 exon 9564935 9564991 9564935 ID=Msa0347950-mRNA-1:exon:2710;Parent=Msa0347950-mRNA-1
chr3_1 exon 9565064 9567328 9565064 ID=Msa0347950-mRNA-1:exon:2709;Parent=Msa0347950-mRNA-1
chr3_1 five_prime_UTR 9567236 9567328 9567236 ID=Msa0347950-mRNA-1:five_prime_utr;Parent=Msa0347950-mRNA-1
chr3_1 CDS 9565064 9567235 9565064 ID=Msa0347950-mRNA-1:cds;Parent=Msa0347950-mRNA-1
chr3_1 CDS 9564935 9564991 9564935 ID=Msa0347950-mRNA-1:cds;Parent=Msa0347950-mRNA-1
chr3_1 CDS 9564611 9564682 9564611 ID=Msa0347950-mRNA-1:cds;Parent=Msa0347950-mRNA-1
chr3_1 CDS 9564457 9564519 9564457 ID=Msa0347950-mRNA-1:cds;Parent=Msa0347950-mRNA-1
chr3_1 CDS 9564310 9564378 9564310 ID=Msa0347950-mRNA-1:cds;Parent=Msa0347950-mRNA-1
chr3_1 CDS 9564187 9564231 9564187 ID=Msa0347950-mRNA-1:cds;Parent=Msa0347950-mRNA-1
chr3_1 CDS 9563762 9563818 9563762 ID=Msa0347950-mRNA-1:cds;Parent=Msa0347950-mRNA-1
chr3_1 three_prime_UTR 9563737 9563761 9563737 ID=Msa0347950-mRNA-1:three_prime_utr;Parent=Msa0347950-mRNA-1
chr3_1 three_prime_UTR 9563284 9563615 9563284 ID=Msa0347950-mRNA-1:three_prime_utr;Parent=Msa0347950-mRNA-1
Gene Sequence

>Msa0347950

ATGGATATAGATCTCAGGTTACCCACTGGTGAACATGAGAAAGAAGAAGAAGAAGAAACAACTACACTTGATAACATGTTGGAAGGTGAAGAAAAATTGCACAATGGAGGTATGGACGACAGACATATGGTTGAAGCTGGTATTGAGGTACATGCTCTAAATGGTGGAGATCTGAATTCCCCCACAGTTGATATTGCAATGTTTAAGGAAGATACAAATCTTGAGCCACTTTCTGGTATGGAATTCGAGTCTCATGGGGAAGCTTATTCTTTCTACCAAGAATATGCTCGATCAATGGGATTCAACACTGCAATACAAAATAGTCGCCGTTCAAAAACCTCAAGAGAATTTATAGATGCAAAGTTTGCTTGTTCCAGATATGGAACAAAACGAGAGTACGATAAATCCTTCAACCGACCACGAGCTCGACAGAACAAGCAAGAATCTGAAAATTCAACTGGTCGAAGATCTTGCTCTAAGACTGATTGTAAAGCAAGCATGCATGTAAAAAGAAGGCAAGATGGGAAATGGGTTATTCATAGCTTTGTGAAGGAGCATAATCACGAACTTTTACCAGCCCAGGCAGTAAGTGAACAAACAAGAAGAATGTATGCTGTGATGGCCAGGCAGTTTGCAGAATACAAAACTGTGGTTGGTATCAAGAATGAAAAGAATCCATTCGATAAAGTTCGTAATTTGGGTCTGGAGTTTGGGGAGGCTAAACTTATGCTTGATTTTTTTATTCAGATGCAAAGTATGAATTCTAACTTCTTTTATGCAGTAGATCTTGGTGAGGATCAACGGCTGAAAAATCTTTTATGGATTGATGCTAAAAGTAGGCATGACTATATCAACTTCTCTGATGTAGTGTCATTTGATACGACCTATGTTAGAAACAAATATAAGATGCCTCTTGCACTTTTTGTTGGGGTGAACCAGCACTACCAATTTATATTACTTGGGTGTGCCTTGATATCGGATGAAAGTGCCGCAACATATTCTTGGCTATTACAGACATGGCTGAAAGGTGTAGGTGGTCAAGTTCCAAAAGTGATAATTACTGACCATGACATGACTTTGAAATCGGTTATTTCAGATGTATTTCCTAGTGCTTGCCATTGTATTTGCTTATGGCATATACTGGGGAAGGTATCTGAAAATTTAGCTCCTGTAATTAAAAAAAATGAGAATTTTATGGCAAAGTTTGAAAAATGCATATATAGGTCATTGACAAGTGATGATTTTGACAATAGATGGGAGAAAATTTTGGATAGATTTGAGCTTCGACAGGATGAATGCATGCAGTCTTTGTATGAAGATCGCAAATTATGGGCACCAACATTCATGAAGGATGTGTTCTTAGGTGGCATGTCTACTGCCCAACGATCTGAAAGTGTCAATTCCTTCTTTGACAAATATGTTCATAGGAAGACCTATGTGCAAGATTTTGTTAAACAGTATGAAACCATCTTGCAGGACAGGTATGAAGAGGAGGCAAAAGCAGATTCTGATACTTGGAATAAAGTGGCAACATTGAAAACTCCTTCACCTTTAGAAAAGAGTGTTGCAGGGATTTGCACCCATACAGTATTCAAGAAGATCCAAGCTGAGATTATTGGTGCAGTGGCTTGTCATCCTAAACTTGACAGGCAGGATGAGACAAACATTGTTCACAGGGTGCATGATATGGAAATAAACAGAGACTTTTTTGTCGTGGTGAATGAAGTAAAATCAGAGGTGTCTTGTATATGTCGGCTATTTGAATATAAAGGTTATCTTTGTCGACATGCATTGGTGGTTCTTCAATATTCTGGCCATTCAGTGTTCCCATCTCAATATGTTTTGAAACGGTGGACAAAAGATGCAAAAGTCAGGAATGTCACGGGAGAAGAATCTGAACATATGCTGGCTAGGGTGCAACGATACAATGATTTATGTCATCGATCACTAAAATTGAGCGAAGAGGGATCATTGTCTCAAGATAGTTATAGTATTGCATTCCATGCACTAAATGAGGCACACAAAAGTTGTGTGAGTGTTAACAATTCTAGCAAGAGTCCTACAGAAGCTGGTACATCAGGGGCTCATGGTCAGCTTTCCATTGAAGAAGATACCCAAAGTAGAAATATGGGAAAGTCAAACAAAAAGAAGAATCCAACTAAAAAGAAAAAGGTGAACTCGGAGGCAGAAGTGATGAATGTTGGGGCACTAGACAACATGCAACAAATGGACAAATTCAGCACAAGAACTGCAGTAACCCTCGAAGGTTATTATGGTGCGCAACAGAGTGTGCAGGGAATGTTGAACTTAATGGGACCAACACGTGATGATTACTACGGGAATCAACAGACTCTTCAAGGACTGGGACCAATGAGTTCCATACCAACCAGCCACGATGGTTATTATGGTGCACATCAAAGCATGCCTGGTTTGGCACAACTGGATTTCTTGCGAACTGGTTTCGCATACAACATTAGGGATGAACCTAATGTAAGAGCACCACAGTTACACGAAGATCCATCGAGACACGCTTGA
Protein sequence

>Msa0347950

MDIDLRLPTGEHEKEEEEETTTLDNMLEGEEKLHNGGMDDRHMVEAGIEVHALNGGDLNSPTVDIAMFKEDTNLEPLSGMEFESHGEAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSFNRPRARQNKQESENSTGRRSCSKTDCKASMHVKRRQDGKWVIHSFVKEHNHELLPAQAVSEQTRRMYAVMARQFAEYKTVVGIKNEKNPFDKVRNLGLEFGEAKLMLDFFIQMQSMNSNFFYAVDLGEDQRLKNLLWIDAKSRHDYINFSDVVSFDTTYVRNKYKMPLALFVGVNQHYQFILLGCALISDESAATYSWLLQTWLKGVGGQVPKVIITDHDMTLKSVISDVFPSACHCICLWHILGKVSENLAPVIKKNENFMAKFEKCIYRSLTSDDFDNRWEKILDRFELRQDECMQSLYEDRKLWAPTFMKDVFLGGMSTAQRSESVNSFFDKYVHRKTYVQDFVKQYETILQDRYEEEAKADSDTWNKVATLKTPSPLEKSVAGICTHTVFKKIQAEIIGAVACHPKLDRQDETNIVHRVHDMEINRDFFVVVNEVKSEVSCICRLFEYKGYLCRHALVVLQYSGHSVFPSQYVLKRWTKDAKVRNVTGEESEHMLARVQRYNDLCHRSLKLSEEGSLSQDSYSIAFHALNEAHKSCVSVNNSSKSPTEAGTSGAHGQLSIEEDTQSRNMGKSNKKKNPTKKKKVNSEAEVMNVGALDNMQQMDKFSTRTAVTLEGYYGAQQSVQGMLNLMGPTRDDYYGNQQTLQGLGPMSSIPTSHDGYYGAHQSMPGLAQLDFLRTGFAYNIRDEPNVRAPQLHEDPSRHA*