Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435260 | XP_003608626.1 | 97.561 | 246 | 2 | 2 | 1 | 244 | 62 | 305 | 4.87e-173 | 504 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435260 | sp|Q8RX22|MIP1_ARATH | 52.033 | 246 | 97 | 4 | 2 | 243 | 55 | 283 | 8.41e-63 | 211 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435260 | G7JGH0 | 97.561 | 246 | 2 | 2 | 1 | 244 | 62 | 305 | 2.33e-173 | 504 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003220 | Msa1435260 | 0.845187 | 4.749904e-59 | -8.615850e-47 |
| Msa0003270 | Msa1435260 | 0.815299 | 9.926506e-52 | -8.615850e-47 |
| Msa0005620 | Msa1435260 | 0.801094 | 1.059073e-48 | -8.615850e-47 |
| Msa0009100 | Msa1435260 | 0.800601 | 1.335028e-48 | -8.615850e-47 |
| Msa0010770 | Msa1435260 | 0.811703 | 6.130541e-51 | -8.615850e-47 |
| Msa0013540 | Msa1435260 | 0.837636 | 4.625308e-57 | -8.615850e-47 |
| Msa0026430 | Msa1435260 | 0.824892 | 6.310616e-54 | -8.615850e-47 |
| Msa0031180 | Msa1435260 | 0.836774 | 7.683523e-57 | -8.615850e-47 |
| Msa0035150 | Msa1435260 | 0.829098 | 6.225039e-55 | -8.615850e-47 |
| Msa0036970 | Msa1435260 | 0.805092 | 1.577003e-49 | -8.615850e-47 |
| Msa0037120 | Msa1435260 | 0.851853 | 6.768163e-61 | -8.615850e-47 |
| Msa0040620 | Msa1435260 | 0.801184 | 1.015128e-48 | -8.615850e-47 |
| Msa0041690 | Msa1435260 | 0.820344 | 7.206638e-53 | -8.615850e-47 |
| Msa0054530 | Msa1435260 | 0.865984 | 3.970184e-65 | -8.615850e-47 |
| Msa0054820 | Msa1435260 | 0.825419 | 4.735317e-54 | -8.615850e-47 |
| Msa0055660 | Msa1435260 | 0.811249 | 7.693652e-51 | -8.615850e-47 |
| Msa0061340 | Msa1435260 | 0.801575 | 8.438913e-49 | -8.615850e-47 |
| Msa0064110 | Msa1435260 | 0.802898 | 4.507962e-49 | -8.615850e-47 |
| Msa0064920 | Msa1435260 | 0.889243 | 2.883671e-73 | -8.615850e-47 |
| Msa0068430 | Msa1435260 | 0.800523 | 1.384828e-48 | -8.615850e-47 |
| Msa0070370 | Msa1435260 | 0.824754 | 6.802063e-54 | -8.615850e-47 |
| Msa0074750 | Msa1435260 | 0.845796 | 3.247358e-59 | -8.615850e-47 |
| Msa0076700 | Msa1435260 | 0.802323 | 5.923331e-49 | -8.615850e-47 |
| Msa0078060 | Msa1435260 | 0.814990 | 1.162319e-51 | -8.615850e-47 |
| Msa0078480 | Msa1435260 | 0.824953 | 6.102480e-54 | -8.615850e-47 |
| Msa0082440 | Msa1435260 | 0.836423 | 9.443008e-57 | -8.615850e-47 |
| Msa0084340 | Msa1435260 | 0.861115 | 1.286959e-63 | -8.615850e-47 |
| Msa0085370 | Msa1435260 | 0.804802 | 1.813519e-49 | -8.615850e-47 |
| Msa0089980 | Msa1435260 | 0.812298 | 4.549389e-51 | -8.615850e-47 |
| Msa0090010 | Msa1435260 | 0.807481 | 4.949724e-50 | -8.615850e-47 |
| Msa0090660 | Msa1435260 | 0.808966 | 2.388722e-50 | -8.615850e-47 |
| Msa0091780 | Msa1435260 | 0.869012 | 4.258896e-66 | -8.615850e-47 |
| Msa0092440 | Msa1435260 | 0.838680 | 2.490082e-57 | -8.615850e-47 |
| Msa0092940 | Msa1435260 | 0.803081 | 4.132411e-49 | -8.615850e-47 |
| Msa0094130 | Msa1435260 | 0.811519 | 6.721667e-51 | -8.615850e-47 |
| Msa0096580 | Msa1435260 | 0.813618 | 2.337016e-51 | -8.615850e-47 |
| Msa0116270 | Msa1435260 | 0.836673 | 8.154756e-57 | -8.615850e-47 |
| Msa0119320 | Msa1435260 | 0.801870 | 7.341901e-49 | -8.615850e-47 |
| Msa1348360 | Msa1435260 | 0.810274 | 1.250225e-50 | -8.615850e-47 |
| Msa1349450 | Msa1435260 | 0.816064 | 6.702612e-52 | -8.615850e-47 |
| Msa1352150 | Msa1435260 | 0.836011 | 1.201512e-56 | -8.615850e-47 |
| Msa1353540 | Msa1435260 | 0.809604 | 1.743337e-50 | -8.615850e-47 |
| Msa1365350 | Msa1435260 | 0.807931 | 3.971238e-50 | -8.615850e-47 |
| Msa1366550 | Msa1435260 | 0.818988 | 1.470455e-52 | -8.615850e-47 |
| Msa1372290 | Msa1435260 | 0.821789 | 3.349633e-53 | -8.615850e-47 |
| Msa1376370 | Msa1435260 | 0.800471 | 1.418791e-48 | -8.615850e-47 |
| Msa1390350 | Msa1435260 | 0.824895 | 6.297653e-54 | -8.615850e-47 |
| Msa1391720 | Msa1435260 | 0.820075 | 8.304958e-53 | -8.615850e-47 |
| Msa1393800 | Msa1435260 | 0.826014 | 3.421357e-54 | -8.615850e-47 |
| Msa1393820 | Msa1435260 | 0.810393 | 1.178479e-50 | -8.615850e-47 |
| Msa1396020 | Msa1435260 | 0.810312 | 1.227225e-50 | -8.615850e-47 |
| Msa1401460 | Msa1435260 | 0.832237 | 1.059799e-55 | -8.615850e-47 |
| Msa1404410 | Msa1435260 | 0.805686 | 1.184409e-49 | -8.615850e-47 |
| Msa1409950 | Msa1435260 | 0.807594 | 4.684576e-50 | -8.615850e-47 |
| Msa1410690 | Msa1435260 | 0.801771 | 7.693225e-49 | -8.615850e-47 |
| Msa1411980 | Msa1435260 | 0.809060 | 2.280005e-50 | -8.615850e-47 |
| Msa1416260 | Msa1435260 | 0.806337 | 8.640393e-50 | -8.615850e-47 |
| Msa1418260 | Msa1435260 | 0.848033 | 7.932001e-60 | -8.615850e-47 |
| Msa1420250 | Msa1435260 | 0.877343 | 6.781121e-69 | -8.615850e-47 |
| Msa1426350 | Msa1435260 | 0.804094 | 2.547226e-49 | -8.615850e-47 |
| Msa1426910 | Msa1435260 | 0.941946 | 1.712328e-101 | -8.615850e-47 |
| Msa1431170 | Msa1435260 | 0.807886 | 4.059903e-50 | -8.615850e-47 |
| Msa1434040 | Msa1435260 | 0.833235 | 5.992166e-56 | -8.615850e-47 |
| Msa1435260 | Msa1438520 | 0.802676 | 5.010446e-49 | -8.615850e-47 |
| Msa1435260 | Msa1443310 | 0.820065 | 8.351951e-53 | -8.615850e-47 |
| Msa1435260 | Msa1446080 | 0.806005 | 1.014553e-49 | -8.615850e-47 |
| Msa1435260 | Msa1450720 | 0.837665 | 4.545686e-57 | -8.615850e-47 |
| Msa1435260 | Msa1454960 | 0.828048 | 1.116518e-54 | -8.615850e-47 |
| Msa1435260 | Msa1461710 | 0.813979 | 1.945622e-51 | -8.615850e-47 |
| Msa1435260 | Msa1463010 | 0.822069 | 2.885168e-53 | -8.615850e-47 |
| Msa1435260 | Msa1463030 | 0.813905 | 2.020316e-51 | -8.615850e-47 |
| Msa1435260 | Msa1464370 | 0.813795 | 2.135818e-51 | -8.615850e-47 |
| Msa1435260 | Msa1464550 | 0.808599 | 2.860979e-50 | -8.615850e-47 |
| Msa1435260 | Msa1466590 | 0.846162 | 2.583039e-59 | -8.615850e-47 |
| Msa1435260 | Msa1467000 | 0.847816 | 9.102512e-60 | -8.615850e-47 |
| Msa0606740 | Msa1435260 | 0.814157 | 1.777555e-51 | -8.615850e-47 |
| Msa0615030 | Msa1435260 | 0.830398 | 3.003584e-55 | -8.615850e-47 |
| Msa0618140 | Msa1435260 | 0.803249 | 3.814983e-49 | -8.615850e-47 |
| Msa0621240 | Msa1435260 | 0.803258 | 3.798535e-49 | -8.615850e-47 |
| Msa0621650 | Msa1435260 | 0.802813 | 4.695367e-49 | -8.615850e-47 |
| Msa0626270 | Msa1435260 | 0.805741 | 1.153095e-49 | -8.615850e-47 |
| Msa0628500 | Msa1435260 | 0.815014 | 1.148194e-51 | -8.615850e-47 |
| Msa0629430 | Msa1435260 | 0.808166 | 3.539356e-50 | -8.615850e-47 |
| Msa0640940 | Msa1435260 | 0.816474 | 5.428090e-52 | -8.615850e-47 |
| Msa0641730 | Msa1435260 | 0.803524 | 3.345817e-49 | -8.615850e-47 |
| Msa0651830 | Msa1435260 | 0.801764 | 7.720751e-49 | -8.615850e-47 |
| Msa0657750 | Msa1435260 | 0.811435 | 7.011460e-51 | -8.615850e-47 |
| Msa0663120 | Msa1435260 | 0.811184 | 7.949464e-51 | -8.615850e-47 |
| Msa0663250 | Msa1435260 | 0.800179 | 1.627541e-48 | -8.615850e-47 |
| Msa0664540 | Msa1435260 | 0.814330 | 1.627806e-51 | -8.615850e-47 |
| Msa0685750 | Msa1435260 | 0.813906 | 2.018763e-51 | -8.615850e-47 |
| Msa0687450 | Msa1435260 | 0.836936 | 6.986491e-57 | -8.615850e-47 |
| Msa0689420 | Msa1435260 | 0.804907 | 1.723837e-49 | -8.615850e-47 |
| Msa0689760 | Msa1435260 | 0.877582 | 5.596866e-69 | -8.615850e-47 |
| Msa0691340 | Msa1435260 | 0.855042 | 8.222814e-62 | -8.615850e-47 |
| Msa0698100 | Msa1435260 | 0.808832 | 2.551056e-50 | -8.615850e-47 |
| Msa0711130 | Msa1435260 | 0.812256 | 4.645424e-51 | -8.615850e-47 |
| Msa0712260 | Msa1435260 | 0.810127 | 1.345153e-50 | -8.615850e-47 |
| Msa0716860 | Msa1435260 | 0.867917 | 9.606397e-66 | -8.615850e-47 |
| Msa0730900 | Msa1435260 | 0.802801 | 4.720741e-49 | -8.615850e-47 |
| Msa0740640 | Msa1435260 | 0.818673 | 1.734167e-52 | -8.615850e-47 |
| Msa0743530 | Msa1435260 | 0.812489 | 4.131776e-51 | -8.615850e-47 |
| Msa0749400 | Msa1435260 | 0.829951 | 3.862244e-55 | -8.615850e-47 |
| Msa0750160 | Msa1435260 | 0.808155 | 3.557989e-50 | -8.615850e-47 |
| Msa0756380 | Msa1435260 | 0.815567 | 8.654741e-52 | -8.615850e-47 |
| Msa0757800 | Msa1435260 | 0.843950 | 1.021930e-58 | -8.615850e-47 |
| Msa0760770 | Msa1435260 | 0.837339 | 5.510916e-57 | -8.615850e-47 |
| Msa0763400 | Msa1435260 | 0.826028 | 3.396688e-54 | -8.615850e-47 |
| Msa0763890 | Msa1435260 | 0.813996 | 1.928797e-51 | -8.615850e-47 |
| Msa0763920 | Msa1435260 | 0.809818 | 1.567500e-50 | -8.615850e-47 |
| Msa0767100 | Msa1435260 | 0.832537 | 8.933626e-56 | -8.615850e-47 |
| Msa0780280 | Msa1435260 | 0.827423 | 1.577306e-54 | -8.615850e-47 |
| Msa0787150 | Msa1435260 | 0.808715 | 2.702394e-50 | -8.615850e-47 |
| Msa0789560 | Msa1435260 | 0.868013 | 8.950643e-66 | -8.615850e-47 |
| Msa0794740 | Msa1435260 | 0.805029 | 1.626064e-49 | -8.615850e-47 |
| Msa0796300 | Msa1435260 | 0.803359 | 3.620354e-49 | -8.615850e-47 |
| Msa0820200 | Msa1435260 | 0.817370 | 3.416709e-52 | -8.615850e-47 |
| Msa0820890 | Msa1435260 | 0.814406 | 1.565781e-51 | -8.615850e-47 |
| Msa0821800 | Msa1435260 | 0.807023 | 6.188465e-50 | -8.615850e-47 |
| Msa0828920 | Msa1435260 | 0.821722 | 3.470870e-53 | -8.615850e-47 |
| Msa0832090 | Msa1435260 | 0.810544 | 1.093262e-50 | -8.615850e-47 |
| Msa0832320 | Msa1435260 | 0.802243 | 6.152202e-49 | -8.615850e-47 |
| Msa0834750 | Msa1435260 | 0.830640 | 2.621051e-55 | -8.615850e-47 |
| Msa0123300 | Msa1435260 | 0.804917 | 1.716226e-49 | -8.615850e-47 |
| Msa0126230 | Msa1435260 | 0.857055 | 2.118101e-62 | -8.615850e-47 |
| Msa0126790 | Msa1435260 | 0.817824 | 2.699308e-52 | -8.615850e-47 |
| Msa0128180 | Msa1435260 | 0.801990 | 6.935806e-49 | -8.615850e-47 |
| Msa0131290 | Msa1435260 | 0.843700 | 1.192237e-58 | -8.615850e-47 |
| Msa0131700 | Msa1435260 | 0.837572 | 4.802941e-57 | -8.615850e-47 |
| Msa0133720 | Msa1435260 | 0.805915 | 1.059751e-49 | -8.615850e-47 |
| Msa0133820 | Msa1435260 | 0.820826 | 5.587244e-53 | -8.615850e-47 |
| Msa0138210 | Msa1435260 | 0.865614 | 5.195941e-65 | -8.615850e-47 |
| Msa0138500 | Msa1435260 | 0.805768 | 1.138126e-49 | -8.615850e-47 |
| Msa0138520 | Msa1435260 | 0.811153 | 8.070588e-51 | -8.615850e-47 |
| Msa0138950 | Msa1435260 | 0.854644 | 1.073115e-61 | -8.615850e-47 |
| Msa0140450 | Msa1435260 | 0.805686 | 1.184049e-49 | -8.615850e-47 |
| Msa0143850 | Msa1435260 | 0.833800 | 4.329752e-56 | -8.615850e-47 |
| Msa0144780 | Msa1435260 | 0.804136 | 2.496258e-49 | -8.615850e-47 |
| Msa0152400 | Msa1435260 | 0.814523 | 1.475683e-51 | -8.615850e-47 |
| Msa0171200 | Msa1435260 | 0.810026 | 1.414094e-50 | -8.615850e-47 |
| Msa0171870 | Msa1435260 | 0.812046 | 5.161362e-51 | -8.615850e-47 |
| Msa0174360 | Msa1435260 | 0.800558 | 1.362096e-48 | -8.615850e-47 |
| Msa0177170 | Msa1435260 | 0.855443 | 6.287782e-62 | -8.615850e-47 |
| Msa0183420 | Msa1435260 | 0.840300 | 9.445466e-58 | -8.615850e-47 |
| Msa0189110 | Msa1435260 | 0.814985 | 1.165314e-51 | -8.615850e-47 |
| Msa0196160 | Msa1435260 | 0.826883 | 2.124499e-54 | -8.615850e-47 |
| Msa0198300 | Msa1435260 | 0.830870 | 2.302247e-55 | -8.615850e-47 |
| Msa0200560 | Msa1435260 | 0.801168 | 1.022654e-48 | -8.615850e-47 |
| Msa0202730 | Msa1435260 | 0.818660 | 1.745489e-52 | -8.615850e-47 |
| Msa0205340 | Msa1435260 | 0.804364 | 2.238494e-49 | -8.615850e-47 |
| Msa0210260 | Msa1435260 | 0.804975 | 1.668519e-49 | -8.615850e-47 |
| Msa0212930 | Msa1435260 | 0.804148 | 2.481989e-49 | -8.615850e-47 |
| Msa0218350 | Msa1435260 | 0.800313 | 1.527951e-48 | -8.615850e-47 |
| Msa0220730 | Msa1435260 | 0.819244 | 1.286094e-52 | -8.615850e-47 |
| Msa0222550 | Msa1435260 | 0.828172 | 1.042156e-54 | -8.615850e-47 |
| Msa0227230 | Msa1435260 | 0.813458 | 2.533395e-51 | -8.615850e-47 |
| Msa0231190 | Msa1435260 | 0.806307 | 8.765377e-50 | -8.615850e-47 |
| Msa0231240 | Msa1435260 | 0.826044 | 3.366388e-54 | -8.615850e-47 |
| Msa0232340 | Msa1435260 | 0.832557 | 8.830425e-56 | -8.615850e-47 |
| Msa0236770 | Msa1435260 | 0.871003 | 9.513761e-67 | -8.615850e-47 |
| Msa0237200 | Msa1435260 | 0.802907 | 4.489095e-49 | -8.615850e-47 |
| Msa0237310 | Msa1435260 | 0.823647 | 1.237407e-53 | -8.615850e-47 |
| Msa1224830 | Msa1435260 | 0.801634 | 8.208741e-49 | -8.615850e-47 |
| Msa1225800 | Msa1435260 | 0.839581 | 1.454298e-57 | -8.615850e-47 |
| Msa1250530 | Msa1435260 | 0.816798 | 4.591607e-52 | -8.615850e-47 |
| Msa1253450 | Msa1435260 | 0.812346 | 4.439950e-51 | -8.615850e-47 |
| Msa1254620 | Msa1435260 | 0.863028 | 3.333908e-64 | -8.615850e-47 |
| Msa1259640 | Msa1435260 | 0.853736 | 1.961462e-61 | -8.615850e-47 |
| Msa1263060 | Msa1435260 | 0.803744 | 3.011825e-49 | -8.615850e-47 |
| Msa1265720 | Msa1435260 | 0.818100 | 2.337710e-52 | -8.615850e-47 |
| Msa1289000 | Msa1435260 | 0.800330 | 1.515821e-48 | -8.615850e-47 |
| Msa1297530 | Msa1435260 | 0.851002 | 1.178274e-60 | -8.615850e-47 |
| Msa1299330 | Msa1435260 | 0.831370 | 1.734523e-55 | -8.615850e-47 |
| Msa1304810 | Msa1435260 | 0.808432 | 3.105534e-50 | -8.615850e-47 |
| Msa1320820 | Msa1435260 | 0.804296 | 2.312022e-49 | -8.615850e-47 |
| Msa1329550 | Msa1435260 | 0.816259 | 6.065049e-52 | -8.615850e-47 |
| Msa1329790 | Msa1435260 | 0.852471 | 4.516670e-61 | -8.615850e-47 |
| Msa1333420 | Msa1435260 | 0.808368 | 3.206141e-50 | -8.615850e-47 |
| Msa1333730 | Msa1435260 | 0.837292 | 5.666322e-57 | -8.615850e-47 |
| Msa1336040 | Msa1435260 | 0.833847 | 4.215123e-56 | -8.615850e-47 |
| Msa1338250 | Msa1435260 | 0.830120 | 3.511143e-55 | -8.615850e-47 |
| Msa1342620 | Msa1435260 | 0.808522 | 2.972027e-50 | -8.615850e-47 |
| Msa1344310 | Msa1435260 | 0.805873 | 1.081964e-49 | -8.615850e-47 |
| Msa0367740 | Msa1435260 | 0.807090 | 5.988561e-50 | -8.615850e-47 |
| Msa0376020 | Msa1435260 | 0.801854 | 7.396764e-49 | -8.615850e-47 |
| Msa0377440 | Msa1435260 | 0.818703 | 1.707094e-52 | -8.615850e-47 |
| Msa0379610 | Msa1435260 | 0.824531 | 7.672945e-54 | -8.615850e-47 |
| Msa0382370 | Msa1435260 | 0.801586 | 8.396368e-49 | -8.615850e-47 |
| Msa0383950 | Msa1435260 | 0.807970 | 3.897206e-50 | -8.615850e-47 |
| Msa0387250 | Msa1435260 | 0.820523 | 6.557509e-53 | -8.615850e-47 |
| Msa0387950 | Msa1435260 | 0.822293 | 2.559878e-53 | -8.615850e-47 |
| Msa0390960 | Msa1435260 | 0.835944 | 1.249287e-56 | -8.615850e-47 |
| Msa0395980 | Msa1435260 | 0.871596 | 6.058042e-67 | -8.615850e-47 |
| Msa0410840 | Msa1435260 | 0.800361 | 1.494051e-48 | -8.615850e-47 |
| Msa0410870 | Msa1435260 | 0.804433 | 2.165313e-49 | -8.615850e-47 |
| Msa0417650 | Msa1435260 | 0.820205 | 7.754804e-53 | -8.615850e-47 |
| Msa0417730 | Msa1435260 | 0.810887 | 9.217268e-51 | -8.615850e-47 |
| Msa0423840 | Msa1435260 | 0.876247 | 1.624692e-68 | -8.615850e-47 |
| Msa0430870 | Msa1435260 | 0.809545 | 1.794525e-50 | -8.615850e-47 |
| Msa0431410 | Msa1435260 | 0.814211 | 1.728818e-51 | -8.615850e-47 |
| Msa0433610 | Msa1435260 | 0.812977 | 3.231866e-51 | -8.615850e-47 |
| Msa0439970 | Msa1435260 | 0.821879 | 3.192685e-53 | -8.615850e-47 |
| Msa0440510 | Msa1435260 | 0.844996 | 5.346436e-59 | -8.615850e-47 |
| Msa0446900 | Msa1435260 | 0.817640 | 2.969093e-52 | -8.615850e-47 |
| Msa0450360 | Msa1435260 | 0.819299 | 1.249084e-52 | -8.615850e-47 |
| Msa0468250 | Msa1435260 | 0.816721 | 4.778998e-52 | -8.615850e-47 |
| Msa0473980 | Msa1435260 | 0.846315 | 2.346276e-59 | -8.615850e-47 |
| Msa0476680 | Msa1435260 | 0.800656 | 1.301082e-48 | -8.615850e-47 |
| Msa0981310 | Msa1435260 | 0.838804 | 2.312841e-57 | -8.615850e-47 |
| Msa0983770 | Msa1435260 | 0.845496 | 3.915903e-59 | -8.615850e-47 |
| Msa0986510 | Msa1435260 | 0.821316 | 4.308256e-53 | -8.615850e-47 |
| Msa0996020 | Msa1435260 | 0.837947 | 3.848570e-57 | -8.615850e-47 |
| Msa0998590 | Msa1435260 | 0.817987 | 2.479786e-52 | -8.615850e-47 |
| Msa1010070 | Msa1435260 | 0.831255 | 1.851134e-55 | -8.615850e-47 |
| Msa1020940 | Msa1435260 | 0.855365 | 6.624328e-62 | -8.615850e-47 |
| Msa1036740 | Msa1435260 | 0.829556 | 4.818462e-55 | -8.615850e-47 |
| Msa1040980 | Msa1435260 | 0.806831 | 6.795694e-50 | -8.615850e-47 |
| Msa1072600 | Msa1435260 | 0.841902 | 3.585059e-58 | -8.615850e-47 |
| Msa1072700 | Msa1435260 | 0.802262 | 6.097362e-49 | -8.615850e-47 |
| Msa1072970 | Msa1435260 | 0.801990 | 6.935806e-49 | -8.615850e-47 |
| Msa1077070 | Msa1435260 | 0.834480 | 2.925459e-56 | -8.615850e-47 |
| Msa1079860 | Msa1435260 | 0.800243 | 1.579298e-48 | -8.615850e-47 |
| Msa1095790 | Msa1435260 | 0.885127 | 1.062568e-71 | -8.615850e-47 |
| Msa1098890 | Msa1435260 | 0.816216 | 6.199780e-52 | -8.615850e-47 |
| Msa0240650 | Msa1435260 | 0.844263 | 8.425993e-59 | -8.615850e-47 |
| Msa0241350 | Msa1435260 | 0.840168 | 1.023113e-57 | -8.615850e-47 |
| Msa0244970 | Msa1435260 | 0.814680 | 1.361897e-51 | -8.615850e-47 |
| Msa0245940 | Msa1435260 | 0.801830 | 7.480932e-49 | -8.615850e-47 |
| Msa0249100 | Msa1435260 | 0.852697 | 3.895418e-61 | -8.615850e-47 |
| Msa0249310 | Msa1435260 | 0.813117 | 3.010637e-51 | -8.615850e-47 |
| Msa0251270 | Msa1435260 | 0.829807 | 4.185701e-55 | -8.615850e-47 |
| Msa0253200 | Msa1435260 | 0.816744 | 4.723383e-52 | -8.615850e-47 |
| Msa0264840 | Msa1435260 | 0.807002 | 6.251438e-50 | -8.615850e-47 |
| Msa0269520 | Msa1435260 | 0.838910 | 2.171586e-57 | -8.615850e-47 |
| Msa0271790 | Msa1435260 | 0.835309 | 1.809160e-56 | -8.615850e-47 |
| Msa0274730 | Msa1435260 | 0.819718 | 1.002263e-52 | -8.615850e-47 |
| Msa0279390 | Msa1435260 | 0.877985 | 4.047242e-69 | -8.615850e-47 |
| Msa0280150 | Msa1435260 | 0.833471 | 5.232594e-56 | -8.615850e-47 |
| Msa0281360 | Msa1435260 | 0.855178 | 7.507338e-62 | -8.615850e-47 |
| Msa0287790 | Msa1435260 | 0.826351 | 2.844785e-54 | -8.615850e-47 |
| Msa0292030 | Msa1435260 | 0.813577 | 2.385984e-51 | -8.615850e-47 |
| Msa0301810 | Msa1435260 | 0.849195 | 3.779336e-60 | -8.615850e-47 |
| Msa0302890 | Msa1435260 | 0.879180 | 1.538013e-69 | -8.615850e-47 |
| Msa0304100 | Msa1435260 | 0.825601 | 4.289320e-54 | -8.615850e-47 |
| Msa0304840 | Msa1435260 | 0.808014 | 3.813931e-50 | -8.615850e-47 |
| Msa0305330 | Msa1435260 | 0.842198 | 2.992750e-58 | -8.615850e-47 |
| Msa0307860 | Msa1435260 | 0.827152 | 1.832078e-54 | -8.615850e-47 |
| Msa0310430 | Msa1435260 | 0.820035 | 8.486061e-53 | -8.615850e-47 |
| Msa0315530 | Msa1435260 | 0.806956 | 6.394960e-50 | -8.615850e-47 |
| Msa0318880 | Msa1435260 | 0.897904 | 8.942234e-77 | -8.615850e-47 |
| Msa0320800 | Msa1435260 | 0.819334 | 1.226759e-52 | -8.615850e-47 |
| Msa0321130 | Msa1435260 | 0.801317 | 9.534561e-49 | -8.615850e-47 |
| Msa0323370 | Msa1435260 | 0.818530 | 1.868715e-52 | -8.615850e-47 |
| Msa0341230 | Msa1435260 | 0.809282 | 2.043789e-50 | -8.615850e-47 |
| Msa0347950 | Msa1435260 | 0.827680 | 1.368527e-54 | -8.615850e-47 |
| Msa0347990 | Msa1435260 | 0.838321 | 3.082094e-57 | -8.615850e-47 |
| Msa0348530 | Msa1435260 | 0.803088 | 4.119844e-49 | -8.615850e-47 |
| Msa0358400 | Msa1435260 | 0.836392 | 9.611016e-57 | -8.615850e-47 |
| Msa0362890 | Msa1435260 | 0.857599 | 1.463073e-62 | -8.615850e-47 |
| Msa0363400 | Msa1435260 | 0.832335 | 1.002451e-55 | -8.615850e-47 |
| Msa1122780 | Msa1435260 | 0.837752 | 4.318107e-57 | -8.615850e-47 |
| Msa1127430 | Msa1435260 | 0.860760 | 1.649349e-63 | -8.615850e-47 |
| Msa1143710 | Msa1435260 | 0.800881 | 1.170288e-48 | -8.615850e-47 |
| Msa1152950 | Msa1435260 | 0.818787 | 1.633426e-52 | -8.615850e-47 |
| Msa1163870 | Msa1435260 | 0.813370 | 2.648981e-51 | -8.615850e-47 |
| Msa1168340 | Msa1435260 | 0.806026 | 1.004698e-49 | -8.615850e-47 |
| Msa1168550 | Msa1435260 | 0.822609 | 2.161749e-53 | -8.615850e-47 |
| Msa1168590 | Msa1435260 | 0.820072 | 8.318752e-53 | -8.615850e-47 |
| Msa1188710 | Msa1435260 | 0.810332 | 1.214797e-50 | -8.615850e-47 |
| Msa1201640 | Msa1435260 | 0.848829 | 4.776134e-60 | -8.615850e-47 |
| Msa1205480 | Msa1435260 | 0.857234 | 1.875456e-62 | -8.615850e-47 |
| Msa1205590 | Msa1435260 | 0.854570 | 1.127618e-61 | -8.615850e-47 |
| Msa1206100 | Msa1435260 | 0.814578 | 1.434598e-51 | -8.615850e-47 |
| Msa1211340 | Msa1435260 | 0.855885 | 4.671686e-62 | -8.615850e-47 |
| Msa1214320 | Msa1435260 | 0.800947 | 1.134789e-48 | -8.615850e-47 |
| Msa1215070 | Msa1435260 | 0.850957 | 1.213521e-60 | -8.615850e-47 |
| Msa1217670 | Msa1435260 | 0.854396 | 1.265491e-61 | -8.615850e-47 |
| Msa1220870 | Msa1435260 | 0.804056 | 2.594508e-49 | -8.615850e-47 |
| Msa0483740 | Msa1435260 | 0.831579 | 1.540979e-55 | -8.615850e-47 |
| Msa0491000 | Msa1435260 | 0.845671 | 3.510508e-59 | -8.615850e-47 |
| Msa0510290 | Msa1435260 | 0.825771 | 3.909019e-54 | -8.615850e-47 |
| Msa0516020 | Msa1435260 | 0.802043 | 6.766329e-49 | -8.615850e-47 |
| Msa0517650 | Msa1435260 | 0.827613 | 1.420479e-54 | -8.615850e-47 |
| Msa0518960 | Msa1435260 | 0.819955 | 8.848001e-53 | -8.615850e-47 |
| Msa0542860 | Msa1435260 | 0.805541 | 1.270147e-49 | -8.615850e-47 |
| Msa0547680 | Msa1435260 | 0.812725 | 3.668496e-51 | -8.615850e-47 |
| Msa0555320 | Msa1435260 | 0.803017 | 4.261015e-49 | -8.615850e-47 |
| Msa0566750 | Msa1435260 | 0.801541 | 8.575475e-49 | -8.615850e-47 |
| Msa0576680 | Msa1435260 | 0.802920 | 4.462278e-49 | -8.615850e-47 |
| Msa0588120 | Msa1435260 | 0.803084 | 4.126484e-49 | -8.615850e-47 |
| Msa0594200 | Msa1435260 | 0.829115 | 6.166669e-55 | -8.615850e-47 |
| Msa0597770 | Msa1435260 | 0.800887 | 1.167080e-48 | -8.615850e-47 |
| Msa0861830 | Msa1435260 | 0.801501 | 8.740156e-49 | -8.615850e-47 |
| Msa0868440 | Msa1435260 | 0.809278 | 2.047606e-50 | -8.615850e-47 |
| Msa0898660 | Msa1435260 | 0.809245 | 2.080976e-50 | -8.615850e-47 |
| Msa0926670 | Msa1435260 | 0.811020 | 8.624256e-51 | -8.615850e-47 |
| Msa0932350 | Msa1435260 | 0.809827 | 1.561157e-50 | -8.615850e-47 |
| Msa0933450 | Msa1435260 | 0.837023 | 6.636524e-57 | -8.615850e-47 |
| Msa0937430 | Msa1435260 | 0.820336 | 7.237854e-53 | -8.615850e-47 |
| Msa0958030 | Msa1435260 | 0.818333 | 2.070444e-52 | -8.615850e-47 |
| Msa0969330 | Msa1435260 | 0.836742 | 7.829806e-57 | -8.615850e-47 |
| Msa0973280 | Msa1435260 | 0.805007 | 1.642869e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435260 | MtrunA17_Chr4g0054731 | 97.561 | 246 | 2 | 2 | 1 | 244 | 62 | 305 | 4.48e-177 | 504 |
| Msa1435260 | MtrunA17_Chr2g0286891 | 40.000 | 195 | 86 | 6 | 16 | 201 | 118 | 290 | 1.10e-32 | 125 |
| Msa1435260 | MtrunA17_Chr1g0196471 | 32.934 | 167 | 72 | 5 | 10 | 158 | 53 | 197 | 1.60e-15 | 75.5 |
| Msa1435260 | MtrunA17_Chr4g0064071 | 48.718 | 78 | 32 | 2 | 108 | 177 | 1 | 78 | 7.43e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435260 | AT2G35330.1 | 57.661 | 248 | 73 | 7 | 5 | 243 | 84 | 308 | 1.82e-78 | 251 |
| Msa1435260 | AT2G35330.2 | 57.143 | 252 | 76 | 7 | 1 | 243 | 53 | 281 | 2.35e-77 | 247 |
| Msa1435260 | AT1G32530.1 | 52.033 | 246 | 97 | 4 | 2 | 243 | 55 | 283 | 8.55e-64 | 211 |
| Msa1435260 | AT4G03000.4 | 36.242 | 149 | 75 | 2 | 11 | 159 | 81 | 209 | 7.73e-19 | 85.5 |
| Msa1435260 | AT4G03000.6 | 36.242 | 149 | 75 | 2 | 11 | 159 | 81 | 209 | 7.73e-19 | 85.5 |
| Msa1435260 | AT4G03000.3 | 35.294 | 153 | 79 | 2 | 11 | 163 | 81 | 213 | 8.14e-19 | 85.5 |
| Msa1435260 | AT4G03000.5 | 36.242 | 149 | 75 | 2 | 11 | 159 | 81 | 209 | 8.76e-19 | 85.5 |
| Msa1435260 | AT4G03000.1 | 35.294 | 153 | 79 | 2 | 11 | 163 | 81 | 213 | 4.04e-18 | 83.6 |
| Msa1435260 | AT4G03000.2 | 35.294 | 153 | 79 | 2 | 11 | 163 | 81 | 213 | 4.04e-18 | 83.6 |
| Msa1435260 | AT1G03365.1 | 34.884 | 129 | 64 | 2 | 35 | 163 | 108 | 216 | 5.97e-14 | 71.2 |
| Msa1435260 | AT1G03365.2 | 34.884 | 129 | 64 | 2 | 35 | 163 | 108 | 216 | 5.97e-14 | 71.2 |
Find 84 sgRNAs with CRISPR-Local
Find 94 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACCAGGTTCATCAGAATT+AGG | 0.165784 | tig0027682:-53333 | None:intergenic |
| TTTCATGAGGGGTGGGGATT+TGG | 0.196073 | tig0027682:+53918 | Msa1435260:CDS |
| TATGTTGGTGTTGGTGTTAA+TGG | 0.237164 | tig0027682:+53570 | Msa1435260:CDS |
| TAGGGTTTGGATTGGGAATA+GGG | 0.243797 | tig0027682:-53314 | None:intergenic |
| CCACCCCTCATGAAACTTAC+AGG | 0.278418 | tig0027682:-53910 | None:intergenic |
| TTAGGGTTTGGATTGGGAAT+AGG | 0.289527 | tig0027682:-53315 | None:intergenic |
| TTGAGGAATGGGCATTGTTA+TGG | 0.316950 | tig0027682:+53480 | Msa1435260:CDS |
| AACCAGGTTCATCAGAATTA+GGG | 0.322926 | tig0027682:-53332 | None:intergenic |
| AGGGGTGGGGATTTGGAAAT+GGG | 0.324779 | tig0027682:+53925 | Msa1435260:CDS |
| TGTTTCGAAGATTGTTGCTT+TGG | 0.325390 | tig0027682:+53425 | Msa1435260:CDS |
| GCATTTGGAGGAGTATTCTT+TGG | 0.331101 | tig0027682:+53665 | Msa1435260:CDS |
| TTTCGCTGATTTGAAGCATT+TGG | 0.335418 | tig0027682:+53650 | Msa1435260:CDS |
| GGAGCTGCTGTTGTTGAATC+TGG | 0.341405 | tig0027682:+53834 | Msa1435260:CDS |
| GAGGGGTGGGGATTTGGAAA+TGG | 0.347011 | tig0027682:+53924 | Msa1435260:CDS |
| GCATCACCTTTACTCAAATT+CGG | 0.355254 | tig0027682:-53720 | None:intergenic |
| TTGGAGGAGTATTCTTTGGC+TGG | 0.358204 | tig0027682:+53669 | Msa1435260:CDS |
| TAATTCTGATGAACCTGGTT+GGG | 0.358852 | tig0027682:+53335 | Msa1435260:CDS |
| TGCTCGTGAGGGTGAGAATA+TGG | 0.360974 | tig0027682:+53611 | Msa1435260:CDS |
| GGTTCATCAGAATTAGGGTT+TGG | 0.391570 | tig0027682:-53327 | None:intergenic |
| TCAATCTCCCTCTGCAAAAC+CGG | 0.392850 | tig0027682:-53987 | None:intergenic |
| GTTTCGAAGATTGTTGCTTT+GGG | 0.398776 | tig0027682:+53426 | Msa1435260:CDS |
| GAGAAAGATCAAACCTCTTC+GGG | 0.407254 | tig0027682:-54013 | None:intergenic |
| CTACTGCACTGAGGAGCAAT+TGG | 0.419591 | tig0027682:+53359 | Msa1435260:CDS |
| GATTACCCCACGAATGCAAA+TGG | 0.426274 | tig0027682:+53948 | Msa1435260:CDS |
| GTTAATGGTGCTGTTTGTGC+TGG | 0.435518 | tig0027682:+53585 | Msa1435260:CDS |
| CAATATCCCATTTGCATTCG+TGG | 0.442568 | tig0027682:-53955 | None:intergenic |
| GGAGAAAGATCAAACCTCTT+CGG | 0.445672 | tig0027682:-54014 | None:intergenic |
| GGAGTATTCTTTGGCTGGGA+TGG | 0.447957 | tig0027682:+53674 | Msa1435260:CDS |
| CGCTGATTTGAAGCATTTGG+AGG | 0.451062 | tig0027682:+53653 | Msa1435260:CDS |
| TCAGAATTAGGGTTTGGATT+GGG | 0.457934 | tig0027682:-53321 | None:intergenic |
| GTTGAATCTGGTGGTGGTGG+TGG | 0.462730 | tig0027682:+53846 | Msa1435260:CDS |
| GTACTAAACCGGTTGCTCAT+AGG | 0.464174 | tig0027682:+53877 | Msa1435260:CDS |
| TGCTTCAAATCAGCGAAAAC+CGG | 0.464549 | tig0027682:-53645 | None:intergenic |
| ATCAGAATTAGGGTTTGGAT+TGG | 0.465804 | tig0027682:-53322 | None:intergenic |
| AGGAATGGGCATTGTTATGG+TGG | 0.467079 | tig0027682:+53483 | Msa1435260:CDS |
| GATGGTGTGTTTGTTGCAAC+AGG | 0.467679 | tig0027682:+53692 | Msa1435260:CDS |
| ACTATAGAGATTCCTGTGCC+TGG | 0.471233 | tig0027682:+53789 | Msa1435260:CDS |
| GGAGTGCGAGTGCGGGTGCG+AGG | 0.480751 | tig0027682:+53811 | Msa1435260:CDS |
| GAGTGCGAGTGCGGGTGCGA+GGG | 0.482418 | tig0027682:+53812 | Msa1435260:CDS |
| AATATCCCATTTGCATTCGT+GGG | 0.483953 | tig0027682:-53954 | None:intergenic |
| TGTGTTTGTTGCAACAGGTT+AGG | 0.484982 | tig0027682:+53697 | Msa1435260:CDS |
| TGGGATATTGTCTTGTGCTC+CGG | 0.488650 | tig0027682:+53968 | Msa1435260:CDS |
| GGAAAAGACCTATGAGCAAC+CGG | 0.500424 | tig0027682:-53885 | None:intergenic |
| GAATATGGATGAGCTTGAAC+CGG | 0.501233 | tig0027682:+53626 | Msa1435260:CDS |
| TGGAGGAGTATTCTTTGGCT+GGG | 0.506088 | tig0027682:+53670 | Msa1435260:CDS |
| AATTCTGATGAACCTGGTTG+GGG | 0.509977 | tig0027682:+53336 | Msa1435260:CDS |
| AGTAATAATGGTGCTTATGT+TGG | 0.514987 | tig0027682:+53555 | Msa1435260:CDS |
| CCACCCTGTAAGTTTCATGA+GGG | 0.516547 | tig0027682:+53906 | Msa1435260:CDS |
| GTGCCTGGGAGTGCGAGTGC+GGG | 0.517029 | tig0027682:+53804 | Msa1435260:CDS |
| CTGTAAGTTTCATGAGGGGT+GGG | 0.524003 | tig0027682:+53911 | Msa1435260:CDS |
| TCCACCCTGTAAGTTTCATG+AGG | 0.526508 | tig0027682:+53905 | Msa1435260:CDS |
| GGGGTGGGGATTTGGAAATG+GGG | 0.527002 | tig0027682:+53926 | Msa1435260:CDS |
| AATGGTGCTTATGTTGGTGT+TGG | 0.527750 | tig0027682:+53561 | Msa1435260:CDS |
| TGGTAAGGCTCGTACTAAAC+CGG | 0.530336 | tig0027682:+53866 | Msa1435260:CDS |
| AGTGCGAGTGCGGGTGCGAG+GGG | 0.535788 | tig0027682:+53813 | Msa1435260:CDS |
| TGGGCATTGTTATGGTGGGA+TGG | 0.538707 | tig0027682:+53488 | Msa1435260:CDS |
| CTGCACTGAGGAGCAATTGG+AGG | 0.540784 | tig0027682:+53362 | Msa1435260:CDS |
| TTTGGGTTATGATGAAGATA+CGG | 0.544122 | tig0027682:+53443 | Msa1435260:CDS |
| GCTGTTGTTGAATCTGGTGG+TGG | 0.548584 | tig0027682:+53840 | Msa1435260:CDS |
| TGTGCCTGGGAGTGCGAGTG+CGG | 0.548643 | tig0027682:+53803 | Msa1435260:CDS |
| GTTAGGCCGAATTTGAGTAA+AGG | 0.551522 | tig0027682:+53714 | Msa1435260:CDS |
| TGTAAGTTTCATGAGGGGTG+GGG | 0.551649 | tig0027682:+53912 | Msa1435260:CDS |
| GTTGTTGAATCTGGTGGTGG+TGG | 0.554384 | tig0027682:+53843 | Msa1435260:CDS |
| TAATGAGTGATCTTCATGTT+GGG | 0.554772 | tig0027682:+53757 | Msa1435260:CDS |
| ATTACCCCACGAATGCAAAT+GGG | 0.556457 | tig0027682:+53949 | Msa1435260:CDS |
| CTATAGAGATTCCTGTGCCT+GGG | 0.558646 | tig0027682:+53790 | Msa1435260:CDS |
| CTAATGAGTGATCTTCATGT+TGG | 0.560824 | tig0027682:+53756 | Msa1435260:CDS |
| CCTGTAAGTTTCATGAGGGG+TGG | 0.564269 | tig0027682:+53910 | Msa1435260:CDS |
| CACCCTGTAAGTTTCATGAG+GGG | 0.565523 | tig0027682:+53907 | Msa1435260:CDS |
| GGAATGGGCATTGTTATGGT+GGG | 0.568206 | tig0027682:+53484 | Msa1435260:CDS |
| TGAAGATACGGCGTTGAAAG+CGG | 0.573429 | tig0027682:+53455 | Msa1435260:CDS |
| GCACTCGCACTCCCAGGCAC+AGG | 0.573638 | tig0027682:-53801 | None:intergenic |
| CTAATTCTGATGAACCTGGT+TGG | 0.578658 | tig0027682:+53334 | Msa1435260:CDS |
| GCTGCTGTTGTTGAATCTGG+TGG | 0.582460 | tig0027682:+53837 | Msa1435260:CDS |
| CACCCCTCATGAAACTTACA+GGG | 0.584927 | tig0027682:-53909 | None:intergenic |
| GCACCCGCACTCGCACTCCC+AGG | 0.592742 | tig0027682:-53807 | None:intergenic |
| TCAGTGCAGTAGCCCCAACC+AGG | 0.599669 | tig0027682:-53348 | None:intergenic |
| AACCCTAATTCTGATGAACC+TGG | 0.627095 | tig0027682:+53330 | Msa1435260:CDS |
| ATATCCCATTTGCATTCGTG+GGG | 0.649876 | tig0027682:-53953 | None:intergenic |
| GGGAGATTGAATTCCCGAAG+AGG | 0.662042 | tig0027682:+54000 | Msa1435260:CDS |
| CCCTCATGAAACTTACAGGG+TGG | 0.674174 | tig0027682:-53906 | None:intergenic |
| CTTCAACAAGCACTTCATGG+CGG | 0.696199 | tig0027682:-54035 | None:intergenic |
| TGAGTAAAGGTGATGCAATG+TGG | 0.707299 | tig0027682:+53727 | Msa1435260:CDS |
| TGGTTGGGGCTACTGCACTG+AGG | 0.758065 | tig0027682:+53350 | Msa1435260:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAATATTTTGCATAATTCGT+TGG | + | tig0027682:53521-53540 | Msa1435260:CDS | 25.0% |
| !! | GCGTTTTTGAATAGTAATAA+TGG | + | tig0027682:53543-53562 | Msa1435260:CDS | 25.0% |
| ! | GGAGATTTTGTTGAAGAATT+TGG | + | tig0027682:53383-53402 | Msa1435260:CDS | 30.0% |
| ! | TTTGGGTTATGATGAAGATA+CGG | + | tig0027682:53443-53462 | Msa1435260:CDS | 30.0% |
| AGTAATAATGGTGCTTATGT+TGG | + | tig0027682:53555-53574 | Msa1435260:CDS | 30.0% | |
| TAATGAGTGATCTTCATGTT+GGG | + | tig0027682:53757-53776 | Msa1435260:CDS | 30.0% | |
| TCAGAATTAGGGTTTGGATT+GGG | - | tig0027682:53324-53343 | None:intergenic | 35.0% | |
| ATCAGAATTAGGGTTTGGAT+TGG | - | tig0027682:53325-53344 | None:intergenic | 35.0% | |
| AACCAGGTTCATCAGAATTA+GGG | - | tig0027682:53335-53354 | None:intergenic | 35.0% | |
| TAATTCTGATGAACCTGGTT+GGG | + | tig0027682:53335-53354 | Msa1435260:CDS | 35.0% | |
| ! | TGTTTCGAAGATTGTTGCTT+TGG | + | tig0027682:53425-53444 | Msa1435260:CDS | 35.0% |
| !! | GTTTCGAAGATTGTTGCTTT+GGG | + | tig0027682:53426-53445 | Msa1435260:CDS | 35.0% |
| !! | TATGTTGGTGTTGGTGTTAA+TGG | + | tig0027682:53570-53589 | Msa1435260:CDS | 35.0% |
| !! | TTTCGCTGATTTGAAGCATT+TGG | + | tig0027682:53650-53669 | Msa1435260:CDS | 35.0% |
| GCATCACCTTTACTCAAATT+CGG | - | tig0027682:53723-53742 | None:intergenic | 35.0% | |
| CTAATGAGTGATCTTCATGT+TGG | + | tig0027682:53756-53775 | Msa1435260:CDS | 35.0% | |
| AATATCCCATTTGCATTCGT+GGG | - | tig0027682:53957-53976 | None:intergenic | 35.0% | |
| ! | TAGGGTTTGGATTGGGAATA+GGG | - | tig0027682:53317-53336 | None:intergenic | 40.0% |
| ! | TTAGGGTTTGGATTGGGAAT+AGG | - | tig0027682:53318-53337 | None:intergenic | 40.0% |
| GGTTCATCAGAATTAGGGTT+TGG | - | tig0027682:53330-53349 | None:intergenic | 40.0% | |
| AACCCTAATTCTGATGAACC+TGG | + | tig0027682:53330-53349 | Msa1435260:CDS | 40.0% | |
| CAACCAGGTTCATCAGAATT+AGG | - | tig0027682:53336-53355 | None:intergenic | 40.0% | |
| CTAATTCTGATGAACCTGGT+TGG | + | tig0027682:53334-53353 | Msa1435260:CDS | 40.0% | |
| AATTCTGATGAACCTGGTTG+GGG | + | tig0027682:53336-53355 | Msa1435260:CDS | 40.0% | |
| !!! | TTGAAAGCGGTTTTGAGGAA+TGG | + | tig0027682:53468-53487 | Msa1435260:CDS | 40.0% |
| !!! | TGAAAGCGGTTTTGAGGAAT+GGG | + | tig0027682:53469-53488 | Msa1435260:CDS | 40.0% |
| ! | TTGAGGAATGGGCATTGTTA+TGG | + | tig0027682:53480-53499 | Msa1435260:CDS | 40.0% |
| AATGGTGCTTATGTTGGTGT+TGG | + | tig0027682:53561-53580 | Msa1435260:CDS | 40.0% | |
| GAATATGGATGAGCTTGAAC+CGG | + | tig0027682:53626-53645 | Msa1435260:CDS | 40.0% | |
| TGCTTCAAATCAGCGAAAAC+CGG | - | tig0027682:53648-53667 | None:intergenic | 40.0% | |
| !! | GCATTTGGAGGAGTATTCTT+TGG | + | tig0027682:53665-53684 | Msa1435260:CDS | 40.0% |
| ! | TGTGTTTGTTGCAACAGGTT+AGG | + | tig0027682:53697-53716 | Msa1435260:CDS | 40.0% |
| GTTAGGCCGAATTTGAGTAA+AGG | + | tig0027682:53714-53733 | Msa1435260:CDS | 40.0% | |
| TGAGTAAAGGTGATGCAATG+TGG | + | tig0027682:53727-53746 | Msa1435260:CDS | 40.0% | |
| ATTACCCCACGAATGCAAAT+GGG | + | tig0027682:53949-53968 | Msa1435260:CDS | 40.0% | |
| ATATCCCATTTGCATTCGTG+GGG | - | tig0027682:53956-53975 | None:intergenic | 40.0% | |
| CAATATCCCATTTGCATTCG+TGG | - | tig0027682:53958-53977 | None:intergenic | 40.0% | |
| GAGAAAGATCAAACCTCTTC+GGG | - | tig0027682:54016-54035 | None:intergenic | 40.0% | |
| GGAGAAAGATCAAACCTCTT+CGG | - | tig0027682:54017-54036 | None:intergenic | 40.0% | |
| ! | TGAAGATACGGCGTTGAAAG+CGG | + | tig0027682:53455-53474 | Msa1435260:CDS | 45.0% |
| ! | AGGAATGGGCATTGTTATGG+TGG | + | tig0027682:53483-53502 | Msa1435260:CDS | 45.0% |
| ! | GGAATGGGCATTGTTATGGT+GGG | + | tig0027682:53484-53503 | Msa1435260:CDS | 45.0% |
| !! | GTTAATGGTGCTGTTTGTGC+TGG | + | tig0027682:53585-53604 | Msa1435260:CDS | 45.0% |
| !! | CGCTGATTTGAAGCATTTGG+AGG | + | tig0027682:53653-53672 | Msa1435260:CDS | 45.0% |
| !! | TTGGAGGAGTATTCTTTGGC+TGG | + | tig0027682:53669-53688 | Msa1435260:CDS | 45.0% |
| !! | TGGAGGAGTATTCTTTGGCT+GGG | + | tig0027682:53670-53689 | Msa1435260:CDS | 45.0% |
| ! | GATGGTGTGTTTGTTGCAAC+AGG | + | tig0027682:53692-53711 | Msa1435260:CDS | 45.0% |
| ACTATAGAGATTCCTGTGCC+TGG | + | tig0027682:53789-53808 | Msa1435260:CDS | 45.0% | |
| CTATAGAGATTCCTGTGCCT+GGG | + | tig0027682:53790-53809 | Msa1435260:CDS | 45.0% | |
| TGGTAAGGCTCGTACTAAAC+CGG | + | tig0027682:53866-53885 | Msa1435260:CDS | 45.0% | |
| GTACTAAACCGGTTGCTCAT+AGG | + | tig0027682:53877-53896 | Msa1435260:CDS | 45.0% | |
| GGAAAAGACCTATGAGCAAC+CGG | - | tig0027682:53888-53907 | None:intergenic | 45.0% | |
| TCCACCCTGTAAGTTTCATG+AGG | + | tig0027682:53905-53924 | Msa1435260:CDS | 45.0% | |
| CCACCCTGTAAGTTTCATGA+GGG | + | tig0027682:53906-53925 | Msa1435260:CDS | 45.0% | |
| CACCCTGTAAGTTTCATGAG+GGG | + | tig0027682:53907-53926 | Msa1435260:CDS | 45.0% | |
| CACCCCTCATGAAACTTACA+GGG | - | tig0027682:53912-53931 | None:intergenic | 45.0% | |
| CTGTAAGTTTCATGAGGGGT+GGG | + | tig0027682:53911-53930 | Msa1435260:CDS | 45.0% | |
| TGTAAGTTTCATGAGGGGTG+GGG | + | tig0027682:53912-53931 | Msa1435260:CDS | 45.0% | |
| GATTACCCCACGAATGCAAA+TGG | + | tig0027682:53948-53967 | Msa1435260:CDS | 45.0% | |
| TGGGATATTGTCTTGTGCTC+CGG | + | tig0027682:53968-53987 | Msa1435260:CDS | 45.0% | |
| TCAATCTCCCTCTGCAAAAC+CGG | - | tig0027682:53990-54009 | None:intergenic | 45.0% | |
| CTACTGCACTGAGGAGCAAT+TGG | + | tig0027682:53359-53378 | Msa1435260:CDS | 50.0% | |
| ! | TGGGCATTGTTATGGTGGGA+TGG | + | tig0027682:53488-53507 | Msa1435260:CDS | 50.0% |
| !!! | TTGTGCTGGTTTTGCTCGTG+AGG | + | tig0027682:53599-53618 | Msa1435260:CDS | 50.0% |
| !!! | TGTGCTGGTTTTGCTCGTGA+GGG | + | tig0027682:53600-53619 | Msa1435260:CDS | 50.0% |
| TGCTCGTGAGGGTGAGAATA+TGG | + | tig0027682:53611-53630 | Msa1435260:CDS | 50.0% | |
| ! | GGAGTATTCTTTGGCTGGGA+TGG | + | tig0027682:53674-53693 | Msa1435260:CDS | 50.0% |
| GGAGCTGCTGTTGTTGAATC+TGG | + | tig0027682:53834-53853 | Msa1435260:CDS | 50.0% | |
| GCTGCTGTTGTTGAATCTGG+TGG | + | tig0027682:53837-53856 | Msa1435260:CDS | 50.0% | |
| GCTGTTGTTGAATCTGGTGG+TGG | + | tig0027682:53840-53859 | Msa1435260:CDS | 50.0% | |
| !! | GTTGTTGAATCTGGTGGTGG+TGG | + | tig0027682:53843-53862 | Msa1435260:CDS | 50.0% |
| CCCTCATGAAACTTACAGGG+TGG | - | tig0027682:53909-53928 | None:intergenic | 50.0% | |
| CCACCCCTCATGAAACTTAC+AGG | - | tig0027682:53913-53932 | None:intergenic | 50.0% | |
| CCTGTAAGTTTCATGAGGGG+TGG | + | tig0027682:53910-53929 | Msa1435260:CDS | 50.0% | |
| TTTCATGAGGGGTGGGGATT+TGG | + | tig0027682:53918-53937 | Msa1435260:CDS | 50.0% | |
| AGGGGTGGGGATTTGGAAAT+GGG | + | tig0027682:53925-53944 | Msa1435260:CDS | 50.0% | |
| ! | TTGTGCTCCGGTTTTGCAGA+GGG | + | tig0027682:53980-53999 | Msa1435260:CDS | 50.0% |
| GGGAGATTGAATTCCCGAAG+AGG | + | tig0027682:54000-54019 | Msa1435260:CDS | 50.0% | |
| CTGCACTGAGGAGCAATTGG+AGG | + | tig0027682:53362-53381 | Msa1435260:CDS | 55.0% | |
| !! | CGGCGTTGAAAGCGGTTTTG+AGG | + | tig0027682:53463-53482 | Msa1435260:CDS | 55.0% |
| !! | GTTGAATCTGGTGGTGGTGG+TGG | + | tig0027682:53846-53865 | Msa1435260:CDS | 55.0% |
| !! | ATCTGGTGGTGGTGGTGGTA+AGG | + | tig0027682:53851-53870 | Msa1435260:CDS | 55.0% |
| GAGGGGTGGGGATTTGGAAA+TGG | + | tig0027682:53924-53943 | Msa1435260:CDS | 55.0% | |
| GGGGTGGGGATTTGGAAATG+GGG | + | tig0027682:53926-53945 | Msa1435260:CDS | 55.0% | |
| ! | CTTGTGCTCCGGTTTTGCAG+AGG | + | tig0027682:53979-53998 | Msa1435260:CDS | 55.0% |
| TCAGTGCAGTAGCCCCAACC+AGG | - | tig0027682:53351-53370 | None:intergenic | 60.0% | |
| TGGTTGGGGCTACTGCACTG+AGG | + | tig0027682:53350-53369 | Msa1435260:CDS | 60.0% | |
| ! | TGTGCCTGGGAGTGCGAGTG+CGG | + | tig0027682:53803-53822 | Msa1435260:CDS | 65.0% |
| GCACTCGCACTCCCAGGCAC+AGG | - | tig0027682:53804-53823 | None:intergenic | 70.0% | |
| ! | GTGCCTGGGAGTGCGAGTGC+GGG | + | tig0027682:53804-53823 | Msa1435260:CDS | 70.0% |
| GAGTGCGAGTGCGGGTGCGA+GGG | + | tig0027682:53812-53831 | Msa1435260:CDS | 70.0% | |
| AGTGCGAGTGCGGGTGCGAG+GGG | + | tig0027682:53813-53832 | Msa1435260:CDS | 70.0% | |
| GCACCCGCACTCGCACTCCC+AGG | - | tig0027682:53810-53829 | None:intergenic | 75.0% | |
| GGAGTGCGAGTGCGGGTGCG+AGG | + | tig0027682:53811-53830 | Msa1435260:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0027682 | gene | 53309 | 54043 | 53309 | ID=Msa1435260;Name=Msa1435260 |
| tig0027682 | mRNA | 53309 | 54043 | 53309 | ID=Msa1435260-mRNA-1;Parent=Msa1435260;Name=Msa1435260-mRNA-1;_AED=0.37;_eAED=0.38;_QI=0|-1|0|1|-1|1|1|0|244 |
| tig0027682 | exon | 53309 | 54043 | 53309 | ID=Msa1435260-mRNA-1:exon:9564;Parent=Msa1435260-mRNA-1 |
| tig0027682 | CDS | 53309 | 54043 | 53309 | ID=Msa1435260-mRNA-1:cds;Parent=Msa1435260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
