Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0324020 | XP_013463581.1 | 95.491 | 1131 | 17 | 4 | 1 | 1114 | 1 | 1114 | 0.0 | 2180 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0324020 | sp|Q8RYC8|ARFS_ARATH | 76.923 | 494 | 92 | 5 | 1 | 476 | 1 | 490 | 0.0 | 767 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0324020 | A0A072V7K3 | 95.491 | 1131 | 17 | 4 | 1 | 1114 | 1 | 1114 | 0.0 | 2180 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0324020 | TF | B3-ARF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0324000 | Msa0324020 | 0.956826 | 1.177075e-114 | -8.615850e-47 |
| Msa0324020 | Msa0437790 | -0.804964 | 1.677443e-49 | -8.615850e-47 |
| Msa0324020 | Msa0566090 | -0.807881 | 4.069463e-50 | -8.615850e-47 |
| Msa0324020 | Msa1166960 | -0.800008 | 1.762593e-48 | -8.615850e-47 |
| Msa0324020 | Msa1369180 | -0.804402 | 2.197524e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0324020 | MtrunA17_Chr2g0301251 | 95.491 | 1131 | 17 | 4 | 1 | 1114 | 1 | 1114 | 0.0 | 2180 |
| Msa0324020 | MtrunA17_Chr4g0070181 | 75.077 | 650 | 107 | 11 | 1 | 614 | 1 | 631 | 0.0 | 881 |
| Msa0324020 | MtrunA17_Chr8g0389081 | 59.227 | 569 | 179 | 13 | 15 | 548 | 21 | 571 | 1.42e-175 | 545 |
| Msa0324020 | MtrunA17_Chr8g0389081 | 42.276 | 369 | 164 | 17 | 774 | 1099 | 735 | 1097 | 1.44e-57 | 217 |
| Msa0324020 | MtrunA17_Chr2g0285461 | 56.008 | 491 | 162 | 15 | 14 | 473 | 14 | 481 | 3.64e-160 | 498 |
| Msa0324020 | MtrunA17_Chr2g0285461 | 42.453 | 212 | 97 | 8 | 890 | 1091 | 688 | 884 | 1.56e-33 | 140 |
| Msa0324020 | MtrunA17_Chr8g0376771 | 53.346 | 523 | 184 | 13 | 1 | 486 | 1 | 500 | 1.84e-157 | 491 |
| Msa0324020 | MtrunA17_Chr8g0376771 | 40.385 | 208 | 97 | 7 | 877 | 1078 | 687 | 873 | 1.27e-32 | 137 |
| Msa0324020 | MtrunA17_Chr5g0433301 | 55.699 | 465 | 163 | 11 | 15 | 449 | 16 | 467 | 5.88e-156 | 485 |
| Msa0324020 | MtrunA17_Chr5g0433301 | 59.341 | 91 | 37 | 0 | 988 | 1078 | 717 | 807 | 4.08e-30 | 129 |
| Msa0324020 | MtrunA17_Chr3g0109391 | 59.512 | 410 | 138 | 8 | 17 | 403 | 20 | 424 | 9.09e-155 | 482 |
| Msa0324020 | MtrunA17_Chr3g0109391 | 61.364 | 88 | 34 | 0 | 987 | 1074 | 724 | 811 | 3.38e-30 | 129 |
| Msa0324020 | MtrunA17_Chr1g0156321 | 63.271 | 373 | 112 | 6 | 15 | 366 | 35 | 403 | 1.02e-151 | 474 |
| Msa0324020 | MtrunA17_Chr1g0156321 | 60.952 | 105 | 41 | 0 | 974 | 1078 | 742 | 846 | 1.76e-33 | 139 |
| Msa0324020 | MtrunA17_Chr8g0385791 | 47.312 | 372 | 177 | 3 | 10 | 363 | 46 | 416 | 2.55e-107 | 355 |
| Msa0324020 | MtrunA17_Chr8g0385791 | 42.708 | 96 | 53 | 2 | 981 | 1075 | 705 | 799 | 5.92e-18 | 89.7 |
| Msa0324020 | MtrunA17_Chr2g0276781 | 48.980 | 343 | 153 | 5 | 19 | 342 | 19 | 358 | 4.72e-100 | 331 |
| Msa0324020 | MtrunA17_Chr2g0276781 | 43.299 | 97 | 53 | 2 | 980 | 1075 | 541 | 636 | 9.25e-19 | 92.0 |
| Msa0324020 | MtrunA17_Chr2g0282961 | 47.093 | 344 | 147 | 5 | 23 | 339 | 53 | 388 | 4.03e-91 | 305 |
| Msa0324020 | MtrunA17_Chr4g0046371 | 45.299 | 351 | 155 | 5 | 19 | 339 | 34 | 377 | 1.00e-89 | 304 |
| Msa0324020 | MtrunA17_Chr8g0346711 | 46.903 | 339 | 154 | 8 | 23 | 341 | 29 | 361 | 3.42e-89 | 301 |
| Msa0324020 | MtrunA17_Chr8g0346711 | 46.154 | 91 | 46 | 2 | 985 | 1074 | 557 | 645 | 2.29e-18 | 90.9 |
| Msa0324020 | MtrunA17_Chr2g0326281 | 44.972 | 358 | 155 | 6 | 23 | 339 | 56 | 412 | 6.80e-87 | 299 |
| Msa0324020 | MtrunA17_Chr2g0326281 | 48.454 | 97 | 48 | 2 | 981 | 1076 | 690 | 785 | 1.18e-21 | 101 |
| Msa0324020 | MtrunA17_Chr4g0009751 | 45.906 | 342 | 160 | 6 | 21 | 342 | 17 | 353 | 1.08e-86 | 293 |
| Msa0324020 | MtrunA17_Chr4g0009751 | 46.377 | 69 | 34 | 2 | 986 | 1053 | 555 | 621 | 1.05e-11 | 69.3 |
| Msa0324020 | MtrunA17_Chr4g0029671 | 44.638 | 345 | 162 | 5 | 23 | 339 | 54 | 397 | 1.86e-84 | 291 |
| Msa0324020 | MtrunA17_Chr4g0029671 | 47.423 | 97 | 49 | 2 | 981 | 1076 | 658 | 753 | 2.61e-21 | 100 |
| Msa0324020 | MtrunA17_Chr7g0239061 | 41.351 | 370 | 186 | 10 | 15 | 359 | 6 | 369 | 1.15e-78 | 272 |
| Msa0324020 | MtrunA17_Chr7g0239061 | 47.253 | 91 | 45 | 2 | 986 | 1075 | 570 | 658 | 6.83e-18 | 89.4 |
| Msa0324020 | MtrunA17_Chr2g0326761 | 36.118 | 407 | 195 | 10 | 18 | 365 | 6 | 406 | 5.08e-69 | 245 |
| Msa0324020 | MtrunA17_Chr1g0199681 | 36.049 | 405 | 187 | 12 | 18 | 360 | 89 | 483 | 2.32e-67 | 240 |
| Msa0324020 | MtrunA17_Chr4g0028971 | 35.407 | 418 | 197 | 7 | 14 | 365 | 3 | 413 | 3.39e-67 | 240 |
| Msa0324020 | MtrunA17_Chr1g0181211 | 33.990 | 406 | 201 | 7 | 12 | 355 | 16 | 416 | 1.17e-58 | 215 |
| Msa0324020 | MtrunA17_Chr7g0264171 | 32.151 | 423 | 201 | 11 | 18 | 365 | 26 | 437 | 2.61e-58 | 212 |
| Msa0324020 | MtrunA17_Chr3g0115271 | 32.718 | 379 | 191 | 7 | 19 | 342 | 15 | 384 | 7.38e-54 | 199 |
| Msa0324020 | MtrunA17_Chr7g0264161 | 34.628 | 309 | 172 | 6 | 32 | 318 | 1 | 301 | 2.58e-48 | 174 |
| Msa0324020 | MtrunA17_Chr5g0424931 | 29.919 | 371 | 197 | 10 | 18 | 340 | 14 | 369 | 3.72e-45 | 171 |
| Msa0324020 | MtrunA17_Chr5g0436761 | 33.143 | 350 | 193 | 10 | 16 | 340 | 5 | 338 | 1.90e-44 | 167 |
| Msa0324020 | MtrunA17_Chr5g0417281 | 31.198 | 359 | 196 | 9 | 18 | 348 | 6 | 341 | 1.40e-43 | 167 |
| Msa0324020 | MtrunA17_Chr8g0356211 | 37.991 | 229 | 118 | 6 | 134 | 343 | 2 | 225 | 6.31e-43 | 159 |
| Msa0324020 | MtrunA17_Chr1g0178011 | 29.412 | 374 | 228 | 10 | 18 | 367 | 7 | 368 | 3.68e-38 | 149 |
| Msa0324020 | MtrunA17_Chr2g0277461 | 28.940 | 349 | 213 | 7 | 20 | 344 | 10 | 347 | 4.09e-38 | 149 |
| Msa0324020 | MtrunA17_Chr5g0424741 | 28.191 | 376 | 209 | 11 | 18 | 340 | 7 | 374 | 2.74e-35 | 142 |
| Msa0324020 | MtrunA17_Chr2g0289221 | 30.061 | 326 | 180 | 11 | 20 | 318 | 17 | 321 | 4.68e-35 | 137 |
| Msa0324020 | MtrunA17_Chr5g0417211 | 28.313 | 332 | 179 | 9 | 20 | 318 | 9 | 314 | 3.04e-31 | 127 |
| Msa0324020 | MtrunA17_Chr2g0277531 | 27.640 | 322 | 190 | 9 | 20 | 318 | 17 | 318 | 1.46e-28 | 117 |
| Msa0324020 | MtrunA17_Chr5g0424801 | 27.859 | 341 | 210 | 11 | 20 | 338 | 9 | 335 | 3.39e-28 | 118 |
| Msa0324020 | MtrunA17_Chr5g0425261 | 27.859 | 341 | 210 | 11 | 20 | 338 | 9 | 335 | 4.67e-27 | 114 |
| Msa0324020 | MtrunA17_Chr1g0156301 | 48.571 | 105 | 38 | 1 | 974 | 1078 | 165 | 253 | 2.27e-24 | 103 |
| Msa0324020 | MtrunA17_Chr5g0425661 | 30.000 | 240 | 118 | 6 | 2 | 205 | 8 | 233 | 5.67e-22 | 96.3 |
| Msa0324020 | MtrunA17_Chr1g0156311 | 41.593 | 113 | 32 | 4 | 227 | 338 | 1 | 80 | 4.80e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0324020 | AT1G19220.1 | 76.923 | 494 | 92 | 5 | 1 | 476 | 1 | 490 | 0.0 | 767 |
| Msa0324020 | AT5G20730.2 | 74.699 | 498 | 105 | 5 | 1 | 477 | 1 | 498 | 0.0 | 739 |
| Msa0324020 | AT5G20730.3 | 74.549 | 499 | 105 | 6 | 1 | 477 | 1 | 499 | 0.0 | 735 |
| Msa0324020 | AT5G20730.1 | 74.549 | 499 | 105 | 6 | 1 | 477 | 1 | 499 | 0.0 | 734 |
| Msa0324020 | AT1G30330.1 | 60.798 | 426 | 138 | 10 | 1 | 403 | 1 | 420 | 2.17e-159 | 497 |
| Msa0324020 | AT1G30330.1 | 59.596 | 99 | 40 | 0 | 980 | 1078 | 788 | 886 | 5.25e-32 | 135 |
| Msa0324020 | AT1G30330.3 | 61.893 | 412 | 128 | 10 | 15 | 403 | 17 | 422 | 1.09e-157 | 493 |
| Msa0324020 | AT1G30330.3 | 59.596 | 99 | 40 | 0 | 980 | 1078 | 790 | 888 | 5.50e-32 | 135 |
| Msa0324020 | AT1G30330.2 | 61.893 | 412 | 128 | 10 | 15 | 403 | 17 | 422 | 1.09e-157 | 493 |
| Msa0324020 | AT1G30330.2 | 59.596 | 99 | 40 | 0 | 980 | 1078 | 790 | 888 | 5.50e-32 | 135 |
| Msa0324020 | AT5G37020.2 | 55.605 | 446 | 161 | 11 | 1 | 415 | 1 | 440 | 6.04e-151 | 470 |
| Msa0324020 | AT5G37020.2 | 57.333 | 75 | 32 | 0 | 980 | 1054 | 699 | 773 | 1.95e-23 | 107 |
| Msa0324020 | AT5G37020.1 | 55.605 | 446 | 161 | 11 | 1 | 415 | 1 | 440 | 1.53e-150 | 470 |
| Msa0324020 | AT5G37020.1 | 56.000 | 100 | 44 | 0 | 980 | 1079 | 699 | 798 | 2.77e-30 | 129 |
| Msa0324020 | AT1G19850.1 | 57.920 | 423 | 147 | 11 | 15 | 412 | 45 | 461 | 2.80e-147 | 464 |
| Msa0324020 | AT1G19850.1 | 50.327 | 153 | 67 | 4 | 935 | 1078 | 733 | 885 | 1.09e-34 | 144 |
| Msa0324020 | AT1G19850.2 | 57.920 | 423 | 147 | 11 | 15 | 412 | 34 | 450 | 2.87e-147 | 464 |
| Msa0324020 | AT1G19850.2 | 50.327 | 153 | 67 | 4 | 935 | 1078 | 722 | 874 | 1.02e-34 | 144 |
| Msa0324020 | AT5G62000.4 | 49.319 | 367 | 149 | 6 | 19 | 358 | 57 | 413 | 5.21e-107 | 355 |
| Msa0324020 | AT5G62000.4 | 46.667 | 90 | 46 | 2 | 986 | 1074 | 733 | 821 | 1.48e-18 | 92.0 |
| Msa0324020 | AT5G62000.2 | 49.319 | 367 | 149 | 6 | 19 | 358 | 57 | 413 | 6.01e-107 | 355 |
| Msa0324020 | AT5G62000.2 | 46.667 | 90 | 46 | 2 | 986 | 1074 | 733 | 821 | 1.22e-18 | 92.4 |
| Msa0324020 | AT5G62000.5 | 49.319 | 367 | 149 | 6 | 19 | 358 | 57 | 413 | 6.01e-107 | 355 |
| Msa0324020 | AT5G62000.5 | 46.667 | 90 | 46 | 2 | 986 | 1074 | 733 | 821 | 1.22e-18 | 92.4 |
| Msa0324020 | AT5G62000.3 | 49.319 | 367 | 149 | 6 | 19 | 358 | 57 | 413 | 6.01e-107 | 355 |
| Msa0324020 | AT5G62000.3 | 46.667 | 90 | 46 | 2 | 986 | 1074 | 733 | 821 | 1.22e-18 | 92.4 |
| Msa0324020 | AT5G62000.1 | 49.319 | 367 | 149 | 6 | 19 | 358 | 57 | 413 | 6.01e-107 | 355 |
| Msa0324020 | AT5G62000.1 | 46.667 | 90 | 46 | 2 | 986 | 1074 | 733 | 821 | 1.22e-18 | 92.4 |
| Msa0324020 | AT5G37020.3 | 52.286 | 350 | 132 | 9 | 96 | 415 | 1 | 345 | 7.40e-104 | 343 |
| Msa0324020 | AT5G37020.3 | 56.000 | 100 | 44 | 0 | 980 | 1079 | 604 | 703 | 1.70e-30 | 130 |
| Msa0324020 | AT1G59750.4 | 46.736 | 383 | 178 | 7 | 3 | 363 | 2 | 380 | 5.24e-102 | 336 |
| Msa0324020 | AT1G59750.4 | 40.833 | 120 | 68 | 3 | 980 | 1098 | 531 | 648 | 5.21e-19 | 93.2 |
| Msa0324020 | AT1G59750.2 | 46.736 | 383 | 178 | 7 | 3 | 363 | 2 | 380 | 7.20e-102 | 336 |
| Msa0324020 | AT1G59750.2 | 40.833 | 120 | 68 | 3 | 980 | 1098 | 533 | 650 | 5.61e-19 | 93.2 |
| Msa0324020 | AT1G59750.1 | 46.736 | 383 | 178 | 7 | 3 | 363 | 2 | 380 | 8.62e-102 | 336 |
| Msa0324020 | AT1G59750.1 | 40.833 | 120 | 68 | 3 | 980 | 1098 | 536 | 653 | 5.31e-19 | 93.2 |
| Msa0324020 | AT1G59750.3 | 46.736 | 383 | 178 | 7 | 3 | 363 | 2 | 380 | 8.62e-102 | 336 |
| Msa0324020 | AT1G59750.3 | 40.833 | 120 | 68 | 3 | 980 | 1098 | 536 | 653 | 5.31e-19 | 93.2 |
| Msa0324020 | AT5G60450.2 | 46.348 | 356 | 162 | 5 | 14 | 342 | 32 | 385 | 1.05e-94 | 320 |
| Msa0324020 | AT5G60450.2 | 46.237 | 93 | 48 | 2 | 981 | 1072 | 636 | 727 | 7.78e-19 | 92.8 |
| Msa0324020 | AT5G60450.1 | 46.857 | 350 | 157 | 5 | 20 | 342 | 62 | 409 | 9.95e-94 | 317 |
| Msa0324020 | AT5G60450.1 | 46.237 | 93 | 48 | 2 | 981 | 1072 | 660 | 751 | 9.22e-19 | 92.8 |
| Msa0324020 | AT2G33860.1 | 45.640 | 344 | 152 | 5 | 23 | 339 | 54 | 389 | 1.03e-88 | 298 |
| Msa0324020 | AT2G46530.1 | 45.299 | 351 | 165 | 9 | 20 | 350 | 18 | 361 | 5.19e-87 | 294 |
| Msa0324020 | AT2G46530.1 | 42.453 | 106 | 55 | 3 | 980 | 1081 | 484 | 587 | 6.53e-16 | 83.2 |
| Msa0324020 | AT2G46530.3 | 44.054 | 370 | 177 | 10 | 1 | 350 | 23 | 382 | 5.63e-87 | 294 |
| Msa0324020 | AT2G46530.3 | 42.453 | 106 | 55 | 3 | 980 | 1081 | 505 | 608 | 7.39e-16 | 82.8 |
| Msa0324020 | AT4G23980.2 | 45.283 | 371 | 175 | 9 | 9 | 359 | 1 | 363 | 1.38e-86 | 293 |
| Msa0324020 | AT4G23980.2 | 45.918 | 98 | 50 | 2 | 979 | 1075 | 514 | 609 | 1.18e-18 | 92.0 |
| Msa0324020 | AT4G23980.1 | 45.283 | 371 | 175 | 9 | 9 | 359 | 1 | 363 | 1.73e-86 | 293 |
| Msa0324020 | AT4G23980.1 | 45.918 | 98 | 50 | 2 | 979 | 1075 | 516 | 611 | 1.28e-18 | 92.0 |
| Msa0324020 | AT3G61830.1 | 43.988 | 341 | 167 | 6 | 20 | 341 | 22 | 357 | 1.05e-84 | 287 |
| Msa0324020 | AT3G61830.1 | 45.361 | 97 | 50 | 2 | 980 | 1075 | 483 | 577 | 5.05e-17 | 86.7 |
| Msa0324020 | AT1G34410.1 | 40.286 | 350 | 185 | 4 | 9 | 341 | 13 | 355 | 3.60e-78 | 269 |
| Msa0324020 | AT1G34410.1 | 42.105 | 95 | 52 | 2 | 979 | 1072 | 504 | 596 | 1.70e-13 | 75.5 |
| Msa0324020 | AT1G35540.1 | 40.634 | 347 | 182 | 4 | 9 | 338 | 13 | 352 | 2.81e-77 | 267 |
| Msa0324020 | AT1G35540.1 | 40.206 | 97 | 55 | 2 | 979 | 1074 | 503 | 597 | 2.89e-14 | 77.8 |
| Msa0324020 | AT1G35240.1 | 38.873 | 355 | 193 | 4 | 9 | 346 | 13 | 360 | 4.05e-76 | 263 |
| Msa0324020 | AT1G35240.1 | 41.053 | 95 | 53 | 2 | 979 | 1072 | 490 | 582 | 4.86e-13 | 73.9 |
| Msa0324020 | AT1G34310.1 | 39.769 | 347 | 185 | 4 | 9 | 338 | 13 | 352 | 2.18e-74 | 258 |
| Msa0324020 | AT1G34310.1 | 44.444 | 81 | 42 | 2 | 986 | 1065 | 511 | 589 | 3.96e-13 | 73.9 |
| Msa0324020 | AT1G35520.1 | 40.240 | 333 | 175 | 4 | 23 | 338 | 27 | 352 | 1.60e-72 | 253 |
| Msa0324020 | AT1G35520.1 | 42.045 | 88 | 48 | 2 | 979 | 1065 | 504 | 589 | 3.42e-13 | 74.3 |
| Msa0324020 | AT3G61830.2 | 42.453 | 318 | 159 | 6 | 51 | 349 | 2 | 314 | 7.60e-71 | 247 |
| Msa0324020 | AT3G61830.2 | 45.361 | 97 | 50 | 2 | 980 | 1075 | 432 | 526 | 3.64e-17 | 87.0 |
| Msa0324020 | AT1G34170.1 | 38.166 | 338 | 183 | 4 | 23 | 341 | 25 | 355 | 1.25e-70 | 245 |
| Msa0324020 | AT1G34390.1 | 38.462 | 364 | 198 | 5 | 9 | 355 | 13 | 367 | 3.93e-70 | 246 |
| Msa0324020 | AT1G34390.1 | 40.449 | 89 | 50 | 2 | 979 | 1066 | 502 | 588 | 3.62e-12 | 70.9 |
| Msa0324020 | AT2G28350.2 | 37.565 | 386 | 171 | 11 | 18 | 340 | 5 | 383 | 2.29e-65 | 234 |
| Msa0324020 | AT2G28350.1 | 37.565 | 386 | 171 | 11 | 18 | 340 | 5 | 383 | 6.18e-65 | 234 |
| Msa0324020 | AT4G30080.1 | 35.872 | 407 | 192 | 12 | 15 | 360 | 11 | 409 | 9.00e-65 | 233 |
| Msa0324020 | AT1G34170.2 | 35.503 | 338 | 166 | 4 | 23 | 341 | 25 | 329 | 9.96e-62 | 219 |
| Msa0324020 | AT2G33860.2 | 47.619 | 231 | 104 | 1 | 126 | 339 | 2 | 232 | 1.49e-61 | 218 |
| Msa0324020 | AT1G34170.3 | 35.503 | 338 | 166 | 4 | 23 | 341 | 25 | 329 | 4.73e-61 | 219 |
| Msa0324020 | AT2G46530.2 | 44.628 | 242 | 113 | 4 | 126 | 350 | 37 | 274 | 1.39e-59 | 214 |
| Msa0324020 | AT2G46530.2 | 42.453 | 106 | 55 | 3 | 980 | 1081 | 397 | 500 | 3.02e-16 | 83.6 |
| Msa0324020 | AT1G77850.1 | 29.384 | 422 | 221 | 10 | 10 | 369 | 6 | 412 | 3.90e-49 | 185 |
| Msa0324020 | AT1G77850.2 | 29.384 | 422 | 221 | 10 | 10 | 369 | 6 | 412 | 5.67e-49 | 185 |
| Msa0324020 | AT1G43950.1 | 37.850 | 214 | 115 | 2 | 9 | 208 | 13 | 222 | 2.58e-38 | 143 |
Find 294 sgRNAs with CRISPR-Local
Find 548 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTAGTATTGTTTATGTTTA+TGG | 0.020273 | 2_4:+28891610 | None:intergenic |
| GCATAGACCTCGTCGGTTTC+AGG | 0.138329 | 2_4:+28889226 | None:intergenic |
| CATTCAACTTGTACACATTT+AGG | 0.142765 | 2_4:-28883835 | Msa0324020:three_prime_UTR |
| CAAAACTTGTTGTCTAATTA+TGG | 0.203079 | 2_4:-28885197 | Msa0324020:CDS |
| CATGAATTACACGGTGTTAA+AGG | 0.217709 | 2_4:-28885455 | Msa0324020:CDS |
| GCCCAAGTAGAGTTTCAATT+TGG | 0.221186 | 2_4:-28887557 | Msa0324020:CDS |
| CTCTTGCTACCTGGCATTCC+TGG | 0.226169 | 2_4:+28887462 | None:intergenic |
| CGAGCTGTTGGGGCTGATGC+TGG | 0.233357 | 2_4:+28885792 | None:intergenic |
| AATGGTTACTTGGCTAATTC+TGG | 0.236946 | 2_4:-28890806 | Msa0324020:CDS |
| GGCTGACCTACTTTATTTAC+AGG | 0.237354 | 2_4:+28889187 | None:intergenic |
| TTGACTTGGTTCGGTAAATT+AGG | 0.237724 | 2_4:+28886580 | None:intergenic |
| AACTAGAACAAGTGAAATTA+AGG | 0.255713 | 2_4:+28891163 | None:intergenic |
| CCATTTGCTTCTAACCTTGA+TGG | 0.255805 | 2_4:-28885272 | Msa0324020:CDS |
| GCAAATGGTAAATTACTTCT+AGG | 0.269378 | 2_4:+28885287 | None:intergenic |
| CTTCTTCTTGCTTCTTTGTA+TGG | 0.275612 | 2_4:-28883777 | Msa0324020:three_prime_UTR |
| AGCAGCAGCAACAGCAGCAG+AGG | 0.281333 | 2_4:-28886462 | Msa0324020:CDS |
| TTCAGGAGTACGCAGATATA+TGG | 0.281856 | 2_4:-28888107 | Msa0324020:CDS |
| GGATTATAAAATATAGTAAA+TGG | 0.283378 | 2_4:+28888331 | None:intergenic |
| AGTTAGAAAGTGGGAAGTTC+TGG | 0.291052 | 2_4:+28885342 | None:intergenic |
| ATTCAACTTGTACACATTTA+GGG | 0.292744 | 2_4:-28883834 | Msa0324020:three_prime_UTR |
| GTAGTAAAGGAATCTGTTCT+TGG | 0.296817 | 2_4:+28883639 | None:intergenic |
| GATCATATGGAAGCTTCTTC+TGG | 0.302688 | 2_4:-28885398 | Msa0324020:CDS |
| CTTGGAACATCTAAAGATCT+AGG | 0.318703 | 2_4:+28883657 | None:intergenic |
| TTATGCAATTGAGTGATAAT+TGG | 0.319250 | 2_4:-28883399 | Msa0324020:three_prime_UTR |
| GCAGCAGAGGCAACAGCAGC+TGG | 0.320179 | 2_4:-28886449 | Msa0324020:CDS |
| ATGTTTGAGACAGAGGATTC+AGG | 0.322640 | 2_4:-28888124 | Msa0324020:CDS |
| CTCACAATGGCGCAATCTTC+AGG | 0.324777 | 2_4:-28888038 | Msa0324020:intron |
| AGTTTCCAGTCAACCCTTAC+AGG | 0.328127 | 2_4:+28884506 | None:intergenic |
| TAGGCTGCTGAGGCATTTGC+TGG | 0.328365 | 2_4:+28885819 | None:intergenic |
| GGTTGCTGTACACACTGATT+TGG | 0.343901 | 2_4:+28886280 | None:intergenic |
| CTGGCATTCCTGGTTGCTTC+GGG | 0.345256 | 2_4:+28887472 | None:intergenic |
| TTCTTGTCGGCGATGACCCT+TGG | 0.345263 | 2_4:-28884454 | Msa0324020:CDS |
| CCTGGCATTCCTGGTTGCTT+CGG | 0.347377 | 2_4:+28887471 | None:intergenic |
| GAAATTCCTATTGCCGATAC+TGG | 0.348693 | 2_4:-28885074 | Msa0324020:CDS |
| ATGATAGTATCTTTATGCTT+TGG | 0.350451 | 2_4:+28884027 | None:intergenic |
| GTACACACTGATTTGGAATC+TGG | 0.352315 | 2_4:+28886287 | None:intergenic |
| GTTGTTGGTCTATTTGTTGC+TGG | 0.357767 | 2_4:+28886137 | None:intergenic |
| TGCGTTGTTTCCGAGCTGTT+GGG | 0.359910 | 2_4:+28885781 | None:intergenic |
| AGATATATGGGGACAATCAC+TGG | 0.365166 | 2_4:-28888094 | Msa0324020:CDS |
| AATGATTTGGCTCGTATGTT+TGG | 0.371161 | 2_4:-28884551 | Msa0324020:CDS |
| TTCCAATCAGCTGGTAAGAA+TGG | 0.372451 | 2_4:-28886196 | Msa0324020:CDS |
| GTAGCTGCTAGTGCTTGATT+AGG | 0.372561 | 2_4:-28883581 | Msa0324020:three_prime_UTR |
| ATGCCATAACTCTGAATTGA+TGG | 0.376248 | 2_4:+28890107 | None:intergenic |
| TGATCCACTACAAGCTTGAT+TGG | 0.376400 | 2_4:+28883947 | None:intergenic |
| ATCCATTCTTACCAGCTGAT+TGG | 0.381945 | 2_4:+28886194 | None:intergenic |
| TGTAGTGTCATGTAAATCTT+TGG | 0.383056 | 2_4:+28888777 | None:intergenic |
| GGAGGTGGACAAATGTAAAA+AGG | 0.387268 | 2_4:+28887513 | None:intergenic |
| ATCAACTTGGATGGAAGGTT+AGG | 0.397065 | 2_4:+28889885 | None:intergenic |
| TGAAGAACTCCGGAATGATT+TGG | 0.398506 | 2_4:-28884564 | Msa0324020:CDS |
| GGATTGGAAGTTCAGTATCT+TGG | 0.399996 | 2_4:+28886642 | None:intergenic |
| TGAAGCTGGGAGTAGGTTAC+CGG | 0.404842 | 2_4:+28886259 | None:intergenic |
| AAGCAGGTTTGAGAGGAATA+AGG | 0.406136 | 2_4:+28891372 | None:intergenic |
| CCCAAGTAGAGTTTCAATTT+GGG | 0.407264 | 2_4:-28887556 | Msa0324020:CDS |
| TGGGGCTGATGCTGGGACAT+AGG | 0.410824 | 2_4:+28885800 | None:intergenic |
| GGCTCCTTCTAATGGTTACT+TGG | 0.410885 | 2_4:-28890816 | Msa0324020:CDS |
| AAACAACTCATTAAAGATGT+AGG | 0.414924 | 2_4:+28891556 | None:intergenic |
| AGAAATCAACCAGACACATT+TGG | 0.415702 | 2_4:-28885551 | Msa0324020:CDS |
| CTACAAGCTTGATTGGTGAT+TGG | 0.416510 | 2_4:+28883954 | None:intergenic |
| TTCTTCATACCCTTTGTAAC+GGG | 0.417033 | 2_4:+28884580 | None:intergenic |
| TCAGGAGTACGCAGATATAT+GGG | 0.418411 | 2_4:-28888106 | Msa0324020:CDS |
| TGAAAAGCAGCAACTTCTCT+TGG | 0.419190 | 2_4:-28888467 | Msa0324020:CDS |
| AGAGTAACTGTTGCTGAAGC+TGG | 0.421787 | 2_4:+28886245 | None:intergenic |
| CTACTTTATTTACAGGTTGA+AGG | 0.422462 | 2_4:+28889194 | None:intergenic |
| TAGTGCTGGTTGCTGTCTAC+TGG | 0.423013 | 2_4:+28888432 | None:intergenic |
| TCTTGTCGGCGATGACCCTT+GGG | 0.423375 | 2_4:-28884453 | Msa0324020:CDS |
| GTACAGAGCTTTATTATACT+TGG | 0.423618 | 2_4:+28888180 | None:intergenic |
| AAAACTCCAGTATCGGCAAT+AGG | 0.424122 | 2_4:+28885068 | None:intergenic |
| ACTATGAATAACGGCACAAT+TGG | 0.425559 | 2_4:-28886316 | Msa0324020:CDS |
| CCCACTTTCTAACTTCTACA+TGG | 0.426847 | 2_4:-28885333 | Msa0324020:CDS |
| CTCAATGCAACCGCCAGCTC+AGG | 0.427329 | 2_4:-28888809 | Msa0324020:CDS |
| GAGCTGTTGGGGCTGATGCT+GGG | 0.429491 | 2_4:+28885793 | None:intergenic |
| TAGAGAGCGCAGCAGGGGAT+TGG | 0.429565 | 2_4:+28886626 | None:intergenic |
| GAGTTATGGCATGCTTGTGC+CGG | 0.430189 | 2_4:-28890096 | Msa0324020:CDS |
| TGCAATTGATTGACTTGGTT+CGG | 0.430644 | 2_4:+28886571 | None:intergenic |
| GATATTAGTTCACAGTCGTT+TGG | 0.431235 | 2_4:-28885134 | Msa0324020:CDS |
| TGCTGCTGCAGCTGGTTTAA+CGG | 0.434073 | 2_4:+28886481 | None:intergenic |
| AAAAGAATTCTGACGGTTGT+TGG | 0.435058 | 2_4:+28889009 | None:intergenic |
| AGGTGCAATCAATGATCATA+TGG | 0.437541 | 2_4:-28885411 | Msa0324020:CDS |
| CTTGGATTAGAGAGCGCAGC+AGG | 0.437669 | 2_4:+28886619 | None:intergenic |
| TTAGCCAAGTAACCATTAGA+AGG | 0.437895 | 2_4:+28890812 | None:intergenic |
| GTTGCTGAGACCACGAGGCC+GGG | 0.440637 | 2_4:+28886542 | None:intergenic |
| GGAATTTCATTTGAGCATCC+TGG | 0.441538 | 2_4:+28885089 | None:intergenic |
| CTCCTGCATCAGATTATTCG+TGG | 0.443050 | 2_4:+28885508 | None:intergenic |
| ATGAGCTTGGAAGGGGACTT+AGG | 0.443131 | 2_4:-28883987 | Msa0324020:CDS |
| CACATTTGGAGGGCCTTCAA+TGG | 0.443269 | 2_4:-28885537 | Msa0324020:CDS |
| AGTGTCTTCGTTAGCACAAA+AGG | 0.446270 | 2_4:-28888606 | Msa0324020:intron |
| GGTTTATTAAATTGAAGACT+TGG | 0.448180 | 2_4:+28886601 | None:intergenic |
| TCCCAAATTGAAACTCTACT+TGG | 0.450964 | 2_4:+28887555 | None:intergenic |
| TTGCTGAGACCACGAGGCCG+GGG | 0.452553 | 2_4:+28886543 | None:intergenic |
| CAGAGGCAACAGCAGCTGGC+TGG | 0.453385 | 2_4:-28886445 | Msa0324020:CDS |
| TGGATGGGTCATCAGTGTTA+AGG | 0.453385 | 2_4:+28886662 | None:intergenic |
| GCATGCTTGTGCCGGGCCAT+TGG | 0.453483 | 2_4:-28890088 | Msa0324020:CDS |
| AGTTTCAGCTGTGGGTCAGC+TGG | 0.454956 | 2_4:-28883522 | Msa0324020:three_prime_UTR |
| ACATACGAGCCAAATCATTC+CGG | 0.454966 | 2_4:+28884555 | None:intergenic |
| CAAATAGACCAACAACAATC+TGG | 0.455229 | 2_4:-28886130 | Msa0324020:CDS |
| CATAGACCTCGTCGGTTTCA+GGG | 0.457502 | 2_4:+28889227 | None:intergenic |
| GTAAGAGACCAGATTGTTGT+TGG | 0.459167 | 2_4:+28886122 | None:intergenic |
| TGCAGCTGGTTTAACGGCAT+TGG | 0.461016 | 2_4:+28886487 | None:intergenic |
| ACCTCAAGTTCAATCTTCCC+TGG | 0.462305 | 2_4:-28886799 | Msa0324020:CDS |
| ATGCGTTGTTTCCGAGCTGT+TGG | 0.464290 | 2_4:+28885780 | None:intergenic |
| CGCCGGGAAATCAGAAGAAA+AGG | 0.467075 | 2_4:+28891420 | None:intergenic |
| AAGATCCTGTAAGGGTTGAC+TGG | 0.472321 | 2_4:-28884511 | Msa0324020:CDS |
| ATAATGAAGGCTCCTTCTAA+TGG | 0.474217 | 2_4:-28890824 | Msa0324020:CDS |
| CCTGGCTTAAAAGACATGTT+TGG | 0.475082 | 2_4:+28885107 | None:intergenic |
| AAATCAGTGTGTACAGCAAC+CGG | 0.475491 | 2_4:-28886278 | Msa0324020:CDS |
| AAGAAAGCATGTTCTAAAGT+AGG | 0.477542 | 2_4:+28883604 | None:intergenic |
| TGTTGCTGAGACCACGAGGC+CGG | 0.477611 | 2_4:+28886541 | None:intergenic |
| AGTTCATACATAGCTGCATC+CGG | 0.477765 | 2_4:-28883719 | Msa0324020:three_prime_UTR |
| CTGTGAATTTGTGATTCCAT+TGG | 0.479325 | 2_4:-28888203 | Msa0324020:CDS |
| CCATCAAGGTTAGAAGCAAA+TGG | 0.481350 | 2_4:+28885272 | None:intergenic |
| TTGGCAACTATTTCCTGAGC+TGG | 0.481645 | 2_4:+28888796 | None:intergenic |
| GACAGCTAGAAGATCCTGTA+AGG | 0.482598 | 2_4:-28884520 | Msa0324020:CDS |
| CAGAATGATGTTTGAGACAG+AGG | 0.483025 | 2_4:-28888131 | Msa0324020:CDS |
| TTGTTCTAGTTGCAAAGTTG+TGG | 0.483565 | 2_4:-28891151 | Msa0324020:five_prime_UTR |
| TTGAGAGGAATAAGGAAGGA+GGG | 0.484479 | 2_4:+28891380 | None:intergenic |
| ATGGCGAAGTTGAGCATGAT+GGG | 0.485788 | 2_4:+28885615 | None:intergenic |
| CGGAAACAACGCATTCTCAA+TGG | 0.486956 | 2_4:-28885771 | Msa0324020:CDS |
| GTATGACAAGGAAGCAATGC+TGG | 0.489116 | 2_4:-28889057 | Msa0324020:CDS |
| CAACAAAATTTCCAATCAGC+TGG | 0.489118 | 2_4:-28886205 | Msa0324020:CDS |
| GAAAAGCAGCAACTTCTCTT+GGG | 0.491836 | 2_4:-28888466 | Msa0324020:CDS |
| GGTTGCAGCATCTATGCAAA+AGG | 0.492031 | 2_4:-28889931 | Msa0324020:CDS |
| TTCGTGGTTTCAACCATTGA+AGG | 0.495221 | 2_4:+28885524 | None:intergenic |
| GGCGAAATTTGAGACATTTG+AGG | 0.496220 | 2_4:+28886016 | None:intergenic |
| TTCAGCTCATATTTCAATGT+CGG | 0.497110 | 2_4:-28891497 | Msa0324020:five_prime_UTR |
| CAATGGAATCACAAATTCAC+AGG | 0.497191 | 2_4:+28888204 | None:intergenic |
| AGTTATGGCATGCTTGTGCC+GGG | 0.497967 | 2_4:-28890095 | Msa0324020:CDS |
| GAAGATTGAAGAAGATTCAG+AGG | 0.498987 | 2_4:-28891106 | Msa0324020:five_prime_UTR |
| CCTCTTGAGAGCAAAGGATC+AGG | 0.499340 | 2_4:+28885242 | None:intergenic |
| CTTGTACACATTTAGGGAGA+TGG | 0.500198 | 2_4:-28883828 | Msa0324020:three_prime_UTR |
| CCTGGTTGCTTCGGGAACTT+CGG | 0.502765 | 2_4:+28887480 | None:intergenic |
| GCTGTTGCAATTGATTGACT+TGG | 0.504175 | 2_4:+28886566 | None:intergenic |
| AGGCCATCAATTCAGAGTTA+TGG | 0.504293 | 2_4:-28890110 | Msa0324020:CDS |
| GATGGAAGGTTAGGGTAACT+TGG | 0.505429 | 2_4:+28889894 | None:intergenic |
| TCAAGTGACAGCATGCATAT+CGG | 0.505728 | 2_4:-28888394 | Msa0324020:CDS |
| CTTTCTAACTTCTACATGGA+TGG | 0.506231 | 2_4:-28885329 | Msa0324020:CDS |
| CTGGTTTGAGTTTAGTACAA+TGG | 0.510429 | 2_4:-28886780 | Msa0324020:CDS |
| AAAAGCAAAGCAGGTTTGAG+AGG | 0.510706 | 2_4:+28891365 | None:intergenic |
| TACTTTATTTACAGGTTGAA+GGG | 0.510836 | 2_4:+28889195 | None:intergenic |
| TGCTGCTGTTGAGGCTGCTG+CGG | 0.511253 | 2_4:+28886367 | None:intergenic |
| AAGTTCTGGTGGATGTTACC+AGG | 0.511320 | 2_4:+28885356 | None:intergenic |
| CCGAAGCAACCAGGAATGCC+AGG | 0.511694 | 2_4:-28887471 | Msa0324020:intron |
| ACTAGAACAAGTGAAATTAA+GGG | 0.512430 | 2_4:+28891164 | None:intergenic |
| GGCTGTTGTTGCTGTGGCTG+CGG | 0.513113 | 2_4:+28886409 | None:intergenic |
| GCAACAAAGCATGTTGCAAA+GGG | 0.513153 | 2_4:-28886050 | Msa0324020:CDS |
| AGCAATGCTGGCTTCAGACA+TGG | 0.513883 | 2_4:-28889045 | Msa0324020:CDS |
| GTTCTTCATACCCTTTGTAA+CGG | 0.514589 | 2_4:+28884579 | None:intergenic |
| GCAGTGTGCGGACGCAGACC+CGG | 0.515921 | 2_4:+28883700 | None:intergenic |
| TAAACAACAAGGCTTCCAAC+AGG | 0.516685 | 2_4:+28890054 | None:intergenic |
| AAGAGAGCTATGCCATGGCT+TGG | 0.516884 | 2_4:-28886844 | Msa0324020:CDS |
| ACATCGTACGGTATTGATCC+TGG | 0.518718 | 2_4:-28885374 | Msa0324020:CDS |
| GAAGGCCCTCCAAATGTGTC+TGG | 0.521211 | 2_4:+28885542 | None:intergenic |
| GAAAACGACATTCTTCTTGT+CGG | 0.521587 | 2_4:-28884467 | Msa0324020:CDS |
| TGCAACAAAGCATGTTGCAA+AGG | 0.522595 | 2_4:-28886051 | Msa0324020:CDS |
| TGATGTTGTTGCTGCTGTTG+AGG | 0.525981 | 2_4:+28886358 | None:intergenic |
| CTTTGTGGTAAGAATCAAAA+GGG | 0.526926 | 2_4:-28891012 | Msa0324020:five_prime_UTR |
| AAGATTTACATGACACTACA+TGG | 0.527199 | 2_4:-28888774 | Msa0324020:CDS |
| CAAAATACAACTATGAATAA+CGG | 0.529448 | 2_4:-28886325 | Msa0324020:CDS |
| CAATCAATTGCAACAGCCCC+CGG | 0.529852 | 2_4:-28886560 | Msa0324020:CDS |
| TGAGAAAATATTCCCACCTC+TGG | 0.530081 | 2_4:-28888922 | Msa0324020:intron |
| ACTTTGTGGTAAGAATCAAA+AGG | 0.531978 | 2_4:-28891013 | Msa0324020:five_prime_UTR |
| TATGTAATTGGATAACTTTG+TGG | 0.532114 | 2_4:-28891027 | Msa0324020:five_prime_UTR |
| AGAAGCTGAGACTGCAAAAG+TGG | 0.533015 | 2_4:+28885854 | None:intergenic |
| TCAACTTGGATGGAAGGTTA+GGG | 0.535046 | 2_4:+28889886 | None:intergenic |
| TGGAAGTTCAGTATCTTGGA+TGG | 0.535124 | 2_4:+28886646 | None:intergenic |
| GCTCGTATGTTTGGTATCGA+AGG | 0.537893 | 2_4:-28884542 | Msa0324020:CDS |
| CTTCAGCAACAGTTACTCTC+AGG | 0.538721 | 2_4:-28886241 | Msa0324020:CDS |
| TTGATATTGTGGAATACTTG+AGG | 0.538793 | 2_4:-28890926 | Msa0324020:five_prime_UTR |
| TACTTGGCTAATTCTGGTGA+AGG | 0.539140 | 2_4:-28890800 | Msa0324020:intron |
| GTACAACAAATGAGCTTGGA+AGG | 0.539249 | 2_4:-28883996 | Msa0324020:CDS |
| AGTGGGGAAGATGTAGAAAG+TGG | 0.539993 | 2_4:+28885872 | None:intergenic |
| AATCACTGGGATCAGTGACT+TGG | 0.541031 | 2_4:-28888080 | Msa0324020:CDS |
| GCTTTATTATACTTGGCCAA+TGG | 0.542195 | 2_4:+28888187 | None:intergenic |
| GTGACTTGGATCCTGTCCGC+TGG | 0.543304 | 2_4:-28888066 | Msa0324020:CDS |
| CTTGTTGTTTACTTTCCTCA+AGG | 0.543973 | 2_4:-28890042 | Msa0324020:CDS |
| CATTGTACTAAACTCAAACC+AGG | 0.545470 | 2_4:+28886781 | None:intergenic |
| TCCATGTAGAAGTTAGAAAG+TGG | 0.545673 | 2_4:+28885332 | None:intergenic |
| TGATGTGTCTGACTTGTCGC+CGG | 0.546235 | 2_4:+28891403 | None:intergenic |
| TTTGAGAGGAATAAGGAAGG+AGG | 0.546725 | 2_4:+28891379 | None:intergenic |
| TACTTAAACAGGTGAAAGGA+AGG | 0.547143 | 2_4:-28890130 | Msa0324020:intron |
| CTGTACACTCATGTTTCTCT+CGG | 0.548231 | 2_4:-28888163 | Msa0324020:CDS |
| GGATTAACTACTTACTCCCA+AGG | 0.549154 | 2_4:+28884437 | None:intergenic |
| GAAGGAGCTCTAGTGTTTGT+CGG | 0.549776 | 2_4:+28885659 | None:intergenic |
| TTGGTTTCTATACCGCCTGT+TGG | 0.549931 | 2_4:-28890069 | Msa0324020:CDS |
| ACCAGGGAAGATTGAACTTG+AGG | 0.550724 | 2_4:+28886798 | None:intergenic |
| CGGTATAGAAACCAATGGCC+CGG | 0.553349 | 2_4:+28890077 | None:intergenic |
| GCATTTGACGAAAGCATGGA+TGG | 0.554720 | 2_4:+28886697 | None:intergenic |
| AGTTGAGGCTGTTGTTGCTG+TGG | 0.556528 | 2_4:+28886403 | None:intergenic |
| CCGAAGTTCCCGAAGCAACC+AGG | 0.557513 | 2_4:-28887480 | Msa0324020:CDS |
| TAGAAAGTGGGAAGTTCTGG+TGG | 0.558367 | 2_4:+28885345 | None:intergenic |
| GCTTCTTCTGGAACATCGTA+CGG | 0.558991 | 2_4:-28885386 | Msa0324020:CDS |
| TGCTGAGACCACGAGGCCGG+GGG | 0.559962 | 2_4:+28886544 | None:intergenic |
| TACAGATCAACTTGGATGGA+AGG | 0.560163 | 2_4:+28889880 | None:intergenic |
| TCTGTACTTAAACAGGTGAA+AGG | 0.561215 | 2_4:-28890134 | Msa0324020:intron |
| GATGTGTCTGACTTGTCGCC+GGG | 0.561267 | 2_4:+28891404 | None:intergenic |
| ATTATTCAAAACTCCAGTAT+CGG | 0.561822 | 2_4:+28885061 | None:intergenic |
| ACGAATGCGAACATATACTA+AGG | 0.562827 | 2_4:-28885015 | Msa0324020:intron |
| GATGGCGAAGTTGAGCATGA+TGG | 0.566366 | 2_4:+28885614 | None:intergenic |
| GTATTCTGGAGATGGTTCAC+AGG | 0.570134 | 2_4:+28885692 | None:intergenic |
| GATCAGGTGTTAATCCATCA+AGG | 0.570688 | 2_4:+28885258 | None:intergenic |
| GATCAGAAAGTGGCAATGCA+TGG | 0.571118 | 2_4:-28883929 | Msa0324020:CDS |
| AGGTTTGAGAGGAATAAGGA+AGG | 0.572287 | 2_4:+28891376 | None:intergenic |
| ACAACAAATGAGCTTGGAAG+GGG | 0.572389 | 2_4:-28883994 | Msa0324020:CDS |
| TTGATGTCACCCGTTACAAA+GGG | 0.572737 | 2_4:-28884589 | Msa0324020:CDS |
| AGCTCGGTTTCAATGTCTCT+AGG | 0.572750 | 2_4:+28885167 | None:intergenic |
| ATTGATGTCACCCGTTACAA+AGG | 0.573953 | 2_4:-28884590 | Msa0324020:CDS |
| TGGAGATGAACTCGGCATGA+AGG | 0.577241 | 2_4:-28886824 | Msa0324020:CDS |
| CCATGGCTTGGAGATGAACT+CGG | 0.577481 | 2_4:-28886832 | Msa0324020:CDS |
| GTCTGACAGTTATTAGTCGA+TGG | 0.577604 | 2_4:+28885596 | None:intergenic |
| TGAGACATTTGAGGTTGTTG+TGG | 0.577697 | 2_4:+28886025 | None:intergenic |
| AGAAAGTGGCAATGCATGGA+GGG | 0.580340 | 2_4:-28883925 | Msa0324020:CDS |
| GGAAGTTCAGTATCTTGGAT+GGG | 0.581180 | 2_4:+28886647 | None:intergenic |
| GAAGCTGAGACTGCAAAAGT+GGG | 0.583453 | 2_4:+28885855 | None:intergenic |
| TGAGGTACAACAAATGAGCT+TGG | 0.583754 | 2_4:-28884000 | Msa0324020:CDS |
| CATTGCATTTGACGAAAGCA+TGG | 0.585079 | 2_4:+28886693 | None:intergenic |
| CAGCATCAGCCCCAACAGCT+CGG | 0.585593 | 2_4:-28885791 | Msa0324020:CDS |
| CTGTTGCTGAAGCTGGGAGT+AGG | 0.586514 | 2_4:+28886252 | None:intergenic |
| GTTCATACATAGCTGCATCC+GGG | 0.586528 | 2_4:-28883718 | Msa0324020:three_prime_UTR |
| TGACTGGAAACTAGTGTATG+TGG | 0.586544 | 2_4:-28884495 | Msa0324020:CDS |
| GGATGGGACGAATCAACAGC+TGG | 0.587049 | 2_4:-28887585 | Msa0324020:CDS |
| GGCATTTGCTGGCTTTGTTG+CGG | 0.587376 | 2_4:+28885830 | None:intergenic |
| GCTTGTAGTGGATCAGAAAG+TGG | 0.588775 | 2_4:-28883939 | Msa0324020:CDS |
| CCCAAATTGAAACTCTACTT+GGG | 0.589480 | 2_4:+28887556 | None:intergenic |
| TGCTGGGACATAGGCTGCTG+AGG | 0.589739 | 2_4:+28885809 | None:intergenic |
| GCAACCAGCACTATCTTCAT+CGG | 0.591547 | 2_4:-28888422 | Msa0324020:CDS |
| AAGAACCACAAAATTTACAA+TGG | 0.591993 | 2_4:+28883439 | None:intergenic |
| GAGTAACTGTTGCTGAAGCT+GGG | 0.592862 | 2_4:+28886246 | None:intergenic |
| GCAATGCTGGCTTCAGACAT+GGG | 0.593293 | 2_4:-28889044 | Msa0324020:CDS |
| GTGAAGCATACAGATCAACT+TGG | 0.597140 | 2_4:+28889872 | None:intergenic |
| AGCATACAGATCAACTTGGA+TGG | 0.599868 | 2_4:+28889876 | None:intergenic |
| CCTGATCCTTTGCTCTCAAG+AGG | 0.601288 | 2_4:-28885242 | Msa0324020:CDS |
| AACCACGAATAATCTGATGC+AGG | 0.601852 | 2_4:-28885510 | Msa0324020:CDS |
| GCGTTGTTTCCGAGCTGTTG+GGG | 0.602711 | 2_4:+28885782 | None:intergenic |
| GAATTGCGAGTCTTGTGGTA+AGG | 0.603601 | 2_4:+28886159 | None:intergenic |
| AACAATCTGGTCTCTTACAG+CGG | 0.603796 | 2_4:-28886117 | Msa0324020:CDS |
| ATCACCAATCAAGCTTGTAG+TGG | 0.604847 | 2_4:-28883951 | Msa0324020:CDS |
| TCATACCCTCTTGAGAGCAA+AGG | 0.604859 | 2_4:+28885236 | None:intergenic |
| TGTTGCATACACACCAGAGG+TGG | 0.605201 | 2_4:+28888909 | None:intergenic |
| CCGAGTTCATCTCCAAGCCA+TGG | 0.605934 | 2_4:+28886832 | None:intergenic |
| CTTTCGTCAAATGCAATGCA+TGG | 0.609029 | 2_4:-28886688 | Msa0324020:CDS |
| TGCTGGAATTGCGAGTCTTG+TGG | 0.609397 | 2_4:+28886154 | None:intergenic |
| AATATCAGCAGTGGACAGCT+CGG | 0.611087 | 2_4:+28885151 | None:intergenic |
| CTGATCCTTTGCTCTCAAGA+GGG | 0.612026 | 2_4:-28885241 | Msa0324020:CDS |
| AATCAACCAGACACATTTGG+AGG | 0.613323 | 2_4:-28885548 | Msa0324020:CDS |
| ACTTGTTCACTATGTCCTTG+AGG | 0.614169 | 2_4:+28890027 | None:intergenic |
| GATATATGGGGACAATCACT+GGG | 0.614774 | 2_4:-28888093 | Msa0324020:CDS |
| ACAACTGCAACTGTTGCTGT+TGG | 0.616365 | 2_4:+28885978 | None:intergenic |
| CGGCTTCTCACATAAAGCAA+AGG | 0.618823 | 2_4:-28891477 | Msa0324020:five_prime_UTR |
| ACAAAGGGTATGAAGAACTC+CGG | 0.619258 | 2_4:-28884574 | Msa0324020:CDS |
| GGATTCTGTTGAGTCAGTTG+AGG | 0.619877 | 2_4:+28886388 | None:intergenic |
| CAGAGCAAACATGAATTACA+CGG | 0.620363 | 2_4:-28885464 | Msa0324020:CDS |
| TACAACAAATGAGCTTGGAA+GGG | 0.620674 | 2_4:-28883995 | Msa0324020:CDS |
| TCTCCATCTGTAAAAGCAGA+AGG | 0.620792 | 2_4:+28885641 | None:intergenic |
| CCATGTAGAAGTTAGAAAGT+GGG | 0.621590 | 2_4:+28885333 | None:intergenic |
| GCAACTATTTCCTGAGCTGG+CGG | 0.621994 | 2_4:+28888799 | None:intergenic |
| CAAAGAAACAAAGACAAGCA+TGG | 0.623371 | 2_4:+28891529 | None:intergenic |
| TGGATTAGAGAGCGCAGCAG+GGG | 0.632749 | 2_4:+28886621 | None:intergenic |
| ATTGTACTAAACTCAAACCA+GGG | 0.633466 | 2_4:+28886782 | None:intergenic |
| ATCAACCAGACACATTTGGA+GGG | 0.635944 | 2_4:-28885547 | Msa0324020:CDS |
| AAAGTTAAACAAGATTAACA+TGG | 0.637310 | 2_4:+28891636 | None:intergenic |
| TATCGGCATTCTTGCTGCTG+CGG | 0.637519 | 2_4:-28888377 | Msa0324020:CDS |
| GCTAGTGACACTAGCACTCA+CGG | 0.638289 | 2_4:-28888972 | Msa0324020:CDS |
| CATTCAAGAGAGCTATGCCA+TGG | 0.640043 | 2_4:-28886849 | Msa0324020:CDS |
| CTGTGAACTAATATCAGCAG+TGG | 0.640844 | 2_4:+28885142 | None:intergenic |
| AGCTGCTGCGAATGCATGAG+AGG | 0.643079 | 2_4:+28885716 | None:intergenic |
| ATTACCGATGAAGATAGTGC+TGG | 0.645702 | 2_4:+28888418 | None:intergenic |
| CTTTCTCCTACAGTATGACA+AGG | 0.647300 | 2_4:-28889069 | Msa0324020:intron |
| TGCAGCATCTATGCAAAAGG+AGG | 0.648089 | 2_4:-28889928 | Msa0324020:CDS |
| AACTTGTTGTCTAATTATGG+CGG | 0.651391 | 2_4:-28885194 | Msa0324020:CDS |
| TATTCTGGAGATGGTTCACA+GGG | 0.651795 | 2_4:+28885693 | None:intergenic |
| GAAAAGTGGACCTACATGCA+GGG | 0.656104 | 2_4:+28889842 | None:intergenic |
| CCCGACAAGCAAAAGCACAA+AGG | 0.660790 | 2_4:-28885431 | Msa0324020:CDS |
| GATTAACTACTTACTCCCAA+GGG | 0.661485 | 2_4:+28884438 | None:intergenic |
| CAGGAGTACGCAGATATATG+GGG | 0.663460 | 2_4:-28888105 | Msa0324020:CDS |
| CATCTGTGCATAGACCTCGT+CGG | 0.663742 | 2_4:+28889219 | None:intergenic |
| GTTGCATACACACCAGAGGT+GGG | 0.666086 | 2_4:+28888910 | None:intergenic |
| CAGAAAGTGGCAATGCATGG+AGG | 0.667231 | 2_4:-28883926 | Msa0324020:CDS |
| TGTGGAATACTTGAGGAACA+AGG | 0.668437 | 2_4:-28890919 | Msa0324020:five_prime_UTR |
| ACAGCTAGAAGATCCTGTAA+GGG | 0.669799 | 2_4:-28884519 | Msa0324020:CDS |
| AAAGATACTATCATCTGCTG+AGG | 0.674256 | 2_4:-28884018 | Msa0324020:CDS |
| TTGGATTAGAGAGCGCAGCA+GGG | 0.676074 | 2_4:+28886620 | None:intergenic |
| TTGCTGTTGCTGAGACCACG+AGG | 0.677068 | 2_4:+28886537 | None:intergenic |
| TAAAAGCCCTGATTGAGCAG+CGG | 0.680480 | 2_4:+28886723 | None:intergenic |
| TGGCGAAGTTGAGCATGATG+GGG | 0.681539 | 2_4:+28885616 | None:intergenic |
| AAGCTGAGACTGCAAAAGTG+GGG | 0.682110 | 2_4:+28885856 | None:intergenic |
| ACAGGCGGTATAGAAACCAA+TGG | 0.690042 | 2_4:+28890072 | None:intergenic |
| TTTGACGAAAGCATGGATGG+AGG | 0.692176 | 2_4:+28886700 | None:intergenic |
| CTTGAGGAAAGTAAACAACA+AGG | 0.693762 | 2_4:+28890043 | None:intergenic |
| GGCTGACCCTGAAACCGACG+AGG | 0.693943 | 2_4:-28889233 | Msa0324020:CDS |
| TCACCATTAAAAGCAGTGTG+CGG | 0.693988 | 2_4:+28883688 | None:intergenic |
| ACAACAAGGCTTCCAACAGG+CGG | 0.694325 | 2_4:+28890057 | None:intergenic |
| AATGGAATCACAAATTCACA+GGG | 0.698703 | 2_4:+28888205 | None:intergenic |
| ACATTTAGACATATTTACCG+CGG | 0.734735 | 2_4:-28888751 | Msa0324020:intron |
| ATGGAATCACAAATTCACAG+GGG | 0.801265 | 2_4:+28888206 | None:intergenic |
| AGTGACACTAGCACTCACGG+CGG | 0.887681 | 2_4:-28888969 | Msa0324020:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTCATTGTTTTTTT+TGG | - | chr2_4:28883828-28883847 | Msa0324020:three_prime_UTR | 10.0% |
| !!! | TTTTTTTCATTGTTTTTTTT+GGG | - | chr2_4:28883829-28883848 | Msa0324020:three_prime_UTR | 10.0% |
| !! | TTTGATAAGATATAAATTAT+TGG | + | chr2_4:28885959-28885978 | None:intergenic | 10.0% |
| !! | TTAAAGAAAAAATAATACTT+TGG | + | chr2_4:28887927-28887946 | None:intergenic | 10.0% |
| !! | AATATAAAGATAAAATAGAA+TGG | + | chr2_4:28890969-28890988 | None:intergenic | 10.0% |
| !! | ATTAGTATTGTTTATGTTTA+TGG | + | chr2_4:28883455-28883474 | None:intergenic | 15.0% |
| !! | TCTTCTATATATTATGATAA+AGG | - | chr2_4:28884468-28884487 | Msa0324020:CDS | 15.0% |
| !! | CTTCTATATATTATGATAAA+GGG | - | chr2_4:28884469-28884488 | Msa0324020:CDS | 15.0% |
| !!! | TTTTTTTTCATATTCTGTTA+TGG | - | chr2_4:28884817-28884836 | Msa0324020:intron | 15.0% |
| !!! | TAATTAAGTTATTTTCTGAA+TGG | - | chr2_4:28885671-28885690 | Msa0324020:CDS | 15.0% |
| !!! | AATTAAGTTATTTTCTGAAT+GGG | - | chr2_4:28885672-28885691 | Msa0324020:CDS | 15.0% |
| !!! | TTTTTATTTATTTTTGGATC+AGG | - | chr2_4:28885808-28885827 | Msa0324020:CDS | 15.0% |
| !!! | TAAGATATAAATTATTGGTT+CGG | + | chr2_4:28885954-28885973 | None:intergenic | 15.0% |
| !! | GGATTATAAAATATAGTAAA+TGG | + | chr2_4:28886734-28886753 | None:intergenic | 15.0% |
| !!! | TTACTATATTTTATAATCCA+AGG | - | chr2_4:28886735-28886754 | Msa0324020:CDS | 15.0% |
| !!! | GTAATGTTTTTAATTTTGAT+AGG | - | chr2_4:28887452-28887471 | Msa0324020:intron | 15.0% |
| !! | AAAAAAAGTTATTATTGCAT+TGG | + | chr2_4:28887862-28887881 | None:intergenic | 15.0% |
| !! | ATTACTCATTGATAAATTTA+TGG | - | chr2_4:28890076-28890095 | Msa0324020:CDS | 15.0% |
| !! | TTTGTATAAACAACTTAATT+AGG | - | chr2_4:28890119-28890138 | Msa0324020:CDS | 15.0% |
| !!! | GAATATTTTTAGAAAGTAAA+CGG | - | chr2_4:28890936-28890955 | Msa0324020:five_prime_UTR | 15.0% |
| !!! | AATATTTTTAGAAAGTAAAC+GGG | - | chr2_4:28890937-28890956 | Msa0324020:five_prime_UTR | 15.0% |
| !! | AAAGTTAAACAAGATTAACA+TGG | + | chr2_4:28883429-28883448 | None:intergenic | 20.0% |
| !!! | TCATTCATATTTTGTCTTAA+AGG | - | chr2_4:28883772-28883791 | Msa0324020:three_prime_UTR | 20.0% |
| !!! | AGTATAAGATTTTGATATTG+TGG | - | chr2_4:28884125-28884144 | Msa0324020:intron | 20.0% |
| !! | TTCAAAAAAGGTTCAAAAAT+TGG | + | chr2_4:28884194-28884213 | None:intergenic | 20.0% |
| !!! | AATTTTTGAACCTTTTTTGA+AGG | - | chr2_4:28884193-28884212 | Msa0324020:intron | 20.0% |
| !! | TAATAATGAACCTTCAAAAA+AGG | + | chr2_4:28884206-28884225 | None:intergenic | 20.0% |
| !! | AAAAAGTGACAAAAAGATTA+GGG | + | chr2_4:28884502-28884521 | None:intergenic | 20.0% |
| !! | TAAAAAGTGACAAAAAGATT+AGG | + | chr2_4:28884503-28884522 | None:intergenic | 20.0% |
| !!! | AACTCAACTTTTTATAAGAT+TGG | + | chr2_4:28884864-28884883 | None:intergenic | 20.0% |
| !! | ACAAAGAAATAATATAGCAT+TGG | + | chr2_4:28885067-28885086 | None:intergenic | 20.0% |
| !!! | GCTATATTATTTCTTTGTTT+TGG | - | chr2_4:28885069-28885088 | Msa0324020:CDS | 20.0% |
| !!! | TTTTCATATAATCTATAAGC+TGG | + | chr2_4:28885601-28885620 | None:intergenic | 20.0% |
| !!! | ATTAAGTTATTTTCTGAATG+GGG | - | chr2_4:28885673-28885692 | Msa0324020:CDS | 20.0% |
| !!! | AAGATATAAATTATTGGTTC+GGG | + | chr2_4:28885953-28885972 | None:intergenic | 20.0% |
| !! | TTATAAAATTGCATCAACAT+TGG | - | chr2_4:28886392-28886411 | Msa0324020:CDS | 20.0% |
| !!! | TGTTTTTAATTTTGATAGGT+TGG | - | chr2_4:28887456-28887475 | Msa0324020:intron | 20.0% |
| !! | AAAATATGAACAAATTAAGG+AGG | + | chr2_4:28887628-28887647 | None:intergenic | 20.0% |
| !! | GCAAAAATATGAACAAATTA+AGG | + | chr2_4:28887631-28887650 | None:intergenic | 20.0% |
| !! | AAGAATTGTCTATATAAAGA+AGG | + | chr2_4:28887695-28887714 | None:intergenic | 20.0% |
| !! | AAATTATCCTAATCAACTAT+TGG | + | chr2_4:28887961-28887980 | None:intergenic | 20.0% |
| !! | AATAGTTGATTAGGATAATT+TGG | - | chr2_4:28887960-28887979 | Msa0324020:intron | 20.0% |
| !! | CAAAATACAACTATGAATAA+CGG | - | chr2_4:28888737-28888756 | Msa0324020:intron | 20.0% |
| !!! | AAAATATGTAAAGAAGCATT+AGG | + | chr2_4:28890418-28890437 | None:intergenic | 20.0% |
| ! | AAACAACTCATTAAAGATGT+AGG | + | chr2_4:28883509-28883528 | None:intergenic | 25.0% |
| !! | TTTTTGAACTTGAACTTGAT+TGG | - | chr2_4:28883749-28883768 | Msa0324020:three_prime_UTR | 25.0% |
| !!! | TTCCTTTTGTCTTTTTTTGT+TGG | - | chr2_4:28883798-28883817 | Msa0324020:three_prime_UTR | 25.0% |
| !!! | TCCTTTTGTCTTTTTTTGTT+GGG | - | chr2_4:28883799-28883818 | Msa0324020:three_prime_UTR | 25.0% |
| ! | ACTAGAACAAGTGAAATTAA+GGG | + | chr2_4:28883901-28883920 | None:intergenic | 25.0% |
| ! | AACTAGAACAAGTGAAATTA+AGG | + | chr2_4:28883902-28883921 | None:intergenic | 25.0% |
| !! | AAACTTTTAGTGGCATTTTT+TGG | - | chr2_4:28883981-28884000 | Msa0324020:CDS | 25.0% |
| !!! | AACTTTTAGTGGCATTTTTT+GGG | - | chr2_4:28883982-28884001 | Msa0324020:CDS | 25.0% |
| !!! | TGGTTATTTTGCTATGTAAT+TGG | - | chr2_4:28884023-28884042 | Msa0324020:CDS | 25.0% |
| ! | TATGTAATTGGATAACTTTG+TGG | - | chr2_4:28884035-28884054 | Msa0324020:CDS | 25.0% |
| !!! | AGGTTCATTATTACTTTTTG+AGG | - | chr2_4:28884213-28884232 | Msa0324020:intron | 25.0% |
| !!! | GGTTCATTATTACTTTTTGA+GGG | - | chr2_4:28884214-28884233 | Msa0324020:intron | 25.0% |
| ! | TGTTAAGAGATTAATGAAAC+AGG | + | chr2_4:28884342-28884361 | None:intergenic | 25.0% |
| !! | TCTGAGAATGATATCTTTTA+AGG | - | chr2_4:28884369-28884388 | Msa0324020:intron | 25.0% |
| ! | AGATCCAATAAATATGAGTA+AGG | - | chr2_4:28884439-28884458 | Msa0324020:intron | 25.0% |
| ! | GATCCAATAAATATGAGTAA+GGG | - | chr2_4:28884440-28884459 | Msa0324020:intron | 25.0% |
| ! | ATCCAATAAATATGAGTAAG+GGG | - | chr2_4:28884441-28884460 | Msa0324020:intron | 25.0% |
| !!! | TGTCACTTTTTACTCTTTTA+TGG | - | chr2_4:28884511-28884530 | Msa0324020:CDS | 25.0% |
| ! | GTAAATGTGTAACAGATTTA+TGG | - | chr2_4:28884581-28884600 | Msa0324020:CDS | 25.0% |
| ! | TTGTTAAACAACAGATATTG+TGG | + | chr2_4:28884761-28884780 | None:intergenic | 25.0% |
| !! | TTCTAACCACAATAACTTTT+AGG | - | chr2_4:28885110-28885129 | Msa0324020:CDS | 25.0% |
| ! | AAACAAATCTCTAATCATTC+AGG | + | chr2_4:28885473-28885492 | None:intergenic | 25.0% |
| ! | AATCGCTAAATGAAAACAAA+AGG | + | chr2_4:28885761-28885780 | None:intergenic | 25.0% |
| !! | TACTTTATTTACAGGTTGAA+GGG | + | chr2_4:28885870-28885889 | None:intergenic | 25.0% |
| !!! | AGATATAAATTATTGGTTCG+GGG | + | chr2_4:28885952-28885971 | None:intergenic | 25.0% |
| !! | TGCAACATTTTCATTTACTA+TGG | - | chr2_4:28886169-28886188 | Msa0324020:CDS | 25.0% |
| ! | GGATCAAGGAAAATTAAAAT+AGG | + | chr2_4:28886351-28886370 | None:intergenic | 25.0% |
| ! | AACAAACGACAATATATTCA+AGG | + | chr2_4:28886372-28886391 | None:intergenic | 25.0% |
| !!! | TCTTTTTTTTGACGAATCAT+CGG | - | chr2_4:28886523-28886542 | Msa0324020:CDS | 25.0% |
| !! | TTATAATCCAAGGTACTATT+TGG | - | chr2_4:28886745-28886764 | Msa0324020:CDS | 25.0% |
| !!! | AATTTTTTTTGCTTCTGCTT+AGG | + | chr2_4:28887099-28887118 | None:intergenic | 25.0% |
| !! | GTTAGTTTCATAGAACAAAT+TGG | + | chr2_4:28887137-28887156 | None:intergenic | 25.0% |
| ! | AACTGATTGAATGTTCAATT+AGG | + | chr2_4:28887280-28887299 | None:intergenic | 25.0% |
| !!! | TTTAATTTTGATAGGTTGGA+TGG | - | chr2_4:28887460-28887479 | Msa0324020:intron | 25.0% |
| !!! | TTAATTTTGATAGGTTGGAT+GGG | - | chr2_4:28887461-28887480 | Msa0324020:intron | 25.0% |
| ! | GGAAAGCAATAAAAAATTCT+AGG | + | chr2_4:28887653-28887672 | None:intergenic | 25.0% |
| !! | ATTGTTGTCATTTCATAATG+AGG | + | chr2_4:28887730-28887749 | None:intergenic | 25.0% |
| !!! | AAACGACATTCATTTTGAAA+CGG | + | chr2_4:28887797-28887816 | None:intergenic | 25.0% |
| ! | AAACAAACCAATAGTTGATT+AGG | - | chr2_4:28887951-28887970 | Msa0324020:intron | 25.0% |
| ! | GGTTTATTAAATTGAAGACT+TGG | + | chr2_4:28888464-28888483 | None:intergenic | 25.0% |
| !!! | TTCATAGTTGTATTTTGACA+CGG | + | chr2_4:28888734-28888753 | None:intergenic | 25.0% |
| !!! | CAAAACTTGTTGTCTAATTA+TGG | - | chr2_4:28889865-28889884 | Msa0324020:CDS | 25.0% |
| ! | ATTATTCAAAACTCCAGTAT+CGG | + | chr2_4:28890004-28890023 | None:intergenic | 25.0% |
| !!! | ATACTGGAGTTTTGAATAAT+GGG | - | chr2_4:28890004-28890023 | Msa0324020:intron | 25.0% |
| ! | ATTTATGGATCTATGAGTTT+AGG | - | chr2_4:28890091-28890110 | Msa0324020:CDS | 25.0% |
| ! | TGTTTACCTTAAGCATATAA+GGG | - | chr2_4:28890142-28890161 | Msa0324020:intron | 25.0% |
| ! | GTCATGATAGTATATTTACA+TGG | - | chr2_4:28890373-28890392 | Msa0324020:intron | 25.0% |
| !!! | TGCTTCTTTACATATTTTGA+AGG | - | chr2_4:28890420-28890439 | Msa0324020:intron | 25.0% |
| !!! | ATTTTGAAGGTTCAAAAATG+TGG | - | chr2_4:28890433-28890452 | Msa0324020:intron | 25.0% |
| ! | GTTGAAGTGAAAATAAAAAC+AGG | + | chr2_4:28890702-28890721 | None:intergenic | 25.0% |
| !! | TCATTTTCTCCTACAATTTT+TGG | - | chr2_4:28890761-28890780 | Msa0324020:intron | 25.0% |
| ! | GTTTAGTTAAATTGCTAACA+AGG | + | chr2_4:28890893-28890912 | None:intergenic | 25.0% |
| ! | ATGATAGTATCTTTATGCTT+TGG | + | chr2_4:28891038-28891057 | None:intergenic | 25.0% |
| ! | ATTCAACTTGTACACATTTA+GGG | - | chr2_4:28891228-28891247 | Msa0324020:intron | 25.0% |
| !! | CAAGAAGAAGAAATTTTCAA+GGG | + | chr2_4:28891275-28891294 | None:intergenic | 25.0% |
| !! | GAAGTAACATTTTGTAGTAA+AGG | + | chr2_4:28891439-28891458 | None:intergenic | 25.0% |
| !!! | CATTTTTTTCCACTTCTTTT+TGG | - | chr2_4:28891515-28891534 | Msa0324020:five_prime_UTR | 25.0% |
| !! | TTACACCATTGTAAATTTTG+TGG | - | chr2_4:28891618-28891637 | Msa0324020:five_prime_UTR | 25.0% |
| ! | AAGAACCACAAAATTTACAA+TGG | + | chr2_4:28891626-28891645 | None:intergenic | 25.0% |
| ! | TTATGCAATTGAGTGATAAT+TGG | - | chr2_4:28891663-28891682 | Msa0324020:five_prime_UTR | 25.0% |
| TTCAGCTCATATTTCAATGT+CGG | - | chr2_4:28883565-28883584 | Msa0324020:three_prime_UTR | 30.0% | |
| AAAAAGCAGAAGCAGAAAAT+GGG | + | chr2_4:28883732-28883751 | None:intergenic | 30.0% | |
| AAAAAAGCAGAAGCAGAAAA+TGG | + | chr2_4:28883733-28883752 | None:intergenic | 30.0% | |
| ACCCAACAAAAAAAGACAAA+AGG | + | chr2_4:28883803-28883822 | None:intergenic | 30.0% | |
| !!! | TTTTGCAGATTTTAGCTTGT+TGG | - | chr2_4:28883872-28883891 | Msa0324020:exon | 30.0% |
| !!! | TTTGCAGATTTTAGCTTGTT+GGG | - | chr2_4:28883873-28883892 | Msa0324020:exon | 30.0% |
| !! | ACTTTTAGTGGCATTTTTTG+GGG | - | chr2_4:28883983-28884002 | Msa0324020:CDS | 30.0% |
| ACTTTGTGGTAAGAATCAAA+AGG | - | chr2_4:28884049-28884068 | Msa0324020:intron | 30.0% | |
| CTTTGTGGTAAGAATCAAAA+GGG | - | chr2_4:28884050-28884069 | Msa0324020:intron | 30.0% | |
| !! | ATCAAAAGGGTTATTTTGTG+AGG | - | chr2_4:28884063-28884082 | Msa0324020:intron | 30.0% |
| TTGATATTGTGGAATACTTG+AGG | - | chr2_4:28884136-28884155 | Msa0324020:intron | 30.0% | |
| !! | ACTTTTTGAGGGTATAATGA+AGG | - | chr2_4:28884225-28884244 | Msa0324020:intron | 30.0% |
| AACCCCTTACTCATATTTAT+TGG | + | chr2_4:28884446-28884465 | None:intergenic | 30.0% | |
| !!! | CAGAAAAGTTGTAGTTTTGA+AGG | - | chr2_4:28884537-28884556 | Msa0324020:CDS | 30.0% |
| GTGAGAAGGTGATTAAATTA+AGG | + | chr2_4:28884670-28884689 | None:intergenic | 30.0% | |
| ! | TTGTGGATTGCATAAAATAG+TGG | - | chr2_4:28884699-28884718 | Msa0324020:intron | 30.0% |
| CACTTTGTAATAGCGTATTT+CGG | - | chr2_4:28884781-28884800 | Msa0324020:intron | 30.0% | |
| CTTGATTTCTGTACTTAAAC+AGG | - | chr2_4:28884921-28884940 | Msa0324020:intron | 30.0% | |
| GATCGAAAAAACTTCATAGA+AGG | + | chr2_4:28885318-28885337 | None:intergenic | 30.0% | |
| !!! | CTATGAAGTTTTTTCGATCT+TGG | - | chr2_4:28885319-28885338 | Msa0324020:CDS | 30.0% |
| ! | TGTTTACTCATTTTCCTTCT+TGG | - | chr2_4:28885418-28885437 | Msa0324020:CDS | 30.0% |
| !!! | GCTGGTTTTATAAGTTATCT+TGG | + | chr2_4:28885583-28885602 | None:intergenic | 30.0% |
| ! | CTACTTTATTTACAGGTTGA+AGG | + | chr2_4:28885871-28885890 | None:intergenic | 30.0% |
| CTTCAACCTGTAAATAAAGT+AGG | - | chr2_4:28885869-28885888 | Msa0324020:CDS | 30.0% | |
| CGACATGTTATTAGACTAAA+CGG | + | chr2_4:28885899-28885918 | None:intergenic | 30.0% | |
| !! | GATATAAATTATTGGTTCGG+GGG | + | chr2_4:28885951-28885970 | None:intergenic | 30.0% |
| ! | GTTTTGCAAAAGAATTCTGA+CGG | + | chr2_4:28886063-28886082 | None:intergenic | 30.0% |
| TTACCAGAAATGTCTTTGAT+AGG | - | chr2_4:28886226-28886245 | Msa0324020:CDS | 30.0% | |
| TGTAGTGTCATGTAAATCTT+TGG | + | chr2_4:28886288-28886307 | None:intergenic | 30.0% | |
| AAGATTTACATGACACTACA+TGG | - | chr2_4:28886288-28886307 | Msa0324020:CDS | 30.0% | |
| ACATTTAGACATATTTACCG+CGG | - | chr2_4:28886311-28886330 | Msa0324020:CDS | 30.0% | |
| GACAATATATTCAAGGATCA+AGG | + | chr2_4:28886365-28886384 | None:intergenic | 30.0% | |
| ! | GAGATTCTGTTCTTTTTATC+AGG | - | chr2_4:28886488-28886507 | Msa0324020:CDS | 30.0% |
| ! | TCTGTTCTTTTTATCAGGTA+AGG | - | chr2_4:28886493-28886512 | Msa0324020:CDS | 30.0% |
| CCTGTTAAAATGACATATGT+CGG | + | chr2_4:28886831-28886850 | None:intergenic | 30.0% | |
| AATGGAATCACAAATTCACA+GGG | + | chr2_4:28886860-28886879 | None:intergenic | 30.0% | |
| !! | GTACAGAGCTTTATTATACT+TGG | + | chr2_4:28886885-28886904 | None:intergenic | 30.0% |
| ! | TGTTAGTTTCATCAAGAACT+AGG | - | chr2_4:28887058-28887077 | Msa0324020:intron | 30.0% |
| TTGAATGTTCAATTAGGTGT+CGG | + | chr2_4:28887274-28887293 | None:intergenic | 30.0% | |
| ! | GGCAGATAATTGATAATCAA+TGG | + | chr2_4:28887674-28887693 | None:intergenic | 30.0% |
| GTCATTTCATAATGAGGAAA+TGG | + | chr2_4:28887724-28887743 | None:intergenic | 30.0% | |
| ! | GTAACATAGTAGTAATGGAA+GGG | + | chr2_4:28887897-28887916 | None:intergenic | 30.0% |
| ! | TGTAACATAGTAGTAATGGA+AGG | + | chr2_4:28887898-28887917 | None:intergenic | 30.0% |
| GTAGTGTAACATAGTAGTAA+TGG | + | chr2_4:28887902-28887921 | None:intergenic | 30.0% | |
| ATTGCACACATATTAAGGAA+TGG | + | chr2_4:28888017-28888036 | None:intergenic | 30.0% | |
| TTCCTTAATATGTGTGCAAT+TGG | - | chr2_4:28888017-28888036 | Msa0324020:intron | 30.0% | |
| ATCCAATTGCACACATATTA+AGG | + | chr2_4:28888022-28888041 | None:intergenic | 30.0% | |
| ATTGTACTAAACTCAAACCA+GGG | + | chr2_4:28888283-28888302 | None:intergenic | 30.0% | |
| ! | AGCTGATTGGAAATTTTGTT+GGG | + | chr2_4:28888858-28888877 | None:intergenic | 30.0% |
| !! | ATTTTTGTGTATTCTGGAGA+TGG | + | chr2_4:28889381-28889400 | None:intergenic | 30.0% |
| GCAAATGGTAAATTACTTCT+AGG | + | chr2_4:28889778-28889797 | None:intergenic | 30.0% | |
| !! | AACTTGTTGTCTAATTATGG+CGG | - | chr2_4:28889868-28889887 | Msa0324020:CDS | 30.0% |
| !!! | GATACTGGAGTTTTGAATAA+TGG | - | chr2_4:28890003-28890022 | Msa0324020:intron | 30.0% |
| GTGTTTACCTTAAGCATATA+AGG | - | chr2_4:28890141-28890160 | Msa0324020:intron | 30.0% | |
| CAGTGATATGAACAAGAAAT+TGG | + | chr2_4:28890649-28890668 | None:intergenic | 30.0% | |
| CAGGAATCATGAAAAGTAAA+CGG | + | chr2_4:28890683-28890702 | None:intergenic | 30.0% | |
| ! | AAAATGATGATGCGAATAGT+GGG | + | chr2_4:28890748-28890767 | None:intergenic | 30.0% |
| GATCTGTTTCCAAAAATTGT+AGG | + | chr2_4:28890773-28890792 | None:intergenic | 30.0% | |
| ACAATTGTGATAGATTGAAG+TGG | + | chr2_4:28890848-28890867 | None:intergenic | 30.0% | |
| TAGTTAAATTGCTAACAAGG+AGG | + | chr2_4:28890890-28890909 | None:intergenic | 30.0% | |
| CATTCAACTTGTACACATTT+AGG | - | chr2_4:28891227-28891246 | Msa0324020:intron | 30.0% | |
| ! | GCAAGAAGAAGAAATTTTCA+AGG | + | chr2_4:28891276-28891295 | None:intergenic | 30.0% |
| !! | AAGAAAGCATGTTCTAAAGT+AGG | + | chr2_4:28891461-28891480 | None:intergenic | 30.0% |
| TGAAACTTTCCAAAAAGAAG+TGG | + | chr2_4:28891527-28891546 | None:intergenic | 30.0% | |
| CAAAGAAACAAAGACAAGCA+TGG | + | chr2_4:28883536-28883555 | None:intergenic | 35.0% | |
| ! | TTCCTTTTCTTCTGATTTCC+CGG | - | chr2_4:28883640-28883659 | Msa0324020:three_prime_UTR | 35.0% |
| CAAGTAGAAAAAAGCAAAGC+AGG | + | chr2_4:28883709-28883728 | None:intergenic | 35.0% | |
| ! | TTGTTCTAGTTGCAAAGTTG+TGG | - | chr2_4:28883911-28883930 | Msa0324020:CDS | 35.0% |
| ! | AGTTGCAAAGTTGTGGTTTT+TGG | - | chr2_4:28883918-28883937 | Msa0324020:CDS | 35.0% |
| GAAGATTGAAGAAGATTCAG+AGG | - | chr2_4:28883956-28883975 | Msa0324020:CDS | 35.0% | |
| ! | TTCAGAGGTGAAACTTTTAG+TGG | - | chr2_4:28883971-28883990 | Msa0324020:CDS | 35.0% |
| !! | CTTTTAGTGGCATTTTTTGG+GGG | - | chr2_4:28883984-28884003 | Msa0324020:CDS | 35.0% |
| ATAATGAAGGCTCCTTCTAA+TGG | - | chr2_4:28884238-28884257 | Msa0324020:intron | 35.0% | |
| TTAGCCAAGTAACCATTAGA+AGG | + | chr2_4:28884253-28884272 | None:intergenic | 35.0% | |
| AATGGTTACTTGGCTAATTC+TGG | - | chr2_4:28884256-28884275 | Msa0324020:intron | 35.0% | |
| !!! | TGGTGAAGGTGTGTTTTTTA+AGG | - | chr2_4:28884276-28884295 | Msa0324020:intron | 35.0% |
| ATGCAATCCACAATTGACAA+AGG | + | chr2_4:28884692-28884711 | None:intergenic | 35.0% | |
| TCTGTACTTAAACAGGTGAA+AGG | - | chr2_4:28884928-28884947 | Msa0324020:intron | 35.0% | |
| TACTTAAACAGGTGAAAGGA+AGG | - | chr2_4:28884932-28884951 | Msa0324020:intron | 35.0% | |
| ATGCCATAACTCTGAATTGA+TGG | + | chr2_4:28884958-28884977 | None:intergenic | 35.0% | |
| CTTGAGGAAAGTAAACAACA+AGG | + | chr2_4:28885022-28885041 | None:intergenic | 35.0% | |
| !! | CTTGTTGTTTACTTTCCTCA+AGG | - | chr2_4:28885020-28885039 | Msa0324020:CDS | 35.0% |
| CTGCAACCTAAAAGTTATTG+TGG | + | chr2_4:28885119-28885138 | None:intergenic | 35.0% | |
| ! | CTCTAATCATTCAGGTTTCT+TGG | + | chr2_4:28885465-28885484 | None:intergenic | 35.0% |
| AAGTTATCTTGGAGAGCTTA+TGG | + | chr2_4:28885572-28885591 | None:intergenic | 35.0% | |
| ATACTGATATTGTCTCTGCT+AGG | + | chr2_4:28885699-28885718 | None:intergenic | 35.0% | |
| AAAAGAATTCTGACGGTTGT+TGG | + | chr2_4:28886056-28886075 | None:intergenic | 35.0% | |
| AGTCCTATCAAAGACATTTC+TGG | + | chr2_4:28886232-28886251 | None:intergenic | 35.0% | |
| AAAGATGTACATCAACAACG+TGG | + | chr2_4:28886557-28886576 | None:intergenic | 35.0% | |
| ATAGATGCCAAATAGTACCT+TGG | + | chr2_4:28886755-28886774 | None:intergenic | 35.0% | |
| ATCTATTTCCTATGAGAGCA+TGG | - | chr2_4:28886769-28886788 | Msa0324020:CDS | 35.0% | |
| !!! | CCGACATATGTCATTTTAAC+AGG | - | chr2_4:28886828-28886847 | Msa0324020:CDS | 35.0% |
| ATGGAATCACAAATTCACAG+GGG | + | chr2_4:28886859-28886878 | None:intergenic | 35.0% | |
| CAATGGAATCACAAATTCAC+AGG | + | chr2_4:28886861-28886880 | None:intergenic | 35.0% | |
| CTGTGAATTTGTGATTCCAT+TGG | - | chr2_4:28886859-28886878 | Msa0324020:CDS | 35.0% | |
| ! | GCTTTATTATACTTGGCCAA+TGG | + | chr2_4:28886878-28886897 | None:intergenic | 35.0% |
| ATATGTCACAGACACATACA+AGG | + | chr2_4:28887360-28887379 | None:intergenic | 35.0% | |
| ATGTGTCTGTGACATATTCT+AGG | - | chr2_4:28887363-28887382 | Msa0324020:intron | 35.0% | |
| TGACATATTCTAGGTACACT+CGG | - | chr2_4:28887372-28887391 | Msa0324020:intron | 35.0% | |
| ! | ACATATCTACTAGCTTCTTG+AGG | - | chr2_4:28887427-28887446 | Msa0324020:intron | 35.0% |
| CCCAAATTGAAACTCTACTT+GGG | + | chr2_4:28887509-28887528 | None:intergenic | 35.0% | |
| CCCAAGTAGAGTTTCAATTT+GGG | - | chr2_4:28887506-28887525 | Msa0324020:CDS | 35.0% | |
| TCCCAAATTGAAACTCTACT+TGG | + | chr2_4:28887510-28887529 | None:intergenic | 35.0% | |
| ATGTAAAAAGGAGTCACAAC+TGG | + | chr2_4:28887540-28887559 | None:intergenic | 35.0% | |
| !!! | GACATTCATTTTGAAACGGA+GGG | + | chr2_4:28887793-28887812 | None:intergenic | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr2_4:28888043-28888062 | Msa0324020:CDS | 35.0% |
| ! | AGGGAGTAGCATTCTTTTAA+GGG | - | chr2_4:28888066-28888085 | Msa0324020:CDS | 35.0% |
| CATTGTACTAAACTCAAACC+AGG | + | chr2_4:28888284-28888303 | None:intergenic | 35.0% | |
| ! | CTGGTTTGAGTTTAGTACAA+TGG | - | chr2_4:28888282-28888301 | Msa0324020:intron | 35.0% |
| !! | TTGACTTGGTTCGGTAAATT+AGG | + | chr2_4:28888485-28888504 | None:intergenic | 35.0% |
| !! | TGCAATTGATTGACTTGGTT+CGG | + | chr2_4:28888494-28888513 | None:intergenic | 35.0% |
| ACTATGAATAACGGCACAAT+TGG | - | chr2_4:28888746-28888765 | Msa0324020:intron | 35.0% | |
| ! | CAGCTGATTGGAAATTTTGT+TGG | + | chr2_4:28888859-28888878 | None:intergenic | 35.0% |
| CAACAAAATTTCCAATCAGC+TGG | - | chr2_4:28888857-28888876 | Msa0324020:intron | 35.0% | |
| CAAATAGACCAACAACAATC+TGG | - | chr2_4:28888932-28888951 | Msa0324020:CDS | 35.0% | |
| ! | TCGGTGATTTTTGTGTATTC+TGG | + | chr2_4:28889387-28889406 | None:intergenic | 35.0% |
| ! | TGATTTCTTTTCAGAGGGTT+TGG | + | chr2_4:28889499-28889518 | None:intergenic | 35.0% |
| !! | CTGGTTGATTTCTTTTCAGA+GGG | + | chr2_4:28889504-28889523 | None:intergenic | 35.0% |
| !! | TCTGGTTGATTTCTTTTCAG+AGG | + | chr2_4:28889505-28889524 | None:intergenic | 35.0% |
| AGAAATCAACCAGACACATT+TGG | - | chr2_4:28889511-28889530 | Msa0324020:intron | 35.0% | |
| CAGAGCAAACATGAATTACA+CGG | - | chr2_4:28889598-28889617 | Msa0324020:intron | 35.0% | |
| ! | CATGAATTACACGGTGTTAA+AGG | - | chr2_4:28889607-28889626 | Msa0324020:intron | 35.0% |
| AGGTGCAATCAATGATCATA+TGG | - | chr2_4:28889651-28889670 | Msa0324020:intron | 35.0% | |
| CCATGTAGAAGTTAGAAAGT+GGG | + | chr2_4:28889732-28889751 | None:intergenic | 35.0% | |
| TCCATGTAGAAGTTAGAAAG+TGG | + | chr2_4:28889733-28889752 | None:intergenic | 35.0% | |
| CTTTCTAACTTCTACATGGA+TGG | - | chr2_4:28889733-28889752 | Msa0324020:intron | 35.0% | |
| GATATTAGTTCACAGTCGTT+TGG | - | chr2_4:28889928-28889947 | Msa0324020:CDS | 35.0% | |
| !!! | GAGTTTTGAATAATGGGCTA+TGG | - | chr2_4:28890010-28890029 | Msa0324020:intron | 35.0% |
| ACGAATGCGAACATATACTA+AGG | - | chr2_4:28890047-28890066 | Msa0324020:CDS | 35.0% | |
| !! | GCTGTTTTCATGATCTATTC+TGG | - | chr2_4:28890227-28890246 | Msa0324020:intron | 35.0% |
| !! | TCTATTCTGGAGAGCTTTTA+TGG | - | chr2_4:28890240-28890259 | Msa0324020:intron | 35.0% |
| TAGAACTTGTGAGACTATTC+AGG | + | chr2_4:28890306-28890325 | None:intergenic | 35.0% | |
| ACAATGAGAACTCATCTACA+TGG | + | chr2_4:28890355-28890374 | None:intergenic | 35.0% | |
| TTCTTCATACCCTTTGTAAC+GGG | + | chr2_4:28890485-28890504 | None:intergenic | 35.0% | |
| GTTCTTCATACCCTTTGTAA+CGG | + | chr2_4:28890486-28890505 | None:intergenic | 35.0% | |
| ! | AATGATTTGGCTCGTATGTT+TGG | - | chr2_4:28890511-28890530 | Msa0324020:intron | 35.0% |
| GAAAACGACATTCTTCTTGT+CGG | - | chr2_4:28890595-28890614 | Msa0324020:intron | 35.0% | |
| GATTAACTACTTACTCCCAA+GGG | + | chr2_4:28890627-28890646 | None:intergenic | 35.0% | |
| ! | GAAAATGATGATGCGAATAG+TGG | + | chr2_4:28890749-28890768 | None:intergenic | 35.0% |
| TTGAAGTGGAAGGTAAGTTA+GGG | + | chr2_4:28890834-28890853 | None:intergenic | 35.0% | |
| ATTGAAGTGGAAGGTAAGTT+AGG | + | chr2_4:28890835-28890854 | None:intergenic | 35.0% | |
| TTGTGATAGATTGAAGTGGA+AGG | + | chr2_4:28890844-28890863 | None:intergenic | 35.0% | |
| TTAAATTGCTAACAAGGAGG+TGG | + | chr2_4:28890887-28890906 | None:intergenic | 35.0% | |
| AAAGATACTATCATCTGCTG+AGG | - | chr2_4:28891044-28891063 | Msa0324020:five_prime_UTR | 35.0% | |
| TACAACAAATGAGCTTGGAA+GGG | - | chr2_4:28891067-28891086 | Msa0324020:five_prime_UTR | 35.0% | |
| CTTCTTCTTGCTTCTTTGTA+TGG | - | chr2_4:28891285-28891304 | Msa0324020:intron | 35.0% | |
| CTTGGAACATCTAAAGATCT+AGG | + | chr2_4:28891408-28891427 | None:intergenic | 35.0% | |
| GTAGTAAAGGAATCTGTTCT+TGG | + | chr2_4:28891426-28891445 | None:intergenic | 35.0% | |
| !! | TTTTTGGAAAGTTTCAGCTG+TGG | - | chr2_4:28891531-28891550 | Msa0324020:five_prime_UTR | 35.0% |
| !! | TTTTGGAAAGTTTCAGCTGT+GGG | - | chr2_4:28891532-28891551 | Msa0324020:five_prime_UTR | 35.0% |
| TTGAGAGGAATAAGGAAGGA+GGG | + | chr2_4:28883685-28883704 | None:intergenic | 40.0% | |
| TTTGAGAGGAATAAGGAAGG+AGG | + | chr2_4:28883686-28883705 | None:intergenic | 40.0% | |
| AGGTTTGAGAGGAATAAGGA+AGG | + | chr2_4:28883689-28883708 | None:intergenic | 40.0% | |
| AAGCAGGTTTGAGAGGAATA+AGG | + | chr2_4:28883693-28883712 | None:intergenic | 40.0% | |
| AAAAGCAAAGCAGGTTTGAG+AGG | + | chr2_4:28883700-28883719 | None:intergenic | 40.0% | |
| !!! | TGGCATTTTTTGGGGGAAAA+AGG | - | chr2_4:28883991-28884010 | Msa0324020:CDS | 40.0% |
| ! | GGGGAAAAAGGTGAACTTTT+TGG | - | chr2_4:28884003-28884022 | Msa0324020:CDS | 40.0% |
| !!! | GTTGTTGCTGCTGCTATTTT+TGG | - | chr2_4:28884090-28884109 | Msa0324020:intron | 40.0% |
| TGTGGAATACTTGAGGAACA+AGG | - | chr2_4:28884143-28884162 | Msa0324020:intron | 40.0% | |
| TACTTGGCTAATTCTGGTGA+AGG | - | chr2_4:28884262-28884281 | Msa0324020:intron | 40.0% | |
| CACAATTGACAAAGGTGAGA+AGG | + | chr2_4:28884684-28884703 | None:intergenic | 40.0% | |
| CTTCTCACCTTTGTCAATTG+TGG | - | chr2_4:28884682-28884701 | Msa0324020:intron | 40.0% | |
| !! | AGATTGGTGTTGTCAAACAG+TGG | + | chr2_4:28884848-28884867 | None:intergenic | 40.0% |
| AGGCCATCAATTCAGAGTTA+TGG | - | chr2_4:28884952-28884971 | Msa0324020:intron | 40.0% | |
| TAAACAACAAGGCTTCCAAC+AGG | + | chr2_4:28885011-28885030 | None:intergenic | 40.0% | |
| ACTTGTTCACTATGTCCTTG+AGG | + | chr2_4:28885038-28885057 | None:intergenic | 40.0% | |
| TCAACTTGGATGGAAGGTTA+GGG | + | chr2_4:28885179-28885198 | None:intergenic | 40.0% | |
| ATCAACTTGGATGGAAGGTT+AGG | + | chr2_4:28885180-28885199 | None:intergenic | 40.0% | |
| TACAGATCAACTTGGATGGA+AGG | + | chr2_4:28885185-28885204 | None:intergenic | 40.0% | |
| AGCATACAGATCAACTTGGA+TGG | + | chr2_4:28885189-28885208 | None:intergenic | 40.0% | |
| GTGAAGCATACAGATCAACT+TGG | + | chr2_4:28885193-28885212 | None:intergenic | 40.0% | |
| !! | ATGTAGGTCCACTTTTCTCA+TGG | - | chr2_4:28885226-28885245 | Msa0324020:CDS | 40.0% |
| !! | TGTAGGTCCACTTTTCTCAT+GGG | - | chr2_4:28885227-28885246 | Msa0324020:CDS | 40.0% |
| GCAATCAATAGACACCAAGA+AGG | + | chr2_4:28885435-28885454 | None:intergenic | 40.0% | |
| ! | ATCATTCAGGTTTCTTGGTG+AGG | + | chr2_4:28885460-28885479 | None:intergenic | 40.0% |
| ! | GGCTGACCTACTTTATTTAC+AGG | + | chr2_4:28885878-28885897 | None:intergenic | 40.0% |
| TTCGGGGGACATTAAATGAA+CGG | + | chr2_4:28885936-28885955 | None:intergenic | 40.0% | |
| CTTTCTCCTACAGTATGACA+AGG | - | chr2_4:28885993-28886012 | Msa0324020:CDS | 40.0% | |
| TTGCTTCCTTGTCATACTGT+AGG | + | chr2_4:28886002-28886021 | None:intergenic | 40.0% | |
| TGAGAAAATATTCCCACCTC+TGG | - | chr2_4:28886140-28886159 | Msa0324020:CDS | 40.0% | |
| AAATGTTGCATACACACCAG+AGG | + | chr2_4:28886159-28886178 | None:intergenic | 40.0% | |
| ATTGCATCAACATTGGTCAC+AGG | - | chr2_4:28886399-28886418 | Msa0324020:CDS | 40.0% | |
| GTAGTCAATAGATGCCTCTT+TGG | + | chr2_4:28886429-28886448 | None:intergenic | 40.0% | |
| !! | AAGAGGCATCTATTGACTAC+CGG | - | chr2_4:28886429-28886448 | Msa0324020:CDS | 40.0% |
| AGTGTCTTCGTTAGCACAAA+AGG | - | chr2_4:28886456-28886475 | Msa0324020:CDS | 40.0% | |
| ! | TTAGCACAAAAGGCTTTTGC+TGG | - | chr2_4:28886466-28886485 | Msa0324020:CDS | 40.0% |
| TGAAAAGCAGCAACTTCTCT+TGG | - | chr2_4:28886595-28886614 | Msa0324020:CDS | 40.0% | |
| GAAAAGCAGCAACTTCTCTT+GGG | - | chr2_4:28886596-28886615 | Msa0324020:CDS | 40.0% | |
| ATTACCGATGAAGATAGTGC+TGG | + | chr2_4:28886647-28886666 | None:intergenic | 40.0% | |
| TCAAGTGACAGCATGCATAT+CGG | - | chr2_4:28886668-28886687 | Msa0324020:CDS | 40.0% | |
| ATTGCATTCCATGCTCTCAT+AGG | + | chr2_4:28886780-28886799 | None:intergenic | 40.0% | |
| CTGTACACTCATGTTTCTCT+CGG | - | chr2_4:28886899-28886918 | Msa0324020:intron | 40.0% | |
| ! | CAGAATGATGTTTGAGACAG+AGG | - | chr2_4:28886931-28886950 | Msa0324020:intron | 40.0% |
| ! | ATGTTTGAGACAGAGGATTC+AGG | - | chr2_4:28886938-28886957 | Msa0324020:intron | 40.0% |
| ! | TTCAGGAGTACGCAGATATA+TGG | - | chr2_4:28886955-28886974 | Msa0324020:intron | 40.0% |
| ! | TCAGGAGTACGCAGATATAT+GGG | - | chr2_4:28886956-28886975 | Msa0324020:intron | 40.0% |
| AGATATATGGGGACAATCAC+TGG | - | chr2_4:28886968-28886987 | Msa0324020:intron | 40.0% | |
| GATATATGGGGACAATCACT+GGG | - | chr2_4:28886969-28886988 | Msa0324020:intron | 40.0% | |
| AAGGACAACGAATACAACAC+TGG | + | chr2_4:28887341-28887360 | None:intergenic | 40.0% | |
| GCCCAAGTAGAGTTTCAATT+TGG | - | chr2_4:28887505-28887524 | Msa0324020:CDS | 40.0% | |
| GGAGGTGGACAAATGTAAAA+AGG | + | chr2_4:28887552-28887571 | None:intergenic | 40.0% | |
| !!! | TTTGTCCACCTCCGTTTTTT+AGG | - | chr2_4:28887559-28887578 | Msa0324020:CDS | 40.0% |
| !!! | CGACATTCATTTTGAAACGG+AGG | + | chr2_4:28887794-28887813 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr2_4:28888047-28888066 | Msa0324020:CDS | 40.0% |
| ! | GAGGGAGTAGCATTCTTTTA+AGG | - | chr2_4:28888065-28888084 | Msa0324020:CDS | 40.0% |
| CAATCCACAACATCATCCAA+GGG | + | chr2_4:28888130-28888149 | None:intergenic | 40.0% | |
| TCAATCCACAACATCATCCA+AGG | + | chr2_4:28888131-28888150 | None:intergenic | 40.0% | |
| CATTGCATTTGACGAAAGCA+TGG | + | chr2_4:28888372-28888391 | None:intergenic | 40.0% | |
| GGAAGTTCAGTATCTTGGAT+GGG | + | chr2_4:28888418-28888437 | None:intergenic | 40.0% | |
| TGGAAGTTCAGTATCTTGGA+TGG | + | chr2_4:28888419-28888438 | None:intergenic | 40.0% | |
| GGATTGGAAGTTCAGTATCT+TGG | + | chr2_4:28888423-28888442 | None:intergenic | 40.0% | |
| GCTGTTGCAATTGATTGACT+TGG | + | chr2_4:28888499-28888518 | None:intergenic | 40.0% | |
| !! | GTACACACTGATTTGGAATC+TGG | + | chr2_4:28888778-28888797 | None:intergenic | 40.0% |
| AAATCAGTGTGTACAGCAAC+CGG | - | chr2_4:28888784-28888803 | Msa0324020:CDS | 40.0% | |
| TTCCAATCAGCTGGTAAGAA+TGG | - | chr2_4:28888866-28888885 | Msa0324020:intron | 40.0% | |
| ATCCATTCTTACCAGCTGAT+TGG | + | chr2_4:28888871-28888890 | None:intergenic | 40.0% | |
| ! | GTTGTTGGTCTATTTGTTGC+TGG | + | chr2_4:28888928-28888947 | None:intergenic | 40.0% |
| GTAAGAGACCAGATTGTTGT+TGG | + | chr2_4:28888943-28888962 | None:intergenic | 40.0% | |
| AACAATCTGGTCTCTTACAG+CGG | - | chr2_4:28888945-28888964 | Msa0324020:CDS | 40.0% | |
| TGCAACAAAGCATGTTGCAA+AGG | - | chr2_4:28889011-28889030 | Msa0324020:CDS | 40.0% | |
| GCAACAAAGCATGTTGCAAA+GGG | - | chr2_4:28889012-28889031 | Msa0324020:CDS | 40.0% | |
| ! | TGAGACATTTGAGGTTGTTG+TGG | + | chr2_4:28889040-28889059 | None:intergenic | 40.0% |
| ! | GGCGAAATTTGAGACATTTG+AGG | + | chr2_4:28889049-28889068 | None:intergenic | 40.0% |
| !! | TGTTGGTCTGAGATGTTTTG+CGG | + | chr2_4:28889070-28889089 | None:intergenic | 40.0% |
| ! | TATTCTGGAGATGGTTCACA+GGG | + | chr2_4:28889372-28889391 | None:intergenic | 40.0% |
| TCTCCATCTGTAAAAGCAGA+AGG | + | chr2_4:28889424-28889443 | None:intergenic | 40.0% | |
| GTCTGACAGTTATTAGTCGA+TGG | + | chr2_4:28889469-28889488 | None:intergenic | 40.0% | |
| ! | TTTCTTTTCAGAGGGTTTGG+AGG | + | chr2_4:28889496-28889515 | None:intergenic | 40.0% |
| AATCAACCAGACACATTTGG+AGG | - | chr2_4:28889514-28889533 | Msa0324020:intron | 40.0% | |
| ATCAACCAGACACATTTGGA+GGG | - | chr2_4:28889515-28889534 | Msa0324020:intron | 40.0% | |
| TTCGTGGTTTCAACCATTGA+AGG | + | chr2_4:28889541-28889560 | None:intergenic | 40.0% | |
| AACCACGAATAATCTGATGC+AGG | - | chr2_4:28889552-28889571 | Msa0324020:intron | 40.0% | |
| ! | ACCTTTGTGCTTTTGCTTGT+CGG | + | chr2_4:28889635-28889654 | None:intergenic | 40.0% |
| GATCATATGGAAGCTTCTTC+TGG | - | chr2_4:28889664-28889683 | Msa0324020:intron | 40.0% | |
| AGTTAGAAAGTGGGAAGTTC+TGG | + | chr2_4:28889723-28889742 | None:intergenic | 40.0% | |
| CCCACTTTCTAACTTCTACA+TGG | - | chr2_4:28889729-28889748 | Msa0324020:intron | 40.0% | |
| CCATCAAGGTTAGAAGCAAA+TGG | + | chr2_4:28889793-28889812 | None:intergenic | 40.0% | |
| CCATTTGCTTCTAACCTTGA+TGG | - | chr2_4:28889790-28889809 | Msa0324020:intron | 40.0% | |
| GATCAGGTGTTAATCCATCA+AGG | + | chr2_4:28889807-28889826 | None:intergenic | 40.0% | |
| CTGTGAACTAATATCAGCAG+TGG | + | chr2_4:28889923-28889942 | None:intergenic | 40.0% | |
| CCTGGCTTAAAAGACATGTT+TGG | + | chr2_4:28889958-28889977 | None:intergenic | 40.0% | |
| ! | CCAAACATGTCTTTTAAGCC+AGG | - | chr2_4:28889955-28889974 | Msa0324020:intron | 40.0% |
| GGAATTTCATTTGAGCATCC+TGG | + | chr2_4:28889976-28889995 | None:intergenic | 40.0% | |
| GAAATTCCTATTGCCGATAC+TGG | - | chr2_4:28889988-28890007 | Msa0324020:intron | 40.0% | |
| !! | AAAACTCCAGTATCGGCAAT+AGG | + | chr2_4:28889997-28890016 | None:intergenic | 40.0% |
| CATGAGCCCTTATATGCTTA+AGG | + | chr2_4:28890151-28890170 | None:intergenic | 40.0% | |
| GTTCAAAAATGTGGCTCAGT+CGG | - | chr2_4:28890442-28890461 | Msa0324020:intron | 40.0% | |
| ATTGATGTCACCCGTTACAA+AGG | - | chr2_4:28890472-28890491 | Msa0324020:intron | 40.0% | |
| TTGATGTCACCCGTTACAAA+GGG | - | chr2_4:28890473-28890492 | Msa0324020:intron | 40.0% | |
| ! | ACAAAGGGTATGAAGAACTC+CGG | - | chr2_4:28890488-28890507 | Msa0324020:intron | 40.0% |
| TGAAGAACTCCGGAATGATT+TGG | - | chr2_4:28890498-28890517 | Msa0324020:intron | 40.0% | |
| ACATACGAGCCAAATCATTC+CGG | + | chr2_4:28890510-28890529 | None:intergenic | 40.0% | |
| ACAGCTAGAAGATCCTGTAA+GGG | - | chr2_4:28890543-28890562 | Msa0324020:intron | 40.0% | |
| TGACTGGAAACTAGTGTATG+TGG | - | chr2_4:28890567-28890586 | Msa0324020:intron | 40.0% | |
| GGATTAACTACTTACTCCCA+AGG | + | chr2_4:28890628-28890647 | None:intergenic | 40.0% | |
| TGAAAAGTAAACGGCCTGTA+GGG | + | chr2_4:28890674-28890693 | None:intergenic | 40.0% | |
| ATGAAAAGTAAACGGCCTGT+AGG | + | chr2_4:28890675-28890694 | None:intergenic | 40.0% | |
| TGAGGTACAACAAATGAGCT+TGG | - | chr2_4:28891062-28891081 | Msa0324020:five_prime_UTR | 40.0% | |
| GTACAACAAATGAGCTTGGA+AGG | - | chr2_4:28891066-28891085 | Msa0324020:five_prime_UTR | 40.0% | |
| ACAACAAATGAGCTTGGAAG+GGG | - | chr2_4:28891068-28891087 | Msa0324020:five_prime_UTR | 40.0% | |
| ! | CTACAAGCTTGATTGGTGAT+TGG | + | chr2_4:28891111-28891130 | None:intergenic | 40.0% |
| ATCACCAATCAAGCTTGTAG+TGG | - | chr2_4:28891111-28891130 | Msa0324020:five_prime_UTR | 40.0% | |
| TGATCCACTACAAGCTTGAT+TGG | + | chr2_4:28891118-28891137 | None:intergenic | 40.0% | |
| CTTGTACACATTTAGGGAGA+TGG | - | chr2_4:28891234-28891253 | Msa0324020:intron | 40.0% | |
| AGTTCATACATAGCTGCATC+CGG | - | chr2_4:28891343-28891362 | Msa0324020:five_prime_UTR | 40.0% | |
| TCACCATTAAAAGCAGTGTG+CGG | + | chr2_4:28891377-28891396 | None:intergenic | 40.0% | |
| CGGCTTCTCACATAAAGCAA+AGG | - | chr2_4:28883585-28883604 | Msa0324020:three_prime_UTR | 45.0% | |
| !!! | GTTGCTGCTGCTATTTTTGG+AGG | - | chr2_4:28884093-28884112 | Msa0324020:intron | 45.0% |
| GGCTCCTTCTAATGGTTACT+TGG | - | chr2_4:28884246-28884265 | Msa0324020:intron | 45.0% | |
| ! | GGTTTGTTTAAACTCCGCCA+CGG | - | chr2_4:28884720-28884739 | Msa0324020:intron | 45.0% |
| ACAGGCGGTATAGAAACCAA+TGG | + | chr2_4:28884993-28885012 | None:intergenic | 45.0% | |
| TTGGTTTCTATACCGCCTGT+TGG | - | chr2_4:28884993-28885012 | Msa0324020:intron | 45.0% | |
| GGTTGCAGCATCTATGCAAA+AGG | - | chr2_4:28885131-28885150 | Msa0324020:CDS | 45.0% | |
| TGCAGCATCTATGCAAAAGG+AGG | - | chr2_4:28885134-28885153 | Msa0324020:CDS | 45.0% | |
| GATGGAAGGTTAGGGTAACT+TGG | + | chr2_4:28885171-28885190 | None:intergenic | 45.0% | |
| GAAAAGTGGACCTACATGCA+GGG | + | chr2_4:28885223-28885242 | None:intergenic | 45.0% | |
| AGAAAAGTGGACCTACATGC+AGG | + | chr2_4:28885224-28885243 | None:intergenic | 45.0% | |
| !! | TCCACTTTTCTCATGGGACA+TGG | - | chr2_4:28885233-28885252 | Msa0324020:CDS | 45.0% |
| ! | TTTCGATCTTGGCTAGTCGT+AGG | - | chr2_4:28885330-28885349 | Msa0324020:CDS | 45.0% |
| ! | ATTCAGGTTTCTTGGTGAGG+TGG | + | chr2_4:28885457-28885476 | None:intergenic | 45.0% |
| GTATGACAAGGAAGCAATGC+TGG | - | chr2_4:28886005-28886024 | Msa0324020:CDS | 45.0% | |
| ! | ATTTTCTCAGCAGCTCTACG+AGG | + | chr2_4:28886129-28886148 | None:intergenic | 45.0% |
| TTGGCAACTATTTCCTGAGC+TGG | + | chr2_4:28886269-28886288 | None:intergenic | 45.0% | |
| AGGTAAAAGTCGCAATACCG+CGG | + | chr2_4:28886331-28886350 | None:intergenic | 45.0% | |
| GCAACCAGCACTATCTTCAT+CGG | - | chr2_4:28886640-28886659 | Msa0324020:CDS | 45.0% | |
| GACATATGTCGGTCTGTAAG+AGG | + | chr2_4:28886820-28886839 | None:intergenic | 45.0% | |
| ! | CAGGAGTACGCAGATATATG+GGG | - | chr2_4:28886957-28886976 | Msa0324020:intron | 45.0% |
| AATCACTGGGATCAGTGACT+TGG | - | chr2_4:28886982-28887001 | Msa0324020:intron | 45.0% | |
| TCCGCTGGAAAAACTCACAA+TGG | - | chr2_4:28887011-28887030 | Msa0324020:intron | 45.0% | |
| ! | GCCATTGTGAGTTTTTCCAG+CGG | + | chr2_4:28887015-28887034 | None:intergenic | 45.0% |
| !! | TGTTCAATTAGGTGTCGGTG+TGG | + | chr2_4:28887269-28887288 | None:intergenic | 45.0% |
| AACTTCGGCCTAAAAAACGG+AGG | + | chr2_4:28887570-28887589 | None:intergenic | 45.0% | |
| GGGAACTTCGGCCTAAAAAA+CGG | + | chr2_4:28887573-28887592 | None:intergenic | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr2_4:28888046-28888065 | Msa0324020:CDS | 45.0% |
| ACAACATCATCCAAGGGATG+AGG | + | chr2_4:28888124-28888143 | None:intergenic | 45.0% | |
| TCATCCCTTGGATGATGTTG+TGG | - | chr2_4:28888123-28888142 | Msa0324020:CDS | 45.0% | |
| ! | GGATGATGTTGTGGATTGAC+TGG | - | chr2_4:28888132-28888151 | Msa0324020:CDS | 45.0% |
| CATTCAAGAGAGCTATGCCA+TGG | - | chr2_4:28888213-28888232 | Msa0324020:CDS | 45.0% | |
| ACCTCAAGTTCAATCTTCCC+TGG | - | chr2_4:28888263-28888282 | Msa0324020:intron | 45.0% | |
| ACCAGGGAAGATTGAACTTG+AGG | + | chr2_4:28888267-28888286 | None:intergenic | 45.0% | |
| ! | AGTTTTCCGCTGCTCAATCA+GGG | - | chr2_4:28888333-28888352 | Msa0324020:CDS | 45.0% |
| TAAAAGCCCTGATTGAGCAG+CGG | + | chr2_4:28888342-28888361 | None:intergenic | 45.0% | |
| ! | TTTGACGAAAGCATGGATGG+AGG | + | chr2_4:28888365-28888384 | None:intergenic | 45.0% |
| ! | GCATTTGACGAAAGCATGGA+TGG | + | chr2_4:28888368-28888387 | None:intergenic | 45.0% |
| TGGATGGGTCATCAGTGTTA+AGG | + | chr2_4:28888403-28888422 | None:intergenic | 45.0% | |
| GGATTCTGTTGAGTCAGTTG+AGG | + | chr2_4:28888677-28888696 | None:intergenic | 45.0% | |
| TGATGTTGTTGCTGCTGTTG+AGG | + | chr2_4:28888707-28888726 | None:intergenic | 45.0% | |
| ! | GGTTGCTGTACACACTGATT+TGG | + | chr2_4:28888785-28888804 | None:intergenic | 45.0% |
| GAGTAACTGTTGCTGAAGCT+GGG | + | chr2_4:28888819-28888838 | None:intergenic | 45.0% | |
| AGAGTAACTGTTGCTGAAGC+TGG | + | chr2_4:28888820-28888839 | None:intergenic | 45.0% | |
| CTTCAGCAACAGTTACTCTC+AGG | - | chr2_4:28888821-28888840 | Msa0324020:intron | 45.0% | |
| ! | GAATTGCGAGTCTTGTGGTA+AGG | + | chr2_4:28888906-28888925 | None:intergenic | 45.0% |
| ACAACTGCAACTGTTGCTGT+TGG | + | chr2_4:28889087-28889106 | None:intergenic | 45.0% | |
| AGTGGGGAAGATGTAGAAAG+TGG | + | chr2_4:28889193-28889212 | None:intergenic | 45.0% | |
| AAGCTGAGACTGCAAAAGTG+GGG | + | chr2_4:28889209-28889228 | None:intergenic | 45.0% | |
| GAAGCTGAGACTGCAAAAGT+GGG | + | chr2_4:28889210-28889229 | None:intergenic | 45.0% | |
| AGAAGCTGAGACTGCAAAAG+TGG | + | chr2_4:28889211-28889230 | None:intergenic | 45.0% | |
| CGGAAACAACGCATTCTCAA+TGG | - | chr2_4:28889291-28889310 | Msa0324020:intron | 45.0% | |
| ! | GTATTCTGGAGATGGTTCAC+AGG | + | chr2_4:28889373-28889392 | None:intergenic | 45.0% |
| ! | GAAGGAGCTCTAGTGTTTGT+CGG | + | chr2_4:28889406-28889425 | None:intergenic | 45.0% |
| !! | GCTCCTTCTGCTTTTACAGA+TGG | - | chr2_4:28889418-28889437 | Msa0324020:intron | 45.0% |
| ATGGCGAAGTTGAGCATGAT+GGG | + | chr2_4:28889450-28889469 | None:intergenic | 45.0% | |
| CTCCTGCATCAGATTATTCG+TGG | + | chr2_4:28889557-28889576 | None:intergenic | 45.0% | |
| ! | CCTTTGTGCTTTTGCTTGTC+GGG | + | chr2_4:28889634-28889653 | None:intergenic | 45.0% |
| !! | GCTTCTTCTGGAACATCGTA+CGG | - | chr2_4:28889676-28889695 | Msa0324020:intron | 45.0% |
| !! | ACATCGTACGGTATTGATCC+TGG | - | chr2_4:28889688-28889707 | Msa0324020:intron | 45.0% |
| ! | AAGTTCTGGTGGATGTTACC+AGG | + | chr2_4:28889709-28889728 | None:intergenic | 45.0% |
| ! | TAGAAAGTGGGAAGTTCTGG+TGG | + | chr2_4:28889720-28889739 | None:intergenic | 45.0% |
| CTGATCCTTTGCTCTCAAGA+GGG | - | chr2_4:28889821-28889840 | Msa0324020:intron | 45.0% | |
| TCATACCCTCTTGAGAGCAA+AGG | + | chr2_4:28889829-28889848 | None:intergenic | 45.0% | |
| AGCTCGGTTTCAATGTCTCT+AGG | + | chr2_4:28889898-28889917 | None:intergenic | 45.0% | |
| AATATCAGCAGTGGACAGCT+CGG | + | chr2_4:28889914-28889933 | None:intergenic | 45.0% | |
| ! | GCTCGTATGTTTGGTATCGA+AGG | - | chr2_4:28890520-28890539 | Msa0324020:intron | 45.0% |
| GACAGCTAGAAGATCCTGTA+AGG | - | chr2_4:28890542-28890561 | Msa0324020:intron | 45.0% | |
| AAGATCCTGTAAGGGTTGAC+TGG | - | chr2_4:28890551-28890570 | Msa0324020:intron | 45.0% | |
| AGTTTCCAGTCAACCCTTAC+AGG | + | chr2_4:28890559-28890578 | None:intergenic | 45.0% | |
| TTCATATCACTGCACCCTAC+AGG | - | chr2_4:28890657-28890676 | Msa0324020:intron | 45.0% | |
| GTAAGTTAGGGAACGGTGTT+TGG | + | chr2_4:28890822-28890841 | None:intergenic | 45.0% | |
| GTGGAAGGTAAGTTAGGGAA+CGG | + | chr2_4:28890829-28890848 | None:intergenic | 45.0% | |
| !! | GCTTGTAGTGGATCAGAAAG+TGG | - | chr2_4:28891123-28891142 | Msa0324020:five_prime_UTR | 45.0% |
| GATCAGAAAGTGGCAATGCA+TGG | - | chr2_4:28891133-28891152 | Msa0324020:five_prime_UTR | 45.0% | |
| AGAAAGTGGCAATGCATGGA+GGG | - | chr2_4:28891137-28891156 | Msa0324020:five_prime_UTR | 45.0% | |
| GTTCATACATAGCTGCATCC+GGG | - | chr2_4:28891344-28891363 | Msa0324020:five_prime_UTR | 45.0% | |
| GTAGCTGCTAGTGCTTGATT+AGG | - | chr2_4:28891481-28891500 | Msa0324020:five_prime_UTR | 45.0% | |
| !!! | TTCATATTTTTATTTATTTT+TGG | - | chr2_4:28885802-28885821 | Msa0324020:CDS | 5.0% |
| CGCCGGGAAATCAGAAGAAA+AGG | + | chr2_4:28883645-28883664 | None:intergenic | 50.0% | |
| ! | TGATGTGTCTGACTTGTCGC+CGG | + | chr2_4:28883662-28883681 | None:intergenic | 50.0% |
| GAGTTATGGCATGCTTGTGC+CGG | - | chr2_4:28884966-28884985 | Msa0324020:intron | 50.0% | |
| AGTTATGGCATGCTTGTGCC+GGG | - | chr2_4:28884967-28884986 | Msa0324020:intron | 50.0% | |
| CGGTATAGAAACCAATGGCC+CGG | + | chr2_4:28884988-28885007 | None:intergenic | 50.0% | |
| ACAACAAGGCTTCCAACAGG+CGG | + | chr2_4:28885008-28885027 | None:intergenic | 50.0% | |
| CACAATGTTGCCCTGCATGT+AGG | - | chr2_4:28885210-28885229 | Msa0324020:CDS | 50.0% | |
| GCCATGTCCCATGAGAAAAG+TGG | + | chr2_4:28885237-28885256 | None:intergenic | 50.0% | |
| !! | CATAGACCTCGTCGGTTTCA+GGG | + | chr2_4:28885838-28885857 | None:intergenic | 50.0% |
| CATCTGTGCATAGACCTCGT+CGG | + | chr2_4:28885846-28885865 | None:intergenic | 50.0% | |
| !! | AGCAATGCTGGCTTCAGACA+TGG | - | chr2_4:28886017-28886036 | Msa0324020:CDS | 50.0% |
| !! | GCAATGCTGGCTTCAGACAT+GGG | - | chr2_4:28886018-28886037 | Msa0324020:CDS | 50.0% |
| GCTAGTGACACTAGCACTCA+CGG | - | chr2_4:28886090-28886109 | Msa0324020:CDS | 50.0% | |
| GTTGCATACACACCAGAGGT+GGG | + | chr2_4:28886155-28886174 | None:intergenic | 50.0% | |
| TGTTGCATACACACCAGAGG+TGG | + | chr2_4:28886156-28886175 | None:intergenic | 50.0% | |
| GCAACTATTTCCTGAGCTGG+CGG | + | chr2_4:28886266-28886285 | None:intergenic | 50.0% | |
| TGGTCACAGGACAACCAAAG+AGG | - | chr2_4:28886412-28886431 | Msa0324020:CDS | 50.0% | |
| ! | GGCATCTATTGACTACCGGT+TGG | - | chr2_4:28886433-28886452 | Msa0324020:CDS | 50.0% |
| GCTAACGAAGACACTCCAAC+CGG | + | chr2_4:28886451-28886470 | None:intergenic | 50.0% | |
| !! | TAGTGCTGGTTGCTGTCTAC+TGG | + | chr2_4:28886633-28886652 | None:intergenic | 50.0% |
| TATCGGCATTCTTGCTGCTG+CGG | - | chr2_4:28886685-28886704 | Msa0324020:CDS | 50.0% | |
| ! | TGTGAGTTTTTCCAGCGGAC+AGG | + | chr2_4:28887010-28887029 | None:intergenic | 50.0% |
| CTCACAATGGCGCAATCTTC+AGG | - | chr2_4:28887024-28887043 | Msa0324020:intron | 50.0% | |
| !! | ATTAGGTGTCGGTGTGGTGT+CGG | + | chr2_4:28887263-28887282 | None:intergenic | 50.0% |
| TTCGGCCTAAAAAACGGAGG+TGG | + | chr2_4:28887567-28887586 | None:intergenic | 50.0% | |
| AAGGAGGAACTCTTGCTACC+TGG | + | chr2_4:28887612-28887631 | None:intergenic | 50.0% | |
| ATTTGCCTCTCCTCATCCCT+TGG | - | chr2_4:28888111-28888130 | Msa0324020:CDS | 50.0% | |
| ATCATCCAAGGGATGAGGAG+AGG | + | chr2_4:28888119-28888138 | None:intergenic | 50.0% | |
| AAGAGAGCTATGCCATGGCT+TGG | - | chr2_4:28888218-28888237 | Msa0324020:intron | 50.0% | |
| ! | CCATGGCTTGGAGATGAACT+CGG | - | chr2_4:28888230-28888249 | Msa0324020:intron | 50.0% |
| TGGAGATGAACTCGGCATGA+AGG | - | chr2_4:28888238-28888257 | Msa0324020:intron | 50.0% | |
| ! | CAGTTTTCCGCTGCTCAATC+AGG | - | chr2_4:28888332-28888351 | Msa0324020:CDS | 50.0% |
| ! | TTGGATTAGAGAGCGCAGCA+GGG | + | chr2_4:28888445-28888464 | None:intergenic | 50.0% |
| CAATCAATTGCAACAGCCCC+CGG | - | chr2_4:28888502-28888521 | Msa0324020:intron | 50.0% | |
| ! | TGCAGCTGGTTTAACGGCAT+TGG | + | chr2_4:28888578-28888597 | None:intergenic | 50.0% |
| ! | TGCTGCTGCAGCTGGTTTAA+CGG | + | chr2_4:28888584-28888603 | None:intergenic | 50.0% |
| AGTTGAGGCTGTTGTTGCTG+TGG | + | chr2_4:28888662-28888681 | None:intergenic | 50.0% | |
| TGAAGCTGGGAGTAGGTTAC+CGG | + | chr2_4:28888806-28888825 | None:intergenic | 50.0% | |
| TGCTGGAATTGCGAGTCTTG+TGG | + | chr2_4:28888911-28888930 | None:intergenic | 50.0% | |
| !! | GGCATTTGCTGGCTTTGTTG+CGG | + | chr2_4:28889235-28889254 | None:intergenic | 50.0% |
| ! | TGCGTTGTTTCCGAGCTGTT+GGG | + | chr2_4:28889284-28889303 | None:intergenic | 50.0% |
| ! | ATGCGTTGTTTCCGAGCTGT+TGG | + | chr2_4:28889285-28889304 | None:intergenic | 50.0% |
| TGGCGAAGTTGAGCATGATG+GGG | + | chr2_4:28889449-28889468 | None:intergenic | 50.0% | |
| GATGGCGAAGTTGAGCATGA+TGG | + | chr2_4:28889451-28889470 | None:intergenic | 50.0% | |
| CACATTTGGAGGGCCTTCAA+TGG | - | chr2_4:28889525-28889544 | Msa0324020:intron | 50.0% | |
| ! | CCCGACAAGCAAAAGCACAA+AGG | - | chr2_4:28889631-28889650 | Msa0324020:intron | 50.0% |
| CCTCTTGAGAGCAAAGGATC+AGG | + | chr2_4:28889823-28889842 | None:intergenic | 50.0% | |
| CCTGATCCTTTGCTCTCAAG+AGG | - | chr2_4:28889820-28889839 | Msa0324020:intron | 50.0% | |
| ATGAGCTTGGAAGGGGACTT+AGG | - | chr2_4:28891075-28891094 | Msa0324020:five_prime_UTR | 50.0% | |
| CAGAAAGTGGCAATGCATGG+AGG | - | chr2_4:28891136-28891155 | Msa0324020:five_prime_UTR | 50.0% | |
| !! | CGTCCGCACACTGCTTTTAA+TGG | - | chr2_4:28891371-28891390 | Msa0324020:five_prime_UTR | 50.0% |
| ! | GATGTGTCTGACTTGTCGCC+GGG | + | chr2_4:28883661-28883680 | None:intergenic | 55.0% |
| GTTTAAACTCCGCCACGGCA+TGG | - | chr2_4:28884725-28884744 | Msa0324020:intron | 55.0% | |
| !! | GCATAGACCTCGTCGGTTTC+AGG | + | chr2_4:28885839-28885858 | None:intergenic | 55.0% |
| AGTGACACTAGCACTCACGG+CGG | - | chr2_4:28886093-28886112 | Msa0324020:CDS | 55.0% | |
| GGATGGGACGAATCAACAGC+TGG | - | chr2_4:28887477-28887496 | Msa0324020:CDS | 55.0% | |
| CCTGGTTGCTTCGGGAACTT+CGG | + | chr2_4:28887585-28887604 | None:intergenic | 55.0% | |
| CTGGCATTCCTGGTTGCTTC+GGG | + | chr2_4:28887593-28887612 | None:intergenic | 55.0% | |
| CCTGGCATTCCTGGTTGCTT+CGG | + | chr2_4:28887594-28887613 | None:intergenic | 55.0% | |
| CTCTTGCTACCTGGCATTCC+TGG | + | chr2_4:28887603-28887622 | None:intergenic | 55.0% | |
| CCGAGTTCATCTCCAAGCCA+TGG | + | chr2_4:28888233-28888252 | None:intergenic | 55.0% | |
| ! | TGGATTAGAGAGCGCAGCAG+GGG | + | chr2_4:28888444-28888463 | None:intergenic | 55.0% |
| ! | CTTGGATTAGAGAGCGCAGC+AGG | + | chr2_4:28888446-28888465 | None:intergenic | 55.0% |
| ! | TTGCTGTTGCTGAGACCACG+AGG | + | chr2_4:28888528-28888547 | None:intergenic | 55.0% |
| ! | TGTGGCTGCGGCAGATTTTG+TGG | + | chr2_4:28888644-28888663 | None:intergenic | 55.0% |
| CTGTTGCTGAAGCTGGGAGT+AGG | + | chr2_4:28888813-28888832 | None:intergenic | 55.0% | |
| ! | TAGGCTGCTGAGGCATTTGC+TGG | + | chr2_4:28889246-28889265 | None:intergenic | 55.0% |
| ! | GCGTTGTTTCCGAGCTGTTG+GGG | + | chr2_4:28889283-28889302 | None:intergenic | 55.0% |
| AGCTGCTGCGAATGCATGAG+AGG | + | chr2_4:28889349-28889368 | None:intergenic | 55.0% | |
| GAAGGCCCTCCAAATGTGTC+TGG | + | chr2_4:28889523-28889542 | None:intergenic | 55.0% | |
| TTCTTGTCGGCGATGACCCT+TGG | - | chr2_4:28890608-28890627 | Msa0324020:intron | 55.0% | |
| TCTTGTCGGCGATGACCCTT+GGG | - | chr2_4:28890609-28890628 | Msa0324020:intron | 55.0% | |
| AGTTTCAGCTGTGGGTCAGC+TGG | - | chr2_4:28891540-28891559 | Msa0324020:five_prime_UTR | 55.0% | |
| CTCAATGCAACCGCCAGCTC+AGG | - | chr2_4:28886253-28886272 | Msa0324020:CDS | 60.0% | |
| ! | GTGACTTGGATCCTGTCCGC+TGG | - | chr2_4:28886996-28887015 | Msa0324020:intron | 60.0% |
| CCGAAGTTCCCGAAGCAACC+AGG | - | chr2_4:28887582-28887601 | Msa0324020:CDS | 60.0% | |
| CCGAAGCAACCAGGAATGCC+AGG | - | chr2_4:28887591-28887610 | Msa0324020:CDS | 60.0% | |
| ! | TAGAGAGCGCAGCAGGGGAT+TGG | + | chr2_4:28888439-28888458 | None:intergenic | 60.0% |
| TGTTGCTGAGACCACGAGGC+CGG | + | chr2_4:28888524-28888543 | None:intergenic | 60.0% | |
| AGCAGCAGCAACAGCAGCAG+AGG | - | chr2_4:28888600-28888619 | Msa0324020:intron | 60.0% | |
| GGCTGTTGTTGCTGTGGCTG+CGG | + | chr2_4:28888656-28888675 | None:intergenic | 60.0% | |
| TGCTGCTGTTGAGGCTGCTG+CGG | + | chr2_4:28888698-28888717 | None:intergenic | 60.0% | |
| TGCTGGGACATAGGCTGCTG+AGG | + | chr2_4:28889256-28889275 | None:intergenic | 60.0% | |
| TGGGGCTGATGCTGGGACAT+AGG | + | chr2_4:28889265-28889284 | None:intergenic | 60.0% | |
| GAGCTGTTGGGGCTGATGCT+GGG | + | chr2_4:28889272-28889291 | None:intergenic | 60.0% | |
| CAGCATCAGCCCCAACAGCT+CGG | - | chr2_4:28889271-28889290 | Msa0324020:intron | 60.0% | |
| GCTGTAGCACCATGCCGTGG+CGG | + | chr2_4:28884737-28884756 | None:intergenic | 65.0% | |
| GCATGCTTGTGCCGGGCCAT+TGG | - | chr2_4:28884974-28884993 | Msa0324020:intron | 65.0% | |
| GGCTGACCCTGAAACCGACG+AGG | - | chr2_4:28885829-28885848 | Msa0324020:CDS | 65.0% | |
| TTGCTGAGACCACGAGGCCG+GGG | + | chr2_4:28888522-28888541 | None:intergenic | 65.0% | |
| GTTGCTGAGACCACGAGGCC+GGG | + | chr2_4:28888523-28888542 | None:intergenic | 65.0% | |
| GTTGCTGCTGCTGCTGCAGC+TGG | + | chr2_4:28888592-28888611 | None:intergenic | 65.0% | |
| GCAGCAGAGGCAACAGCAGC+TGG | - | chr2_4:28888613-28888632 | Msa0324020:intron | 65.0% | |
| CAGAGGCAACAGCAGCTGGC+TGG | - | chr2_4:28888617-28888636 | Msa0324020:intron | 65.0% | |
| CGAGCTGTTGGGGCTGATGC+TGG | + | chr2_4:28889273-28889292 | None:intergenic | 65.0% | |
| GGCGCTGTAGCACCATGCCG+TGG | + | chr2_4:28884740-28884759 | None:intergenic | 70.0% | |
| TGCTGAGACCACGAGGCCGG+GGG | + | chr2_4:28888521-28888540 | None:intergenic | 70.0% | |
| GCAGTGTGCGGACGCAGACC+CGG | + | chr2_4:28891365-28891384 | None:intergenic | 70.0% | |
| TGCAACAGCCCCCGGCCTCG+TGG | - | chr2_4:28888510-28888529 | Msa0324020:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 28883396 | 28891688 | 28883396 | ID=Msa0324020;Name=Msa0324020 |
| chr2_4 | mRNA | 28883396 | 28891688 | 28883396 | ID=Msa0324020-mRNA-1;Parent=Msa0324020;Name=Msa0324020-mRNA-1;_AED=0.11;_eAED=0.11;_QI=759|0.92|0.92|1|0.92|0.85|14|488|1114 |
| chr2_4 | exon | 28883396 | 28884067 | 28883396 | ID=Msa0324020-mRNA-1:exon:9897;Parent=Msa0324020-mRNA-1 |
| chr2_4 | exon | 28884452 | 28884642 | 28884452 | ID=Msa0324020-mRNA-1:exon:9896;Parent=Msa0324020-mRNA-1 |
| chr2_4 | exon | 28885016 | 28886895 | 28885016 | ID=Msa0324020-mRNA-1:exon:9895;Parent=Msa0324020-mRNA-1 |
| chr2_4 | exon | 28887472 | 28887610 | 28887472 | ID=Msa0324020-mRNA-1:exon:9894;Parent=Msa0324020-mRNA-1 |
| chr2_4 | exon | 28888039 | 28888234 | 28888039 | ID=Msa0324020-mRNA-1:exon:9893;Parent=Msa0324020-mRNA-1 |
| chr2_4 | exon | 28888328 | 28888492 | 28888328 | ID=Msa0324020-mRNA-1:exon:9892;Parent=Msa0324020-mRNA-1 |
| chr2_4 | exon | 28888575 | 28888614 | 28888575 | ID=Msa0324020-mRNA-1:exon:9891;Parent=Msa0324020-mRNA-1 |
| chr2_4 | exon | 28888752 | 28888836 | 28888752 | ID=Msa0324020-mRNA-1:exon:9890;Parent=Msa0324020-mRNA-1 |
| chr2_4 | exon | 28888923 | 28889078 | 28888923 | ID=Msa0324020-mRNA-1:exon:9889;Parent=Msa0324020-mRNA-1 |
| chr2_4 | exon | 28889198 | 28889254 | 28889198 | ID=Msa0324020-mRNA-1:exon:9888;Parent=Msa0324020-mRNA-1 |
| chr2_4 | exon | 28889857 | 28889952 | 28889857 | ID=Msa0324020-mRNA-1:exon:9887;Parent=Msa0324020-mRNA-1 |
| chr2_4 | exon | 28890029 | 28890141 | 28890029 | ID=Msa0324020-mRNA-1:exon:9886;Parent=Msa0324020-mRNA-1 |
| chr2_4 | exon | 28890801 | 28891204 | 28890801 | ID=Msa0324020-mRNA-1:exon:9885;Parent=Msa0324020-mRNA-1 |
| chr2_4 | exon | 28891291 | 28891688 | 28891291 | ID=Msa0324020-mRNA-1:exon:9884;Parent=Msa0324020-mRNA-1 |
| chr2_4 | five_prime_UTR | 28891291 | 28891688 | 28891291 | ID=Msa0324020-mRNA-1:five_prime_utr;Parent=Msa0324020-mRNA-1 |
| chr2_4 | five_prime_UTR | 28890844 | 28891204 | 28890844 | ID=Msa0324020-mRNA-1:five_prime_utr;Parent=Msa0324020-mRNA-1 |
| chr2_4 | CDS | 28890801 | 28890843 | 28890801 | ID=Msa0324020-mRNA-1:cds;Parent=Msa0324020-mRNA-1 |
| chr2_4 | CDS | 28890029 | 28890141 | 28890029 | ID=Msa0324020-mRNA-1:cds;Parent=Msa0324020-mRNA-1 |
| chr2_4 | CDS | 28889857 | 28889952 | 28889857 | ID=Msa0324020-mRNA-1:cds;Parent=Msa0324020-mRNA-1 |
| chr2_4 | CDS | 28889198 | 28889254 | 28889198 | ID=Msa0324020-mRNA-1:cds;Parent=Msa0324020-mRNA-1 |
| chr2_4 | CDS | 28888923 | 28889078 | 28888923 | ID=Msa0324020-mRNA-1:cds;Parent=Msa0324020-mRNA-1 |
| chr2_4 | CDS | 28888752 | 28888836 | 28888752 | ID=Msa0324020-mRNA-1:cds;Parent=Msa0324020-mRNA-1 |
| chr2_4 | CDS | 28888575 | 28888614 | 28888575 | ID=Msa0324020-mRNA-1:cds;Parent=Msa0324020-mRNA-1 |
| chr2_4 | CDS | 28888328 | 28888492 | 28888328 | ID=Msa0324020-mRNA-1:cds;Parent=Msa0324020-mRNA-1 |
| chr2_4 | CDS | 28888039 | 28888234 | 28888039 | ID=Msa0324020-mRNA-1:cds;Parent=Msa0324020-mRNA-1 |
| chr2_4 | CDS | 28887472 | 28887610 | 28887472 | ID=Msa0324020-mRNA-1:cds;Parent=Msa0324020-mRNA-1 |
| chr2_4 | CDS | 28885016 | 28886895 | 28885016 | ID=Msa0324020-mRNA-1:cds;Parent=Msa0324020-mRNA-1 |
| chr2_4 | CDS | 28884452 | 28884642 | 28884452 | ID=Msa0324020-mRNA-1:cds;Parent=Msa0324020-mRNA-1 |
| chr2_4 | CDS | 28883884 | 28884067 | 28883884 | ID=Msa0324020-mRNA-1:cds;Parent=Msa0324020-mRNA-1 |
| chr2_4 | three_prime_UTR | 28883396 | 28883883 | 28883396 | ID=Msa0324020-mRNA-1:three_prime_utr;Parent=Msa0324020-mRNA-1 |
| Gene Sequence |
| Protein sequence |