AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0566090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0566090 MtrunA17_Chr8g0380531 96.739 460 15 0 1 460 1 460 0.0 926
Msa0566090 MtrunA17_Chr6g0464841 48.802 459 229 3 2 459 3 456 1.51e-160 461
Msa0566090 MtrunA17_Chr6g0464881 48.796 457 228 3 2 457 3 454 2.76e-160 461
Msa0566090 MtrunA17_Chr6g0464871 48.584 459 230 3 2 459 15 468 3.21e-157 453
Msa0566090 MtrunA17_Chr6g0464861 48.472 458 229 3 3 459 4 455 1.28e-156 451
Msa0566090 MtrunA17_Chr5g0414331 46.711 456 234 3 6 460 9 456 1.93e-152 441
Msa0566090 MtrunA17_Chr6g0464921 47.277 459 236 4 1 457 1 455 6.60e-151 437
Msa0566090 MtrunA17_Chr5g0414321 46.204 461 233 5 1 457 2 451 3.93e-149 432
Msa0566090 MtrunA17_Chr7g0250001 46.000 450 235 3 9 457 5 447 1.36e-147 429
Msa0566090 MtrunA17_Chr7g0249981 46.358 453 235 3 6 457 21 466 4.62e-147 428
Msa0566090 MtrunA17_Chr7g0249931 44.956 456 239 7 6 457 36 483 8.62e-133 392
Msa0566090 MtrunA17_Chr8g0377921 40.987 466 247 15 10 455 4 461 1.65e-104 318
Msa0566090 MtrunA17_Chr3g0121991 39.158 475 254 13 10 457 79 545 5.69e-102 315
Msa0566090 MtrunA17_Chr3g0098111 37.395 476 263 12 7 458 6 470 2.67e-99 306
Msa0566090 MtrunA17_Chr4g0053501 36.247 469 273 9 5 457 6 464 1.24e-97 302
Msa0566090 MtrunA17_Chr1g0207981 36.831 467 271 8 9 457 12 472 6.78e-97 300
Msa0566090 MtrunA17_Chr8g0377941 38.559 472 249 13 10 457 7 461 7.59e-95 294
Msa0566090 MtrunA17_Chr1g0207861 36.632 475 268 11 7 458 5 469 2.75e-94 293
Msa0566090 MtrunA17_Chr3g0122001 38.136 472 263 11 10 457 486 952 1.21e-93 303
Msa0566090 MtrunA17_Chr3g0122001 38.055 473 263 13 10 457 6 473 3.23e-92 299
Msa0566090 MtrunA17_Chr4g0053321 35.622 466 274 9 8 457 24 479 1.98e-88 278
Msa0566090 MtrunA17_Chr1g0207971 34.194 465 280 9 7 459 5 455 3.88e-87 274
Msa0566090 MtrunA17_Chr1g0161351 35.565 478 283 10 1 459 28 499 7.64e-87 274
Msa0566090 MtrunA17_Chr5g0393591 32.979 470 246 11 10 459 17 437 5.07e-84 266
Msa0566090 MtrunA17_Chr8g0365811 34.519 478 284 11 3 458 488 958 7.40e-84 277
Msa0566090 MtrunA17_Chr8g0365811 35.220 477 278 12 7 458 6 476 1.78e-81 271
Msa0566090 MtrunA17_Chr5g0401721 34.526 475 274 15 9 457 7 470 9.03e-83 263
Msa0566090 MtrunA17_Chr7g0250021 41.824 318 179 4 6 321 8 321 1.79e-82 257
Msa0566090 MtrunA17_Chr1g0207951 33.333 474 285 8 3 459 113 572 7.21e-82 274
Msa0566090 MtrunA17_Chr1g0207951 34.382 477 284 11 2 459 644 1110 1.34e-81 273
Msa0566090 MtrunA17_Chr1g0207831 32.484 471 286 12 9 459 7 465 9.30e-80 255
Msa0566090 MtrunA17_Chr1g0207931 32.704 477 237 12 4 459 86 499 8.18e-78 251
Msa0566090 MtrunA17_Chr7g0249961 48.117 239 120 2 220 457 24 259 1.94e-74 234
Msa0566090 MtrunA17_Chr3g0092641 34.238 479 272 15 10 457 12 478 2.57e-74 241
Msa0566090 MtrunA17_Chr5g0426431 33.191 467 269 14 10 445 12 466 2.66e-71 233
Msa0566090 MtrunA17_Chr6g0454341 31.857 474 285 15 10 454 10 474 1.08e-67 224
Msa0566090 MtrunA17_Chr2g0278711 31.458 480 283 14 10 457 11 476 2.70e-67 223
Msa0566090 MtrunA17_Chr4g0050341 33.129 489 277 13 7 458 16 491 8.66e-67 222
Msa0566090 MtrunA17_Chr3g0078841 31.393 481 284 18 10 457 10 477 1.21e-65 218
Msa0566090 MtrunA17_Chr5g0412111 32.627 472 285 15 10 460 5 464 1.84e-65 218
Msa0566090 MtrunA17_Chr7g0218791 31.064 470 276 11 10 459 5 446 5.85e-65 216
Msa0566090 MtrunA17_Chr3g0112761 33.475 472 266 20 4 454 2 446 2.42e-64 214
Msa0566090 MtrunA17_Chr5g0412131 33.881 487 278 19 1 460 3 472 1.04e-63 213
Msa0566090 MtrunA17_Chr7g0217881 32.258 465 285 14 10 457 10 461 3.53e-63 211
Msa0566090 MtrunA17_Chr6g0454191 30.550 491 296 15 1 457 1 480 4.55e-63 212
Msa0566090 MtrunA17_Chr3g0118711 29.645 479 295 14 10 457 13 480 4.66e-63 212
Msa0566090 MtrunA17_Chr8g0359821 29.832 476 298 12 10 457 10 477 5.73e-63 211
Msa0566090 MtrunA17_Chr8g0336331 30.515 485 291 16 4 457 7 476 1.41e-62 210
Msa0566090 MtrunA17_Chr5g0412101 33.608 485 281 17 2 460 4 473 1.43e-62 210
Msa0566090 MtrunA17_Chr3g0118671 29.072 485 296 14 9 459 5 475 9.37e-62 208
Msa0566090 MtrunA17_Chr6g0454301 30.189 477 295 13 10 457 263 730 1.75e-61 213
Msa0566090 MtrunA17_Chr6g0454301 34.951 206 124 4 255 456 29 228 2.23e-34 136
Msa0566090 MtrunA17_Chr5g0431441 30.769 468 284 14 10 457 18 465 4.69e-61 206
Msa0566090 MtrunA17_Chr6g0454331 29.098 488 296 14 7 457 4 478 3.38e-60 204
Msa0566090 MtrunA17_Chr3g0106231 31.635 471 268 15 10 460 18 454 8.54e-60 203
Msa0566090 MtrunA17_Chr3g0118771 28.660 485 300 15 6 457 17 488 3.62e-59 202
Msa0566090 MtrunA17_Chr6g0454321 30.323 465 282 13 10 443 10 463 4.52e-59 205
Msa0566090 MtrunA17_Chr3g0118691 28.958 480 297 14 10 457 15 482 5.53e-59 201
Msa0566090 MtrunA17_Chr6g0454401 29.857 489 284 17 10 457 10 480 6.45e-59 201
Msa0566090 MtrunA17_Chr7g0218831 30.323 465 272 13 10 455 6 437 1.70e-58 198
Msa0566090 MtrunA17_Chr3g0118701 28.898 481 296 15 10 457 15 482 2.11e-58 199
Msa0566090 MtrunA17_Chr6g0454141 29.592 490 283 16 10 457 10 479 4.36e-58 198
Msa0566090 MtrunA17_Chr7g0218811 28.947 456 291 8 10 455 15 447 1.69e-57 196
Msa0566090 MtrunA17_Chr6g0454151 30.769 494 279 20 1 454 4 474 1.71e-57 197
Msa0566090 MtrunA17_Chr6g0453961 29.959 484 290 16 10 457 19 489 4.30e-57 196
Msa0566090 MtrunA17_Chr3g0112771 31.368 475 284 16 1 457 1 451 1.06e-56 194
Msa0566090 MtrunA17_Chr6g0454361 29.124 491 284 15 10 457 11 480 1.48e-56 194
Msa0566090 MtrunA17_Chr6g0452771 29.918 488 284 13 10 457 10 479 1.84e-56 194
Msa0566090 MtrunA17_Chr7g0243631 30.738 488 288 15 9 458 12 487 5.23e-56 193
Msa0566090 MtrunA17_Chr6g0454201 29.814 483 291 14 10 457 11 480 9.56e-56 192
Msa0566090 MtrunA17_Chr6g0454181 28.807 486 292 14 10 457 10 479 1.24e-55 192
Msa0566090 MtrunA17_Chr5g0423981 29.424 469 276 15 10 457 10 444 1.51e-55 191
Msa0566090 MtrunA17_Chr6g0454291 29.835 486 293 15 7 457 4 476 1.67e-55 191
Msa0566090 MtrunA17_Chr3g0118661 28.870 478 293 17 6 450 9 472 4.23e-55 191
Msa0566090 MtrunA17_Chr7g0243681 29.960 504 283 19 1 458 1 480 4.40e-55 191
Msa0566090 MtrunA17_Chr7g0218841 30.501 459 278 13 10 454 6 437 5.19e-55 189
Msa0566090 MtrunA17_Chr5g0431361 27.623 467 294 11 10 457 12 453 6.79e-55 189
Msa0566090 MtrunA17_Chr6g0454211 29.607 483 292 15 10 457 297 766 1.34e-54 194
Msa0566090 MtrunA17_Chr6g0454211 30.583 206 112 5 167 371 61 236 6.31e-18 86.7
Msa0566090 MtrunA17_Chr4g0032331 31.435 474 261 17 10 454 8 446 1.45e-54 188
Msa0566090 MtrunA17_Chr7g0218821 28.753 473 287 13 10 458 5 451 2.54e-54 187
Msa0566090 MtrunA17_Chr6g0454351 29.569 487 270 19 10 457 12 464 3.78e-54 187
Msa0566090 MtrunA17_Chr6g0454261 28.283 495 298 15 1 457 4 479 7.59e-54 187
Msa0566090 MtrunA17_Chr5g0448551 29.742 427 272 11 11 425 8 418 2.49e-53 185
Msa0566090 MtrunA17_Chr6g0453951 28.067 481 302 15 10 457 57 526 4.37e-53 186
Msa0566090 MtrunA17_Chr7g0243931 30.060 499 294 15 1 458 7 491 4.58e-53 186
Msa0566090 MtrunA17_Chr6g0454131 29.730 481 287 18 10 454 10 475 5.38e-53 185
Msa0566090 MtrunA17_Chr7g0232401 28.778 483 298 14 6 458 2 468 2.43e-52 183
Msa0566090 MtrunA17_Chr5g0431401 27.233 459 303 10 10 457 10 448 3.67e-52 182
Msa0566090 MtrunA17_Chr3g0118751 28.512 477 274 15 10 457 6 444 4.42e-52 182
Msa0566090 MtrunA17_Chr8g0366391 28.571 490 303 17 3 458 2 478 4.72e-52 182
Msa0566090 MtrunA17_Chr8g0347281 30.290 482 275 13 11 458 19 473 7.97e-52 182
Msa0566090 MtrunA17_Chr6g0454121 27.801 482 295 14 10 454 10 475 2.83e-51 180
Msa0566090 MtrunA17_Chr4g0044511 28.747 487 298 16 5 458 35 505 3.39e-51 181
Msa0566090 MtrunA17_Chr7g0275511 29.675 492 267 14 11 456 16 474 8.38e-51 179
Msa0566090 MtrunA17_Chr7g0243951 30.099 505 285 19 1 458 1 484 1.31e-50 179
Msa0566090 MtrunA17_Chr7g0243771 29.622 503 274 18 7 458 3 476 1.59e-50 178
Msa0566090 MtrunA17_Chr5g0419771 30.691 492 278 19 1 446 27 501 1.75e-50 179
Msa0566090 MtrunA17_Chr7g0243871 29.940 501 277 19 3 458 2 473 2.76e-50 178
Msa0566090 MtrunA17_Chr5g0432731 36.641 262 149 6 202 457 46 296 6.28e-50 172
Msa0566090 MtrunA17_Chr7g0265141 30.556 504 275 17 5 456 4 484 9.41e-50 176
Msa0566090 MtrunA17_Chr4g0060511 28.032 503 297 18 3 458 4 488 2.02e-49 176
Msa0566090 MtrunA17_Chr6g0449931 29.569 487 287 14 7 458 3 468 3.75e-49 174
Msa0566090 MtrunA17_Chr7g0243761 28.717 491 276 14 3 458 4 455 1.18e-48 173
Msa0566090 MtrunA17_Chr5g0401851 29.637 496 299 15 1 458 1 484 1.48e-48 173
Msa0566090 MtrunA17_Chr7g0243861 29.400 500 291 15 3 458 7 488 1.95e-48 173
Msa0566090 MtrunA17_Chr8g0373301 29.821 503 272 19 1 458 1 467 3.71e-48 172
Msa0566090 MtrunA17_Chr5g0431371 25.758 462 306 10 10 457 10 448 5.11e-48 171
Msa0566090 MtrunA17_Chr8g0347271 28.866 485 278 13 11 458 20 474 5.41e-48 171
Msa0566090 MtrunA17_Chr4g0044501 29.184 490 299 18 1 457 1 475 7.95e-48 171
Msa0566090 MtrunA17_Chr8g0361371 29.741 501 275 19 1 456 1 469 8.01e-48 171
Msa0566090 MtrunA17_Chr4g0066151 27.309 498 296 16 1 458 9 480 1.10e-47 171
Msa0566090 MtrunA17_Chr5g0431421 26.797 459 305 11 10 457 10 448 1.19e-47 170
Msa0566090 MtrunA17_Chr7g0243801 29.341 501 282 19 5 458 2 477 1.22e-47 171
Msa0566090 MtrunA17_Chr4g0044521 28.512 484 290 15 5 455 4 464 4.28e-47 169
Msa0566090 MtrunA17_Chr4g0014061 28.921 491 289 19 5 457 4 472 5.12e-47 169
Msa0566090 MtrunA17_Chr7g0232391 27.310 487 294 13 6 456 2 464 1.04e-46 168
Msa0566090 MtrunA17_Chr4g0066221 28.543 494 289 20 9 459 10 482 1.75e-46 167
Msa0566090 MtrunA17_Chr5g0426401 34.122 296 172 9 150 436 7 288 1.77e-46 163
Msa0566090 MtrunA17_Chr7g0232331 27.600 500 283 13 6 459 2 468 1.93e-46 167
Msa0566090 MtrunA17_Chr7g0265101 29.124 491 298 17 9 459 8 488 3.46e-46 167
Msa0566090 MtrunA17_Chr7g0232411 26.955 486 297 11 6 456 2 464 5.27e-46 166
Msa0566090 MtrunA17_Chr8g0334851 28.662 471 284 12 10 446 6 458 6.23e-46 166
Msa0566090 MtrunA17_Chr3g0106251 38.868 265 142 8 202 460 46 296 7.12e-46 162
Msa0566090 MtrunA17_Chr6g0462551 35.764 288 169 8 167 446 174 453 9.29e-46 165
Msa0566090 MtrunA17_Chr8g0336651 29.615 493 286 14 4 458 775 1244 1.30e-45 170
Msa0566090 MtrunA17_Chr8g0336651 28.041 485 288 14 8 456 4 463 6.08e-42 159
Msa0566090 MtrunA17_Chr8g0336651 33.942 274 144 7 192 458 532 775 2.79e-35 139
Msa0566090 MtrunA17_Chr4g0072771 27.056 462 298 11 9 454 24 462 2.87e-45 164
Msa0566090 MtrunA17_Chr8g0336691 29.268 492 287 14 4 458 913 1380 3.67e-45 169
Msa0566090 MtrunA17_Chr8g0336691 27.721 487 293 14 8 458 11 474 1.77e-42 161
Msa0566090 MtrunA17_Chr8g0336691 28.810 479 278 15 4 458 474 913 8.00e-42 159
Msa0566090 MtrunA17_Chr7g0243781 28.858 499 288 19 3 458 2 476 4.27e-45 164
Msa0566090 MtrunA17_Chr8g0336741 28.571 490 287 14 6 458 9 472 7.98e-45 163
Msa0566090 MtrunA17_Chr4g0066131 26.061 495 306 13 2 459 5 476 1.89e-44 162
Msa0566090 MtrunA17_Chr7g0265051 28.942 501 284 22 9 459 8 486 2.54e-44 162
Msa0566090 MtrunA17_Chr7g0232341 26.994 489 298 14 6 458 2 467 3.32e-44 161
Msa0566090 MtrunA17_Chr4g0072761 27.171 449 295 11 9 446 14 441 3.92e-44 160
Msa0566090 MtrunA17_Chr6g0462571 27.234 470 284 17 11 446 5 450 4.41e-44 160
Msa0566090 MtrunA17_Chr8g0339451 28.398 493 275 16 13 457 1 463 4.60e-44 160
Msa0566090 MtrunA17_Chr3g0118721 31.081 296 183 8 173 457 4 289 4.76e-44 156
Msa0566090 MtrunA17_Chr4g0066201 27.386 482 297 17 9 459 17 476 6.41e-44 160
Msa0566090 MtrunA17_Chr2g0294931 27.629 485 308 16 9 460 10 484 9.15e-44 160
Msa0566090 MtrunA17_Chr1g0179901 28.460 513 281 20 1 458 7 488 9.32e-44 160
Msa0566090 MtrunA17_Chr1g0153451 26.446 484 300 12 8 458 4 464 1.18e-43 159
Msa0566090 MtrunA17_Chr8g0339631 27.181 493 294 15 6 458 2 469 2.63e-43 159
Msa0566090 MtrunA17_Chr6g0463891 27.959 490 310 14 3 458 5 485 3.41e-43 159
Msa0566090 MtrunA17_Chr5g0429711 29.400 483 280 17 10 460 11 464 3.41e-43 158
Msa0566090 MtrunA17_Chr8g0339461 28.571 483 285 16 10 453 6 467 3.69e-43 158
Msa0566090 MtrunA17_Chr5g0429681 38.112 286 143 12 186 455 230 497 4.11e-43 159
Msa0566090 MtrunA17_Chr7g0265041 29.006 493 290 19 10 457 11 488 5.79e-43 158
Msa0566090 MtrunA17_Chr5g0416741 28.106 491 306 17 3 458 6 484 1.14e-42 157
Msa0566090 MtrunA17_Chr8g0335141 27.686 484 290 15 11 458 10 469 1.21e-42 157
Msa0566090 MtrunA17_Chr8g0334831 29.555 494 277 17 11 456 7 477 1.34e-42 157
Msa0566090 MtrunA17_Chr7g0235051 29.630 486 266 19 1 450 1 446 1.71e-42 156
Msa0566090 MtrunA17_Chr8g0335161 27.178 482 296 16 10 457 6 466 3.82e-42 155
Msa0566090 MtrunA17_Chr6g0486251 28.511 470 278 17 11 445 7 453 8.36e-42 154
Msa0566090 MtrunA17_Chr6g0486201 28.511 470 278 17 11 445 7 453 8.36e-42 154
Msa0566090 MtrunA17_Chr6g0462531 27.557 479 302 14 11 460 5 467 1.09e-41 154
Msa0566090 MtrunA17_Chr8g0336731 28.423 482 286 13 12 458 34 491 1.26e-41 154
Msa0566090 MtrunA17_Chr7g0275681 29.545 484 290 19 10 457 12 480 1.38e-41 154
Msa0566090 MtrunA17_Chr8g0374971 26.220 492 302 14 9 459 11 482 1.45e-41 154
Msa0566090 MtrunA17_Chr4g0066261 28.106 491 288 16 13 459 14 483 1.82e-41 154
Msa0566090 MtrunA17_Chr6g0454271 30.796 289 186 7 175 457 6 286 2.05e-41 149
Msa0566090 MtrunA17_Chr6g0454251 29.545 396 239 14 10 372 7 395 2.19e-41 152
Msa0566090 MtrunA17_Chr5g0419761 27.823 496 301 22 5 457 4 485 3.49e-41 153
Msa0566090 MtrunA17_Chr1g0159551 26.623 462 303 12 15 459 19 461 5.35e-41 152
Msa0566090 MtrunA17_Chr7g0243851 29.106 481 280 18 1 458 1 443 6.66e-41 152
Msa0566090 MtrunA17_Chr6g0463851 26.008 496 293 18 13 459 14 484 9.78e-41 152
Msa0566090 MtrunA17_Chr5g0440421 26.962 497 319 14 1 457 1 493 1.18e-40 152
Msa0566090 MtrunA17_Chr7g0232311 27.755 490 288 14 1 454 1 460 1.70e-40 150
Msa0566090 MtrunA17_Chr4g0066281 26.559 497 293 18 1 459 6 468 4.44e-40 150
Msa0566090 MtrunA17_Chr5g0428081 27.824 478 304 16 13 459 14 481 4.46e-40 150
Msa0566090 MtrunA17_Chr6g0463861 27.216 485 292 16 13 459 14 475 1.05e-39 149
Msa0566090 MtrunA17_Chr2g0294921 26.489 487 309 17 9 459 159 632 1.50e-39 150
Msa0566090 MtrunA17_Chr3g0079731 26.453 499 302 13 1 455 1 478 2.11e-39 148
Msa0566090 MtrunA17_Chr8g0374901 27.530 494 283 18 13 459 15 480 2.19e-39 148
Msa0566090 MtrunA17_Chr6g0459311 27.331 472 281 17 11 445 14 460 2.39e-39 148
Msa0566090 MtrunA17_Chr6g0462521 31.212 330 187 9 146 459 147 452 4.20e-39 147
Msa0566090 MtrunA17_Chr1g0173121 26.371 474 300 15 11 459 15 464 5.99e-39 146
Msa0566090 MtrunA17_Chr5g0416821 26.585 489 305 16 3 458 7 474 6.58e-39 147
Msa0566090 MtrunA17_Chr4g0044481 28.929 439 249 14 10 423 27 427 7.10e-39 145
Msa0566090 MtrunA17_Chr6g0454221 35.922 206 122 4 255 456 30 229 8.42e-39 142
Msa0566090 MtrunA17_Chr8g0374941 27.033 492 292 18 13 460 952 1420 9.34e-39 150
Msa0566090 MtrunA17_Chr8g0374941 26.271 472 281 19 13 440 14 462 1.44e-32 131
Msa0566090 MtrunA17_Chr8g0374941 26.134 463 291 13 13 439 479 926 1.85e-32 131
Msa0566090 MtrunA17_Chr8g0374931 25.615 488 302 18 14 459 15 483 1.50e-38 146
Msa0566090 MtrunA17_Chr8g0350881 26.749 486 309 15 9 460 11 483 1.63e-38 145
Msa0566090 MtrunA17_Chr4g0011051 27.565 497 295 17 9 457 8 487 3.60e-38 145
Msa0566090 MtrunA17_Chr4g0042931 27.959 490 282 22 9 458 6 464 3.71e-38 144
Msa0566090 MtrunA17_Chr8g0334861 30.400 375 210 10 113 456 108 462 3.92e-38 144
Msa0566090 MtrunA17_Chr5g0410941 26.132 486 308 15 9 459 22 491 3.95e-38 145
Msa0566090 MtrunA17_Chr6g0462541 30.625 320 184 10 146 446 152 452 4.90e-38 144
Msa0566090 MtrunA17_Chr5g0420801 26.639 488 294 15 6 459 3 460 5.32e-38 144
Msa0566090 MtrunA17_Chr8g0382021 24.742 485 292 15 15 459 39 490 5.35e-38 144
Msa0566090 MtrunA17_Chr5g0442561 26.069 491 293 14 10 455 5 470 1.33e-37 143
Msa0566090 MtrunA17_Chr5g0431431 30.993 413 207 14 1 409 1 339 1.76e-37 140
Msa0566090 MtrunA17_Chr7g0243711 33.840 263 153 6 211 458 61 317 7.96e-37 137
Msa0566090 MtrunA17_Chr7g0265151 27.126 494 309 18 3 457 2 483 1.04e-36 140
Msa0566090 MtrunA17_Chr8g0361411 25.268 467 309 15 10 457 8 453 3.10e-36 139
Msa0566090 MtrunA17_Chr6g0454171 30.650 323 177 13 142 454 21 306 4.49e-36 135
Msa0566090 MtrunA17_Chr8g0339601 31.579 323 174 9 165 458 27 331 7.07e-36 135
Msa0566090 MtrunA17_Chr4g0066171 24.370 476 318 13 9 459 20 478 1.45e-35 137
Msa0566090 MtrunA17_Chr7g0241781 27.214 463 282 16 3 451 2 423 3.23e-35 135
Msa0566090 MtrunA17_Chr5g0442601 25.641 507 289 17 5 455 399 873 3.55e-35 139
Msa0566090 MtrunA17_Chr5g0442601 31.884 138 72 2 264 383 189 322 4.65e-16 80.9
Msa0566090 MtrunA17_Chr4g0042891 31.875 320 165 13 167 458 172 466 7.31e-35 135
Msa0566090 MtrunA17_Chr5g0442521 24.797 492 299 14 11 455 6 473 9.02e-35 135
Msa0566090 MtrunA17_Chr7g0265111 27.655 499 300 16 7 460 36 518 1.06e-34 135
Msa0566090 MtrunA17_Chr7g0241801 26.829 451 255 18 3 429 2 401 1.07e-34 134
Msa0566090 MtrunA17_Chr8g0370941 25.000 512 290 17 10 456 8 490 1.10e-34 135
Msa0566090 MtrunA17_Chr8g0355221 25.251 499 299 18 9 458 14 487 1.62e-34 135
Msa0566090 MtrunA17_Chr5g0442541 26.008 496 280 15 10 455 5 463 2.54e-34 134
Msa0566090 MtrunA17_Chr5g0442491 25.600 500 286 16 10 455 5 472 3.12e-34 134
Msa0566090 MtrunA17_Chr5g0448521 25.000 488 281 16 9 446 4 456 1.36e-33 132
Msa0566090 MtrunA17_Chr2g0307961 25.462 487 307 16 3 457 6 468 1.81e-33 131
Msa0566090 MtrunA17_Chr7g0218311 25.251 499 297 18 9 459 15 485 2.00e-33 131
Msa0566090 MtrunA17_Chr8g0369341 26.369 493 299 17 6 459 3 470 3.01e-33 130
Msa0566090 MtrunA17_Chr1g0165701 26.220 492 300 19 9 458 14 484 3.28e-33 131
Msa0566090 MtrunA17_Chr5g0403641 31.646 316 173 8 164 450 194 495 4.36e-33 131
Msa0566090 MtrunA17_Chr2g0329111 26.962 497 311 17 1 460 1 482 1.30e-32 129
Msa0566090 MtrunA17_Chr1g0153461 34.286 210 123 3 264 458 4 213 1.36e-32 123
Msa0566090 MtrunA17_Chr5g0442581 24.847 491 303 15 10 455 5 474 4.77e-32 128
Msa0566090 MtrunA17_Chr1g0207881 41.844 141 80 1 321 459 246 386 5.63e-32 126
Msa0566090 MtrunA17_Chr1g0207881 29.032 279 161 8 9 276 7 259 7.43e-27 111
Msa0566090 MtrunA17_Chr8g0336251 27.902 491 282 18 8 458 5 463 5.75e-32 127
Msa0566090 MtrunA17_Chr8g0336321 28.138 494 277 19 8 458 5 463 9.19e-32 126
Msa0566090 MtrunA17_Chr8g0355011 26.230 366 197 10 110 454 45 358 9.61e-32 124
Msa0566090 MtrunA17_Chr8g0339441 34.272 213 122 4 264 458 218 430 2.54e-31 125
Msa0566090 MtrunA17_Chr7g0243911 35.122 205 122 4 257 453 15 216 7.72e-31 118
Msa0566090 MtrunA17_Chr2g0294941 27.374 358 218 13 113 440 17 362 1.56e-30 121
Msa0566090 MtrunA17_Chr5g0409591 25.466 483 272 16 8 430 2 456 2.50e-30 122
Msa0566090 MtrunA17_Chr6g0454371 35.838 173 101 4 289 457 4 170 3.36e-30 115
Msa0566090 MtrunA17_Chr7g0243611 38.208 212 117 7 209 409 80 288 3.43e-30 119
Msa0566090 MtrunA17_Chr5g0442511 25.257 487 285 17 10 458 49 494 1.09e-28 118
Msa0566090 MtrunA17_Chr7g0231631 32.028 281 152 11 196 458 1 260 5.62e-28 112
Msa0566090 MtrunA17_Chr8g0367221 25.911 494 303 18 1 459 1281 1746 7.13e-28 117
Msa0566090 MtrunA17_Chr8g0367221 24.473 474 284 20 5 437 7 447 2.96e-26 112
Msa0566090 MtrunA17_Chr8g0367221 26.496 468 283 20 5 437 793 1234 4.17e-25 109
Msa0566090 MtrunA17_Chr6g0482061 24.138 493 307 18 10 458 11 480 1.01e-27 115
Msa0566090 MtrunA17_Chr7g0243811 28.224 411 233 18 22 399 1 382 1.51e-27 113
Msa0566090 MtrunA17_Chr2g0302961 24.194 496 303 17 7 459 2 467 1.76e-27 114
Msa0566090 MtrunA17_Chr2g0302991 24.694 490 305 17 7 459 2 464 2.07e-27 114
Msa0566090 MtrunA17_Chr3g0079711 34.783 184 102 4 290 455 3 186 3.82e-27 107
Msa0566090 MtrunA17_Chr4g0029131 24.477 478 279 17 2 438 4 440 4.76e-27 114
Msa0566090 MtrunA17_Chr4g0040711 25.721 451 300 15 6 437 4 438 2.49e-26 110
Msa0566090 MtrunA17_Chr8g0336261 39.850 133 70 4 289 417 4 130 2.92e-26 103
Msa0566090 MtrunA17_Chr5g0427571 32.707 266 163 8 202 458 39 297 4.41e-25 104
Msa0566090 MtrunA17_Chr7g0232351 25.735 408 230 15 6 371 2 378 6.45e-25 105
Msa0566090 MtrunA17_Chr2g0302851 23.904 456 292 14 2 430 8 435 5.31e-24 104
Msa0566090 MtrunA17_Chr2g0278721 22.727 462 297 13 2 431 7 440 6.70e-24 105
Msa0566090 MtrunA17_Chr2g0278721 23.656 465 300 15 1 431 508 951 9.99e-24 104
Msa0566090 MtrunA17_Chr6g0466831 24.153 472 325 14 2 459 10 462 7.76e-24 103
Msa0566090 MtrunA17_Chr4g0040691 25.156 481 305 16 6 459 4 456 9.94e-24 103
Msa0566090 MtrunA17_Chr4g0069611 23.465 456 280 14 9 430 14 434 1.10e-23 103
Msa0566090 MtrunA17_Chr8g0337381 37.500 128 76 2 332 458 2 126 1.32e-23 95.9
Msa0566090 MtrunA17_Chr6g0454231 28.629 248 131 7 202 446 2 206 3.54e-23 102
Msa0566090 MtrunA17_Chr6g0454231 25.217 230 147 6 10 216 250 477 3.29e-11 65.1
Msa0566090 MtrunA17_Chr1g0207911 25.926 243 166 4 9 240 7 246 1.04e-22 97.1
Msa0566090 MtrunA17_Chr2g0283041 23.810 483 296 17 10 457 7 452 1.49e-22 99.8
Msa0566090 MtrunA17_Chr6g0466841 24.379 443 306 13 2 430 10 437 2.64e-22 99.4
Msa0566090 MtrunA17_Chr2g0278741 22.944 462 294 15 3 431 90 522 5.57e-22 99.0
Msa0566090 MtrunA17_Chr2g0319801 25.983 458 288 17 7 437 5 438 9.24e-22 97.4
Msa0566090 MtrunA17_Chr1g0196851 24.094 469 281 18 9 438 48 480 9.80e-22 97.8
Msa0566090 MtrunA17_Chr2g0319761 25.000 492 284 21 9 458 7 455 5.46e-21 95.1
Msa0566090 MtrunA17_Chr6g0464091 23.673 452 293 15 9 431 17 445 1.34e-20 94.4
Msa0566090 MtrunA17_Chr7g0249971 45.238 84 42 1 6 89 7 86 3.60e-20 86.3
Msa0566090 MtrunA17_Chr8g0377911 37.681 138 77 4 11 144 8 140 7.90e-20 86.3
Msa0566090 MtrunA17_Chr8g0357361 39.259 135 79 3 264 396 118 251 8.97e-20 89.0
Msa0566090 MtrunA17_Chr2g0319791 25.107 466 278 19 9 437 7 438 1.62e-19 90.9
Msa0566090 MtrunA17_Chr2g0319731 26.237 465 278 19 7 437 22 455 1.63e-19 90.9
Msa0566090 MtrunA17_Chr4g0029151 31.016 187 112 6 266 438 265 448 3.99e-19 89.7
Msa0566090 MtrunA17_Chr2g0319751 24.576 472 277 18 9 439 484 917 1.78e-18 88.6
Msa0566090 MtrunA17_Chr4g0066141 31.210 157 97 3 313 458 196 352 2.76e-18 86.3
Msa0566090 MtrunA17_Chr3g0092031 30.539 167 113 3 266 430 6 171 4.08e-18 82.8
Msa0566090 MtrunA17_Chr4g0039881 26.957 230 157 6 205 430 189 411 2.22e-17 84.3
Msa0566090 MtrunA17_Chr6g0453981 32.620 187 112 7 150 329 48 227 1.10e-16 79.3
Msa0566090 MtrunA17_Chr6g0453941 24.675 308 162 10 10 309 11 256 8.22e-15 74.7
Msa0566090 MtrunA17_Chr5g0426411 30.061 163 102 6 4 157 6 165 1.07e-14 72.0
Msa0566090 MtrunA17_Chr5g0442501 25.806 310 202 10 11 307 6 300 3.86e-14 73.2
Msa0566090 MtrunA17_Chr8g0336271 26.721 247 146 11 4 224 7 244 1.70e-13 70.9
Msa0566090 MtrunA17_Chr7g0243731 42.308 78 44 1 325 401 1 78 3.04e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0566090 AT2G43840.2 52.863 454 196 7 10 458 7 447 1.08e-171 490
Msa0566090 AT2G43840.1 52.643 454 197 7 10 458 7 447 1.09e-170 487
Msa0566090 AT2G43820.1 51.404 463 204 8 1 458 1 447 1.27e-167 479
Msa0566090 AT2G31790.1 44.298 456 239 6 10 457 8 456 3.41e-135 397
Msa0566090 AT1G05675.1 44.568 451 239 5 10 455 6 450 1.54e-133 393
Msa0566090 AT1G05680.1 44.323 458 230 7 10 455 6 450 8.86e-133 391
Msa0566090 AT2G31750.1 43.534 464 243 9 5 459 3 456 3.15e-122 364
Msa0566090 AT2G31750.2 43.656 465 243 9 5 460 3 457 4.49e-122 365
Msa0566090 AT1G24100.1 40.781 461 251 10 10 459 11 460 2.83e-112 339
Msa0566090 AT4G15480.1 34.402 468 281 8 9 457 18 478 1.38e-104 320
Msa0566090 AT3G21560.1 36.501 463 277 8 10 457 12 472 8.43e-103 316
Msa0566090 AT4G15490.1 35.924 476 268 14 6 457 4 466 2.10e-101 311
Msa0566090 AT4G15550.1 35.597 486 248 13 10 456 13 472 8.28e-94 292
Msa0566090 AT1G05560.1 35.470 468 261 10 10 457 5 451 3.92e-93 290
Msa0566090 AT4G15500.1 34.549 466 289 9 3 457 2 462 3.96e-93 290
Msa0566090 AT1G05560.2 35.158 475 267 10 3 457 48 501 7.35e-93 291
Msa0566090 AT1G05530.1 36.364 462 268 9 10 457 5 454 4.87e-92 286
Msa0566090 AT4G14090.1 36.876 461 258 12 10 456 13 454 3.67e-88 276
Msa0566090 AT2G23260.1 33.974 468 283 12 1 457 1 453 1.41e-84 267
Msa0566090 AT2G23250.1 34.071 452 274 10 13 457 1 435 2.56e-82 261
Msa0566090 AT1G22360.1 33.058 484 280 15 6 457 6 477 2.76e-78 252
Msa0566090 AT1G22400.1 32.919 483 283 16 6 457 9 481 2.45e-76 247
Msa0566090 AT1G22380.1 33.125 480 277 17 10 457 13 480 4.26e-72 236
Msa0566090 AT1G22360.2 31.818 484 274 15 6 457 6 465 1.23e-70 231
Msa0566090 AT1G22340.1 32.008 478 286 12 10 457 13 481 8.91e-70 230
Msa0566090 AT1G78270.1 31.098 492 292 14 1 457 1 480 1.42e-64 216
Msa0566090 AT1G22370.2 32.773 476 279 16 10 457 13 475 2.53e-64 215
Msa0566090 AT2G36970.1 28.719 484 306 12 1 458 1 471 2.17e-63 213
Msa0566090 AT5G59590.1 29.916 478 285 13 1 457 1 449 9.25e-62 207
Msa0566090 AT3G02100.1 28.953 487 281 14 4 458 7 460 8.13e-59 200
Msa0566090 AT5G38010.1 29.747 474 295 13 1 457 1 453 1.61e-58 199
Msa0566090 AT3G46670.1 31.950 482 268 15 3 458 2 449 1.87e-58 199
Msa0566090 AT2G28080.1 28.139 462 302 10 14 457 22 471 2.80e-58 199
Msa0566090 AT2G30140.2 30.769 468 274 16 10 457 13 450 3.02e-58 198
Msa0566090 AT5G59580.1 30.704 469 276 14 10 458 9 448 3.28e-58 198
Msa0566090 AT2G30140.1 30.490 469 275 16 10 457 13 451 1.22e-57 197
Msa0566090 AT2G15480.1 27.992 493 306 14 1 457 1 480 2.13e-57 197
Msa0566090 AT3G46660.1 30.252 476 286 12 3 458 7 456 2.39e-57 196
Msa0566090 AT2G15490.3 28.099 484 301 14 9 457 6 477 3.37e-56 194
Msa0566090 AT2G15490.1 28.131 487 300 14 9 457 6 480 2.06e-55 192
Msa0566090 AT2G15480.2 27.634 503 305 16 1 457 1 490 1.37e-54 190
Msa0566090 AT2G30150.2 27.292 469 295 12 10 459 13 454 5.81e-54 187
Msa0566090 AT5G38040.1 31.290 473 285 14 1 457 1 449 1.60e-53 186
Msa0566090 AT5G05870.1 29.622 476 288 14 5 457 3 454 5.35e-53 185
Msa0566090 AT5G17050.1 28.238 471 289 12 10 457 12 456 2.10e-52 183
Msa0566090 AT2G30150.1 27.097 465 293 12 14 459 1 438 3.15e-52 182
Msa0566090 AT5G05880.1 30.573 471 280 16 5 455 3 446 2.33e-51 180
Msa0566090 AT5G14860.1 28.916 498 288 16 6 460 4 478 3.46e-51 181
Msa0566090 AT3G46650.1 28.821 458 291 14 1 453 1 428 4.08e-51 179
Msa0566090 AT1G10400.1 28.092 477 295 14 9 455 6 464 3.19e-50 177
Msa0566090 AT1G01420.1 30.271 479 285 15 10 458 8 467 4.00e-50 177
Msa0566090 AT1G01420.2 30.271 479 285 15 10 458 11 470 4.70e-50 177
Msa0566090 AT4G34138.1 31.161 491 278 21 7 457 8 478 9.22e-50 177
Msa0566090 AT3G46700.1 28.723 470 295 12 3 458 2 445 6.64e-49 173
Msa0566090 AT4G34131.1 29.630 486 290 18 9 457 9 479 7.85e-49 174
Msa0566090 AT3G46680.1 28.692 474 289 17 1 455 4 447 9.73e-49 173
Msa0566090 AT5G05860.1 28.099 484 281 14 3 457 2 447 1.26e-48 173
Msa0566090 AT3G46690.1 28.000 475 295 14 3 457 2 449 2.15e-48 172
Msa0566090 AT3G11340.1 27.195 467 301 14 1 454 1 441 5.08e-48 171
Msa0566090 AT5G17040.1 26.164 451 318 5 10 459 5 441 1.07e-47 170
Msa0566090 AT2G16890.2 28.898 481 293 14 10 460 9 470 1.28e-47 171
Msa0566090 AT2G26480.1 27.802 464 293 13 10 457 8 445 3.93e-47 169
Msa0566090 AT4G01070.1 26.804 485 297 13 1 451 1 461 1.81e-46 167
Msa0566090 AT2G36800.1 29.592 490 293 18 2 451 4 481 1.09e-45 166
Msa0566090 AT5G05900.1 29.053 475 281 16 5 455 3 445 2.38e-45 164
Msa0566090 AT1G30530.1 27.692 455 293 11 16 457 19 450 2.59e-45 164
Msa0566090 AT2G36750.1 29.132 484 287 19 9 451 9 477 8.23e-45 163
Msa0566090 AT1G22370.1 34.983 303 174 9 167 457 14 305 9.59e-45 159
Msa0566090 AT3G16520.3 31.624 351 213 11 111 446 113 451 5.20e-44 160
Msa0566090 AT3G16520.2 32.164 342 205 11 111 437 113 442 6.94e-44 160
Msa0566090 AT3G16520.1 32.164 342 205 11 111 437 113 442 9.06e-44 160
Msa0566090 AT2G36770.1 28.484 488 286 17 9 451 13 482 1.72e-43 160
Msa0566090 AT3G46720.1 28.361 476 285 14 3 458 2 441 1.83e-43 159
Msa0566090 AT5G17030.1 25.000 464 312 11 10 457 12 455 1.37e-42 157
Msa0566090 AT1G01390.1 28.157 483 301 14 5 458 3 468 1.43e-42 157
Msa0566090 AT1G01390.2 28.157 483 301 14 5 458 20 485 1.90e-42 157
Msa0566090 AT4G34135.1 27.743 483 304 13 9 457 10 481 1.92e-42 157
Msa0566090 AT2G29740.1 29.209 493 288 19 5 457 3 474 9.23e-42 155
Msa0566090 AT3G55700.1 28.361 476 296 14 1 457 1 450 1.28e-41 154
Msa0566090 AT3G22250.1 27.376 442 279 12 11 426 9 434 1.46e-41 154
Msa0566090 AT5G05890.1 27.349 479 289 13 5 455 3 450 1.68e-41 154
Msa0566090 AT2G36760.1 26.569 478 306 12 9 450 13 481 3.00e-41 154
Msa0566090 AT1G73880.1 25.261 479 317 15 2 457 6 466 5.55e-41 152
Msa0566090 AT3G50740.1 28.717 491 291 16 5 456 2 472 7.22e-41 152
Msa0566090 AT2G36790.1 30.146 481 287 18 9 451 12 481 1.07e-40 152
Msa0566090 AT3G55710.1 30.021 483 283 22 1 457 1 454 1.08e-40 152
Msa0566090 AT5G26310.1 28.419 468 285 19 10 446 7 455 2.05e-40 151
Msa0566090 AT5G17040.2 30.137 292 190 4 169 459 61 339 2.27e-40 148
Msa0566090 AT3G21790.1 27.219 507 286 18 9 460 3 481 2.73e-40 151
Msa0566090 AT2G16890.3 28.868 433 264 12 10 415 9 424 3.41e-40 149
Msa0566090 AT2G36780.1 28.226 496 279 18 8 451 12 482 6.97e-40 150
Msa0566090 AT3G53150.1 27.525 505 290 17 5 451 17 503 2.46e-39 149
Msa0566090 AT3G53160.1 28.803 493 290 21 9 457 7 482 3.11e-39 148
Msa0566090 AT5G66690.1 27.778 486 292 17 10 459 7 469 5.59e-39 147
Msa0566090 AT5G03490.1 27.521 476 289 19 10 459 19 464 1.19e-38 146
Msa0566090 AT3G21800.1 26.775 493 296 14 11 459 6 477 7.00e-38 144
Msa0566090 AT3G21750.1 25.971 489 299 13 9 457 3 468 1.41e-37 143
Msa0566090 AT1G07250.1 28.247 485 293 17 10 457 6 472 1.78e-37 143
Msa0566090 AT4G15280.2 26.786 504 293 19 3 457 29 505 3.51e-37 143
Msa0566090 AT4G15280.1 27.108 498 287 19 9 457 3 473 5.98e-37 141
Msa0566090 AT1G07260.1 27.835 485 300 16 7 457 3 471 1.34e-36 140
Msa0566090 AT4G36770.1 26.205 477 276 13 9 441 3 447 4.87e-36 139
Msa0566090 AT3G21760.1 26.400 500 301 15 9 460 3 483 6.22e-36 139
Msa0566090 AT2G29730.1 26.216 473 307 14 8 454 3 459 1.21e-35 138
Msa0566090 AT4G15260.1 34.155 284 149 10 198 457 85 354 4.64e-34 131
Msa0566090 AT3G21780.1 26.653 484 302 19 9 457 3 468 1.36e-33 132
Msa0566090 AT4G27570.1 26.452 465 301 16 9 458 6 444 5.19e-33 130
Msa0566090 AT2G18570.1 26.946 501 272 21 10 456 5 465 5.87e-33 130
Msa0566090 AT2G29710.1 27.615 478 296 18 10 457 5 462 1.05e-32 129
Msa0566090 AT4G27560.1 25.957 470 297 16 9 458 6 444 2.11e-32 128
Msa0566090 AT2G18560.1 30.961 281 153 9 201 456 111 375 2.18e-32 127
Msa0566090 AT5G49690.1 26.569 478 303 18 1 459 1 449 4.75e-32 127
Msa0566090 AT3G29630.1 24.464 466 313 17 7 457 3 444 9.01e-32 127
Msa0566090 AT1G06000.1 26.271 472 276 18 10 457 10 433 4.14e-31 124
Msa0566090 AT1G51210.1 27.517 447 276 20 4 431 14 431 1.93e-30 122
Msa0566090 AT5G54010.1 26.891 476 292 21 7 459 3 445 3.26e-30 122
Msa0566090 AT2G29750.1 26.931 505 283 22 5 457 3 473 3.40e-30 122
Msa0566090 AT1G07240.1 24.286 490 314 15 8 457 3 475 6.75e-30 122
Msa0566090 AT5G12890.1 24.900 498 314 16 1 456 1 480 6.61e-29 119
Msa0566090 AT3G29630.2 25.758 462 286 18 7 457 3 418 8.07e-29 118
Msa0566090 AT2G22590.1 26.522 460 278 18 6 431 11 444 1.57e-28 117
Msa0566090 AT1G50580.1 24.026 462 308 15 6 451 2 436 4.65e-28 116
Msa0566090 AT5G53990.1 24.622 463 311 14 7 458 3 438 4.87e-28 116
Msa0566090 AT2G23210.1 30.769 273 167 9 10 274 10 268 5.21e-28 113
Msa0566090 AT5G65550.1 24.561 456 280 18 9 429 8 434 1.52e-27 115
Msa0566090 AT5G54060.1 26.403 481 300 21 5 457 8 462 2.85e-27 114
Msa0566090 AT1G64910.1 23.718 468 316 17 8 459 4 446 1.00e-26 112
Msa0566090 AT5G37950.1 28.255 361 231 10 25 373 1 345 3.05e-26 109
Msa0566090 AT5G37950.2 28.134 359 228 10 25 373 1 339 3.38e-26 109
Msa0566090 AT2G22930.1 22.462 463 321 14 8 459 4 439 4.40e-26 110
Msa0566090 AT1G64920.1 23.881 469 307 18 9 458 5 442 3.53e-25 107
Msa0566090 AT4G09500.2 22.366 465 319 15 9 460 5 440 3.32e-23 102
Msa0566090 AT4G01070.2 27.778 324 199 11 1 309 1 304 2.08e-21 95.5
Msa0566090 AT4G09500.1 22.343 461 299 15 9 460 5 415 9.91e-20 91.7
Msa0566090 AT4G34135.2 25.460 326 208 9 9 309 10 325 2.07e-19 89.7

Find 114 sgRNAs with CRISPR-Local

Find 321 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGAATGATATCTGCTTTA+TGG 0.101976 4_1:-67079351 None:intergenic
AATGAGTTCCTTCAAATTCT+TGG 0.176613 4_1:-67079026 None:intergenic
GAAATAGCATTAGGATTATT+AGG 0.226331 4_1:+67080319 Msa0566090:CDS
ACTAATGTTAATATGTATTA+TGG 0.235132 4_1:+67080826 Msa0566090:three_prime_UTR
TAGATTCATCACCCATTAAT+TGG 0.239374 4_1:+67080218 Msa0566090:CDS
CTTATGGGTAATCCCTAATA+TGG 0.251252 4_1:+67080357 Msa0566090:CDS
GAAGTGGTTCAAATTTCTTA+TGG 0.275041 4_1:+67080341 Msa0566090:CDS
GTTGGCCCAATTGTCAATAT+TGG 0.291942 4_1:-67080127 None:intergenic
AACTCCCTTGTCCAAGTAAA+AGG 0.294421 4_1:-67080158 None:intergenic
AAATCATTGTCTTTGTCATT+TGG 0.294805 4_1:-67080181 None:intergenic
AATATTGGAGTCCTTGGATT+TGG 0.299741 4_1:+67080878 Msa0566090:three_prime_UTR
TCCTAGTAAGTCAAATTCTT+TGG 0.311601 4_1:-67079125 None:intergenic
GGAAGCCCTGGCATAGAAAT+TGG 0.312817 4_1:-67079235 None:intergenic
ACACTTGAAGCATTGTGTTT+AGG 0.320691 4_1:+67080520 Msa0566090:CDS
AATTTAGAGAACTGAATATA+TGG 0.325289 4_1:-67078687 None:intergenic
ATACATATTAACATTAGTTT+AGG 0.330674 4_1:-67080821 None:intergenic
GTATTTGTTTCAATTAATAT+TGG 0.341588 4_1:+67080863 Msa0566090:three_prime_UTR
CTTGTGCTTGTATCAATAAT+AGG 0.352941 4_1:+67078716 Msa0566090:five_prime_UTR
TCAGCTATTTATGTATCATT+TGG 0.358377 4_1:+67080262 Msa0566090:CDS
TGATTGGAGATGCATGGTTT+TGG 0.361111 4_1:-67078888 None:intergenic
CTTCAAATTCTTGGAGCCTA+TGG 0.363594 4_1:-67079017 None:intergenic
TCAATTAATATTGGAGTCCT+TGG 0.374516 4_1:+67080872 Msa0566090:three_prime_UTR
AAGTGGTTCAAATTTCTTAT+GGG 0.377984 4_1:+67080342 Msa0566090:CDS
TCATATACTACACAATCTAT+AGG 0.379795 4_1:-67079073 None:intergenic
AAGAGATTGAGAGTTGCATT+AGG 0.380560 4_1:+67080662 Msa0566090:CDS
GTTCTATCTAACAAAGCTAT+TGG 0.386677 4_1:+67080466 Msa0566090:CDS
GAAATTGGCATTGAAGATAT+AGG 0.387888 4_1:-67079220 None:intergenic
GAAATGAGTTCAAGTGGAAA+AGG 0.388516 4_1:+67080412 Msa0566090:CDS
ATCAATAATAGGAAAGGAAA+TGG 0.391481 4_1:+67078727 Msa0566090:exon
ACATAAATAGCTGACCCTTC+AGG 0.395070 4_1:-67080253 None:intergenic
TTTGAATTCAGCCAATTAAT+GGG 0.400775 4_1:-67080229 None:intergenic
GAAAAGGGTTGGTAGTGAAT+TGG 0.401038 4_1:+67080428 Msa0566090:CDS
TCCAAAACCCATTGAAGAAA+AGG 0.404165 4_1:-67079097 None:intergenic
CTATGTCCAATATTGACAAT+TGG 0.407942 4_1:+67080121 Msa0566090:CDS
TGAAAATTAATGCTAAGAAA+TGG 0.408124 4_1:+67080716 Msa0566090:CDS
TGCTAAGAAATGGAGAGAAT+TGG 0.423410 4_1:+67080726 Msa0566090:CDS
AGAGTTAAGGTAAATGAGAA+TGG 0.425016 4_1:+67080625 Msa0566090:CDS
CAAATGAAGGAAATAGCATT+AGG 0.428452 4_1:+67080310 Msa0566090:CDS
CATATACTACACAATCTATA+GGG 0.430640 4_1:-67079072 None:intergenic
AGCAAACGTTTGAGCACAAA+AGG 0.432736 4_1:+67078830 Msa0566090:CDS
TATGTCCAATATTGACAATT+GGG 0.442133 4_1:+67080122 Msa0566090:CDS
CCTTCCTTTGTTTATGACCC+TGG 0.449807 4_1:+67079280 Msa0566090:CDS
CGTTTGCTGAATTGAAGCAT+TGG 0.459472 4_1:-67078815 None:intergenic
AGAACTGAATATATGGTTTG+AGG 0.462913 4_1:-67078680 None:intergenic
CAATTTGACTTCATATCTGA+TGG 0.466660 4_1:+67078932 Msa0566090:CDS
GTTTGCTGAATTGAAGCATT+GGG 0.469700 4_1:-67078814 None:intergenic
TTGAAGGTAAGGATGATGAT+TGG 0.473871 4_1:-67078904 None:intergenic
AAGTCAAATTGAAGGGTTGA+AGG 0.475531 4_1:-67078920 None:intergenic
ATGTGACCTTGACTTGGGTA+TGG 0.475859 4_1:-67078788 None:intergenic
TTATGTATCATTTGGAAGCA+TGG 0.479963 4_1:+67080270 Msa0566090:CDS
GGGTTTATGTGACCTTGACT+TGG 0.481353 4_1:-67078794 None:intergenic
TCAATGCCAATTTCTATGCC+AGG 0.483097 4_1:+67079229 Msa0566090:CDS
CAGATATGAAGTCAAATTGA+AGG 0.488866 4_1:-67078928 None:intergenic
AAATTGAAGGGTTGAAGGTA+AGG 0.491787 4_1:-67078915 None:intergenic
ATTGAAGAAATGAGTTCAAG+TGG 0.492000 4_1:+67080406 Msa0566090:CDS
CTGGTCTTCTAGCTTGTAGA+AGG 0.493156 4_1:-67079380 None:intergenic
CTTCTACAAGCTAGAAGACC+AGG 0.493515 4_1:+67079381 Msa0566090:CDS
GGTTGCTTTCTAACACATAG+TGG 0.494765 4_1:+67080487 Msa0566090:CDS
GCATTAGGATTATTAGGAAG+TGG 0.500366 4_1:+67080325 Msa0566090:CDS
CATAGGCTCCAAGAATTTGA+AGG 0.504127 4_1:+67079018 Msa0566090:CDS
GTTGAGGATGTGTGGAAAGT+GGG 0.506952 4_1:+67080598 Msa0566090:CDS
GAAAGTGGGAATGAGAGTTA+AGG 0.512272 4_1:+67080612 Msa0566090:CDS
TAGTAAGCAGGATAGAAGCC+AGG 0.514306 4_1:-67079298 None:intergenic
GAAGCACCACCACTTACATA+AGG 0.516098 4_1:-67080925 None:intergenic
GCCAAAGAATTTGACTTACT+AGG 0.518520 4_1:+67079124 Msa0566090:CDS
CTATCCTGCTTACTATGAGA+TGG 0.519933 4_1:+67079306 Msa0566090:CDS
TGTTGAGGATGTGTGGAAAG+TGG 0.525190 4_1:+67080597 Msa0566090:CDS
CCAAAACCCATTGAAGAAAA+GGG 0.527692 4_1:-67079096 None:intergenic
AAATGAGTTCAAGTGGAAAA+GGG 0.528479 4_1:+67080413 Msa0566090:CDS
AAAGTGATGGAAAATGACAT+TGG 0.536596 4_1:+67080685 Msa0566090:CDS
ATTGTGTTTAGGAGTGCCTA+TGG 0.537967 4_1:+67080531 Msa0566090:CDS
GAGTTAAGGTAAATGAGAAT+GGG 0.543847 4_1:+67080626 Msa0566090:CDS
AGATCAAGCAAAGGAAGCCC+TGG 0.546518 4_1:-67079247 None:intergenic
CCAGGGTCATAAACAAAGGA+AGG 0.547762 4_1:-67079280 None:intergenic
ATGTATTATTATGTTTACCA+TGG 0.551919 4_1:+67079184 Msa0566090:CDS
GGTTTATGTGACCTTGACTT+GGG 0.551938 4_1:-67078793 None:intergenic
ATATCTGATGGCTATGATGA+AGG 0.556777 4_1:+67078944 Msa0566090:CDS
CAATGCCAATTTCTATGCCA+GGG 0.557141 4_1:+67079230 Msa0566090:CDS
CCCTTGTCCAAGTAAAAGGA+TGG 0.561070 4_1:-67080154 None:intergenic
CTATCTCACATGAAAACCAT+AGG 0.561539 4_1:+67079001 Msa0566090:CDS
GCTTTCTAACACATAGTGGA+TGG 0.561712 4_1:+67080491 Msa0566090:CDS
CAAAATATGTTGAGGATGTG+TGG 0.562683 4_1:+67080590 Msa0566090:CDS
TAGGAAGCTTTAAAAGTCCA+TGG 0.564480 4_1:-67079201 None:intergenic
ATAACCATCTCATAGTAAGC+AGG 0.564645 4_1:-67079310 None:intergenic
CTTTAGCATAGAGCAAATGA+AGG 0.565909 4_1:+67080297 Msa0566090:CDS
TGGCTGAATTCAAAACCTGA+AGG 0.566821 4_1:+67080238 Msa0566090:CDS
AAGTAAAAGGATGGAACTGT+TGG 0.582183 4_1:-67080145 None:intergenic
AATTTGTAAATAAGCTGAAG+AGG 0.582997 4_1:+67080797 Msa0566090:CDS
CAGGGTCATAAACAAAGGAA+GGG 0.583374 4_1:-67079279 None:intergenic
AGTAAGCAGGATAGAAGCCA+GGG 0.586536 4_1:-67079297 None:intergenic
TTGAGGTGATAATGAATGCA+TGG 0.591573 4_1:-67078663 None:intergenic
ATGGTTCCATACCCAAGTCA+AGG 0.598862 4_1:+67078782 Msa0566090:CDS
GCTTGTATCAATAATAGGAA+AGG 0.601076 4_1:+67078721 Msa0566090:five_prime_UTR
CACTGTGGTATTGCAACCAT+AGG 0.601959 4_1:-67080547 None:intergenic
AGTGAATTGGATACCACAGT+TGG 0.602235 4_1:+67080441 Msa0566090:CDS
TTATTGATACAAGCACAAGT+TGG 0.606580 4_1:-67078712 None:intergenic
GAAGGTGGCTTTGCTCAAGT+TGG 0.608792 4_1:+67078962 Msa0566090:CDS
TCTCATACAATCCAAATCCA+AGG 0.610873 4_1:-67080889 None:intergenic
AGATATGAAGTCAAATTGAA+GGG 0.612280 4_1:-67078927 None:intergenic
GGCTGAATTCAAAACCTGAA+GGG 0.614591 4_1:+67080239 Msa0566090:CDS
GGATGATGATTGGAGATGCA+TGG 0.615276 4_1:-67078894 None:intergenic
AGGGTCATAAACAAAGGAAG+GGG 0.619189 4_1:-67079278 None:intergenic
GCTATAGAAGCAGTAAGTCA+TGG 0.620556 4_1:+67080748 Msa0566090:CDS
GAGTTCAAGTGGAAAAGGGT+TGG 0.622029 4_1:+67080417 Msa0566090:CDS
TTAGATAGAACTTCCAACTG+TGG 0.627701 4_1:-67080454 None:intergenic
GAAGCCAGGGTCATAAACAA+AGG 0.633076 4_1:-67079284 None:intergenic
GAGTTGCATTAGGAAAGTGA+TGG 0.636211 4_1:+67080672 Msa0566090:CDS
AAAAGGAGTTAAAGTCACAA+TGG 0.638228 4_1:+67078847 Msa0566090:CDS
TTTGAATGCAAAATATGTTG+AGG 0.643170 4_1:+67080582 Msa0566090:CDS
TCTGATGGCTATGATGAAGG+TGG 0.677720 4_1:+67078947 Msa0566090:CDS
GTATCTTTGAGATCAAGCAA+AGG 0.699284 4_1:-67079256 None:intergenic
ATAGAAGCAGTAAGTCATGG+TGG 0.738041 4_1:+67080751 Msa0566090:CDS
AAAGGTTGATCAGTCCACTG+TGG 0.777400 4_1:-67080562 None:intergenic
CTATGGTTGCAATACCACAG+TGG 0.814711 4_1:+67080548 Msa0566090:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAATAAACAATAAATAG+AGG + chr4_1:67079556-67079575 Msa0566090:intron 10.0%
!! AAAAATAAACAATAAATAGA+GGG + chr4_1:67079557-67079576 Msa0566090:intron 10.0%
!! CTAAATTTAAATTTATTTCA+TGG + chr4_1:67079700-67079719 Msa0566090:intron 10.0%
!!! ATATTTTCTCATAATAAATA+AGG + chr4_1:67079770-67079789 Msa0566090:intron 10.0%
!! TAAAAATAAACAATAAATAG+AGG + chr4_1:67079556-67079575 Msa0566090:intron 10.0%
!! AAAAATAAACAATAAATAGA+GGG + chr4_1:67079557-67079576 Msa0566090:intron 10.0%
!! CTAAATTTAAATTTATTTCA+TGG + chr4_1:67079700-67079719 Msa0566090:intron 10.0%
!!! ATATTTTCTCATAATAAATA+AGG + chr4_1:67079770-67079789 Msa0566090:intron 10.0%
!! AAATAACTTCAAACATAATA+AGG - chr4_1:67079433-67079452 None:intergenic 15.0%
!! AATTAAGAGTAATTAATACA+GGG - chr4_1:67079729-67079748 None:intergenic 15.0%
!!! ATAAAAGTGTCAAATATTTT+TGG - chr4_1:67079858-67079877 None:intergenic 15.0%
!!! ATACATATTAACATTAGTTT+AGG - chr4_1:67080824-67080843 None:intergenic 15.0%
!! ACTAATGTTAATATGTATTA+TGG + chr4_1:67080826-67080845 Msa0566090:three_prime_UTR 15.0%
!! GTATTTGTTTCAATTAATAT+TGG + chr4_1:67080863-67080882 Msa0566090:three_prime_UTR 15.0%
!! AAATAACTTCAAACATAATA+AGG - chr4_1:67079433-67079452 None:intergenic 15.0%
!! AATTAAGAGTAATTAATACA+GGG - chr4_1:67079729-67079748 None:intergenic 15.0%
!!! ATAAAAGTGTCAAATATTTT+TGG - chr4_1:67079858-67079877 None:intergenic 15.0%
!!! ATACATATTAACATTAGTTT+AGG - chr4_1:67080824-67080843 None:intergenic 15.0%
!! ACTAATGTTAATATGTATTA+TGG + chr4_1:67080826-67080845 Msa0566090:three_prime_UTR 15.0%
!! GTATTTGTTTCAATTAATAT+TGG + chr4_1:67080863-67080882 Msa0566090:three_prime_UTR 15.0%
!! AATTTAGAGAACTGAATATA+TGG - chr4_1:67078690-67078709 None:intergenic 20.0%
!! ATGTATTATTATGTTTACCA+TGG + chr4_1:67079184-67079203 Msa0566090:CDS 20.0%
!! ACATAATAAGGAATATAAAG+AGG - chr4_1:67079421-67079440 None:intergenic 20.0%
!! GAATTAAGAGTAATTAATAC+AGG - chr4_1:67079730-67079749 None:intergenic 20.0%
!! AGAGATCATATACATATAAA+TGG - chr4_1:67079902-67079921 None:intergenic 20.0%
!!! ACCTCATATTTTAATTAATG+TGG + chr4_1:67079968-67079987 Msa0566090:intron 20.0%
!! ACCACATTAATTAAAATATG+AGG - chr4_1:67079972-67079991 None:intergenic 20.0%
!!! TATTGATAGAAACTGAATTT+TGG + chr4_1:67080019-67080038 Msa0566090:intron 20.0%
!! TTCCATATGAATGATATATA+AGG + chr4_1:67080078-67080097 Msa0566090:intron 20.0%
!!! TATTCTTTTTCTCCATATTA+GGG - chr4_1:67080372-67080391 None:intergenic 20.0%
!!! ATATTCTTTTTCTCCATATT+AGG - chr4_1:67080373-67080392 None:intergenic 20.0%
!! TGAAAATTAATGCTAAGAAA+TGG + chr4_1:67080716-67080735 Msa0566090:CDS 20.0%
!!! TATTATTTTCCTTATGTAAG+TGG + chr4_1:67080916-67080935 Msa0566090:three_prime_UTR 20.0%
!! AATTTAGAGAACTGAATATA+TGG - chr4_1:67078690-67078709 None:intergenic 20.0%
!! ATGTATTATTATGTTTACCA+TGG + chr4_1:67079184-67079203 Msa0566090:CDS 20.0%
!! ACATAATAAGGAATATAAAG+AGG - chr4_1:67079421-67079440 None:intergenic 20.0%
!! GAATTAAGAGTAATTAATAC+AGG - chr4_1:67079730-67079749 None:intergenic 20.0%
!! AGAGATCATATACATATAAA+TGG - chr4_1:67079902-67079921 None:intergenic 20.0%
!!! ACCTCATATTTTAATTAATG+TGG + chr4_1:67079968-67079987 Msa0566090:intron 20.0%
!! ACCACATTAATTAAAATATG+AGG - chr4_1:67079972-67079991 None:intergenic 20.0%
!!! TATTGATAGAAACTGAATTT+TGG + chr4_1:67080019-67080038 Msa0566090:intron 20.0%
!! TTCCATATGAATGATATATA+AGG + chr4_1:67080078-67080097 Msa0566090:intron 20.0%
!!! TATTCTTTTTCTCCATATTA+GGG - chr4_1:67080372-67080391 None:intergenic 20.0%
!!! ATATTCTTTTTCTCCATATT+AGG - chr4_1:67080373-67080392 None:intergenic 20.0%
!! TGAAAATTAATGCTAAGAAA+TGG + chr4_1:67080716-67080735 Msa0566090:CDS 20.0%
!!! TATTATTTTCCTTATGTAAG+TGG + chr4_1:67080916-67080935 Msa0566090:three_prime_UTR 20.0%
! ATCAATAATAGGAAAGGAAA+TGG + chr4_1:67078727-67078746 Msa0566090:exon 25.0%
!!! TAGTAGTATGCATGTTTTAA+TGG + chr4_1:67078763-67078782 Msa0566090:CDS 25.0%
! AGATATGAAGTCAAATTGAA+GGG - chr4_1:67078930-67078949 None:intergenic 25.0%
! CATATACTACACAATCTATA+GGG - chr4_1:67079075-67079094 None:intergenic 25.0%
! TCATATACTACACAATCTAT+AGG - chr4_1:67079076-67079095 None:intergenic 25.0%
! TAATAAGGAATATAAAGAGG+AGG - chr4_1:67079418-67079437 None:intergenic 25.0%
!!! GTGAAAGCAATTTTAATAAG+TGG - chr4_1:67079508-67079527 None:intergenic 25.0%
! AATAAACAATAAATAGAGGG+TGG + chr4_1:67079560-67079579 Msa0566090:intron 25.0%
! ATATACATATAAATGGCTCA+CGG - chr4_1:67079895-67079914 None:intergenic 25.0%
! CACCTTATATATCATTCATA+TGG - chr4_1:67080083-67080102 None:intergenic 25.0%
! CATATGAATGATATATAAGG+TGG + chr4_1:67080081-67080100 Msa0566090:intron 25.0%
! TATGTCCAATATTGACAATT+GGG + chr4_1:67080122-67080141 Msa0566090:CDS 25.0%
! AAATCATTGTCTTTGTCATT+TGG - chr4_1:67080184-67080203 None:intergenic 25.0%
! TTTGAATTCAGCCAATTAAT+GGG - chr4_1:67080232-67080251 None:intergenic 25.0%
!! TTTTGAATTCAGCCAATTAA+TGG - chr4_1:67080233-67080252 None:intergenic 25.0%
! TCAGCTATTTATGTATCATT+TGG + chr4_1:67080262-67080281 Msa0566090:CDS 25.0%
! GAAATAGCATTAGGATTATT+AGG + chr4_1:67080319-67080338 Msa0566090:CDS 25.0%
! AAGTGGTTCAAATTTCTTAT+GGG + chr4_1:67080342-67080361 Msa0566090:CDS 25.0%
!! TCAACATATTTTGCATTCAA+AGG - chr4_1:67080583-67080602 None:intergenic 25.0%
! TTTGAATGCAAAATATGTTG+AGG + chr4_1:67080582-67080601 Msa0566090:CDS 25.0%
! AATTTGTAAATAAGCTGAAG+AGG + chr4_1:67080797-67080816 Msa0566090:CDS 25.0%
! ATCAATAATAGGAAAGGAAA+TGG + chr4_1:67078727-67078746 Msa0566090:exon 25.0%
!!! TAGTAGTATGCATGTTTTAA+TGG + chr4_1:67078763-67078782 Msa0566090:CDS 25.0%
! AGATATGAAGTCAAATTGAA+GGG - chr4_1:67078930-67078949 None:intergenic 25.0%
! CATATACTACACAATCTATA+GGG - chr4_1:67079075-67079094 None:intergenic 25.0%
! TCATATACTACACAATCTAT+AGG - chr4_1:67079076-67079095 None:intergenic 25.0%
! TAATAAGGAATATAAAGAGG+AGG - chr4_1:67079418-67079437 None:intergenic 25.0%
!!! GTGAAAGCAATTTTAATAAG+TGG - chr4_1:67079508-67079527 None:intergenic 25.0%
! AATAAACAATAAATAGAGGG+TGG + chr4_1:67079560-67079579 Msa0566090:intron 25.0%
! ATATACATATAAATGGCTCA+CGG - chr4_1:67079895-67079914 None:intergenic 25.0%
! CACCTTATATATCATTCATA+TGG - chr4_1:67080083-67080102 None:intergenic 25.0%
! CATATGAATGATATATAAGG+TGG + chr4_1:67080081-67080100 Msa0566090:intron 25.0%
! TATGTCCAATATTGACAATT+GGG + chr4_1:67080122-67080141 Msa0566090:CDS 25.0%
! AAATCATTGTCTTTGTCATT+TGG - chr4_1:67080184-67080203 None:intergenic 25.0%
! TTTGAATTCAGCCAATTAAT+GGG - chr4_1:67080232-67080251 None:intergenic 25.0%
!! TTTTGAATTCAGCCAATTAA+TGG - chr4_1:67080233-67080252 None:intergenic 25.0%
! TCAGCTATTTATGTATCATT+TGG + chr4_1:67080262-67080281 Msa0566090:CDS 25.0%
! GAAATAGCATTAGGATTATT+AGG + chr4_1:67080319-67080338 Msa0566090:CDS 25.0%
! AAGTGGTTCAAATTTCTTAT+GGG + chr4_1:67080342-67080361 Msa0566090:CDS 25.0%
!! TCAACATATTTTGCATTCAA+AGG - chr4_1:67080583-67080602 None:intergenic 25.0%
! TTTGAATGCAAAATATGTTG+AGG + chr4_1:67080582-67080601 Msa0566090:CDS 25.0%
! AATTTGTAAATAAGCTGAAG+AGG + chr4_1:67080797-67080816 Msa0566090:CDS 25.0%
!!! AATGAATGCATGGTTTTGTA+CGG - chr4_1:67078656-67078675 None:intergenic 30.0%
AGAACTGAATATATGGTTTG+AGG - chr4_1:67078683-67078702 None:intergenic 30.0%
TTATTGATACAAGCACAAGT+TGG - chr4_1:67078715-67078734 None:intergenic 30.0%
CTTGTGCTTGTATCAATAAT+AGG + chr4_1:67078716-67078735 Msa0566090:five_prime_UTR 30.0%
GCTTGTATCAATAATAGGAA+AGG + chr4_1:67078721-67078740 Msa0566090:five_prime_UTR 30.0%
AAAAGGAGTTAAAGTCACAA+TGG + chr4_1:67078847-67078866 Msa0566090:CDS 30.0%
CAGATATGAAGTCAAATTGA+AGG - chr4_1:67078931-67078950 None:intergenic 30.0%
! CAATTTGACTTCATATCTGA+TGG + chr4_1:67078932-67078951 Msa0566090:CDS 30.0%
AATGAGTTCCTTCAAATTCT+TGG - chr4_1:67079029-67079048 None:intergenic 30.0%
! TATATGACCCTTTTCTTCAA+TGG + chr4_1:67079089-67079108 Msa0566090:CDS 30.0%
! ATATGACCCTTTTCTTCAAT+GGG + chr4_1:67079090-67079109 Msa0566090:CDS 30.0%
TCCTAGTAAGTCAAATTCTT+TGG - chr4_1:67079128-67079147 None:intergenic 30.0%
! GAAATTGGCATTGAAGATAT+AGG - chr4_1:67079223-67079242 None:intergenic 30.0%
CAAGAATGATATCTGCTTTA+TGG - chr4_1:67079354-67079373 None:intergenic 30.0%
! TTGTTTTCAATGTGTGTCAA+TGG - chr4_1:67079664-67079683 None:intergenic 30.0%
TACATGATTCTGTTATGTGA+TGG - chr4_1:67079938-67079957 None:intergenic 30.0%
!! ACTGAATTTTGGTAGAGATT+TGG + chr4_1:67080030-67080049 Msa0566090:intron 30.0%
ATGAATGATATATAAGGTGG+TGG + chr4_1:67080084-67080103 Msa0566090:intron 30.0%
CTATGTCCAATATTGACAAT+TGG + chr4_1:67080121-67080140 Msa0566090:CDS 30.0%
TAGATTCATCACCCATTAAT+TGG + chr4_1:67080218-67080237 Msa0566090:CDS 30.0%
TTATGTATCATTTGGAAGCA+TGG + chr4_1:67080270-67080289 Msa0566090:CDS 30.0%
CAAATGAAGGAAATAGCATT+AGG + chr4_1:67080310-67080329 Msa0566090:CDS 30.0%
GAAGTGGTTCAAATTTCTTA+TGG + chr4_1:67080341-67080360 Msa0566090:CDS 30.0%
ATTGAAGAAATGAGTTCAAG+TGG + chr4_1:67080406-67080425 Msa0566090:CDS 30.0%
AAATGAGTTCAAGTGGAAAA+GGG + chr4_1:67080413-67080432 Msa0566090:CDS 30.0%
GTTCTATCTAACAAAGCTAT+TGG + chr4_1:67080466-67080485 Msa0566090:CDS 30.0%
AGAGTTAAGGTAAATGAGAA+TGG + chr4_1:67080625-67080644 Msa0566090:CDS 30.0%
GAGTTAAGGTAAATGAGAAT+GGG + chr4_1:67080626-67080645 Msa0566090:CDS 30.0%
! AAAGTGATGGAAAATGACAT+TGG + chr4_1:67080685-67080704 Msa0566090:CDS 30.0%
TCAATTAATATTGGAGTCCT+TGG + chr4_1:67080872-67080891 Msa0566090:three_prime_UTR 30.0%
! TATTTTCCTTATGTAAGTGG+TGG + chr4_1:67080919-67080938 Msa0566090:three_prime_UTR 30.0%
!!! AATGAATGCATGGTTTTGTA+CGG - chr4_1:67078656-67078675 None:intergenic 30.0%
AGAACTGAATATATGGTTTG+AGG - chr4_1:67078683-67078702 None:intergenic 30.0%
TTATTGATACAAGCACAAGT+TGG - chr4_1:67078715-67078734 None:intergenic 30.0%
CTTGTGCTTGTATCAATAAT+AGG + chr4_1:67078716-67078735 Msa0566090:five_prime_UTR 30.0%
GCTTGTATCAATAATAGGAA+AGG + chr4_1:67078721-67078740 Msa0566090:five_prime_UTR 30.0%
AAAAGGAGTTAAAGTCACAA+TGG + chr4_1:67078847-67078866 Msa0566090:CDS 30.0%
CAGATATGAAGTCAAATTGA+AGG - chr4_1:67078931-67078950 None:intergenic 30.0%
! CAATTTGACTTCATATCTGA+TGG + chr4_1:67078932-67078951 Msa0566090:CDS 30.0%
AATGAGTTCCTTCAAATTCT+TGG - chr4_1:67079029-67079048 None:intergenic 30.0%
! TATATGACCCTTTTCTTCAA+TGG + chr4_1:67079089-67079108 Msa0566090:CDS 30.0%
! ATATGACCCTTTTCTTCAAT+GGG + chr4_1:67079090-67079109 Msa0566090:CDS 30.0%
TCCTAGTAAGTCAAATTCTT+TGG - chr4_1:67079128-67079147 None:intergenic 30.0%
! GAAATTGGCATTGAAGATAT+AGG - chr4_1:67079223-67079242 None:intergenic 30.0%
CAAGAATGATATCTGCTTTA+TGG - chr4_1:67079354-67079373 None:intergenic 30.0%
! TTGTTTTCAATGTGTGTCAA+TGG - chr4_1:67079664-67079683 None:intergenic 30.0%
TACATGATTCTGTTATGTGA+TGG - chr4_1:67079938-67079957 None:intergenic 30.0%
!! ACTGAATTTTGGTAGAGATT+TGG + chr4_1:67080030-67080049 Msa0566090:intron 30.0%
ATGAATGATATATAAGGTGG+TGG + chr4_1:67080084-67080103 Msa0566090:intron 30.0%
CTATGTCCAATATTGACAAT+TGG + chr4_1:67080121-67080140 Msa0566090:CDS 30.0%
TAGATTCATCACCCATTAAT+TGG + chr4_1:67080218-67080237 Msa0566090:CDS 30.0%
TTATGTATCATTTGGAAGCA+TGG + chr4_1:67080270-67080289 Msa0566090:CDS 30.0%
CAAATGAAGGAAATAGCATT+AGG + chr4_1:67080310-67080329 Msa0566090:CDS 30.0%
GAAGTGGTTCAAATTTCTTA+TGG + chr4_1:67080341-67080360 Msa0566090:CDS 30.0%
ATTGAAGAAATGAGTTCAAG+TGG + chr4_1:67080406-67080425 Msa0566090:CDS 30.0%
AAATGAGTTCAAGTGGAAAA+GGG + chr4_1:67080413-67080432 Msa0566090:CDS 30.0%
GTTCTATCTAACAAAGCTAT+TGG + chr4_1:67080466-67080485 Msa0566090:CDS 30.0%
AGAGTTAAGGTAAATGAGAA+TGG + chr4_1:67080625-67080644 Msa0566090:CDS 30.0%
GAGTTAAGGTAAATGAGAAT+GGG + chr4_1:67080626-67080645 Msa0566090:CDS 30.0%
! AAAGTGATGGAAAATGACAT+TGG + chr4_1:67080685-67080704 Msa0566090:CDS 30.0%
TCAATTAATATTGGAGTCCT+TGG + chr4_1:67080872-67080891 Msa0566090:three_prime_UTR 30.0%
! TATTTTCCTTATGTAAGTGG+TGG + chr4_1:67080919-67080938 Msa0566090:three_prime_UTR 30.0%
! TTGAGGTGATAATGAATGCA+TGG - chr4_1:67078666-67078685 None:intergenic 35.0%
! GTTTGCTGAATTGAAGCATT+GGG - chr4_1:67078817-67078836 None:intergenic 35.0%
!!! CATGGTTTTGGAGATGAAAA+TGG - chr4_1:67078879-67078898 None:intergenic 35.0%
TTGAAGGTAAGGATGATGAT+TGG - chr4_1:67078907-67078926 None:intergenic 35.0%
AAATTGAAGGGTTGAAGGTA+AGG - chr4_1:67078918-67078937 None:intergenic 35.0%
AAGTCAAATTGAAGGGTTGA+AGG - chr4_1:67078923-67078942 None:intergenic 35.0%
ATATCTGATGGCTATGATGA+AGG + chr4_1:67078944-67078963 Msa0566090:CDS 35.0%
! GGTTTTCATGTGAGATAGAT+AGG - chr4_1:67078999-67079018 None:intergenic 35.0%
CTATCTCACATGAAAACCAT+AGG + chr4_1:67079001-67079020 Msa0566090:CDS 35.0%
CCAAAACCCATTGAAGAAAA+GGG - chr4_1:67079099-67079118 None:intergenic 35.0%
TCCAAAACCCATTGAAGAAA+AGG - chr4_1:67079100-67079119 None:intergenic 35.0%
! GCCAAAGAATTTGACTTACT+AGG + chr4_1:67079124-67079143 Msa0566090:CDS 35.0%
!! TAGGAAGCTTTAAAAGTCCA+TGG - chr4_1:67079204-67079223 None:intergenic 35.0%
!! GTATCTTTGAGATCAAGCAA+AGG - chr4_1:67079259-67079278 None:intergenic 35.0%
ATAACCATCTCATAGTAAGC+AGG - chr4_1:67079313-67079332 None:intergenic 35.0%
TCATCAATTCCATAGACCTA+TGG + chr4_1:67079455-67079474 Msa0566090:intron 35.0%
ACTAATCTTCCATAGGTCTA+TGG - chr4_1:67079467-67079486 None:intergenic 35.0%
ATAGACCTATGGAAGATTAG+TGG + chr4_1:67079466-67079485 Msa0566090:intron 35.0%
TAGACCTATGGAAGATTAGT+GGG + chr4_1:67079467-67079486 Msa0566090:intron 35.0%
AAGTAAAAGGATGGAACTGT+TGG - chr4_1:67080148-67080167 None:intergenic 35.0%
! AACAGTTCCATCCTTTTACT+TGG + chr4_1:67080147-67080166 Msa0566090:CDS 35.0%
CTTTAGCATAGAGCAAATGA+AGG + chr4_1:67080297-67080316 Msa0566090:CDS 35.0%
GCATTAGGATTATTAGGAAG+TGG + chr4_1:67080325-67080344 Msa0566090:CDS 35.0%
CTTATGGGTAATCCCTAATA+TGG + chr4_1:67080357-67080376 Msa0566090:CDS 35.0%
GAAATGAGTTCAAGTGGAAA+AGG + chr4_1:67080412-67080431 Msa0566090:CDS 35.0%
TTAGATAGAACTTCCAACTG+TGG - chr4_1:67080457-67080476 None:intergenic 35.0%
!! ACACTTGAAGCATTGTGTTT+AGG + chr4_1:67080520-67080539 Msa0566090:CDS 35.0%
CAAAATATGTTGAGGATGTG+TGG + chr4_1:67080590-67080609 Msa0566090:CDS 35.0%
AAGAGATTGAGAGTTGCATT+AGG + chr4_1:67080662-67080681 Msa0566090:CDS 35.0%
TGCTAAGAAATGGAGAGAAT+TGG + chr4_1:67080726-67080745 Msa0566090:CDS 35.0%
AATATTGGAGTCCTTGGATT+TGG + chr4_1:67080878-67080897 Msa0566090:three_prime_UTR 35.0%
TCTCATACAATCCAAATCCA+AGG - chr4_1:67080892-67080911 None:intergenic 35.0%
! TTGAGGTGATAATGAATGCA+TGG - chr4_1:67078666-67078685 None:intergenic 35.0%
! GTTTGCTGAATTGAAGCATT+GGG - chr4_1:67078817-67078836 None:intergenic 35.0%
!!! CATGGTTTTGGAGATGAAAA+TGG - chr4_1:67078879-67078898 None:intergenic 35.0%
TTGAAGGTAAGGATGATGAT+TGG - chr4_1:67078907-67078926 None:intergenic 35.0%
AAATTGAAGGGTTGAAGGTA+AGG - chr4_1:67078918-67078937 None:intergenic 35.0%
AAGTCAAATTGAAGGGTTGA+AGG - chr4_1:67078923-67078942 None:intergenic 35.0%
ATATCTGATGGCTATGATGA+AGG + chr4_1:67078944-67078963 Msa0566090:CDS 35.0%
! GGTTTTCATGTGAGATAGAT+AGG - chr4_1:67078999-67079018 None:intergenic 35.0%
CTATCTCACATGAAAACCAT+AGG + chr4_1:67079001-67079020 Msa0566090:CDS 35.0%
CCAAAACCCATTGAAGAAAA+GGG - chr4_1:67079099-67079118 None:intergenic 35.0%
TCCAAAACCCATTGAAGAAA+AGG - chr4_1:67079100-67079119 None:intergenic 35.0%
! GCCAAAGAATTTGACTTACT+AGG + chr4_1:67079124-67079143 Msa0566090:CDS 35.0%
!! TAGGAAGCTTTAAAAGTCCA+TGG - chr4_1:67079204-67079223 None:intergenic 35.0%
!! GTATCTTTGAGATCAAGCAA+AGG - chr4_1:67079259-67079278 None:intergenic 35.0%
ATAACCATCTCATAGTAAGC+AGG - chr4_1:67079313-67079332 None:intergenic 35.0%
TCATCAATTCCATAGACCTA+TGG + chr4_1:67079455-67079474 Msa0566090:intron 35.0%
ACTAATCTTCCATAGGTCTA+TGG - chr4_1:67079467-67079486 None:intergenic 35.0%
ATAGACCTATGGAAGATTAG+TGG + chr4_1:67079466-67079485 Msa0566090:intron 35.0%
TAGACCTATGGAAGATTAGT+GGG + chr4_1:67079467-67079486 Msa0566090:intron 35.0%
AAGTAAAAGGATGGAACTGT+TGG - chr4_1:67080148-67080167 None:intergenic 35.0%
! AACAGTTCCATCCTTTTACT+TGG + chr4_1:67080147-67080166 Msa0566090:CDS 35.0%
CTTTAGCATAGAGCAAATGA+AGG + chr4_1:67080297-67080316 Msa0566090:CDS 35.0%
GCATTAGGATTATTAGGAAG+TGG + chr4_1:67080325-67080344 Msa0566090:CDS 35.0%
CTTATGGGTAATCCCTAATA+TGG + chr4_1:67080357-67080376 Msa0566090:CDS 35.0%
GAAATGAGTTCAAGTGGAAA+AGG + chr4_1:67080412-67080431 Msa0566090:CDS 35.0%
TTAGATAGAACTTCCAACTG+TGG - chr4_1:67080457-67080476 None:intergenic 35.0%
!! ACACTTGAAGCATTGTGTTT+AGG + chr4_1:67080520-67080539 Msa0566090:CDS 35.0%
CAAAATATGTTGAGGATGTG+TGG + chr4_1:67080590-67080609 Msa0566090:CDS 35.0%
AAGAGATTGAGAGTTGCATT+AGG + chr4_1:67080662-67080681 Msa0566090:CDS 35.0%
TGCTAAGAAATGGAGAGAAT+TGG + chr4_1:67080726-67080745 Msa0566090:CDS 35.0%
AATATTGGAGTCCTTGGATT+TGG + chr4_1:67080878-67080897 Msa0566090:three_prime_UTR 35.0%
TCTCATACAATCCAAATCCA+AGG - chr4_1:67080892-67080911 None:intergenic 35.0%
GGTTTATGTGACCTTGACTT+GGG - chr4_1:67078796-67078815 None:intergenic 40.0%
! CGTTTGCTGAATTGAAGCAT+TGG - chr4_1:67078818-67078837 None:intergenic 40.0%
AGCAAACGTTTGAGCACAAA+AGG + chr4_1:67078830-67078849 Msa0566090:CDS 40.0%
! TGATTGGAGATGCATGGTTT+TGG - chr4_1:67078891-67078910 None:intergenic 40.0%
CTTCAAATTCTTGGAGCCTA+TGG - chr4_1:67079020-67079039 None:intergenic 40.0%
CATAGGCTCCAAGAATTTGA+AGG + chr4_1:67079018-67079037 Msa0566090:CDS 40.0%
!! CCCTTTTCTTCAATGGGTTT+TGG + chr4_1:67079096-67079115 Msa0566090:CDS 40.0%
TCAATGCCAATTTCTATGCC+AGG + chr4_1:67079229-67079248 Msa0566090:CDS 40.0%
CAATGCCAATTTCTATGCCA+GGG + chr4_1:67079230-67079249 Msa0566090:CDS 40.0%
AGGGTCATAAACAAAGGAAG+GGG - chr4_1:67079281-67079300 None:intergenic 40.0%
CAGGGTCATAAACAAAGGAA+GGG - chr4_1:67079282-67079301 None:intergenic 40.0%
CTATCCTGCTTACTATGAGA+TGG + chr4_1:67079306-67079325 Msa0566090:CDS 40.0%
GTTGGCCCAATTGTCAATAT+TGG - chr4_1:67080130-67080149 None:intergenic 40.0%
! TCCATCCTTTTACTTGGACA+AGG + chr4_1:67080153-67080172 Msa0566090:CDS 40.0%
! CCATCCTTTTACTTGGACAA+GGG + chr4_1:67080154-67080173 Msa0566090:CDS 40.0%
AACTCCCTTGTCCAAGTAAA+AGG - chr4_1:67080161-67080180 None:intergenic 40.0%
TGGCTGAATTCAAAACCTGA+AGG + chr4_1:67080238-67080257 Msa0566090:CDS 40.0%
GGCTGAATTCAAAACCTGAA+GGG + chr4_1:67080239-67080258 Msa0566090:CDS 40.0%
ACATAAATAGCTGACCCTTC+AGG - chr4_1:67080256-67080275 None:intergenic 40.0%
!! GAAAAGGGTTGGTAGTGAAT+TGG + chr4_1:67080428-67080447 Msa0566090:CDS 40.0%
AGTGAATTGGATACCACAGT+TGG + chr4_1:67080441-67080460 Msa0566090:CDS 40.0%
! GGTTGCTTTCTAACACATAG+TGG + chr4_1:67080487-67080506 Msa0566090:CDS 40.0%
! GCTTTCTAACACATAGTGGA+TGG + chr4_1:67080491-67080510 Msa0566090:CDS 40.0%
!! ATTGTGTTTAGGAGTGCCTA+TGG + chr4_1:67080531-67080550 Msa0566090:CDS 40.0%
GAAAGTGGGAATGAGAGTTA+AGG + chr4_1:67080612-67080631 Msa0566090:CDS 40.0%
GAGTTGCATTAGGAAAGTGA+TGG + chr4_1:67080672-67080691 Msa0566090:CDS 40.0%
GCTATAGAAGCAGTAAGTCA+TGG + chr4_1:67080748-67080767 Msa0566090:CDS 40.0%
ATAGAAGCAGTAAGTCATGG+TGG + chr4_1:67080751-67080770 Msa0566090:CDS 40.0%
GGTTTATGTGACCTTGACTT+GGG - chr4_1:67078796-67078815 None:intergenic 40.0%
! CGTTTGCTGAATTGAAGCAT+TGG - chr4_1:67078818-67078837 None:intergenic 40.0%
AGCAAACGTTTGAGCACAAA+AGG + chr4_1:67078830-67078849 Msa0566090:CDS 40.0%
! TGATTGGAGATGCATGGTTT+TGG - chr4_1:67078891-67078910 None:intergenic 40.0%
CTTCAAATTCTTGGAGCCTA+TGG - chr4_1:67079020-67079039 None:intergenic 40.0%
CATAGGCTCCAAGAATTTGA+AGG + chr4_1:67079018-67079037 Msa0566090:CDS 40.0%
!! CCCTTTTCTTCAATGGGTTT+TGG + chr4_1:67079096-67079115 Msa0566090:CDS 40.0%
TCAATGCCAATTTCTATGCC+AGG + chr4_1:67079229-67079248 Msa0566090:CDS 40.0%
CAATGCCAATTTCTATGCCA+GGG + chr4_1:67079230-67079249 Msa0566090:CDS 40.0%
AGGGTCATAAACAAAGGAAG+GGG - chr4_1:67079281-67079300 None:intergenic 40.0%
CAGGGTCATAAACAAAGGAA+GGG - chr4_1:67079282-67079301 None:intergenic 40.0%
CTATCCTGCTTACTATGAGA+TGG + chr4_1:67079306-67079325 Msa0566090:CDS 40.0%
GTTGGCCCAATTGTCAATAT+TGG - chr4_1:67080130-67080149 None:intergenic 40.0%
! TCCATCCTTTTACTTGGACA+AGG + chr4_1:67080153-67080172 Msa0566090:CDS 40.0%
! CCATCCTTTTACTTGGACAA+GGG + chr4_1:67080154-67080173 Msa0566090:CDS 40.0%
AACTCCCTTGTCCAAGTAAA+AGG - chr4_1:67080161-67080180 None:intergenic 40.0%
TGGCTGAATTCAAAACCTGA+AGG + chr4_1:67080238-67080257 Msa0566090:CDS 40.0%
GGCTGAATTCAAAACCTGAA+GGG + chr4_1:67080239-67080258 Msa0566090:CDS 40.0%
ACATAAATAGCTGACCCTTC+AGG - chr4_1:67080256-67080275 None:intergenic 40.0%
!! GAAAAGGGTTGGTAGTGAAT+TGG + chr4_1:67080428-67080447 Msa0566090:CDS 40.0%
AGTGAATTGGATACCACAGT+TGG + chr4_1:67080441-67080460 Msa0566090:CDS 40.0%
! GGTTGCTTTCTAACACATAG+TGG + chr4_1:67080487-67080506 Msa0566090:CDS 40.0%
! GCTTTCTAACACATAGTGGA+TGG + chr4_1:67080491-67080510 Msa0566090:CDS 40.0%
!! ATTGTGTTTAGGAGTGCCTA+TGG + chr4_1:67080531-67080550 Msa0566090:CDS 40.0%
GAAAGTGGGAATGAGAGTTA+AGG + chr4_1:67080612-67080631 Msa0566090:CDS 40.0%
GAGTTGCATTAGGAAAGTGA+TGG + chr4_1:67080672-67080691 Msa0566090:CDS 40.0%
GCTATAGAAGCAGTAAGTCA+TGG + chr4_1:67080748-67080767 Msa0566090:CDS 40.0%
ATAGAAGCAGTAAGTCATGG+TGG + chr4_1:67080751-67080770 Msa0566090:CDS 40.0%
ATGGTTCCATACCCAAGTCA+AGG + chr4_1:67078782-67078801 Msa0566090:CDS 45.0%
!! ATGTGACCTTGACTTGGGTA+TGG - chr4_1:67078791-67078810 None:intergenic 45.0%
GGGTTTATGTGACCTTGACT+TGG - chr4_1:67078797-67078816 None:intergenic 45.0%
GGATGATGATTGGAGATGCA+TGG - chr4_1:67078897-67078916 None:intergenic 45.0%
TCTGATGGCTATGATGAAGG+TGG + chr4_1:67078947-67078966 Msa0566090:CDS 45.0%
CCAGGGTCATAAACAAAGGA+AGG - chr4_1:67079283-67079302 None:intergenic 45.0%
! CCTTCCTTTGTTTATGACCC+TGG + chr4_1:67079280-67079299 Msa0566090:CDS 45.0%
GAAGCCAGGGTCATAAACAA+AGG - chr4_1:67079287-67079306 None:intergenic 45.0%
AGTAAGCAGGATAGAAGCCA+GGG - chr4_1:67079300-67079319 None:intergenic 45.0%
TAGTAAGCAGGATAGAAGCC+AGG - chr4_1:67079301-67079320 None:intergenic 45.0%
!! CTGGTCTTCTAGCTTGTAGA+AGG - chr4_1:67079383-67079402 None:intergenic 45.0%
CTTCTACAAGCTAGAAGACC+AGG + chr4_1:67079381-67079400 Msa0566090:CDS 45.0%
GTGTCCCACTAATCTTCCAT+AGG - chr4_1:67079474-67079493 None:intergenic 45.0%
CCCTTGTCCAAGTAAAAGGA+TGG - chr4_1:67080157-67080176 None:intergenic 45.0%
GAGTTCAAGTGGAAAAGGGT+TGG + chr4_1:67080417-67080436 Msa0566090:CDS 45.0%
CACTGTGGTATTGCAACCAT+AGG - chr4_1:67080550-67080569 None:intergenic 45.0%
CTATGGTTGCAATACCACAG+TGG + chr4_1:67080548-67080567 Msa0566090:CDS 45.0%
! AAAGGTTGATCAGTCCACTG+TGG - chr4_1:67080565-67080584 None:intergenic 45.0%
TGTTGAGGATGTGTGGAAAG+TGG + chr4_1:67080597-67080616 Msa0566090:CDS 45.0%
GTTGAGGATGTGTGGAAAGT+GGG + chr4_1:67080598-67080617 Msa0566090:CDS 45.0%
! GAAGCACCACCACTTACATA+AGG - chr4_1:67080928-67080947 None:intergenic 45.0%
CACACACTCAAACACCAAAC+AGG + chr4_1:67080982-67081001 Msa0566090:three_prime_UTR 45.0%
ATGGTTCCATACCCAAGTCA+AGG + chr4_1:67078782-67078801 Msa0566090:CDS 45.0%
!! ATGTGACCTTGACTTGGGTA+TGG - chr4_1:67078791-67078810 None:intergenic 45.0%
GGGTTTATGTGACCTTGACT+TGG - chr4_1:67078797-67078816 None:intergenic 45.0%
GGATGATGATTGGAGATGCA+TGG - chr4_1:67078897-67078916 None:intergenic 45.0%
TCTGATGGCTATGATGAAGG+TGG + chr4_1:67078947-67078966 Msa0566090:CDS 45.0%
CCAGGGTCATAAACAAAGGA+AGG - chr4_1:67079283-67079302 None:intergenic 45.0%
! CCTTCCTTTGTTTATGACCC+TGG + chr4_1:67079280-67079299 Msa0566090:CDS 45.0%
GAAGCCAGGGTCATAAACAA+AGG - chr4_1:67079287-67079306 None:intergenic 45.0%
AGTAAGCAGGATAGAAGCCA+GGG - chr4_1:67079300-67079319 None:intergenic 45.0%
TAGTAAGCAGGATAGAAGCC+AGG - chr4_1:67079301-67079320 None:intergenic 45.0%
!! CTGGTCTTCTAGCTTGTAGA+AGG - chr4_1:67079383-67079402 None:intergenic 45.0%
CTTCTACAAGCTAGAAGACC+AGG + chr4_1:67079381-67079400 Msa0566090:CDS 45.0%
GTGTCCCACTAATCTTCCAT+AGG - chr4_1:67079474-67079493 None:intergenic 45.0%
CCCTTGTCCAAGTAAAAGGA+TGG - chr4_1:67080157-67080176 None:intergenic 45.0%
GAGTTCAAGTGGAAAAGGGT+TGG + chr4_1:67080417-67080436 Msa0566090:CDS 45.0%
CACTGTGGTATTGCAACCAT+AGG - chr4_1:67080550-67080569 None:intergenic 45.0%
CTATGGTTGCAATACCACAG+TGG + chr4_1:67080548-67080567 Msa0566090:CDS 45.0%
! AAAGGTTGATCAGTCCACTG+TGG - chr4_1:67080565-67080584 None:intergenic 45.0%
TGTTGAGGATGTGTGGAAAG+TGG + chr4_1:67080597-67080616 Msa0566090:CDS 45.0%
GTTGAGGATGTGTGGAAAGT+GGG + chr4_1:67080598-67080617 Msa0566090:CDS 45.0%
! GAAGCACCACCACTTACATA+AGG - chr4_1:67080928-67080947 None:intergenic 45.0%
! GAAGGTGGCTTTGCTCAAGT+TGG + chr4_1:67078962-67078981 Msa0566090:CDS 50.0%
GGAAGCCCTGGCATAGAAAT+TGG - chr4_1:67079238-67079257 None:intergenic 50.0%
AGATCAAGCAAAGGAAGCCC+TGG - chr4_1:67079250-67079269 None:intergenic 50.0%
GAGGAGGTGAGTCAAAAACC+TGG - chr4_1:67079402-67079421 None:intergenic 50.0%
! GAAGGTGGCTTTGCTCAAGT+TGG + chr4_1:67078962-67078981 Msa0566090:CDS 50.0%
GGAAGCCCTGGCATAGAAAT+TGG - chr4_1:67079238-67079257 None:intergenic 50.0%
AGATCAAGCAAAGGAAGCCC+TGG - chr4_1:67079250-67079269 None:intergenic 50.0%
GAGGAGGTGAGTCAAAAACC+TGG - chr4_1:67079402-67079421 None:intergenic 50.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 67078648 67081001 67078648 ID=Msa0566090;Name=Msa0566090
chr4_1 mRNA 67078648 67081001 67078648 ID=Msa0566090-mRNA-1;Parent=Msa0566090;Name=Msa0566090-mRNA-1;_AED=0.04;_eAED=0.04;_QI=98|1|1|1|1|1|2|176|460
chr4_1 exon 67078648 67079402 67078648 ID=Msa0566090-mRNA-1:exon:21862;Parent=Msa0566090-mRNA-1
chr4_1 exon 67080100 67081001 67080100 ID=Msa0566090-mRNA-1:exon:21863;Parent=Msa0566090-mRNA-1
chr4_1 five_prime_UTR 67078648 67078745 67078648 ID=Msa0566090-mRNA-1:five_prime_utr;Parent=Msa0566090-mRNA-1
chr4_1 CDS 67078746 67079402 67078746 ID=Msa0566090-mRNA-1:cds;Parent=Msa0566090-mRNA-1
chr4_1 CDS 67080100 67080825 67080100 ID=Msa0566090-mRNA-1:cds;Parent=Msa0566090-mRNA-1
chr4_1 three_prime_UTR 67080826 67081001 67080826 ID=Msa0566090-mRNA-1:three_prime_utr;Parent=Msa0566090-mRNA-1
Gene Sequence

>Msa0566090

ATGGAAGAGAGAAAGAGTAGTAGTATGCATGTTTTAATGGTTCCATACCCAAGTCAAGGTCACATAAACCCAATGCTTCAATTCAGCAAACGTTTGAGCACAAAAGGAGTTAAAGTCACAATGGTCACAACCATTTTCATCTCCAAAACCATGCATCTCCAATCATCATCCTTACCTTCAACCCTTCAATTTGACTTCATATCTGATGGCTATGATGAAGGTGGCTTTGCTCAAGTTGGCAACATATCAACCTATCTATCTCACATGAAAACCATAGGCTCCAAGAATTTGAAGGAACTCATTCAAAAACATAATGTTTCTGATCACCCTATAGATTGTGTAGTATATGACCCTTTTCTTCAATGGGTTTTGGATGTAGCCAAAGAATTTGACTTACTAGGAGCTGCTTTTTTCACTCAAATGTGTGCTGTCAATTACATGTATTATTATGTTTACCATGGACTTTTAAAGCTTCCTATATCTTCAATGCCAATTTCTATGCCAGGGCTTCCTTTGCTTGATCTCAAAGATACCCCTTCCTTTGTTTATGACCCTGGCTTCTATCCTGCTTACTATGAGATGGTTATGAATCAATATTCTAACATCCATAAAGCAGATATCATTCTTGTCAATTCCTTCTACAAGCTAGAAGACCAGGTGGTGGATTCTATGTCAAAGCTATGTCCAATATTGACAATTGGGCCAACAGTTCCATCCTTTTACTTGGACAAGGGAGTTCCAAATGACAAAGACAATGATTTGAATCTCTTTCAGTTAGATTCATCACCCATTAATTGGCTGAATTCAAAACCTGAAGGGTCAGCTATTTATGTATCATTTGGAAGCATGGTATGCTTTAGCATAGAGCAAATGAAGGAAATAGCATTAGGATTATTAGGAAGTGGTTCAAATTTCTTATGGGTAATCCCTAATATGGAGAAAAAGAATATCTCAAAAGAGTTGATTGAAGAAATGAGTTCAAGTGGAAAAGGGTTGGTAGTGAATTGGATACCACAGTTGGAAGTTCTATCTAACAAAGCTATTGGTTGCTTTCTAACACATAGTGGATGGAATTCAACACTTGAAGCATTGTGTTTAGGAGTGCCTATGGTTGCAATACCACAGTGGACTGATCAACCTTTGAATGCAAAATATGTTGAGGATGTGTGGAAAGTGGGAATGAGAGTTAAGGTAAATGAGAATGGGATTGTGACAAAAGAAGAGATTGAGAGTTGCATTAGGAAAGTGATGGAAAATGACATTGGAAGAGAAATGAAAATTAATGCTAAGAAATGGAGAGAATTGGCTATAGAAGCAGTAAGTCATGGTGGCACTTCAGATAACAACATCAATGAATTTGTAAATAAGCTGAAGAGGTCCTAA
Protein sequence

>Msa0566090

MEERKSSSMHVLMVPYPSQGHINPMLQFSKRLSTKGVKVTMVTTIFISKTMHLQSSSLPSTLQFDFISDGYDEGGFAQVGNISTYLSHMKTIGSKNLKELIQKHNVSDHPIDCVVYDPFLQWVLDVAKEFDLLGAAFFTQMCAVNYMYYYVYHGLLKLPISSMPISMPGLPLLDLKDTPSFVYDPGFYPAYYEMVMNQYSNIHKADIILVNSFYKLEDQVVDSMSKLCPILTIGPTVPSFYLDKGVPNDKDNDLNLFQLDSSPINWLNSKPEGSAIYVSFGSMVCFSIEQMKEIALGLLGSGSNFLWVIPNMEKKNISKELIEEMSSSGKGLVVNWIPQLEVLSNKAIGCFLTHSGWNSTLEALCLGVPMVAIPQWTDQPLNAKYVEDVWKVGMRVKVNENGIVTKEEIESCIRKVMENDIGREMKINAKKWRELAIEAVSHGGTSDNNINEFVNKLKRS*