Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0330540 | XP_003596948.2 | 95.652 | 299 | 13 | 0 | 1 | 299 | 442 | 740 | 0.0 | 590 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0330540 | sp|O80891|CSLB4_ARATH | 41.528 | 301 | 163 | 2 | 1 | 290 | 451 | 749 | 1.09e-70 | 235 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0298620 | Msa0330540 | 0.828971 | 6.682393e-55 | -8.615850e-47 |
| Msa0330540 | Msa0909140 | 0.812192 | 4.798541e-51 | -8.615850e-47 |
| Msa0330540 | Msa0954910 | 0.801127 | 1.042678e-48 | -8.615850e-47 |
| Msa0330540 | Msa1249490 | 0.804026 | 2.631498e-49 | -8.615850e-47 |
| Msa0330540 | Msa1284680 | 0.802016 | 6.851271e-49 | -8.615850e-47 |
| Msa0330540 | Msa1393320 | 0.805630 | 1.216670e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0330540 | MtrunA17_Chr2g0322371 | 95.652 | 299 | 13 | 0 | 1 | 299 | 442 | 740 | 0.0 | 590 |
| Msa0330540 | MtrunA17_Chr2g0322361 | 90.635 | 299 | 28 | 0 | 1 | 299 | 452 | 750 | 0.0 | 558 |
| Msa0330540 | MtrunA17_Chr2g0322331 | 56.711 | 298 | 126 | 3 | 1 | 296 | 82 | 378 | 7.90e-111 | 326 |
| Msa0330540 | MtrunA17_Chr4g0025201 | 53.872 | 297 | 136 | 1 | 1 | 296 | 444 | 740 | 1.71e-109 | 333 |
| Msa0330540 | MtrunA17_Chr2g0322351 | 53.716 | 296 | 128 | 2 | 1 | 296 | 448 | 734 | 8.43e-107 | 327 |
| Msa0330540 | MtrunA17_Chr3g0102551 | 32.323 | 297 | 190 | 7 | 1 | 290 | 441 | 733 | 1.23e-35 | 135 |
| Msa0330540 | MtrunA17_Chr3g0137951 | 31.250 | 304 | 192 | 7 | 1 | 297 | 776 | 1069 | 1.26e-32 | 127 |
| Msa0330540 | MtrunA17_Chr3g0088821 | 29.739 | 306 | 198 | 7 | 1 | 299 | 768 | 1063 | 3.65e-32 | 125 |
| Msa0330540 | MtrunA17_Chr7g0267731 | 29.260 | 311 | 193 | 7 | 1 | 299 | 676 | 971 | 4.65e-32 | 125 |
| Msa0330540 | MtrunA17_Chr4g0073711 | 32.686 | 309 | 181 | 8 | 1 | 297 | 728 | 1021 | 1.49e-31 | 124 |
| Msa0330540 | MtrunA17_Chr8g0352231 | 29.412 | 306 | 199 | 7 | 1 | 299 | 768 | 1063 | 2.24e-31 | 123 |
| Msa0330540 | MtrunA17_Chr1g0183381 | 30.068 | 296 | 187 | 9 | 1 | 289 | 596 | 878 | 3.38e-30 | 120 |
| Msa0330540 | MtrunA17_Chr2g0296991 | 29.032 | 310 | 190 | 7 | 1 | 297 | 735 | 1027 | 3.67e-30 | 120 |
| Msa0330540 | MtrunA17_Chr8g0383701 | 28.013 | 307 | 197 | 5 | 1 | 297 | 787 | 1079 | 1.28e-28 | 115 |
| Msa0330540 | MtrunA17_Chr3g0102541 | 30.132 | 302 | 185 | 7 | 1 | 287 | 436 | 726 | 4.65e-28 | 114 |
| Msa0330540 | MtrunA17_Chr2g0284211 | 30.000 | 300 | 184 | 7 | 1 | 289 | 667 | 951 | 1.07e-27 | 112 |
| Msa0330540 | MtrunA17_Chr3g0102531 | 29.655 | 290 | 199 | 4 | 1 | 287 | 435 | 722 | 1.26e-27 | 112 |
| Msa0330540 | MtrunA17_Chr3g0078671 | 28.383 | 303 | 205 | 5 | 1 | 297 | 736 | 1032 | 1.56e-27 | 112 |
| Msa0330540 | MtrunA17_Chr5g0410641 | 28.269 | 283 | 172 | 6 | 1 | 269 | 814 | 1079 | 2.34e-25 | 106 |
| Msa0330540 | MtrunA17_Chr1g0201731 | 27.243 | 301 | 207 | 5 | 1 | 297 | 788 | 1080 | 3.24e-25 | 105 |
| Msa0330540 | MtrunA17_Chr8g0379241 | 29.431 | 299 | 187 | 7 | 1 | 289 | 679 | 963 | 1.24e-24 | 103 |
| Msa0330540 | MtrunA17_Chr2g0297351 | 28.044 | 271 | 188 | 3 | 1 | 269 | 717 | 982 | 1.25e-24 | 103 |
| Msa0330540 | MtrunA17_Chr8g0364641 | 28.387 | 310 | 195 | 10 | 1 | 297 | 669 | 964 | 3.48e-24 | 102 |
| Msa0330540 | MtrunA17_Chr1g0165411 | 27.333 | 300 | 192 | 6 | 1 | 289 | 796 | 1080 | 4.73e-24 | 102 |
| Msa0330540 | MtrunA17_Chr7g0269741 | 27.857 | 280 | 178 | 5 | 1 | 269 | 862 | 1128 | 5.89e-24 | 102 |
| Msa0330540 | MtrunA17_Chr4g0039801 | 27.857 | 280 | 177 | 5 | 1 | 269 | 835 | 1100 | 5.92e-24 | 102 |
| Msa0330540 | MtrunA17_Chr1g0165421 | 27.500 | 280 | 178 | 5 | 1 | 269 | 824 | 1089 | 2.96e-22 | 97.1 |
| Msa0330540 | MtrunA17_Chr4g0046401 | 27.333 | 300 | 205 | 8 | 1 | 294 | 443 | 735 | 4.30e-18 | 84.7 |
| Msa0330540 | MtrunA17_Chr3g0077511 | 23.881 | 268 | 199 | 4 | 1 | 266 | 422 | 686 | 4.03e-17 | 81.6 |
| Msa0330540 | MtrunA17_Chr3g0095791 | 24.731 | 279 | 191 | 8 | 1 | 271 | 421 | 688 | 3.88e-16 | 78.6 |
| Msa0330540 | MtrunA17_Chr2g0298581 | 25.090 | 279 | 194 | 6 | 1 | 273 | 422 | 691 | 1.36e-15 | 77.0 |
| Msa0330540 | MtrunA17_Chr1g0186381 | 23.003 | 313 | 208 | 11 | 1 | 298 | 442 | 736 | 3.16e-14 | 73.2 |
| Msa0330540 | MtrunA17_Chr2g0307191 | 24.215 | 223 | 163 | 4 | 1 | 221 | 422 | 640 | 4.18e-14 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0330540 | AT2G32540.1 | 41.528 | 301 | 163 | 2 | 1 | 290 | 451 | 749 | 1.11e-71 | 235 |
| Msa0330540 | AT2G32530.1 | 40.594 | 303 | 167 | 2 | 1 | 292 | 451 | 751 | 3.05e-68 | 226 |
| Msa0330540 | AT2G32620.4 | 40.132 | 304 | 169 | 3 | 1 | 292 | 355 | 657 | 5.18e-61 | 205 |
| Msa0330540 | AT2G32620.1 | 40.132 | 304 | 169 | 3 | 1 | 292 | 451 | 753 | 1.97e-60 | 205 |
| Msa0330540 | AT2G32610.1 | 38.235 | 306 | 173 | 5 | 1 | 292 | 452 | 755 | 2.35e-60 | 205 |
| Msa0330540 | AT4G15290.1 | 37.908 | 306 | 176 | 4 | 1 | 293 | 450 | 754 | 4.27e-59 | 201 |
| Msa0330540 | AT4G15320.5 | 36.688 | 308 | 177 | 5 | 1 | 292 | 450 | 755 | 2.85e-56 | 194 |
| Msa0330540 | AT4G15320.3 | 36.688 | 308 | 177 | 5 | 1 | 292 | 450 | 755 | 3.03e-56 | 194 |
| Msa0330540 | AT4G15320.4 | 36.688 | 308 | 177 | 5 | 1 | 292 | 465 | 770 | 3.84e-56 | 194 |
| Msa0330540 | AT1G55850.1 | 34.694 | 294 | 179 | 8 | 1 | 287 | 433 | 720 | 2.25e-35 | 135 |
| Msa0330540 | AT2G25540.1 | 32.673 | 303 | 189 | 6 | 1 | 297 | 750 | 1043 | 3.26e-34 | 132 |
| Msa0330540 | AT4G32410.1 | 31.579 | 304 | 191 | 7 | 1 | 297 | 770 | 1063 | 7.87e-34 | 131 |
| Msa0330540 | AT5G05170.1 | 31.699 | 306 | 192 | 7 | 1 | 299 | 755 | 1050 | 1.51e-33 | 130 |
| Msa0330540 | AT5G17420.1 | 31.579 | 304 | 191 | 7 | 1 | 297 | 716 | 1009 | 3.63e-33 | 129 |
| Msa0330540 | AT4G15320.1 | 35.233 | 193 | 109 | 3 | 1 | 193 | 539 | 715 | 3.50e-32 | 126 |
| Msa0330540 | AT4G15320.2 | 35.233 | 193 | 109 | 3 | 1 | 193 | 496 | 672 | 3.84e-32 | 126 |
| Msa0330540 | AT4G24010.1 | 32.955 | 264 | 154 | 7 | 1 | 256 | 437 | 685 | 1.41e-30 | 121 |
| Msa0330540 | AT2G32620.3 | 39.597 | 149 | 89 | 1 | 1 | 149 | 451 | 598 | 1.69e-30 | 120 |
| Msa0330540 | AT4G24000.2 | 29.630 | 297 | 189 | 7 | 1 | 288 | 235 | 520 | 3.98e-30 | 119 |
| Msa0330540 | AT4G23990.2 | 29.097 | 299 | 192 | 7 | 1 | 290 | 242 | 529 | 4.13e-30 | 119 |
| Msa0330540 | AT4G24000.1 | 29.630 | 297 | 189 | 7 | 1 | 288 | 427 | 712 | 1.32e-29 | 119 |
| Msa0330540 | AT4G23990.1 | 29.097 | 299 | 192 | 7 | 1 | 290 | 456 | 743 | 1.91e-29 | 118 |
| Msa0330540 | AT1G32180.1 | 29.181 | 281 | 176 | 6 | 1 | 270 | 673 | 941 | 4.50e-29 | 117 |
| Msa0330540 | AT1G32180.2 | 29.181 | 281 | 176 | 6 | 1 | 270 | 673 | 941 | 4.50e-29 | 117 |
| Msa0330540 | AT5G44030.3 | 28.053 | 303 | 204 | 5 | 1 | 297 | 459 | 753 | 1.76e-28 | 115 |
| Msa0330540 | AT5G44030.2 | 28.053 | 303 | 204 | 5 | 1 | 297 | 767 | 1061 | 4.09e-28 | 114 |
| Msa0330540 | AT5G44030.1 | 28.053 | 303 | 204 | 5 | 1 | 297 | 738 | 1032 | 6.40e-28 | 114 |
| Msa0330540 | AT5G64740.1 | 27.451 | 306 | 200 | 4 | 1 | 297 | 775 | 1067 | 1.02e-27 | 113 |
| Msa0330540 | AT4G18780.1 | 29.904 | 311 | 187 | 8 | 1 | 297 | 673 | 966 | 1.80e-27 | 112 |
| Msa0330540 | AT1G02730.1 | 30.000 | 280 | 172 | 6 | 1 | 269 | 874 | 1140 | 8.75e-27 | 110 |
| Msa0330540 | AT2G33100.2 | 30.797 | 276 | 174 | 6 | 1 | 269 | 731 | 996 | 1.64e-26 | 110 |
| Msa0330540 | AT2G33100.1 | 30.797 | 276 | 174 | 6 | 1 | 269 | 731 | 996 | 1.64e-26 | 110 |
| Msa0330540 | AT5G09870.1 | 26.000 | 300 | 212 | 3 | 1 | 297 | 760 | 1052 | 2.95e-26 | 109 |
| Msa0330540 | AT2G21770.1 | 25.914 | 301 | 211 | 4 | 1 | 297 | 778 | 1070 | 2.53e-25 | 106 |
| Msa0330540 | AT4G39350.1 | 26.000 | 300 | 212 | 3 | 1 | 297 | 774 | 1066 | 1.56e-24 | 103 |
| Msa0330540 | AT5G16910.1 | 27.857 | 280 | 177 | 5 | 1 | 269 | 838 | 1103 | 8.41e-24 | 102 |
| Msa0330540 | AT4G38190.1 | 27.143 | 280 | 179 | 5 | 1 | 269 | 799 | 1064 | 6.26e-23 | 99.4 |
| Msa0330540 | AT3G03050.1 | 28.214 | 280 | 176 | 5 | 1 | 269 | 838 | 1103 | 2.12e-22 | 97.8 |
| Msa0330540 | AT2G32620.2 | 43.056 | 72 | 41 | 0 | 1 | 72 | 451 | 522 | 1.60e-13 | 71.2 |
Find 72 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTTGGTAAAATCCAATTT+AGG | 0.109508 | 2_4:-45065346 | Msa0330540:CDS |
| AGCACTTGTTATTAAGATTT+TGG | 0.119897 | 2_4:-45064465 | Msa0330540:CDS |
| CTACAAGAGTATAAAGTAAA+AGG | 0.191998 | 2_4:-45064734 | Msa0330540:CDS |
| TCAACAAGTGTATGGTTTAT+AGG | 0.235726 | 2_4:-45064662 | Msa0330540:CDS |
| CCTGTTATGGGTACCCTCTT+TGG | 0.238815 | 2_4:-45065362 | Msa0330540:CDS |
| CTTCAGATGGGCTGGTTATA+TGG | 0.244829 | 2_4:-45065566 | None:intergenic |
| AAGACAAGCCAGCCCTAAAT+TGG | 0.251195 | 2_4:+45065333 | None:intergenic |
| AGTCCAACTTCTGGTGTTAT+TGG | 0.253634 | 2_4:-45064572 | Msa0330540:CDS |
| CAGGAGTAATATCAACTTAT+AGG | 0.258509 | 2_4:+45064251 | None:intergenic |
| CTTATTGTTGGCTTACCAAT+TGG | 0.259289 | 2_4:-45065313 | Msa0330540:CDS |
| CCCGAGCCAACCGCGTTTAC+AGG | 0.262333 | 2_4:-45065473 | Msa0330540:CDS |
| TAGCAAGCATTCTCCTGTTA+TGG | 0.266654 | 2_4:-45065375 | Msa0330540:CDS |
| AGTGCCATGCTTAAGCTCTT+AGG | 0.270075 | 2_4:-45064632 | Msa0330540:CDS |
| CTTTGGTAAAATCCAATTTA+GGG | 0.273325 | 2_4:-45065345 | Msa0330540:CDS |
| TTGTTTGCTAGGGGTAAATA+TGG | 0.302310 | 2_4:-45064344 | Msa0330540:CDS |
| TGTATCTAGTAGTTTGTTAC+TGG | 0.314730 | 2_4:-45064382 | Msa0330540:CDS |
| AGCAAGCATTCTCCTGTTAT+GGG | 0.321276 | 2_4:-45065374 | Msa0330540:CDS |
| TTATTGTTGGCTTACCAATT+GGG | 0.340053 | 2_4:-45065312 | Msa0330540:CDS |
| GGGCTGGCTTGTCTTATTGT+TGG | 0.343431 | 2_4:-45065325 | Msa0330540:CDS |
| GCCTGTAAACGCGGTTGGCT+CGG | 0.353153 | 2_4:+45065472 | None:intergenic |
| TACCAATTGGGGTCTGCGTT+CGG | 0.380901 | 2_4:-45065300 | Msa0330540:CDS |
| TTCTGAAAGGGTTGTTTGCT+AGG | 0.385850 | 2_4:-45064355 | Msa0330540:CDS |
| AGTGGGAAAGAGTGTGGAAT+AGG | 0.391608 | 2_4:-45064422 | Msa0330540:CDS |
| ACTGTCTTATTCCAGGGAGC+TGG | 0.397150 | 2_4:-45064803 | Msa0330540:intron |
| CCAAAGAGGGTACCCATAAC+AGG | 0.401351 | 2_4:+45065362 | None:intergenic |
| TATTCCAGGGAGCTGGGCTA+TGG | 0.415813 | 2_4:-45064796 | Msa0330540:intron |
| CCTGTAAACGCGGTTGGCTC+GGG | 0.421920 | 2_4:+45065473 | None:intergenic |
| TGAATATGCAAAGGAAAGGT+TGG | 0.428367 | 2_4:-45065514 | Msa0330540:CDS |
| GACCGAACGCAGACCCCAAT+TGG | 0.428493 | 2_4:+45065298 | None:intergenic |
| CAACAAAAGAGATGGTCTTC+AGG | 0.429438 | 2_4:-45065416 | Msa0330540:CDS |
| GTGCCATGCTTAAGCTCTTA+GGG | 0.430274 | 2_4:-45064631 | Msa0330540:CDS |
| GCAAACAACCCTTTCAGAAA+TGG | 0.433149 | 2_4:+45064359 | None:intergenic |
| TGACTTGAAAATGGTAGATA+AGG | 0.439979 | 2_4:+45064316 | None:intergenic |
| GTTACTGGCCATTTCTGAAA+GGG | 0.448294 | 2_4:-45064367 | Msa0330540:CDS |
| CAATAAGATCAACAAGTGTA+TGG | 0.456139 | 2_4:-45064670 | Msa0330540:CDS |
| GTTGTGCCAACCACAAAAGC+TGG | 0.457175 | 2_4:+45064509 | None:intergenic |
| CATTGTAGTAAGTAATCCTC+CGG | 0.471086 | 2_4:+45065442 | None:intergenic |
| TGTCAACTGCACAAGCAAAA+TGG | 0.478341 | 2_4:+45064487 | None:intergenic |
| GGTAAAATCCAATTTAGGGC+TGG | 0.479956 | 2_4:-45065341 | Msa0330540:CDS |
| TGTTTGCTAGGGGTAAATAT+GGG | 0.481543 | 2_4:-45064343 | Msa0330540:CDS |
| TCTGAAAGGGTTGTTTGCTA+GGG | 0.487780 | 2_4:-45064354 | Msa0330540:CDS |
| CAAAAGGAAAGTCCAACTTC+TGG | 0.490074 | 2_4:-45064581 | Msa0330540:CDS |
| TACAAGAGTATAAAGTAAAA+GGG | 0.495125 | 2_4:-45064733 | Msa0330540:CDS |
| AGTCTTTGAAGTAACACAAA+AGG | 0.498554 | 2_4:-45064597 | Msa0330540:CDS |
| ATATCAGAAGATGTACCAAC+TGG | 0.500267 | 2_4:-45065539 | Msa0330540:CDS |
| GCGTTTACAGGCTGTGCTCC+CGG | 0.502923 | 2_4:-45065461 | Msa0330540:CDS |
| GACTTGAAAATGGTAGATAA+GGG | 0.503820 | 2_4:+45064317 | None:intergenic |
| CTGTCTTATTCCAGGGAGCT+GGG | 0.505938 | 2_4:-45064802 | Msa0330540:intron |
| TATTGTTGGCTTACCAATTG+GGG | 0.508021 | 2_4:-45065311 | Msa0330540:CDS |
| TGATTATGCAATATGCAACT+AGG | 0.523140 | 2_4:+45065255 | None:intergenic |
| CTTTGCATATTCAATCCAGT+TGG | 0.535136 | 2_4:+45065524 | None:intergenic |
| GATTATGCAATATGCAACTA+GGG | 0.540386 | 2_4:+45065256 | None:intergenic |
| TGTTACTGGCCATTTCTGAA+AGG | 0.550252 | 2_4:-45064368 | Msa0330540:CDS |
| TCTCCAATAACACCAGAAGT+TGG | 0.551519 | 2_4:+45064569 | None:intergenic |
| TGCAATTAGAAGCTCATAGT+GGG | 0.552228 | 2_4:-45064439 | Msa0330540:CDS |
| TGCTAAAGAAGACAACTGTA+AGG | 0.565575 | 2_4:+45065393 | None:intergenic |
| GTGCAATTAGAAGCTCATAG+TGG | 0.566989 | 2_4:-45064440 | Msa0330540:CDS |
| CTGAAAGGGTTGTTTGCTAG+GGG | 0.575876 | 2_4:-45064353 | Msa0330540:CDS |
| TTGTGCCAACCACAAAAGCT+GGG | 0.580530 | 2_4:+45064510 | None:intergenic |
| TTGGTGGAACAATCAGAGAA+TGG | 0.583369 | 2_4:-45064696 | Msa0330540:CDS |
| GCACAGCCTGTAAACGCGGT+TGG | 0.586028 | 2_4:+45065467 | None:intergenic |
| ATTGGAGATGATGCAAATGC+TGG | 0.605052 | 2_4:-45064554 | Msa0330540:CDS |
| CAATGATCCAACAAAAGAGA+TGG | 0.612047 | 2_4:-45065424 | Msa0330540:CDS |
| CAACTGGATTGAATATGCAA+AGG | 0.619420 | 2_4:-45065523 | Msa0330540:CDS |
| ATTGTAGTAAGTAATCCTCC+GGG | 0.635850 | 2_4:+45065443 | None:intergenic |
| GGATTGAATATGCAAAGGAA+AGG | 0.635952 | 2_4:-45065518 | Msa0330540:CDS |
| GCTCATAGTGGGAAAGAGTG+TGG | 0.637563 | 2_4:-45064428 | Msa0330540:CDS |
| TATCCCTAAGAGCTTAAGCA+TGG | 0.651527 | 2_4:+45064628 | None:intergenic |
| GGGAGCACAGCCTGTAAACG+CGG | 0.667882 | 2_4:+45065463 | None:intergenic |
| TTTACAGGCTGTGCTCCCGG+AGG | 0.680678 | 2_4:-45065458 | Msa0330540:CDS |
| TGTGCCAACCACAAAAGCTG+GGG | 0.694857 | 2_4:+45064511 | None:intergenic |
| GAGATGATGCAAATGCTGGT+AGG | 0.699231 | 2_4:-45064550 | Msa0330540:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGGAAATAATATAACAA+CGG | - | chr2_4:45064869-45064888 | Msa0330540:intron | 15.0% |
| !!! | TTTTGGAAATAATATAACAA+CGG | - | chr2_4:45064869-45064888 | Msa0330540:intron | 15.0% |
| !! | CATTTAATCATAAAATCAGT+TGG | - | chr2_4:45064707-45064726 | Msa0330540:CDS | 20.0% |
| !! | CAAAAACTGTTAAAATTAGT+CGG | + | chr2_4:45064854-45064873 | None:intergenic | 20.0% |
| !!! | TACAAGAGTATAAAGTAAAA+GGG | - | chr2_4:45065089-45065108 | Msa0330540:intron | 20.0% |
| !! | CATTTAATCATAAAATCAGT+TGG | - | chr2_4:45064707-45064726 | Msa0330540:CDS | 20.0% |
| !! | CAAAAACTGTTAAAATTAGT+CGG | + | chr2_4:45064854-45064873 | None:intergenic | 20.0% |
| !!! | TACAAGAGTATAAAGTAAAA+GGG | - | chr2_4:45065089-45065108 | Msa0330540:intron | 20.0% |
| !! | AAATTGGATTTTACCAAAGA+GGG | + | chr2_4:45064476-45064495 | None:intergenic | 25.0% |
| !! | TAAATTGGATTTTACCAAAG+AGG | + | chr2_4:45064477-45064496 | None:intergenic | 25.0% |
| ! | TCTTTGGTAAAATCCAATTT+AGG | - | chr2_4:45064476-45064495 | Msa0330540:CDS | 25.0% |
| ! | CTTTGGTAAAATCCAATTTA+GGG | - | chr2_4:45064477-45064496 | Msa0330540:CDS | 25.0% |
| !! | CTCAATGTTTAATTTAACCT+TGG | + | chr2_4:45064644-45064663 | None:intergenic | 25.0% |
| !!! | CGACTAATTTTAACAGTTTT+TGG | - | chr2_4:45064852-45064871 | Msa0330540:intron | 25.0% |
| ! | GAAATAATATAACAACGGTT+AGG | - | chr2_4:45064874-45064893 | Msa0330540:intron | 25.0% |
| !! | CTACAAGAGTATAAAGTAAA+AGG | - | chr2_4:45065088-45065107 | Msa0330540:intron | 25.0% |
| !! | AAGGGTTTTCATTAAGATAT+TGG | - | chr2_4:45065107-45065126 | Msa0330540:intron | 25.0% |
| !!! | AGCACTTGTTATTAAGATTT+TGG | - | chr2_4:45065357-45065376 | Msa0330540:CDS | 25.0% |
| !!! | GCACTTGTTATTAAGATTTT+GGG | - | chr2_4:45065358-45065377 | Msa0330540:CDS | 25.0% |
| !!! | CACTTGTTATTAAGATTTTG+GGG | - | chr2_4:45065359-45065378 | Msa0330540:CDS | 25.0% |
| !!! | ACTTGTTATTAAGATTTTGG+GGG | - | chr2_4:45065360-45065379 | Msa0330540:CDS | 25.0% |
| !! | AAATTGGATTTTACCAAAGA+GGG | + | chr2_4:45064476-45064495 | None:intergenic | 25.0% |
| !! | TAAATTGGATTTTACCAAAG+AGG | + | chr2_4:45064477-45064496 | None:intergenic | 25.0% |
| ! | TCTTTGGTAAAATCCAATTT+AGG | - | chr2_4:45064476-45064495 | Msa0330540:CDS | 25.0% |
| ! | CTTTGGTAAAATCCAATTTA+GGG | - | chr2_4:45064477-45064496 | Msa0330540:CDS | 25.0% |
| !! | CTCAATGTTTAATTTAACCT+TGG | + | chr2_4:45064644-45064663 | None:intergenic | 25.0% |
| !!! | CGACTAATTTTAACAGTTTT+TGG | - | chr2_4:45064852-45064871 | Msa0330540:intron | 25.0% |
| ! | GAAATAATATAACAACGGTT+AGG | - | chr2_4:45064874-45064893 | Msa0330540:intron | 25.0% |
| !! | CTACAAGAGTATAAAGTAAA+AGG | - | chr2_4:45065088-45065107 | Msa0330540:intron | 25.0% |
| !! | AAGGGTTTTCATTAAGATAT+TGG | - | chr2_4:45065107-45065126 | Msa0330540:intron | 25.0% |
| !!! | AGCACTTGTTATTAAGATTT+TGG | - | chr2_4:45065357-45065376 | Msa0330540:CDS | 25.0% |
| !!! | GCACTTGTTATTAAGATTTT+GGG | - | chr2_4:45065358-45065377 | Msa0330540:CDS | 25.0% |
| !!! | CACTTGTTATTAAGATTTTG+GGG | - | chr2_4:45065359-45065378 | Msa0330540:CDS | 25.0% |
| !!! | ACTTGTTATTAAGATTTTGG+GGG | - | chr2_4:45065360-45065379 | Msa0330540:CDS | 25.0% |
| !! | TTATTGTTGGCTTACCAATT+GGG | - | chr2_4:45064510-45064529 | Msa0330540:CDS | 30.0% |
| GATTATGCAATATGCAACTA+GGG | + | chr2_4:45064569-45064588 | None:intergenic | 30.0% | |
| TGATTATGCAATATGCAACT+AGG | + | chr2_4:45064570-45064589 | None:intergenic | 30.0% | |
| TGTTAAAATTAGTCGGAGAT+TGG | + | chr2_4:45064847-45064866 | None:intergenic | 30.0% | |
| ! | GGTTTTCATTAAGATATTGG+TGG | - | chr2_4:45065110-45065129 | Msa0330540:intron | 30.0% |
| CAATAAGATCAACAAGTGTA+TGG | - | chr2_4:45065152-45065171 | Msa0330540:intron | 30.0% | |
| TCAACAAGTGTATGGTTTAT+AGG | - | chr2_4:45065160-45065179 | Msa0330540:intron | 30.0% | |
| !! | AGTCTTTGAAGTAACACAAA+AGG | - | chr2_4:45065225-45065244 | Msa0330540:intron | 30.0% |
| !! | TGTATCTAGTAGTTTGTTAC+TGG | - | chr2_4:45065440-45065459 | Msa0330540:CDS | 30.0% |
| GACTTGAAAATGGTAGATAA+GGG | + | chr2_4:45065508-45065527 | None:intergenic | 30.0% | |
| TGACTTGAAAATGGTAGATA+AGG | + | chr2_4:45065509-45065528 | None:intergenic | 30.0% | |
| !! | AAAAAGTGCTGACTTGAAAA+TGG | + | chr2_4:45065518-45065537 | None:intergenic | 30.0% |
| !! | TTATTGTTGGCTTACCAATT+GGG | - | chr2_4:45064510-45064529 | Msa0330540:CDS | 30.0% |
| GATTATGCAATATGCAACTA+GGG | + | chr2_4:45064569-45064588 | None:intergenic | 30.0% | |
| TGATTATGCAATATGCAACT+AGG | + | chr2_4:45064570-45064589 | None:intergenic | 30.0% | |
| TGTTAAAATTAGTCGGAGAT+TGG | + | chr2_4:45064847-45064866 | None:intergenic | 30.0% | |
| ! | GGTTTTCATTAAGATATTGG+TGG | - | chr2_4:45065110-45065129 | Msa0330540:intron | 30.0% |
| CAATAAGATCAACAAGTGTA+TGG | - | chr2_4:45065152-45065171 | Msa0330540:intron | 30.0% | |
| TCAACAAGTGTATGGTTTAT+AGG | - | chr2_4:45065160-45065179 | Msa0330540:intron | 30.0% | |
| !! | AGTCTTTGAAGTAACACAAA+AGG | - | chr2_4:45065225-45065244 | Msa0330540:intron | 30.0% |
| !! | TGTATCTAGTAGTTTGTTAC+TGG | - | chr2_4:45065440-45065459 | Msa0330540:CDS | 30.0% |
| GACTTGAAAATGGTAGATAA+GGG | + | chr2_4:45065508-45065527 | None:intergenic | 30.0% | |
| TGACTTGAAAATGGTAGATA+AGG | + | chr2_4:45065509-45065528 | None:intergenic | 30.0% | |
| !! | AAAAAGTGCTGACTTGAAAA+TGG | + | chr2_4:45065518-45065537 | None:intergenic | 30.0% |
| ATATCAGAAGATGTACCAAC+TGG | - | chr2_4:45064283-45064302 | Msa0330540:CDS | 35.0% | |
| CTTTGCATATTCAATCCAGT+TGG | + | chr2_4:45064301-45064320 | None:intergenic | 35.0% | |
| CAACTGGATTGAATATGCAA+AGG | - | chr2_4:45064299-45064318 | Msa0330540:CDS | 35.0% | |
| GGATTGAATATGCAAAGGAA+AGG | - | chr2_4:45064304-45064323 | Msa0330540:CDS | 35.0% | |
| TGAATATGCAAAGGAAAGGT+TGG | - | chr2_4:45064308-45064327 | Msa0330540:CDS | 35.0% | |
| ATTGTAGTAAGTAATCCTCC+GGG | + | chr2_4:45064382-45064401 | None:intergenic | 35.0% | |
| CATTGTAGTAAGTAATCCTC+CGG | + | chr2_4:45064383-45064402 | None:intergenic | 35.0% | |
| CAATGATCCAACAAAAGAGA+TGG | - | chr2_4:45064398-45064417 | Msa0330540:CDS | 35.0% | |
| TGCTAAAGAAGACAACTGTA+AGG | + | chr2_4:45064432-45064451 | None:intergenic | 35.0% | |
| !! | CTTATTGTTGGCTTACCAAT+TGG | - | chr2_4:45064509-45064528 | Msa0330540:CDS | 35.0% |
| !! | TATTGTTGGCTTACCAATTG+GGG | - | chr2_4:45064511-45064530 | Msa0330540:CDS | 35.0% |
| ! | TAACACCAGTATTTTTCCTG+AGG | - | chr2_4:45064591-45064610 | Msa0330540:CDS | 35.0% |
| TCTAACCTCAGGAAAAATAC+TGG | + | chr2_4:45064599-45064618 | None:intergenic | 35.0% | |
| GAATGTCAATATCTAACCTC+AGG | + | chr2_4:45064610-45064629 | None:intergenic | 35.0% | |
| !! | ACATTCAATTTCTAGTGCCA+AGG | - | chr2_4:45064624-45064643 | Msa0330540:CDS | 35.0% |
| TAACCAGCTTGCAATTAACT+AGG | + | chr2_4:45064748-45064767 | None:intergenic | 35.0% | |
| !! | CAAGTTGGTTAAGCTTAGTT+AGG | + | chr2_4:45064804-45064823 | None:intergenic | 35.0% |
| ATTAGTTGCAACTTGCAAGT+TGG | + | chr2_4:45064819-45064838 | None:intergenic | 35.0% | |
| TGGAATAAGACAGTGTGAAA+AGG | + | chr2_4:45065013-45065032 | None:intergenic | 35.0% | |
| !! | TTTTCACACTGTCTTATTCC+AGG | - | chr2_4:45065012-45065031 | Msa0330540:intron | 35.0% |
| ! | TTTCACACTGTCTTATTCCA+GGG | - | chr2_4:45065013-45065032 | Msa0330540:intron | 35.0% |
| TGCAATTAGAAGCTCATAGT+GGG | - | chr2_4:45065383-45065402 | Msa0330540:CDS | 35.0% | |
| ! | TTGTTTGCTAGGGGTAAATA+TGG | - | chr2_4:45065478-45065497 | Msa0330540:CDS | 35.0% |
| ! | TGTTTGCTAGGGGTAAATAT+GGG | - | chr2_4:45065479-45065498 | Msa0330540:CDS | 35.0% |
| ATATCAGAAGATGTACCAAC+TGG | - | chr2_4:45064283-45064302 | Msa0330540:CDS | 35.0% | |
| CTTTGCATATTCAATCCAGT+TGG | + | chr2_4:45064301-45064320 | None:intergenic | 35.0% | |
| CAACTGGATTGAATATGCAA+AGG | - | chr2_4:45064299-45064318 | Msa0330540:CDS | 35.0% | |
| GGATTGAATATGCAAAGGAA+AGG | - | chr2_4:45064304-45064323 | Msa0330540:CDS | 35.0% | |
| TGAATATGCAAAGGAAAGGT+TGG | - | chr2_4:45064308-45064327 | Msa0330540:CDS | 35.0% | |
| ATTGTAGTAAGTAATCCTCC+GGG | + | chr2_4:45064382-45064401 | None:intergenic | 35.0% | |
| CATTGTAGTAAGTAATCCTC+CGG | + | chr2_4:45064383-45064402 | None:intergenic | 35.0% | |
| CAATGATCCAACAAAAGAGA+TGG | - | chr2_4:45064398-45064417 | Msa0330540:CDS | 35.0% | |
| TGCTAAAGAAGACAACTGTA+AGG | + | chr2_4:45064432-45064451 | None:intergenic | 35.0% | |
| !! | CTTATTGTTGGCTTACCAAT+TGG | - | chr2_4:45064509-45064528 | Msa0330540:CDS | 35.0% |
| !! | TATTGTTGGCTTACCAATTG+GGG | - | chr2_4:45064511-45064530 | Msa0330540:CDS | 35.0% |
| ! | TAACACCAGTATTTTTCCTG+AGG | - | chr2_4:45064591-45064610 | Msa0330540:CDS | 35.0% |
| TCTAACCTCAGGAAAAATAC+TGG | + | chr2_4:45064599-45064618 | None:intergenic | 35.0% | |
| GAATGTCAATATCTAACCTC+AGG | + | chr2_4:45064610-45064629 | None:intergenic | 35.0% | |
| !! | ACATTCAATTTCTAGTGCCA+AGG | - | chr2_4:45064624-45064643 | Msa0330540:CDS | 35.0% |
| TAACCAGCTTGCAATTAACT+AGG | + | chr2_4:45064748-45064767 | None:intergenic | 35.0% | |
| !! | CAAGTTGGTTAAGCTTAGTT+AGG | + | chr2_4:45064804-45064823 | None:intergenic | 35.0% |
| ATTAGTTGCAACTTGCAAGT+TGG | + | chr2_4:45064819-45064838 | None:intergenic | 35.0% | |
| TGGAATAAGACAGTGTGAAA+AGG | + | chr2_4:45065013-45065032 | None:intergenic | 35.0% | |
| !! | TTTTCACACTGTCTTATTCC+AGG | - | chr2_4:45065012-45065031 | Msa0330540:intron | 35.0% |
| ! | TTTCACACTGTCTTATTCCA+GGG | - | chr2_4:45065013-45065032 | Msa0330540:intron | 35.0% |
| TGCAATTAGAAGCTCATAGT+GGG | - | chr2_4:45065383-45065402 | Msa0330540:CDS | 35.0% | |
| ! | TTGTTTGCTAGGGGTAAATA+TGG | - | chr2_4:45065478-45065497 | Msa0330540:CDS | 35.0% |
| ! | TGTTTGCTAGGGGTAAATAT+GGG | - | chr2_4:45065479-45065498 | Msa0330540:CDS | 35.0% |
| ! | CTGAAGACCATCTCTTTTGT+TGG | + | chr2_4:45064408-45064427 | None:intergenic | 40.0% |
| CAACAAAAGAGATGGTCTTC+AGG | - | chr2_4:45064406-45064425 | Msa0330540:CDS | 40.0% | |
| TAGCAAGCATTCTCCTGTTA+TGG | - | chr2_4:45064447-45064466 | Msa0330540:CDS | 40.0% | |
| AGCAAGCATTCTCCTGTTAT+GGG | - | chr2_4:45064448-45064467 | Msa0330540:CDS | 40.0% | |
| ! | GGTAAAATCCAATTTAGGGC+TGG | - | chr2_4:45064481-45064500 | Msa0330540:CDS | 40.0% |
| GTACCTAGTTAATTGCAAGC+TGG | - | chr2_4:45064742-45064761 | Msa0330540:CDS | 40.0% | |
| TTGGTGGAACAATCAGAGAA+TGG | - | chr2_4:45065126-45065145 | Msa0330540:intron | 40.0% | |
| TATCCCTAAGAGCTTAAGCA+TGG | + | chr2_4:45065197-45065216 | None:intergenic | 40.0% | |
| CAAAAGGAAAGTCCAACTTC+TGG | - | chr2_4:45065241-45065260 | Msa0330540:CDS | 40.0% | |
| !! | AGTCCAACTTCTGGTGTTAT+TGG | - | chr2_4:45065250-45065269 | Msa0330540:CDS | 40.0% |
| TCTCCAATAACACCAGAAGT+TGG | + | chr2_4:45065256-45065275 | None:intergenic | 40.0% | |
| ATTGGAGATGATGCAAATGC+TGG | - | chr2_4:45065268-45065287 | Msa0330540:CDS | 40.0% | |
| TGTCAACTGCACAAGCAAAA+TGG | + | chr2_4:45065338-45065357 | None:intergenic | 40.0% | |
| GTGCAATTAGAAGCTCATAG+TGG | - | chr2_4:45065382-45065401 | Msa0330540:CDS | 40.0% | |
| TGTTACTGGCCATTTCTGAA+AGG | - | chr2_4:45065454-45065473 | Msa0330540:CDS | 40.0% | |
| ! | GTTACTGGCCATTTCTGAAA+GGG | - | chr2_4:45065455-45065474 | Msa0330540:CDS | 40.0% |
| GCAAACAACCCTTTCAGAAA+TGG | + | chr2_4:45065466-45065485 | None:intergenic | 40.0% | |
| ! | TTCTGAAAGGGTTGTTTGCT+AGG | - | chr2_4:45065467-45065486 | Msa0330540:CDS | 40.0% |
| ! | TCTGAAAGGGTTGTTTGCTA+GGG | - | chr2_4:45065468-45065487 | Msa0330540:CDS | 40.0% |
| ! | CTGAAGACCATCTCTTTTGT+TGG | + | chr2_4:45064408-45064427 | None:intergenic | 40.0% |
| CAACAAAAGAGATGGTCTTC+AGG | - | chr2_4:45064406-45064425 | Msa0330540:CDS | 40.0% | |
| TAGCAAGCATTCTCCTGTTA+TGG | - | chr2_4:45064447-45064466 | Msa0330540:CDS | 40.0% | |
| AGCAAGCATTCTCCTGTTAT+GGG | - | chr2_4:45064448-45064467 | Msa0330540:CDS | 40.0% | |
| ! | GGTAAAATCCAATTTAGGGC+TGG | - | chr2_4:45064481-45064500 | Msa0330540:CDS | 40.0% |
| GTACCTAGTTAATTGCAAGC+TGG | - | chr2_4:45064742-45064761 | Msa0330540:CDS | 40.0% | |
| TTGGTGGAACAATCAGAGAA+TGG | - | chr2_4:45065126-45065145 | Msa0330540:intron | 40.0% | |
| TATCCCTAAGAGCTTAAGCA+TGG | + | chr2_4:45065197-45065216 | None:intergenic | 40.0% | |
| CAAAAGGAAAGTCCAACTTC+TGG | - | chr2_4:45065241-45065260 | Msa0330540:CDS | 40.0% | |
| !! | AGTCCAACTTCTGGTGTTAT+TGG | - | chr2_4:45065250-45065269 | Msa0330540:CDS | 40.0% |
| TCTCCAATAACACCAGAAGT+TGG | + | chr2_4:45065256-45065275 | None:intergenic | 40.0% | |
| ATTGGAGATGATGCAAATGC+TGG | - | chr2_4:45065268-45065287 | Msa0330540:CDS | 40.0% | |
| TGTCAACTGCACAAGCAAAA+TGG | + | chr2_4:45065338-45065357 | None:intergenic | 40.0% | |
| GTGCAATTAGAAGCTCATAG+TGG | - | chr2_4:45065382-45065401 | Msa0330540:CDS | 40.0% | |
| TGTTACTGGCCATTTCTGAA+AGG | - | chr2_4:45065454-45065473 | Msa0330540:CDS | 40.0% | |
| ! | GTTACTGGCCATTTCTGAAA+GGG | - | chr2_4:45065455-45065474 | Msa0330540:CDS | 40.0% |
| GCAAACAACCCTTTCAGAAA+TGG | + | chr2_4:45065466-45065485 | None:intergenic | 40.0% | |
| ! | TTCTGAAAGGGTTGTTTGCT+AGG | - | chr2_4:45065467-45065486 | Msa0330540:CDS | 40.0% |
| ! | TCTGAAAGGGTTGTTTGCTA+GGG | - | chr2_4:45065468-45065487 | Msa0330540:CDS | 40.0% |
| AAGACAAGCCAGCCCTAAAT+TGG | + | chr2_4:45064492-45064511 | None:intergenic | 45.0% | |
| AGTGCCATGCTTAAGCTCTT+AGG | - | chr2_4:45065190-45065209 | Msa0330540:intron | 45.0% | |
| GTGCCATGCTTAAGCTCTTA+GGG | - | chr2_4:45065191-45065210 | Msa0330540:intron | 45.0% | |
| GAGATGATGCAAATGCTGGT+AGG | - | chr2_4:45065272-45065291 | Msa0330540:CDS | 45.0% | |
| TTGTGCCAACCACAAAAGCT+GGG | + | chr2_4:45065315-45065334 | None:intergenic | 45.0% | |
| ! | AGTGGGAAAGAGTGTGGAAT+AGG | - | chr2_4:45065400-45065419 | Msa0330540:CDS | 45.0% |
| ! | CTGAAAGGGTTGTTTGCTAG+GGG | - | chr2_4:45065469-45065488 | Msa0330540:CDS | 45.0% |
| AAGACAAGCCAGCCCTAAAT+TGG | + | chr2_4:45064492-45064511 | None:intergenic | 45.0% | |
| AGTGCCATGCTTAAGCTCTT+AGG | - | chr2_4:45065190-45065209 | Msa0330540:intron | 45.0% | |
| GTGCCATGCTTAAGCTCTTA+GGG | - | chr2_4:45065191-45065210 | Msa0330540:intron | 45.0% | |
| GAGATGATGCAAATGCTGGT+AGG | - | chr2_4:45065272-45065291 | Msa0330540:CDS | 45.0% | |
| TTGTGCCAACCACAAAAGCT+GGG | + | chr2_4:45065315-45065334 | None:intergenic | 45.0% | |
| ! | AGTGGGAAAGAGTGTGGAAT+AGG | - | chr2_4:45065400-45065419 | Msa0330540:CDS | 45.0% |
| ! | CTGAAAGGGTTGTTTGCTAG+GGG | - | chr2_4:45065469-45065488 | Msa0330540:CDS | 45.0% |
| !! | CCAAAGAGGGTACCCATAAC+AGG | + | chr2_4:45064463-45064482 | None:intergenic | 50.0% |
| CCTGTTATGGGTACCCTCTT+TGG | - | chr2_4:45064460-45064479 | Msa0330540:CDS | 50.0% | |
| !! | GGGCTGGCTTGTCTTATTGT+TGG | - | chr2_4:45064497-45064516 | Msa0330540:CDS | 50.0% |
| TACCAATTGGGGTCTGCGTT+CGG | - | chr2_4:45064522-45064541 | Msa0330540:CDS | 50.0% | |
| ! | ACTGTCTTATTCCAGGGAGC+TGG | - | chr2_4:45065019-45065038 | Msa0330540:intron | 50.0% |
| ! | CTGTCTTATTCCAGGGAGCT+GGG | - | chr2_4:45065020-45065039 | Msa0330540:intron | 50.0% |
| ! | TGATGAGTCCCCAGCTTTTG+TGG | - | chr2_4:45065303-45065322 | Msa0330540:CDS | 50.0% |
| TGTGCCAACCACAAAAGCTG+GGG | + | chr2_4:45065314-45065333 | None:intergenic | 50.0% | |
| GTTGTGCCAACCACAAAAGC+TGG | + | chr2_4:45065316-45065335 | None:intergenic | 50.0% | |
| ! | GCTCATAGTGGGAAAGAGTG+TGG | - | chr2_4:45065394-45065413 | Msa0330540:CDS | 50.0% |
| !! | CCAAAGAGGGTACCCATAAC+AGG | + | chr2_4:45064463-45064482 | None:intergenic | 50.0% |
| CCTGTTATGGGTACCCTCTT+TGG | - | chr2_4:45064460-45064479 | Msa0330540:CDS | 50.0% | |
| !! | GGGCTGGCTTGTCTTATTGT+TGG | - | chr2_4:45064497-45064516 | Msa0330540:CDS | 50.0% |
| TACCAATTGGGGTCTGCGTT+CGG | - | chr2_4:45064522-45064541 | Msa0330540:CDS | 50.0% | |
| ! | ACTGTCTTATTCCAGGGAGC+TGG | - | chr2_4:45065019-45065038 | Msa0330540:intron | 50.0% |
| ! | CTGTCTTATTCCAGGGAGCT+GGG | - | chr2_4:45065020-45065039 | Msa0330540:intron | 50.0% |
| ! | TGATGAGTCCCCAGCTTTTG+TGG | - | chr2_4:45065303-45065322 | Msa0330540:CDS | 50.0% |
| TGTGCCAACCACAAAAGCTG+GGG | + | chr2_4:45065314-45065333 | None:intergenic | 50.0% | |
| GTTGTGCCAACCACAAAAGC+TGG | + | chr2_4:45065316-45065335 | None:intergenic | 50.0% | |
| ! | GCTCATAGTGGGAAAGAGTG+TGG | - | chr2_4:45065394-45065413 | Msa0330540:CDS | 50.0% |
| TATTCCAGGGAGCTGGGCTA+TGG | - | chr2_4:45065026-45065045 | Msa0330540:intron | 55.0% | |
| TAATCCATAGCCCAGCTCCC+TGG | + | chr2_4:45065033-45065052 | None:intergenic | 55.0% | |
| ! | GAGTCCCCAGCTTTTGTGGT+TGG | - | chr2_4:45065307-45065326 | Msa0330540:CDS | 55.0% |
| TATTCCAGGGAGCTGGGCTA+TGG | - | chr2_4:45065026-45065045 | Msa0330540:intron | 55.0% | |
| TAATCCATAGCCCAGCTCCC+TGG | + | chr2_4:45065033-45065052 | None:intergenic | 55.0% | |
| ! | GAGTCCCCAGCTTTTGTGGT+TGG | - | chr2_4:45065307-45065326 | Msa0330540:CDS | 55.0% |
| ! | CCTGTAAACGCGGTTGGCTC+GGG | + | chr2_4:45064352-45064371 | None:intergenic | 60.0% |
| ! | GCCTGTAAACGCGGTTGGCT+CGG | + | chr2_4:45064353-45064372 | None:intergenic | 60.0% |
| GCACAGCCTGTAAACGCGGT+TGG | + | chr2_4:45064358-45064377 | None:intergenic | 60.0% | |
| ! | GGGAGCACAGCCTGTAAACG+CGG | + | chr2_4:45064362-45064381 | None:intergenic | 60.0% |
| GCGTTTACAGGCTGTGCTCC+CGG | - | chr2_4:45064361-45064380 | Msa0330540:CDS | 60.0% | |
| TTTACAGGCTGTGCTCCCGG+AGG | - | chr2_4:45064364-45064383 | Msa0330540:CDS | 60.0% | |
| GACCGAACGCAGACCCCAAT+TGG | + | chr2_4:45064527-45064546 | None:intergenic | 60.0% | |
| ! | CCTGTAAACGCGGTTGGCTC+GGG | + | chr2_4:45064352-45064371 | None:intergenic | 60.0% |
| ! | GCCTGTAAACGCGGTTGGCT+CGG | + | chr2_4:45064353-45064372 | None:intergenic | 60.0% |
| GCACAGCCTGTAAACGCGGT+TGG | + | chr2_4:45064358-45064377 | None:intergenic | 60.0% | |
| ! | GGGAGCACAGCCTGTAAACG+CGG | + | chr2_4:45064362-45064381 | None:intergenic | 60.0% |
| GCGTTTACAGGCTGTGCTCC+CGG | - | chr2_4:45064361-45064380 | Msa0330540:CDS | 60.0% | |
| TTTACAGGCTGTGCTCCCGG+AGG | - | chr2_4:45064364-45064383 | Msa0330540:CDS | 60.0% | |
| GACCGAACGCAGACCCCAAT+TGG | + | chr2_4:45064527-45064546 | None:intergenic | 60.0% | |
| CCCGAGCCAACCGCGTTTAC+AGG | - | chr2_4:45064349-45064368 | Msa0330540:CDS | 65.0% | |
| CCCGAGCCAACCGCGTTTAC+AGG | - | chr2_4:45064349-45064368 | Msa0330540:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 45064262 | 45065582 | 45064262 | ID=Msa0330540;Name=Msa0330540 |
| chr2_4 | mRNA | 45064262 | 45065582 | 45064262 | ID=Msa0330540-mRNA-1;Parent=Msa0330540;Name=Msa0330540-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|0|0|1|1|1|2|0|299 |
| chr2_4 | exon | 45065232 | 45065582 | 45065232 | ID=Msa0330540-mRNA-1:exon:13732;Parent=Msa0330540-mRNA-1 |
| chr2_4 | exon | 45064262 | 45064810 | 45064262 | ID=Msa0330540-mRNA-1:exon:13731;Parent=Msa0330540-mRNA-1 |
| chr2_4 | CDS | 45065232 | 45065582 | 45065232 | ID=Msa0330540-mRNA-1:cds;Parent=Msa0330540-mRNA-1 |
| chr2_4 | CDS | 45064262 | 45064810 | 45064262 | ID=Msa0330540-mRNA-1:cds;Parent=Msa0330540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
