Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0298620 | XP_003596948.2 | 94.865 | 740 | 37 | 1 | 1 | 739 | 1 | 740 | 0.0 | 1437 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0298620 | sp|Q8RX83|CSLB3_ARATH | 45.623 | 754 | 369 | 9 | 8 | 732 | 10 | 751 | 0.0 | 651 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0298620 | G7ITV5 | 94.865 | 740 | 37 | 1 | 1 | 739 | 1 | 740 | 0.0 | 1437 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0220740 | Msa0298620 | 0.804694 | 1.910181e-49 | -8.615850e-47 |
| Msa0221060 | Msa0298620 | 0.800226 | 1.591921e-48 | -8.615850e-47 |
| Msa0223410 | Msa0298620 | -0.822418 | 2.394372e-53 | -8.615850e-47 |
| Msa0233300 | Msa0298620 | 0.802432 | 5.625574e-49 | -8.615850e-47 |
| Msa0298620 | Msa0330540 | 0.828971 | 6.682393e-55 | -8.615850e-47 |
| Msa0298620 | Msa0338110 | 0.814746 | 1.316707e-51 | -8.615850e-47 |
| Msa0298620 | Msa0340450 | 0.809324 | 2.002214e-50 | -8.615850e-47 |
| Msa0298620 | Msa0344690 | -0.835953 | 1.242558e-56 | -8.615850e-47 |
| Msa0298620 | Msa0371730 | 0.803823 | 2.900402e-49 | -8.615850e-47 |
| Msa0298620 | Msa0379640 | 0.808842 | 2.538794e-50 | -8.615850e-47 |
| Msa0298620 | Msa0420960 | 0.801660 | 8.106766e-49 | -8.615850e-47 |
| Msa0298620 | Msa0432300 | 0.801387 | 9.222427e-49 | -8.615850e-47 |
| Msa0298620 | Msa0469940 | -0.827664 | 1.380618e-54 | -8.615850e-47 |
| Msa0298620 | Msa0553460 | 0.809397 | 1.931200e-50 | -8.615850e-47 |
| Msa0298620 | Msa0558690 | 0.800104 | 1.685370e-48 | -8.615850e-47 |
| Msa0298620 | Msa0599890 | 0.815967 | 7.046267e-52 | -8.615850e-47 |
| Msa0298620 | Msa0607540 | 0.816620 | 5.033899e-52 | -8.615850e-47 |
| Msa0298620 | Msa0647830 | 0.801185 | 1.014266e-48 | -8.615850e-47 |
| Msa0298620 | Msa0657970 | 0.816138 | 6.454509e-52 | -8.615850e-47 |
| Msa0298620 | Msa0658570 | 0.830822 | 2.365217e-55 | -8.615850e-47 |
| Msa0298620 | Msa0690440 | 0.803492 | 3.396516e-49 | -8.615850e-47 |
| Msa0298620 | Msa0693380 | 0.812636 | 3.837724e-51 | -8.615850e-47 |
| Msa0298620 | Msa0723110 | 0.823547 | 1.306453e-53 | -8.615850e-47 |
| Msa0298620 | Msa0843250 | 0.822155 | 2.756041e-53 | -8.615850e-47 |
| Msa0298620 | Msa0909140 | 0.800284 | 1.549310e-48 | -8.615850e-47 |
| Msa0298620 | Msa0927380 | 0.811054 | 8.482714e-51 | -8.615850e-47 |
| Msa0298620 | Msa0969520 | 0.811564 | 6.573401e-51 | -8.615850e-47 |
| Msa0298620 | Msa1014540 | 0.817592 | 3.044814e-52 | -8.615850e-47 |
| Msa0298620 | Msa1075220 | -0.832844 | 7.496529e-56 | -8.615850e-47 |
| Msa0298620 | Msa1082500 | 0.818705 | 1.704653e-52 | -8.615850e-47 |
| Msa0298620 | Msa1090260 | 0.809321 | 2.004329e-50 | -8.615850e-47 |
| Msa0298620 | Msa1116130 | -0.817576 | 3.069242e-52 | -8.615850e-47 |
| Msa0298620 | Msa1121490 | 0.806864 | 6.687028e-50 | -8.615850e-47 |
| Msa0298620 | Msa1139000 | -0.817864 | 2.643877e-52 | -8.615850e-47 |
| Msa0298620 | Msa1144720 | -0.813398 | 2.612125e-51 | -8.615850e-47 |
| Msa0298620 | Msa1162550 | -0.837387 | 5.357937e-57 | -8.615850e-47 |
| Msa0298620 | Msa1233890 | 0.830686 | 2.553748e-55 | -8.615850e-47 |
| Msa0298620 | Msa1246500 | 0.809920 | 1.490389e-50 | -8.615850e-47 |
| Msa0298620 | Msa1249490 | 0.807592 | 4.688549e-50 | -8.615850e-47 |
| Msa0298620 | Msa1283860 | 0.808665 | 2.770626e-50 | -8.615850e-47 |
| Msa0298620 | Msa1284680 | 0.802764 | 4.805797e-49 | -8.615850e-47 |
| Msa0298620 | Msa1286760 | 0.800141 | 1.656675e-48 | -8.615850e-47 |
| Msa0298620 | Msa1322890 | 0.806232 | 9.089964e-50 | -8.615850e-47 |
| Msa0298620 | Msa1376890 | 0.826530 | 2.579433e-54 | -8.615850e-47 |
| Msa0298620 | Msa1390050 | 0.811659 | 6.269116e-51 | -8.615850e-47 |
| Msa0298620 | Msa1393320 | 0.844097 | 9.334618e-59 | -8.615850e-47 |
| Msa0298620 | Msa1419960 | 0.804704 | 1.900632e-49 | -8.615850e-47 |
| Msa0298620 | Msa1451620 | -0.816746 | 4.717285e-52 | -8.615850e-47 |
| Msa0298620 | Msa1464940 | 0.825063 | 5.748927e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0298620 | MtrunA17_Chr2g0322371 | 94.865 | 740 | 37 | 1 | 1 | 739 | 1 | 740 | 0.0 | 1437 |
| Msa0298620 | MtrunA17_Chr2g0322361 | 87.867 | 750 | 80 | 4 | 1 | 739 | 1 | 750 | 0.0 | 1343 |
| Msa0298620 | MtrunA17_Chr4g0025201 | 58.926 | 745 | 292 | 7 | 1 | 736 | 1 | 740 | 0.0 | 880 |
| Msa0298620 | MtrunA17_Chr2g0322351 | 57.507 | 746 | 295 | 8 | 1 | 736 | 1 | 734 | 0.0 | 837 |
| Msa0298620 | MtrunA17_Chr2g0322341 | 64.826 | 344 | 113 | 4 | 1 | 336 | 3 | 346 | 1.25e-154 | 453 |
| Msa0298620 | MtrunA17_Chr4g0073711 | 34.658 | 805 | 447 | 19 | 1 | 737 | 228 | 1021 | 1.30e-133 | 421 |
| Msa0298620 | MtrunA17_Chr3g0088821 | 32.611 | 831 | 453 | 20 | 1 | 739 | 248 | 1063 | 3.84e-132 | 418 |
| Msa0298620 | MtrunA17_Chr8g0379241 | 34.340 | 795 | 426 | 19 | 21 | 737 | 196 | 972 | 6.10e-132 | 415 |
| Msa0298620 | MtrunA17_Chr2g0284211 | 34.430 | 790 | 418 | 20 | 21 | 729 | 181 | 951 | 1.23e-131 | 414 |
| Msa0298620 | MtrunA17_Chr3g0102551 | 33.377 | 761 | 432 | 18 | 8 | 730 | 10 | 733 | 7.20e-131 | 405 |
| Msa0298620 | MtrunA17_Chr3g0102531 | 33.511 | 752 | 445 | 15 | 1 | 727 | 1 | 722 | 1.03e-130 | 404 |
| Msa0298620 | MtrunA17_Chr3g0137951 | 33.831 | 804 | 430 | 18 | 21 | 737 | 281 | 1069 | 2.51e-130 | 413 |
| Msa0298620 | MtrunA17_Chr2g0322331 | 53.665 | 382 | 163 | 6 | 365 | 736 | 1 | 378 | 4.02e-129 | 388 |
| Msa0298620 | MtrunA17_Chr1g0183381 | 32.783 | 787 | 449 | 17 | 8 | 729 | 107 | 878 | 2.67e-128 | 403 |
| Msa0298620 | MtrunA17_Chr3g0102541 | 33.768 | 767 | 427 | 20 | 1 | 727 | 1 | 726 | 8.74e-128 | 397 |
| Msa0298620 | MtrunA17_Chr7g0267731 | 31.687 | 830 | 458 | 18 | 1 | 739 | 160 | 971 | 9.73e-127 | 401 |
| Msa0298620 | MtrunA17_Chr8g0364641 | 32.500 | 800 | 460 | 19 | 1 | 737 | 182 | 964 | 1.36e-126 | 401 |
| Msa0298620 | MtrunA17_Chr8g0352231 | 31.990 | 794 | 444 | 18 | 29 | 739 | 283 | 1063 | 1.28e-124 | 398 |
| Msa0298620 | MtrunA17_Chr1g0201731 | 32.357 | 819 | 452 | 19 | 8 | 737 | 275 | 1080 | 6.41e-123 | 394 |
| Msa0298620 | MtrunA17_Chr4g0046401 | 33.238 | 701 | 435 | 17 | 45 | 734 | 57 | 735 | 6.48e-110 | 350 |
| Msa0298620 | MtrunA17_Chr5g0410641 | 29.752 | 847 | 431 | 21 | 8 | 709 | 252 | 1079 | 2.03e-107 | 353 |
| Msa0298620 | MtrunA17_Chr1g0165411 | 29.489 | 841 | 446 | 19 | 18 | 729 | 258 | 1080 | 1.48e-106 | 350 |
| Msa0298620 | MtrunA17_Chr4g0039801 | 29.200 | 863 | 454 | 19 | 8 | 729 | 273 | 1119 | 6.76e-106 | 349 |
| Msa0298620 | MtrunA17_Chr1g0186381 | 30.610 | 771 | 459 | 20 | 4 | 738 | 6 | 736 | 1.47e-105 | 339 |
| Msa0298620 | MtrunA17_Chr2g0298581 | 31.329 | 715 | 443 | 15 | 16 | 713 | 8 | 691 | 5.10e-105 | 336 |
| Msa0298620 | MtrunA17_Chr1g0165421 | 29.433 | 829 | 425 | 18 | 26 | 709 | 276 | 1089 | 4.01e-104 | 344 |
| Msa0298620 | MtrunA17_Chr2g0307191 | 30.802 | 698 | 451 | 13 | 20 | 711 | 18 | 689 | 1.56e-103 | 332 |
| Msa0298620 | MtrunA17_Chr2g0297351 | 29.233 | 821 | 436 | 21 | 21 | 709 | 175 | 982 | 2.56e-102 | 337 |
| Msa0298620 | MtrunA17_Chr3g0077511 | 30.156 | 703 | 455 | 13 | 16 | 706 | 8 | 686 | 4.96e-102 | 328 |
| Msa0298620 | MtrunA17_Chr3g0095791 | 29.577 | 710 | 457 | 15 | 16 | 711 | 8 | 688 | 9.21e-102 | 327 |
| Msa0298620 | MtrunA17_Chr7g0269741 | 28.670 | 872 | 461 | 21 | 2 | 728 | 291 | 1146 | 6.35e-101 | 336 |
| Msa0298620 | MtrunA17_Chr8g0383701 | 41.266 | 395 | 203 | 9 | 1 | 368 | 266 | 658 | 8.97e-86 | 293 |
| Msa0298620 | MtrunA17_Chr8g0383701 | 28.982 | 383 | 238 | 8 | 372 | 737 | 714 | 1079 | 1.83e-40 | 160 |
| Msa0298620 | MtrunA17_Chr7g0274751 | 29.023 | 727 | 343 | 22 | 8 | 641 | 96 | 742 | 1.17e-84 | 285 |
| Msa0298620 | MtrunA17_Chr2g0296991 | 41.026 | 390 | 201 | 9 | 8 | 370 | 206 | 593 | 1.03e-81 | 281 |
| Msa0298620 | MtrunA17_Chr2g0296991 | 30.245 | 367 | 229 | 9 | 381 | 737 | 678 | 1027 | 2.76e-39 | 156 |
| Msa0298620 | MtrunA17_Chr3g0078671 | 38.916 | 406 | 218 | 10 | 1 | 378 | 215 | 618 | 1.12e-79 | 275 |
| Msa0298620 | MtrunA17_Chr3g0078671 | 30.028 | 363 | 239 | 7 | 381 | 737 | 679 | 1032 | 8.34e-40 | 158 |
| Msa0298620 | MtrunA17_Chr2g0307241 | 41.143 | 175 | 94 | 4 | 15 | 185 | 17 | 186 | 6.85e-34 | 129 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0298620 | AT2G32530.1 | 45.623 | 754 | 369 | 9 | 8 | 732 | 10 | 751 | 0.0 | 651 |
| Msa0298620 | AT2G32540.1 | 46.144 | 752 | 364 | 11 | 8 | 730 | 10 | 749 | 0.0 | 638 |
| Msa0298620 | AT4G15320.3 | 44.605 | 760 | 374 | 13 | 7 | 732 | 9 | 755 | 0.0 | 625 |
| Msa0298620 | AT4G15320.5 | 44.605 | 760 | 374 | 13 | 7 | 732 | 9 | 755 | 0.0 | 625 |
| Msa0298620 | AT4G15320.4 | 43.742 | 775 | 374 | 14 | 7 | 732 | 9 | 770 | 0.0 | 617 |
| Msa0298620 | AT2G32620.1 | 45.479 | 752 | 375 | 9 | 8 | 732 | 10 | 753 | 0.0 | 609 |
| Msa0298620 | AT2G32610.1 | 42.989 | 756 | 390 | 13 | 8 | 732 | 10 | 755 | 0.0 | 605 |
| Msa0298620 | AT4G15290.1 | 43.122 | 756 | 389 | 13 | 8 | 733 | 10 | 754 | 0.0 | 588 |
| Msa0298620 | AT2G32620.4 | 44.662 | 665 | 335 | 8 | 93 | 732 | 1 | 657 | 0.0 | 541 |
| Msa0298620 | AT4G15320.2 | 42.547 | 691 | 306 | 12 | 7 | 633 | 9 | 672 | 2.93e-180 | 535 |
| Msa0298620 | AT2G32620.3 | 46.734 | 597 | 295 | 7 | 8 | 589 | 10 | 598 | 3.65e-177 | 520 |
| Msa0298620 | AT4G15320.1 | 40.191 | 734 | 305 | 13 | 7 | 633 | 9 | 715 | 5.80e-173 | 517 |
| Msa0298620 | AT2G32620.2 | 48.369 | 521 | 247 | 6 | 8 | 513 | 10 | 523 | 1.12e-159 | 473 |
| Msa0298620 | AT4G18780.1 | 34.696 | 807 | 423 | 17 | 16 | 737 | 179 | 966 | 2.96e-135 | 424 |
| Msa0298620 | AT5G17420.1 | 34.611 | 809 | 443 | 20 | 1 | 737 | 215 | 1009 | 3.20e-135 | 425 |
| Msa0298620 | AT4G32410.1 | 34.058 | 828 | 439 | 21 | 1 | 737 | 252 | 1063 | 5.76e-134 | 423 |
| Msa0298620 | AT5G05170.1 | 33.534 | 829 | 447 | 20 | 1 | 739 | 236 | 1050 | 1.16e-133 | 422 |
| Msa0298620 | AT5G09870.1 | 32.524 | 824 | 457 | 16 | 1 | 737 | 241 | 1052 | 3.35e-133 | 421 |
| Msa0298620 | AT2G25540.1 | 34.220 | 827 | 439 | 22 | 1 | 737 | 232 | 1043 | 5.52e-132 | 417 |
| Msa0298620 | AT1G55850.1 | 35.419 | 751 | 406 | 21 | 8 | 727 | 18 | 720 | 2.56e-131 | 406 |
| Msa0298620 | AT5G64740.1 | 32.169 | 830 | 455 | 16 | 1 | 737 | 253 | 1067 | 1.67e-129 | 411 |
| Msa0298620 | AT2G21770.1 | 32.807 | 823 | 456 | 20 | 1 | 737 | 259 | 1070 | 3.28e-127 | 405 |
| Msa0298620 | AT4G24000.1 | 32.168 | 715 | 438 | 13 | 27 | 729 | 34 | 713 | 8.18e-112 | 355 |
| Msa0298620 | AT4G23990.1 | 31.457 | 693 | 421 | 12 | 57 | 730 | 86 | 743 | 4.16e-111 | 354 |
| Msa0298620 | AT4G24010.1 | 33.283 | 658 | 382 | 14 | 57 | 696 | 67 | 685 | 1.09e-109 | 351 |
| Msa0298620 | AT1G32180.1 | 29.769 | 823 | 437 | 17 | 25 | 710 | 123 | 941 | 3.19e-106 | 347 |
| Msa0298620 | AT1G32180.2 | 29.769 | 823 | 437 | 17 | 25 | 710 | 123 | 941 | 3.19e-106 | 347 |
| Msa0298620 | AT4G38190.1 | 28.837 | 808 | 435 | 17 | 26 | 709 | 273 | 1064 | 2.33e-104 | 345 |
| Msa0298620 | AT2G33100.2 | 29.370 | 841 | 444 | 20 | 8 | 709 | 167 | 996 | 9.42e-104 | 342 |
| Msa0298620 | AT2G33100.1 | 29.370 | 841 | 444 | 20 | 8 | 709 | 167 | 996 | 9.42e-104 | 342 |
| Msa0298620 | AT1G02730.1 | 28.864 | 880 | 456 | 21 | 2 | 728 | 296 | 1158 | 2.00e-102 | 340 |
| Msa0298620 | AT3G03050.1 | 29.132 | 841 | 442 | 17 | 8 | 709 | 278 | 1103 | 2.37e-100 | 334 |
| Msa0298620 | AT5G16910.1 | 29.498 | 817 | 431 | 17 | 23 | 709 | 302 | 1103 | 8.42e-99 | 330 |
| Msa0298620 | AT4G39350.1 | 41.162 | 396 | 202 | 10 | 1 | 368 | 254 | 646 | 1.01e-84 | 290 |
| Msa0298620 | AT4G39350.1 | 28.169 | 355 | 242 | 5 | 386 | 737 | 722 | 1066 | 2.11e-35 | 145 |
| Msa0298620 | AT5G44030.1 | 40.256 | 390 | 204 | 9 | 8 | 370 | 199 | 586 | 4.28e-81 | 280 |
| Msa0298620 | AT5G44030.1 | 29.477 | 363 | 239 | 6 | 381 | 737 | 681 | 1032 | 1.36e-38 | 154 |
| Msa0298620 | AT5G44030.2 | 40.256 | 390 | 204 | 9 | 8 | 370 | 228 | 615 | 7.51e-81 | 280 |
| Msa0298620 | AT5G44030.2 | 29.477 | 363 | 239 | 6 | 381 | 737 | 710 | 1061 | 1.24e-38 | 155 |
| Msa0298620 | AT4G24000.2 | 31.532 | 555 | 328 | 13 | 192 | 729 | 2 | 521 | 1.06e-74 | 251 |
| Msa0298620 | AT5G44030.3 | 43.813 | 299 | 153 | 5 | 86 | 370 | 10 | 307 | 1.43e-72 | 251 |
| Msa0298620 | AT5G44030.3 | 30.056 | 356 | 232 | 6 | 388 | 737 | 409 | 753 | 5.74e-39 | 155 |
| Msa0298620 | AT4G23990.2 | 29.840 | 563 | 336 | 13 | 192 | 730 | 2 | 529 | 1.74e-71 | 243 |
Find 156 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTTGGTAAAATCCAATTT+AGG | 0.109508 | 2_3:-52756425 | Msa0298620:CDS |
| AGCACTTGTTATTAAGATTT+TGG | 0.119897 | 2_3:-52755544 | Msa0298620:CDS |
| AACCCAAAACTTAGCAAATT+TGG | 0.129090 | 2_3:+52758578 | None:intergenic |
| ATATTACTCCTGAGATTTAA+TGG | 0.179687 | 2_3:-52755319 | Msa0298620:three_prime_UTR |
| CTACAAGAGTATAAAGTAAA+AGG | 0.191998 | 2_3:-52755813 | Msa0298620:CDS |
| CTTCCAAATTTGCTAAGTTT+TGG | 0.203327 | 2_3:-52758581 | Msa0298620:CDS |
| GATTGCTTCCTCTATAAAAT+TGG | 0.205458 | 2_3:+52756823 | None:intergenic |
| TTGTAATTGTGTTCATAATT+TGG | 0.215230 | 2_3:+52757844 | None:intergenic |
| TCAACAAGTGTATGGTTTAT+AGG | 0.235726 | 2_3:-52755741 | Msa0298620:CDS |
| CACAGAAGATATGCTATTTA+CGG | 0.237161 | 2_3:-52757342 | Msa0298620:CDS |
| CCTGTTATGGGTACCCTCTT+TGG | 0.238815 | 2_3:-52756441 | Msa0298620:CDS |
| CTTCAGATGGGCTGGTTATA+TGG | 0.244829 | 2_3:-52756645 | Msa0298620:intron |
| AACCATTCTTGTTTGAATTC+TGG | 0.245579 | 2_3:+52758477 | None:intergenic |
| AAGACAAGCCAGCCCTAAAT+TGG | 0.251195 | 2_3:+52756412 | None:intergenic |
| AGTCCAACTTCTGGTGTTAT+TGG | 0.253634 | 2_3:-52755651 | Msa0298620:CDS |
| TTGGAATGAAGCTGAATTTC+GGG | 0.257400 | 2_3:+52758258 | None:intergenic |
| CAGGAGTAATATCAACTTAT+AGG | 0.258509 | 2_3:+52755330 | None:intergenic |
| CTTATTGTTGGCTTACCAAT+TGG | 0.259289 | 2_3:-52756392 | Msa0298620:CDS |
| CCCGAGCCAACCGCGTTTAC+AGG | 0.262333 | 2_3:-52756552 | Msa0298620:CDS |
| TAGCAAGCATTCTCCTGTTA+TGG | 0.266654 | 2_3:-52756454 | Msa0298620:CDS |
| AGTGCCATGCTTAAGCTCTT+AGG | 0.270075 | 2_3:-52755711 | Msa0298620:CDS |
| CTTTGGTAAAATCCAATTTA+GGG | 0.273325 | 2_3:-52756424 | Msa0298620:CDS |
| TTGCTTTCTCATGTGAATCT+TGG | 0.274164 | 2_3:-52759415 | Msa0298620:CDS |
| TATCCTAATCAAATACAATA+TGG | 0.281501 | 2_3:-52757315 | Msa0298620:CDS |
| TTTCCATATTGTATTTGATT+AGG | 0.299333 | 2_3:+52757312 | None:intergenic |
| CTGCAAATTCTCCCTCAAAT+TGG | 0.301372 | 2_3:+52758239 | None:intergenic |
| TTGTTTGCTAGGGGTAAATA+TGG | 0.302310 | 2_3:-52755423 | Msa0298620:CDS |
| TATGCGTTGACAGGTTATAT+TGG | 0.311069 | 2_3:-52757920 | Msa0298620:intron |
| TTCTGGTGAATCATCACTTT+TGG | 0.313648 | 2_3:+52758494 | None:intergenic |
| TGTATCTAGTAGTTTGTTAC+TGG | 0.314730 | 2_3:-52755461 | Msa0298620:CDS |
| GCTTGTTATGTTTCTGATGA+TGG | 0.315570 | 2_3:-52758639 | Msa0298620:CDS |
| GGAATAAAAGACGACCCTTT+TGG | 0.316228 | 2_3:-52757541 | Msa0298620:CDS |
| AGCAAGCATTCTCCTGTTAT+GGG | 0.321276 | 2_3:-52756453 | Msa0298620:CDS |
| CAGTCTACGTTCAACATAAA+AGG | 0.336254 | 2_3:+52757676 | None:intergenic |
| GAATCATCCAAGTATAATTA+AGG | 0.336801 | 2_3:-52758194 | Msa0298620:intron |
| TATAGCATGTTGCATAATCT+TGG | 0.337211 | 2_3:+52757633 | None:intergenic |
| ATTGGAATGAAGCTGAATTT+CGG | 0.338929 | 2_3:+52758257 | None:intergenic |
| TTATTGTTGGCTTACCAATT+GGG | 0.340053 | 2_3:-52756391 | Msa0298620:CDS |
| GGGCTGGCTTGTCTTATTGT+TGG | 0.343431 | 2_3:-52756404 | Msa0298620:CDS |
| CAAATACAATATGGAAATAA+AGG | 0.347147 | 2_3:-52757306 | Msa0298620:intron |
| GCCTGTAAACGCGGTTGGCT+CGG | 0.353153 | 2_3:+52756551 | None:intergenic |
| ATAATTTGGTCTCTTCTCTC+TGG | 0.366584 | 2_3:+52757858 | None:intergenic |
| CATATTCACAATCAGATACT+TGG | 0.373087 | 2_3:+52756801 | None:intergenic |
| TCAGCAACACAAGTTATAGA+AGG | 0.377465 | 2_3:-52756878 | Msa0298620:CDS |
| ACTTGGGAGAAATATCTAAA+AGG | 0.378307 | 2_3:+52758519 | None:intergenic |
| TACCAATTGGGGTCTGCGTT+CGG | 0.380901 | 2_3:-52756379 | Msa0298620:CDS |
| TTCTGAAAGGGTTGTTTGCT+AGG | 0.385850 | 2_3:-52755434 | Msa0298620:CDS |
| AGTGGGAAAGAGTGTGGAAT+AGG | 0.391608 | 2_3:-52755501 | Msa0298620:CDS |
| TTGTTGTATTAGTACATTCT+CGG | 0.396375 | 2_3:+52756928 | None:intergenic |
| ACTGTCTTATTCCAGGGAGC+TGG | 0.397150 | 2_3:-52755882 | Msa0298620:intron |
| CCAAAGAGGGTACCCATAAC+AGG | 0.401351 | 2_3:+52756441 | None:intergenic |
| AATGTACTAATACAACAATT+TGG | 0.401655 | 2_3:-52756923 | Msa0298620:CDS |
| TTTATTACCTTAATTATACT+TGG | 0.407006 | 2_3:+52758187 | None:intergenic |
| TAGCACTTGTTGGGGTAAAC+AGG | 0.409962 | 2_3:-52756774 | Msa0298620:intron |
| TCAATGGGTGGCTGCATTTG+AGG | 0.415447 | 2_3:-52757515 | Msa0298620:intron |
| TATTCCAGGGAGCTGGGCTA+TGG | 0.415813 | 2_3:-52755875 | Msa0298620:intron |
| CCTGTAAACGCGGTTGGCTC+GGG | 0.421920 | 2_3:+52756552 | None:intergenic |
| ATATGAATATAGCACTTGTT+GGG | 0.423823 | 2_3:-52756783 | Msa0298620:CDS |
| TGAATATGCAAAGGAAAGGT+TGG | 0.428367 | 2_3:-52756593 | Msa0298620:CDS |
| GACCGAACGCAGACCCCAAT+TGG | 0.428493 | 2_3:+52756377 | None:intergenic |
| CAACAAAAGAGATGGTCTTC+AGG | 0.429438 | 2_3:-52756495 | Msa0298620:CDS |
| GTGCCATGCTTAAGCTCTTA+GGG | 0.430274 | 2_3:-52755710 | Msa0298620:CDS |
| GCAAACAACCCTTTCAGAAA+TGG | 0.433149 | 2_3:+52755438 | None:intergenic |
| TTCAGCTTCATTCCAATTTG+AGG | 0.436875 | 2_3:-52758251 | Msa0298620:CDS |
| ACATGCTATATGCATATTGA+TGG | 0.437104 | 2_3:-52757620 | Msa0298620:CDS |
| TGACTTGAAAATGGTAGATA+AGG | 0.439979 | 2_3:+52755395 | None:intergenic |
| TACCGTTGAAGGAGACGGTT+TGG | 0.441157 | 2_3:+52759329 | None:intergenic |
| GGACTTCAAGGACCATACTA+TGG | 0.444865 | 2_3:-52757381 | Msa0298620:CDS |
| GTTACTGGCCATTTCTGAAA+GGG | 0.448294 | 2_3:-52755446 | Msa0298620:CDS |
| GGGAGTGATTATTCTACTAA+TGG | 0.449793 | 2_3:-52756857 | Msa0298620:CDS |
| TTTATATTACATACCGTTGA+AGG | 0.450188 | 2_3:+52759318 | None:intergenic |
| CACCAGAATTCAAACAAGAA+TGG | 0.451883 | 2_3:-52758479 | Msa0298620:CDS |
| GTGTTTGATCCTCCATAGTA+TGG | 0.454323 | 2_3:+52757369 | None:intergenic |
| CAATAAGATCAACAAGTGTA+TGG | 0.456139 | 2_3:-52755749 | Msa0298620:CDS |
| TCAGCTTCATTCCAATTTGA+GGG | 0.456850 | 2_3:-52758250 | Msa0298620:CDS |
| GTTGTGCCAACCACAAAAGC+TGG | 0.457175 | 2_3:+52755588 | None:intergenic |
| ATAGAAATCCATTAAATCTC+AGG | 0.459476 | 2_3:+52755311 | None:intergenic |
| ATAGCATGTTGCATAATCTT+GGG | 0.464154 | 2_3:+52757634 | None:intergenic |
| TTATTCTTCTCAATACCAAA+TGG | 0.468145 | 2_3:-52759376 | Msa0298620:CDS |
| CATTGTAGTAAGTAATCCTC+CGG | 0.471086 | 2_3:+52756521 | None:intergenic |
| GCCACCCATTGATTTCCAAA+AGG | 0.473772 | 2_3:+52757526 | None:intergenic |
| ACAAGAATGGTTACAAATGA+AGG | 0.473858 | 2_3:-52758466 | Msa0298620:intron |
| TGTCAACTGCACAAGCAAAA+TGG | 0.478341 | 2_3:+52755566 | None:intergenic |
| GGTAAAATCCAATTTAGGGC+TGG | 0.479956 | 2_3:-52756420 | Msa0298620:CDS |
| TGTTTGCTAGGGGTAAATAT+GGG | 0.481543 | 2_3:-52755422 | Msa0298620:CDS |
| GTTAACAGCAGGACTCCATT+TGG | 0.481702 | 2_3:+52759361 | None:intergenic |
| ATGATTGGTGGTTCTAGAAC+AGG | 0.483104 | 2_3:+52758717 | None:intergenic |
| CCACCCATTGATTTCCAAAA+GGG | 0.486982 | 2_3:+52757527 | None:intergenic |
| TCTGAAAGGGTTGTTTGCTA+GGG | 0.487780 | 2_3:-52755433 | Msa0298620:CDS |
| CAAAAGGAAAGTCCAACTTC+TGG | 0.490074 | 2_3:-52755660 | Msa0298620:CDS |
| AATTTGCAGACAAGAGTCTC+TGG | 0.491545 | 2_3:-52757715 | Msa0298620:intron |
| TAACAAGCTAGCTTATTAGC+TGG | 0.493726 | 2_3:+52758654 | None:intergenic |
| TACCAACACATTCATAGCTC+CGG | 0.494183 | 2_3:+52757819 | None:intergenic |
| TACAAGAGTATAAAGTAAAA+GGG | 0.495125 | 2_3:-52755812 | Msa0298620:CDS |
| ATATTGGATGGTCATTCTGA+TGG | 0.497574 | 2_3:-52757904 | Msa0298620:CDS |
| AATATGAATATAGCACTTGT+TGG | 0.497803 | 2_3:-52756784 | Msa0298620:CDS |
| AGTCTTTGAAGTAACACAAA+AGG | 0.498554 | 2_3:-52755676 | Msa0298620:CDS |
| GGTAACAAAGAAGAGAGAAT+AGG | 0.498755 | 2_3:+52759471 | None:intergenic |
| ATATCAGAAGATGTACCAAC+TGG | 0.500267 | 2_3:-52756618 | Msa0298620:CDS |
| GCGTTTACAGGCTGTGCTCC+CGG | 0.502923 | 2_3:-52756540 | Msa0298620:CDS |
| GACTTGAAAATGGTAGATAA+GGG | 0.503820 | 2_3:+52755396 | None:intergenic |
| CGTTGACAGGTTATATTGGA+TGG | 0.505316 | 2_3:-52757916 | Msa0298620:intron |
| CTGTCTTATTCCAGGGAGCT+GGG | 0.505938 | 2_3:-52755881 | Msa0298620:intron |
| TATTGTTGGCTTACCAATTG+GGG | 0.508021 | 2_3:-52756390 | Msa0298620:CDS |
| GTTGGCCATTCTGCATATGA+TGG | 0.512535 | 2_3:+52759574 | None:intergenic |
| ATATTATACTTCTTACAGAA+AGG | 0.520036 | 2_3:+52758555 | None:intergenic |
| TTGTGAAGGTGTTGTTGATA+CGG | 0.520835 | 2_3:+52759450 | None:intergenic |
| TGATTATGCAATATGCAACT+AGG | 0.523140 | 2_3:+52756334 | None:intergenic |
| CGTAAATAGCATATCTTCTG+TGG | 0.523357 | 2_3:+52757343 | None:intergenic |
| AATCTTGGTTCACATACACT+TGG | 0.525534 | 2_3:-52759400 | Msa0298620:CDS |
| GCTTCCTCTATAAAATTGGA+AGG | 0.528133 | 2_3:+52756827 | None:intergenic |
| ACAACAATTTGGAAGTTCAA+AGG | 0.535086 | 2_3:-52756912 | Msa0298620:CDS |
| CTTTGCATATTCAATCCAGT+TGG | 0.535136 | 2_3:+52756603 | None:intergenic |
| GATTATGCAATATGCAACTA+GGG | 0.540386 | 2_3:+52756335 | None:intergenic |
| GTTCAACATAAAAGGAGCAT+TGG | 0.542027 | 2_3:+52757684 | None:intergenic |
| ACAACACCTTCACAATTCCA+TGG | 0.549695 | 2_3:-52759442 | Msa0298620:CDS |
| TGTTACTGGCCATTTCTGAA+AGG | 0.550252 | 2_3:-52755447 | Msa0298620:CDS |
| TCTCCAATAACACCAGAAGT+TGG | 0.551519 | 2_3:+52755648 | None:intergenic |
| TGCAATTAGAAGCTCATAGT+GGG | 0.552228 | 2_3:-52755518 | Msa0298620:CDS |
| ACAGTGTTCAATGTGATGAT+TGG | 0.552842 | 2_3:+52758702 | None:intergenic |
| TATGAACACAATTACAAAGC+CGG | 0.562840 | 2_3:-52757838 | Msa0298620:CDS |
| AACAAAGAAGAGAGAATAGG+AGG | 0.565555 | 2_3:+52759474 | None:intergenic |
| TGCTAAAGAAGACAACTGTA+AGG | 0.565575 | 2_3:+52756472 | None:intergenic |
| GTGCAATTAGAAGCTCATAG+TGG | 0.566989 | 2_3:-52755519 | Msa0298620:CDS |
| ATCCAAACCGTCTCCTTCAA+CGG | 0.575866 | 2_3:-52759331 | Msa0298620:intron |
| CTGAAAGGGTTGTTTGCTAG+GGG | 0.575876 | 2_3:-52755432 | Msa0298620:CDS |
| AGATTAGCGATGAAATACTA+AGG | 0.576860 | 2_3:+52755238 | None:intergenic |
| AATTTCCATCATATGCAGAA+TGG | 0.578301 | 2_3:-52759579 | Msa0298620:exon |
| CATGAGAAAGCAAGAAACCA+TGG | 0.578989 | 2_3:+52759425 | None:intergenic |
| TTGTGCCAACCACAAAAGCT+GGG | 0.580530 | 2_3:+52755589 | None:intergenic |
| GTGTTCAATGTGATGATTGG+TGG | 0.582750 | 2_3:+52758705 | None:intergenic |
| TTGGTGGAACAATCAGAGAA+TGG | 0.583369 | 2_3:-52755775 | Msa0298620:CDS |
| CAGCAACACAAGTTATAGAA+GGG | 0.583862 | 2_3:-52756877 | Msa0298620:CDS |
| GCACAGCCTGTAAACGCGGT+TGG | 0.586028 | 2_3:+52756546 | None:intergenic |
| AATAGCATATCTTCTGTGGA+AGG | 0.597992 | 2_3:+52757347 | None:intergenic |
| TTACATACCGTTGAAGGAGA+CGG | 0.598803 | 2_3:+52759324 | None:intergenic |
| ATTGGAGATGATGCAAATGC+TGG | 0.605052 | 2_3:-52755633 | Msa0298620:CDS |
| AGTACAGGAGCTTCCATGTG+TGG | 0.605203 | 2_3:-52758763 | Msa0298620:CDS |
| ATATTGATGGATTCTAAGAA+CGG | 0.611972 | 2_3:-52757607 | Msa0298620:CDS |
| CAATGATCCAACAAAAGAGA+TGG | 0.612047 | 2_3:-52756503 | Msa0298620:CDS |
| AGCCGGAGCTATGAATGTGT+TGG | 0.613715 | 2_3:-52757821 | Msa0298620:intron |
| CAACTGGATTGAATATGCAA+AGG | 0.619420 | 2_3:-52756602 | Msa0298620:CDS |
| AAGAAACCATGGAATTGTGA+AGG | 0.621466 | 2_3:+52759436 | None:intergenic |
| TATGAATATAGCACTTGTTG+GGG | 0.627581 | 2_3:-52756782 | Msa0298620:CDS |
| CTGGATATGTAGATTAAGTG+AGG | 0.630306 | 2_3:+52757877 | None:intergenic |
| ATTGTAGTAAGTAATCCTCC+GGG | 0.635850 | 2_3:+52756522 | None:intergenic |
| GGATTGAATATGCAAAGGAA+AGG | 0.635952 | 2_3:-52756597 | Msa0298620:CDS |
| GCTCATAGTGGGAAAGAGTG+TGG | 0.637563 | 2_3:-52755507 | Msa0298620:CDS |
| TATCCCTAAGAGCTTAAGCA+TGG | 0.651527 | 2_3:+52755707 | None:intergenic |
| GGGAGCACAGCCTGTAAACG+CGG | 0.667882 | 2_3:+52756542 | None:intergenic |
| CTTCAAGGACCATACTATGG+AGG | 0.676748 | 2_3:-52757378 | Msa0298620:CDS |
| TTTACAGGCTGTGCTCCCGG+AGG | 0.680678 | 2_3:-52756537 | Msa0298620:CDS |
| GTCACAAACAAATCCACACA+TGG | 0.687294 | 2_3:+52758750 | None:intergenic |
| TGTGCCAACCACAAAAGCTG+GGG | 0.694857 | 2_3:+52755590 | None:intergenic |
| GAGATGATGCAAATGCTGGT+AGG | 0.699231 | 2_3:-52755629 | Msa0298620:CDS |
| GTTGAACGTAGACTGTGACA+TGG | 0.762585 | 2_3:-52757668 | Msa0298620:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTAGACAACTTTTTAA+GGG | + | chr2_3:52755940-52755959 | None:intergenic | 15.0% |
| !! | TTTATTACCTTAATTATACT+TGG | + | chr2_3:52756616-52756635 | None:intergenic | 15.0% |
| !!! | TTTTGGAAATAATATAACAA+CGG | - | chr2_3:52758768-52758787 | Msa0298620:intron | 15.0% |
| !! | AGTTGAAAACTTGAAAATTA+TGG | - | chr2_3:52755853-52755872 | Msa0298620:CDS | 20.0% |
| !!! | AATTTAGACAACTTTTTAAG+GGG | + | chr2_3:52755939-52755958 | None:intergenic | 20.0% |
| !!! | CAAATTTAGACAACTTTTTA+AGG | + | chr2_3:52755941-52755960 | None:intergenic | 20.0% |
| !! | CTTAAAAAGTTGTCTAAATT+TGG | - | chr2_3:52755939-52755958 | Msa0298620:intron | 20.0% |
| !! | AAACTAATTAGCAAGATAAA+TGG | + | chr2_3:52755974-52755993 | None:intergenic | 20.0% |
| !! | ATATTATACTTCTTACAGAA+AGG | + | chr2_3:52756248-52756267 | None:intergenic | 20.0% |
| !! | TATTCTCAAATACAGAAAAA+AGG | - | chr2_3:52756584-52756603 | Msa0298620:CDS | 20.0% |
| !! | ATTTGTTCAATTATAGAACA+AGG | + | chr2_3:52756683-52756702 | None:intergenic | 20.0% |
| !!! | ATAATTGAACAAATTTTAGC+AGG | - | chr2_3:52756689-52756708 | Msa0298620:intron | 20.0% |
| !! | TTGTAATTGTGTTCATAATT+TGG | + | chr2_3:52756959-52756978 | None:intergenic | 20.0% |
| !!! | TTATTCCATCGTAAAATTTT+TGG | + | chr2_3:52757246-52757265 | None:intergenic | 20.0% |
| !! | TACAAACACAAATTTATAAG+TGG | + | chr2_3:52757352-52757371 | None:intergenic | 20.0% |
| !! | TATCCTAATCAAATACAATA+TGG | - | chr2_3:52757485-52757504 | Msa0298620:intron | 20.0% |
| !! | TTTCCATATTGTATTTGATT+AGG | + | chr2_3:52757491-52757510 | None:intergenic | 20.0% |
| !! | CAAATACAATATGGAAATAA+AGG | - | chr2_3:52757494-52757513 | Msa0298620:intron | 20.0% |
| !!! | TATTTTATCAGAATGTGATA+TGG | - | chr2_3:52757560-52757579 | Msa0298620:CDS | 20.0% |
| !! | AATGTACTAATACAACAATT+TGG | - | chr2_3:52757877-52757896 | Msa0298620:CDS | 20.0% |
| !!! | TTGTGTAATTTTATAGTCTA+AGG | + | chr2_3:52758094-52758113 | None:intergenic | 20.0% |
| !! | CATTTAATCATAAAATCAGT+TGG | - | chr2_3:52758606-52758625 | Msa0298620:CDS | 20.0% |
| !! | CAAAAACTGTTAAAATTAGT+CGG | + | chr2_3:52758753-52758772 | None:intergenic | 20.0% |
| !!! | TACAAGAGTATAAAGTAAAA+GGG | - | chr2_3:52758988-52759007 | Msa0298620:intron | 20.0% |
| !! | TTAAATTCTTTAGTTACCTA+AGG | + | chr2_3:52759532-52759551 | None:intergenic | 20.0% |
| !!! | TCCATATTTTTTCATACAGA+GGG | + | chr2_3:52755263-52755282 | None:intergenic | 25.0% |
| !!! | ATCCATATTTTTTCATACAG+AGG | + | chr2_3:52755264-52755283 | None:intergenic | 25.0% |
| ! | TTATTCTTCTCAATACCAAA+TGG | - | chr2_3:52755424-52755443 | Msa0298620:CDS | 25.0% |
| ! | TTTATATTACATACCGTTGA+AGG | + | chr2_3:52755485-52755504 | None:intergenic | 25.0% |
| ! | GGTATATCTATTATCATCTA+CGG | + | chr2_3:52755754-52755773 | None:intergenic | 25.0% |
| ! | GTTAATGCAGATTAAAGATA+AGG | + | chr2_3:52755917-52755936 | None:intergenic | 25.0% |
| !!! | TGTTCTGTTTTTACTTTCTA+TGG | - | chr2_3:52756185-52756204 | Msa0298620:intron | 25.0% |
| !! | TTTTACTTTCTATGGTCTTT+TGG | - | chr2_3:52756193-52756212 | Msa0298620:intron | 25.0% |
| !!! | TTCCAAATTTGCTAAGTTTT+GGG | - | chr2_3:52756220-52756239 | Msa0298620:intron | 25.0% |
| ! | GAGATAAGTATCTAAATCTA+TGG | - | chr2_3:52756399-52756418 | Msa0298620:CDS | 25.0% |
| ! | ATAAGTATCTAAATCTATGG+TGG | - | chr2_3:52756402-52756421 | Msa0298620:CDS | 25.0% |
| ! | GAATCATCCAAGTATAATTA+AGG | - | chr2_3:52756606-52756625 | Msa0298620:CDS | 25.0% |
| ! | AGAAATACTTGGAAGAATTT+AGG | + | chr2_3:52756743-52756762 | None:intergenic | 25.0% |
| ! | TAAATTCTTCCAAGTATTTC+TGG | - | chr2_3:52756742-52756761 | Msa0298620:intron | 25.0% |
| ! | CTCATTCTTATCTTTCTTAA+CGG | - | chr2_3:52757061-52757080 | Msa0298620:intron | 25.0% |
| ! | TCATTCTTATCTTTCTTAAC+GGG | - | chr2_3:52757062-52757081 | Msa0298620:intron | 25.0% |
| !!! | ATATTGATGGATTCTAAGAA+CGG | - | chr2_3:52757193-52757212 | Msa0298620:intron | 25.0% |
| !! | TGTTTCCAAAAATTTTACGA+TGG | - | chr2_3:52757238-52757257 | Msa0298620:intron | 25.0% |
| ! | TATGCTTGAGTAATTATATG+AGG | - | chr2_3:52757760-52757779 | Msa0298620:intron | 25.0% |
| ! | TTGTTGTATTAGTACATTCT+CGG | + | chr2_3:52757875-52757894 | None:intergenic | 25.0% |
| ! | AATATGAATATAGCACTTGT+TGG | - | chr2_3:52758016-52758035 | Msa0298620:intron | 25.0% |
| ! | ATATGAATATAGCACTTGTT+GGG | - | chr2_3:52758017-52758036 | Msa0298620:intron | 25.0% |
| !!! | TTATCTTTTGAAACTTCAGA+TGG | - | chr2_3:52758142-52758161 | Msa0298620:intron | 25.0% |
| !!! | TATCTTTTGAAACTTCAGAT+GGG | - | chr2_3:52758143-52758162 | Msa0298620:intron | 25.0% |
| !! | AAATTGGATTTTACCAAAGA+GGG | + | chr2_3:52758375-52758394 | None:intergenic | 25.0% |
| !! | TAAATTGGATTTTACCAAAG+AGG | + | chr2_3:52758376-52758395 | None:intergenic | 25.0% |
| ! | TCTTTGGTAAAATCCAATTT+AGG | - | chr2_3:52758375-52758394 | Msa0298620:intron | 25.0% |
| ! | CTTTGGTAAAATCCAATTTA+GGG | - | chr2_3:52758376-52758395 | Msa0298620:intron | 25.0% |
| !! | CTCAATGTTTAATTTAACCT+TGG | + | chr2_3:52758543-52758562 | None:intergenic | 25.0% |
| !!! | CGACTAATTTTAACAGTTTT+TGG | - | chr2_3:52758751-52758770 | Msa0298620:CDS | 25.0% |
| ! | GAAATAATATAACAACGGTT+AGG | - | chr2_3:52758773-52758792 | Msa0298620:intron | 25.0% |
| !! | CTACAAGAGTATAAAGTAAA+AGG | - | chr2_3:52758987-52759006 | Msa0298620:intron | 25.0% |
| !! | AAGGGTTTTCATTAAGATAT+TGG | - | chr2_3:52759006-52759025 | Msa0298620:intron | 25.0% |
| !!! | AGCACTTGTTATTAAGATTT+TGG | - | chr2_3:52759256-52759275 | Msa0298620:intron | 25.0% |
| !!! | GCACTTGTTATTAAGATTTT+GGG | - | chr2_3:52759257-52759276 | Msa0298620:intron | 25.0% |
| !!! | CACTTGTTATTAAGATTTTG+GGG | - | chr2_3:52759258-52759277 | Msa0298620:intron | 25.0% |
| !!! | ACTTGTTATTAAGATTTTGG+GGG | - | chr2_3:52759259-52759278 | Msa0298620:intron | 25.0% |
| ! | ATATTACTCCTGAGATTTAA+TGG | - | chr2_3:52759481-52759500 | Msa0298620:CDS | 25.0% |
| ! | ATAGAAATCCATTAAATCTC+AGG | + | chr2_3:52759492-52759511 | None:intergenic | 25.0% |
| AATTTCCATCATATGCAGAA+TGG | - | chr2_3:52755221-52755240 | Msa0298620:three_prime_UTR | 30.0% | |
| TCCCTCTGTATGAAAAAATA+TGG | - | chr2_3:52755259-52755278 | Msa0298620:intron | 30.0% | |
| TGTGACTCAATCAATAGTTA+TGG | - | chr2_3:52755566-52755585 | Msa0298620:CDS | 30.0% | |
| ATGGTTAACAATGTCCAAAT+TGG | - | chr2_3:52755872-52755891 | Msa0298620:intron | 30.0% | |
| AAACTCATTAACCACCAATT+TGG | + | chr2_3:52755889-52755908 | None:intergenic | 30.0% | |
| ! | TTTTTATCCTCATAGAGTAC+AGG | - | chr2_3:52756022-52756041 | Msa0298620:intron | 30.0% |
| !!! | CTTCCAAATTTGCTAAGTTT+TGG | - | chr2_3:52756219-52756238 | Msa0298620:intron | 30.0% |
| AACCCAAAACTTAGCAAATT+TGG | + | chr2_3:52756225-52756244 | None:intergenic | 30.0% | |
| ACTTGGGAGAAATATCTAAA+AGG | + | chr2_3:52756284-52756303 | None:intergenic | 30.0% | |
| !! | ATCATCACTTTTGGTAACTT+GGG | + | chr2_3:52756300-52756319 | None:intergenic | 30.0% |
| !! | AATCATCACTTTTGGTAACT+TGG | + | chr2_3:52756301-52756320 | None:intergenic | 30.0% |
| ! | AACCATTCTTGTTTGAATTC+TGG | + | chr2_3:52756326-52756345 | None:intergenic | 30.0% |
| ACAAGAATGGTTACAAATGA+AGG | - | chr2_3:52756334-52756353 | Msa0298620:CDS | 30.0% | |
| TGCACAAGTAACAAATTTGT+AGG | - | chr2_3:52756434-52756453 | Msa0298620:CDS | 30.0% | |
| CAAGTAACAAATTTGTAGGA+TGG | - | chr2_3:52756438-52756457 | Msa0298620:CDS | 30.0% | |
| !!! | TCATCTTTGTGTTTTTTTGC+AGG | - | chr2_3:52756480-52756499 | Msa0298620:CDS | 30.0% |
| TGACAATCTTAGCCAAAAAA+TGG | - | chr2_3:52756510-52756529 | Msa0298620:CDS | 30.0% | |
| ATTGGAATGAAGCTGAATTT+CGG | + | chr2_3:52756546-52756565 | None:intergenic | 30.0% | |
| TATGAACACAATTACAAAGC+CGG | - | chr2_3:52756962-52756981 | Msa0298620:intron | 30.0% | |
| TTCGCAGAGCTAAATAATAT+TGG | + | chr2_3:52757017-52757036 | None:intergenic | 30.0% | |
| AGAAAGATAAGAATGAGTCT+CGG | + | chr2_3:52757058-52757077 | None:intergenic | 30.0% | |
| ATAGCATGTTGCATAATCTT+GGG | + | chr2_3:52757169-52757188 | None:intergenic | 30.0% | |
| TATAGCATGTTGCATAATCT+TGG | + | chr2_3:52757170-52757189 | None:intergenic | 30.0% | |
| ACATGCTATATGCATATTGA+TGG | - | chr2_3:52757180-52757199 | Msa0298620:intron | 30.0% | |
| !!! | TGTTTTTTGCAGTACATGAT+AGG | - | chr2_3:52757386-52757405 | Msa0298620:CDS | 30.0% |
| !!! | GTTTTTTGCAGTACATGATA+GGG | - | chr2_3:52757387-52757406 | Msa0298620:CDS | 30.0% |
| !!! | TTTTTTGCAGTACATGATAG+GGG | - | chr2_3:52757388-52757407 | Msa0298620:CDS | 30.0% |
| ! | CACAGAAGATATGCTATTTA+CGG | - | chr2_3:52757458-52757477 | Msa0298620:intron | 30.0% |
| !! | TTGTTAACTGGTTCTAGTTA+AGG | + | chr2_3:52757710-52757729 | None:intergenic | 30.0% |
| ! | ATTGAGCTTAAGTTGTTAAC+TGG | + | chr2_3:52757722-52757741 | None:intergenic | 30.0% |
| !!! | CGAGTTTTTTAGTATCATAC+AGG | + | chr2_3:52757823-52757842 | None:intergenic | 30.0% |
| !! | CGCTATTTTGTATCTTTACT+AGG | - | chr2_3:52757841-52757860 | Msa0298620:CDS | 30.0% |
| ACAACAATTTGGAAGTTCAA+AGG | - | chr2_3:52757888-52757907 | Msa0298620:CDS | 30.0% | |
| ! | TAGTCCTTCCAATTTTATAG+AGG | - | chr2_3:52757969-52757988 | Msa0298620:intron | 30.0% |
| GATTGCTTCCTCTATAAAAT+TGG | + | chr2_3:52757980-52757999 | None:intergenic | 30.0% | |
| CATATTCACAATCAGATACT+TGG | + | chr2_3:52758002-52758021 | None:intergenic | 30.0% | |
| ! | TATGAATATAGCACTTGTTG+GGG | - | chr2_3:52758018-52758037 | Msa0298620:intron | 30.0% |
| !! | TTATTGTTGGCTTACCAATT+GGG | - | chr2_3:52758409-52758428 | Msa0298620:intron | 30.0% |
| GATTATGCAATATGCAACTA+GGG | + | chr2_3:52758468-52758487 | None:intergenic | 30.0% | |
| TGATTATGCAATATGCAACT+AGG | + | chr2_3:52758469-52758488 | None:intergenic | 30.0% | |
| TGTTAAAATTAGTCGGAGAT+TGG | + | chr2_3:52758746-52758765 | None:intergenic | 30.0% | |
| TAGATCACAAAAAGAGTCAA+AGG | + | chr2_3:52758954-52758973 | None:intergenic | 30.0% | |
| ! | GGTTTTCATTAAGATATTGG+TGG | - | chr2_3:52759009-52759028 | Msa0298620:intron | 30.0% |
| CAATAAGATCAACAAGTGTA+TGG | - | chr2_3:52759051-52759070 | Msa0298620:intron | 30.0% | |
| TCAACAAGTGTATGGTTTAT+AGG | - | chr2_3:52759059-52759078 | Msa0298620:intron | 30.0% | |
| !! | AGTCTTTGAAGTAACACAAA+AGG | - | chr2_3:52759124-52759143 | Msa0298620:intron | 30.0% |
| !! | TGTATCTAGTAGTTTGTTAC+TGG | - | chr2_3:52759339-52759358 | Msa0298620:CDS | 30.0% |
| GACTTGAAAATGGTAGATAA+GGG | + | chr2_3:52759407-52759426 | None:intergenic | 30.0% | |
| TGACTTGAAAATGGTAGATA+AGG | + | chr2_3:52759408-52759427 | None:intergenic | 30.0% | |
| !! | AAAAAGTGCTGACTTGAAAA+TGG | + | chr2_3:52759417-52759436 | None:intergenic | 30.0% |
| CAGGAGTAATATCAACTTAT+AGG | + | chr2_3:52759473-52759492 | None:intergenic | 30.0% | |
| TACAAAATGTGTAACACCTT+AGG | - | chr2_3:52759513-52759532 | Msa0298620:CDS | 30.0% | |
| AGATTAGCGATGAAATACTA+AGG | + | chr2_3:52759565-52759584 | None:intergenic | 30.0% | |
| AACAAAGAAGAGAGAATAGG+AGG | + | chr2_3:52755329-52755348 | None:intergenic | 35.0% | |
| GGTAACAAAGAAGAGAGAAT+AGG | + | chr2_3:52755332-52755351 | None:intergenic | 35.0% | |
| !! | TTGTGAAGGTGTTGTTGATA+CGG | + | chr2_3:52755353-52755372 | None:intergenic | 35.0% |
| AAGAAACCATGGAATTGTGA+AGG | + | chr2_3:52755367-52755386 | None:intergenic | 35.0% | |
| TTGCTTTCTCATGTGAATCT+TGG | - | chr2_3:52755385-52755404 | Msa0298620:CDS | 35.0% | |
| AATCTTGGTTCACATACACT+TGG | - | chr2_3:52755400-52755419 | Msa0298620:CDS | 35.0% | |
| !! | GGATATGTTTTGTTAACAGC+AGG | + | chr2_3:52755453-52755472 | None:intergenic | 35.0% |
| GTTAACAATGTCCAAATTGG+TGG | - | chr2_3:52755875-52755894 | Msa0298620:intron | 35.0% | |
| ACAGTGTTCAATGTGATGAT+TGG | + | chr2_3:52756101-52756120 | None:intergenic | 35.0% | |
| ! | TAACAAGCTAGCTTATTAGC+TGG | + | chr2_3:52756149-52756168 | None:intergenic | 35.0% |
| !! | GCTTGTTATGTTTCTGATGA+TGG | - | chr2_3:52756161-52756180 | Msa0298620:intron | 35.0% |
| ! | TTCTGGTGAATCATCACTTT+TGG | + | chr2_3:52756309-52756328 | None:intergenic | 35.0% |
| CACCAGAATTCAAACAAGAA+TGG | - | chr2_3:52756321-52756340 | Msa0298620:CDS | 35.0% | |
| ACACAAAGATGAATCGTCAA+TGG | + | chr2_3:52756472-52756491 | None:intergenic | 35.0% | |
| TTGGAATGAAGCTGAATTTC+GGG | + | chr2_3:52756545-52756564 | None:intergenic | 35.0% | |
| TTCAGCTTCATTCCAATTTG+AGG | - | chr2_3:52756549-52756568 | Msa0298620:CDS | 35.0% | |
| TCAGCTTCATTCCAATTTGA+GGG | - | chr2_3:52756550-52756569 | Msa0298620:CDS | 35.0% | |
| ATGCAAGAACCAGAAATACT+TGG | + | chr2_3:52756754-52756773 | None:intergenic | 35.0% | |
| GACTAGGAATGAACTAATTG+AGG | + | chr2_3:52756804-52756823 | None:intergenic | 35.0% | |
| ! | CAATTAGGTTCATATCGACT+AGG | + | chr2_3:52756820-52756839 | None:intergenic | 35.0% |
| AACTCATGTGTGAGTCAATT+AGG | + | chr2_3:52756835-52756854 | None:intergenic | 35.0% | |
| ! | TATGCGTTGACAGGTTATAT+TGG | - | chr2_3:52756880-52756899 | Msa0298620:CDS | 35.0% |
| ATATTGGATGGTCATTCTGA+TGG | - | chr2_3:52756896-52756915 | Msa0298620:CDS | 35.0% | |
| CTGGATATGTAGATTAAGTG+AGG | + | chr2_3:52756926-52756945 | None:intergenic | 35.0% | |
| ATAATTTGGTCTCTTCTCTC+TGG | + | chr2_3:52756945-52756964 | None:intergenic | 35.0% | |
| ! | GTTCAACATAAAAGGAGCAT+TGG | + | chr2_3:52757119-52757138 | None:intergenic | 35.0% |
| CAGTCTACGTTCAACATAAA+AGG | + | chr2_3:52757127-52757146 | None:intergenic | 35.0% | |
| ! | TTTTTGCAGTACATGATAGG+GGG | - | chr2_3:52757389-52757408 | Msa0298620:CDS | 35.0% |
| AATAGCATATCTTCTGTGGA+AGG | + | chr2_3:52757456-52757475 | None:intergenic | 35.0% | |
| CGTAAATAGCATATCTTCTG+TGG | + | chr2_3:52757460-52757479 | None:intergenic | 35.0% | |
| GGACACGATTGATAAAAATG+TGG | - | chr2_3:52757581-52757600 | Msa0298620:CDS | 35.0% | |
| TCAGCAACACAAGTTATAGA+AGG | - | chr2_3:52757922-52757941 | Msa0298620:intron | 35.0% | |
| CAGCAACACAAGTTATAGAA+GGG | - | chr2_3:52757923-52757942 | Msa0298620:intron | 35.0% | |
| GGGAGTGATTATTCTACTAA+TGG | - | chr2_3:52757943-52757962 | Msa0298620:intron | 35.0% | |
| GCTTCCTCTATAAAATTGGA+AGG | + | chr2_3:52757976-52757995 | None:intergenic | 35.0% | |
| ATATCAGAAGATGTACCAAC+TGG | - | chr2_3:52758182-52758201 | Msa0298620:intron | 35.0% | |
| CTTTGCATATTCAATCCAGT+TGG | + | chr2_3:52758200-52758219 | None:intergenic | 35.0% | |
| CAACTGGATTGAATATGCAA+AGG | - | chr2_3:52758198-52758217 | Msa0298620:CDS | 35.0% | |
| GGATTGAATATGCAAAGGAA+AGG | - | chr2_3:52758203-52758222 | Msa0298620:CDS | 35.0% | |
| TGAATATGCAAAGGAAAGGT+TGG | - | chr2_3:52758207-52758226 | Msa0298620:CDS | 35.0% | |
| ATTGTAGTAAGTAATCCTCC+GGG | + | chr2_3:52758281-52758300 | None:intergenic | 35.0% | |
| CATTGTAGTAAGTAATCCTC+CGG | + | chr2_3:52758282-52758301 | None:intergenic | 35.0% | |
| CAATGATCCAACAAAAGAGA+TGG | - | chr2_3:52758297-52758316 | Msa0298620:CDS | 35.0% | |
| TGCTAAAGAAGACAACTGTA+AGG | + | chr2_3:52758331-52758350 | None:intergenic | 35.0% | |
| !! | CTTATTGTTGGCTTACCAAT+TGG | - | chr2_3:52758408-52758427 | Msa0298620:intron | 35.0% |
| !! | TATTGTTGGCTTACCAATTG+GGG | - | chr2_3:52758410-52758429 | Msa0298620:intron | 35.0% |
| ! | TAACACCAGTATTTTTCCTG+AGG | - | chr2_3:52758490-52758509 | Msa0298620:CDS | 35.0% |
| TCTAACCTCAGGAAAAATAC+TGG | + | chr2_3:52758498-52758517 | None:intergenic | 35.0% | |
| GAATGTCAATATCTAACCTC+AGG | + | chr2_3:52758509-52758528 | None:intergenic | 35.0% | |
| !! | ACATTCAATTTCTAGTGCCA+AGG | - | chr2_3:52758523-52758542 | Msa0298620:CDS | 35.0% |
| TAACCAGCTTGCAATTAACT+AGG | + | chr2_3:52758647-52758666 | None:intergenic | 35.0% | |
| !! | CAAGTTGGTTAAGCTTAGTT+AGG | + | chr2_3:52758703-52758722 | None:intergenic | 35.0% |
| ATTAGTTGCAACTTGCAAGT+TGG | + | chr2_3:52758718-52758737 | None:intergenic | 35.0% | |
| TGGAATAAGACAGTGTGAAA+AGG | + | chr2_3:52758912-52758931 | None:intergenic | 35.0% | |
| !! | TTTTCACACTGTCTTATTCC+AGG | - | chr2_3:52758911-52758930 | Msa0298620:intron | 35.0% |
| ! | TTTCACACTGTCTTATTCCA+GGG | - | chr2_3:52758912-52758931 | Msa0298620:intron | 35.0% |
| TGCAATTAGAAGCTCATAGT+GGG | - | chr2_3:52759282-52759301 | Msa0298620:intron | 35.0% | |
| ! | TTGTTTGCTAGGGGTAAATA+TGG | - | chr2_3:52759377-52759396 | Msa0298620:CDS | 35.0% |
| ! | TGTTTGCTAGGGGTAAATAT+GGG | - | chr2_3:52759378-52759397 | Msa0298620:CDS | 35.0% |
| ! | CATACAGAGGGAGATTTTCT+TGG | + | chr2_3:52755251-52755270 | None:intergenic | 40.0% |
| ACAACACCTTCACAATTCCA+TGG | - | chr2_3:52755358-52755377 | Msa0298620:CDS | 40.0% | |
| CATGAGAAAGCAAGAAACCA+TGG | + | chr2_3:52755378-52755397 | None:intergenic | 40.0% | |
| TTACATACCGTTGAAGGAGA+CGG | + | chr2_3:52755479-52755498 | None:intergenic | 40.0% | |
| AATGATCGACGAAGTCACTT+TGG | + | chr2_3:52755804-52755823 | None:intergenic | 40.0% | |
| ! | GACTTCGTCGATCATTGATT+TGG | - | chr2_3:52755808-52755827 | Msa0298620:CDS | 40.0% |
| GTCACAAACAAATCCACACA+TGG | + | chr2_3:52756053-52756072 | None:intergenic | 40.0% | |
| !! | ATGATTGGTGGTTCTAGAAC+AGG | + | chr2_3:52756086-52756105 | None:intergenic | 40.0% |
| GTGTTCAATGTGATGATTGG+TGG | + | chr2_3:52756098-52756117 | None:intergenic | 40.0% | |
| ! | GAACACTGTTTTGTCTCTGT+TGG | - | chr2_3:52756112-52756131 | Msa0298620:intron | 40.0% |
| !!! | GGGTCACATCTTCCATTTTT+TGG | + | chr2_3:52756525-52756544 | None:intergenic | 40.0% |
| CTGCAAATTCTCCCTCAAAT+TGG | + | chr2_3:52756564-52756583 | None:intergenic | 40.0% | |
| ! | CACTTACATTATGCGTTGAC+AGG | - | chr2_3:52756871-52756890 | Msa0298620:CDS | 40.0% |
| CGTTGACAGGTTATATTGGA+TGG | - | chr2_3:52756884-52756903 | Msa0298620:CDS | 40.0% | |
| TACCAACACATTCATAGCTC+CGG | + | chr2_3:52756984-52757003 | None:intergenic | 40.0% | |
| AATTTGCAGACAAGAGTCTC+TGG | - | chr2_3:52757085-52757104 | Msa0298620:intron | 40.0% | |
| ! | GGAATAAAAGACGACCCTTT+TGG | - | chr2_3:52757259-52757278 | Msa0298620:intron | 40.0% |
| !! | ACGACCCTTTTGGAAATCAA+TGG | - | chr2_3:52757269-52757288 | Msa0298620:intron | 40.0% |
| !! | CGACCCTTTTGGAAATCAAT+GGG | - | chr2_3:52757270-52757289 | Msa0298620:intron | 40.0% |
| !! | CCACCCATTGATTTCCAAAA+GGG | + | chr2_3:52757276-52757295 | None:intergenic | 40.0% |
| GTGTTTGATCCTCCATAGTA+TGG | + | chr2_3:52757434-52757453 | None:intergenic | 40.0% | |
| AGTGACAGATAGAGATAGAG+CGG | - | chr2_3:52757641-52757660 | Msa0298620:CDS | 40.0% | |
| !!! | TTTTGAAACTTCAGATGGGC+TGG | - | chr2_3:52758147-52758166 | Msa0298620:intron | 40.0% |
| ! | CTGAAGACCATCTCTTTTGT+TGG | + | chr2_3:52758307-52758326 | None:intergenic | 40.0% |
| CAACAAAAGAGATGGTCTTC+AGG | - | chr2_3:52758305-52758324 | Msa0298620:intron | 40.0% | |
| TAGCAAGCATTCTCCTGTTA+TGG | - | chr2_3:52758346-52758365 | Msa0298620:intron | 40.0% | |
| AGCAAGCATTCTCCTGTTAT+GGG | - | chr2_3:52758347-52758366 | Msa0298620:intron | 40.0% | |
| ! | GGTAAAATCCAATTTAGGGC+TGG | - | chr2_3:52758380-52758399 | Msa0298620:intron | 40.0% |
| GTACCTAGTTAATTGCAAGC+TGG | - | chr2_3:52758641-52758660 | Msa0298620:CDS | 40.0% | |
| TTGGTGGAACAATCAGAGAA+TGG | - | chr2_3:52759025-52759044 | Msa0298620:intron | 40.0% | |
| TATCCCTAAGAGCTTAAGCA+TGG | + | chr2_3:52759096-52759115 | None:intergenic | 40.0% | |
| CAAAAGGAAAGTCCAACTTC+TGG | - | chr2_3:52759140-52759159 | Msa0298620:intron | 40.0% | |
| !! | AGTCCAACTTCTGGTGTTAT+TGG | - | chr2_3:52759149-52759168 | Msa0298620:intron | 40.0% |
| TCTCCAATAACACCAGAAGT+TGG | + | chr2_3:52759155-52759174 | None:intergenic | 40.0% | |
| ATTGGAGATGATGCAAATGC+TGG | - | chr2_3:52759167-52759186 | Msa0298620:intron | 40.0% | |
| TGTCAACTGCACAAGCAAAA+TGG | + | chr2_3:52759237-52759256 | None:intergenic | 40.0% | |
| GTGCAATTAGAAGCTCATAG+TGG | - | chr2_3:52759281-52759300 | Msa0298620:intron | 40.0% | |
| TGTTACTGGCCATTTCTGAA+AGG | - | chr2_3:52759353-52759372 | Msa0298620:CDS | 40.0% | |
| ! | GTTACTGGCCATTTCTGAAA+GGG | - | chr2_3:52759354-52759373 | Msa0298620:CDS | 40.0% |
| GCAAACAACCCTTTCAGAAA+TGG | + | chr2_3:52759365-52759384 | None:intergenic | 40.0% | |
| ! | TTCTGAAAGGGTTGTTTGCT+AGG | - | chr2_3:52759366-52759385 | Msa0298620:CDS | 40.0% |
| ! | TCTGAAAGGGTTGTTTGCTA+GGG | - | chr2_3:52759367-52759386 | Msa0298620:CDS | 40.0% |
| GTTGGCCATTCTGCATATGA+TGG | + | chr2_3:52755229-52755248 | None:intergenic | 45.0% | |
| ! | CAGAGGGAGATTTTCTTGGT+TGG | + | chr2_3:52755247-52755266 | None:intergenic | 45.0% |
| GTTAACAGCAGGACTCCATT+TGG | + | chr2_3:52755442-52755461 | None:intergenic | 45.0% | |
| ATCCAAACCGTCTCCTTCAA+CGG | - | chr2_3:52755469-52755488 | Msa0298620:CDS | 45.0% | |
| ATACGCTTCGATCGTGATCA+TGG | + | chr2_3:52755775-52755794 | None:intergenic | 45.0% | |
| GTTGAACGTAGACTGTGACA+TGG | - | chr2_3:52757132-52757151 | Msa0298620:intron | 45.0% | |
| !! | CCCTTTTGGAAATCAATGGG+TGG | - | chr2_3:52757273-52757292 | Msa0298620:intron | 45.0% |
| !! | GCCACCCATTGATTTCCAAA+AGG | + | chr2_3:52757277-52757296 | None:intergenic | 45.0% |
| GGACTTCAAGGACCATACTA+TGG | - | chr2_3:52757419-52757438 | Msa0298620:intron | 45.0% | |
| CTTCAAGGACCATACTATGG+AGG | - | chr2_3:52757422-52757441 | Msa0298620:intron | 45.0% | |
| !! | AGATAGAGCGGTGTCACATA+TGG | - | chr2_3:52757653-52757672 | Msa0298620:CDS | 45.0% |
| ! | TAGCACTTGTTGGGGTAAAC+AGG | - | chr2_3:52758026-52758045 | Msa0298620:intron | 45.0% |
| !! | CTTCAGATGGGCTGGTTATA+TGG | - | chr2_3:52758155-52758174 | Msa0298620:intron | 45.0% |
| AAGACAAGCCAGCCCTAAAT+TGG | + | chr2_3:52758391-52758410 | None:intergenic | 45.0% | |
| AGTGCCATGCTTAAGCTCTT+AGG | - | chr2_3:52759089-52759108 | Msa0298620:intron | 45.0% | |
| GTGCCATGCTTAAGCTCTTA+GGG | - | chr2_3:52759090-52759109 | Msa0298620:intron | 45.0% | |
| GAGATGATGCAAATGCTGGT+AGG | - | chr2_3:52759171-52759190 | Msa0298620:intron | 45.0% | |
| TTGTGCCAACCACAAAAGCT+GGG | + | chr2_3:52759214-52759233 | None:intergenic | 45.0% | |
| ! | AGTGGGAAAGAGTGTGGAAT+AGG | - | chr2_3:52759299-52759318 | Msa0298620:intron | 45.0% |
| ! | CTGAAAGGGTTGTTTGCTAG+GGG | - | chr2_3:52759368-52759387 | Msa0298620:CDS | 45.0% |
| TACCGTTGAAGGAGACGGTT+TGG | + | chr2_3:52755474-52755493 | None:intergenic | 50.0% | |
| GGAAGCTCCTGTACTCTATG+AGG | + | chr2_3:52756032-52756051 | None:intergenic | 50.0% | |
| AGTACAGGAGCTTCCATGTG+TGG | - | chr2_3:52756037-52756056 | Msa0298620:intron | 50.0% | |
| AGCCGGAGCTATGAATGTGT+TGG | - | chr2_3:52756979-52756998 | Msa0298620:intron | 50.0% | |
| TCAATGGGTGGCTGCATTTG+AGG | - | chr2_3:52757285-52757304 | Msa0298620:intron | 50.0% | |
| GCAGTACATGATAGGGGGTA+TGG | - | chr2_3:52757394-52757413 | Msa0298620:CDS | 50.0% | |
| ! | TACATGATAGGGGGTATGGC+AGG | - | chr2_3:52757398-52757417 | Msa0298620:CDS | 50.0% |
| !! | CCAAAGAGGGTACCCATAAC+AGG | + | chr2_3:52758362-52758381 | None:intergenic | 50.0% |
| CCTGTTATGGGTACCCTCTT+TGG | - | chr2_3:52758359-52758378 | Msa0298620:intron | 50.0% | |
| !! | GGGCTGGCTTGTCTTATTGT+TGG | - | chr2_3:52758396-52758415 | Msa0298620:intron | 50.0% |
| TACCAATTGGGGTCTGCGTT+CGG | - | chr2_3:52758421-52758440 | Msa0298620:intron | 50.0% | |
| ! | ACTGTCTTATTCCAGGGAGC+TGG | - | chr2_3:52758918-52758937 | Msa0298620:intron | 50.0% |
| ! | CTGTCTTATTCCAGGGAGCT+GGG | - | chr2_3:52758919-52758938 | Msa0298620:intron | 50.0% |
| ! | TGATGAGTCCCCAGCTTTTG+TGG | - | chr2_3:52759202-52759221 | Msa0298620:intron | 50.0% |
| TGTGCCAACCACAAAAGCTG+GGG | + | chr2_3:52759213-52759232 | None:intergenic | 50.0% | |
| GTTGTGCCAACCACAAAAGC+TGG | + | chr2_3:52759215-52759234 | None:intergenic | 50.0% | |
| ! | GCTCATAGTGGGAAAGAGTG+TGG | - | chr2_3:52759293-52759312 | Msa0298620:intron | 50.0% |
| TATTCCAGGGAGCTGGGCTA+TGG | - | chr2_3:52758925-52758944 | Msa0298620:intron | 55.0% | |
| ! | GAGTCCCCAGCTTTTGTGGT+TGG | - | chr2_3:52759206-52759225 | Msa0298620:intron | 55.0% |
| ! | GGGGGTATGGCAGGACTTCA+AGG | - | chr2_3:52757407-52757426 | Msa0298620:intron | 60.0% |
| ! | CCTGTAAACGCGGTTGGCTC+GGG | + | chr2_3:52758251-52758270 | None:intergenic | 60.0% |
| ! | GCCTGTAAACGCGGTTGGCT+CGG | + | chr2_3:52758252-52758271 | None:intergenic | 60.0% |
| GCACAGCCTGTAAACGCGGT+TGG | + | chr2_3:52758257-52758276 | None:intergenic | 60.0% | |
| ! | GGGAGCACAGCCTGTAAACG+CGG | + | chr2_3:52758261-52758280 | None:intergenic | 60.0% |
| GCGTTTACAGGCTGTGCTCC+CGG | - | chr2_3:52758260-52758279 | Msa0298620:CDS | 60.0% | |
| TTTACAGGCTGTGCTCCCGG+AGG | - | chr2_3:52758263-52758282 | Msa0298620:CDS | 60.0% | |
| GACCGAACGCAGACCCCAAT+TGG | + | chr2_3:52758426-52758445 | None:intergenic | 60.0% | |
| GAATCCATAGCCCAGCTCCC+TGG | + | chr2_3:52758932-52758951 | None:intergenic | 60.0% | |
| CCCGAGCCAACCGCGTTTAC+AGG | - | chr2_3:52758248-52758267 | Msa0298620:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 52755209 | 52759613 | 52755209 | ID=Msa0298620;Name=Msa0298620 |
| chr2_3 | mRNA | 52755209 | 52759613 | 52755209 | ID=Msa0298620-mRNA-1;Parent=Msa0298620;Name=Msa0298620-mRNA-1;_AED=0.05;_eAED=0.05;_QI=31|1|1|1|0.88|0.8|10|107|739 |
| chr2_3 | exon | 52755209 | 52755274 | 52755209 | ID=Msa0298620-mRNA-1:exon:16867;Parent=Msa0298620-mRNA-1 |
| chr2_3 | exon | 52755300 | 52755889 | 52755300 | ID=Msa0298620-mRNA-1:exon:16866;Parent=Msa0298620-mRNA-1 |
| chr2_3 | exon | 52756311 | 52756661 | 52756311 | ID=Msa0298620-mRNA-1:exon:16865;Parent=Msa0298620-mRNA-1 |
| chr2_3 | exon | 52756775 | 52756959 | 52756775 | ID=Msa0298620-mRNA-1:exon:16864;Parent=Msa0298620-mRNA-1 |
| chr2_3 | exon | 52757307 | 52757424 | 52757307 | ID=Msa0298620-mRNA-1:exon:16863;Parent=Msa0298620-mRNA-1 |
| chr2_3 | exon | 52757516 | 52757728 | 52757516 | ID=Msa0298620-mRNA-1:exon:16862;Parent=Msa0298620-mRNA-1 |
| chr2_3 | exon | 52757822 | 52757929 | 52757822 | ID=Msa0298620-mRNA-1:exon:16861;Parent=Msa0298620-mRNA-1 |
| chr2_3 | exon | 52758195 | 52758320 | 52758195 | ID=Msa0298620-mRNA-1:exon:16860;Parent=Msa0298620-mRNA-1 |
| chr2_3 | exon | 52758467 | 52758785 | 52758467 | ID=Msa0298620-mRNA-1:exon:16859;Parent=Msa0298620-mRNA-1 |
| chr2_3 | exon | 52759332 | 52759613 | 52759332 | ID=Msa0298620-mRNA-1:exon:16858;Parent=Msa0298620-mRNA-1 |
| chr2_3 | five_prime_UTR | 52759583 | 52759613 | 52759583 | ID=Msa0298620-mRNA-1:five_prime_utr;Parent=Msa0298620-mRNA-1 |
| chr2_3 | CDS | 52759332 | 52759582 | 52759332 | ID=Msa0298620-mRNA-1:cds;Parent=Msa0298620-mRNA-1 |
| chr2_3 | CDS | 52758467 | 52758785 | 52758467 | ID=Msa0298620-mRNA-1:cds;Parent=Msa0298620-mRNA-1 |
| chr2_3 | CDS | 52758195 | 52758320 | 52758195 | ID=Msa0298620-mRNA-1:cds;Parent=Msa0298620-mRNA-1 |
| chr2_3 | CDS | 52757822 | 52757929 | 52757822 | ID=Msa0298620-mRNA-1:cds;Parent=Msa0298620-mRNA-1 |
| chr2_3 | CDS | 52757516 | 52757728 | 52757516 | ID=Msa0298620-mRNA-1:cds;Parent=Msa0298620-mRNA-1 |
| chr2_3 | CDS | 52757307 | 52757424 | 52757307 | ID=Msa0298620-mRNA-1:cds;Parent=Msa0298620-mRNA-1 |
| chr2_3 | CDS | 52756775 | 52756959 | 52756775 | ID=Msa0298620-mRNA-1:cds;Parent=Msa0298620-mRNA-1 |
| chr2_3 | CDS | 52756311 | 52756661 | 52756311 | ID=Msa0298620-mRNA-1:cds;Parent=Msa0298620-mRNA-1 |
| chr2_3 | CDS | 52755341 | 52755889 | 52755341 | ID=Msa0298620-mRNA-1:cds;Parent=Msa0298620-mRNA-1 |
| chr2_3 | three_prime_UTR | 52755300 | 52755340 | 52755300 | ID=Msa0298620-mRNA-1:three_prime_utr;Parent=Msa0298620-mRNA-1 |
| chr2_3 | three_prime_UTR | 52755209 | 52755274 | 52755209 | ID=Msa0298620-mRNA-1:three_prime_utr;Parent=Msa0298620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
