Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0330880 | XP_013464426.1 | 93.325 | 779 | 30 | 1 | 1 | 779 | 2 | 758 | 0.0 | 1445 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0330880 | sp|Q93XX4|C2D61_ARATH | 63.843 | 661 | 190 | 10 | 5 | 657 | 2 | 621 | 0.0 | 847 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0119440 | Msa0330880 | 0.806129 | 9.555986e-50 | -8.615850e-47 |
Msa0130850 | Msa0330880 | 0.811288 | 7.546896e-51 | -8.615850e-47 |
Msa0162690 | Msa0330880 | 0.806409 | 8.343973e-50 | -8.615850e-47 |
Msa0330880 | Msa0472720 | 0.802270 | 6.074069e-49 | -8.615850e-47 |
Msa0330880 | Msa0860250 | 0.816746 | 4.716898e-52 | -8.615850e-47 |
Msa0330880 | Msa1323870 | 0.843184 | 1.638255e-58 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0330880 | MtrunA17_Chr2g0313621 | 93.325 | 779 | 30 | 1 | 1 | 779 | 2 | 758 | 0.0 | 1445 |
Msa0330880 | MtrunA17_Chr1g0156811 | 26.190 | 294 | 187 | 11 | 93 | 380 | 67 | 336 | 6.48e-18 | 87.8 |
Msa0330880 | MtrunA17_Chr6g0484401 | 32.576 | 132 | 77 | 3 | 297 | 420 | 597 | 724 | 8.37e-16 | 82.0 |
Msa0330880 | MtrunA17_Chr1g0199571 | 25.000 | 292 | 190 | 10 | 93 | 378 | 67 | 335 | 8.71e-16 | 81.3 |
Msa0330880 | MtrunA17_Chr2g0290721 | 46.341 | 82 | 41 | 2 | 310 | 390 | 5 | 84 | 6.82e-14 | 75.9 |
Msa0330880 | MtrunA17_Chr4g0064531 | 22.099 | 362 | 253 | 10 | 59 | 409 | 25 | 368 | 1.07e-13 | 74.7 |
Msa0330880 | MtrunA17_Chr4g0037111 | 24.908 | 273 | 176 | 9 | 93 | 359 | 67 | 316 | 1.20e-13 | 73.2 |
Msa0330880 | MtrunA17_Chr8g0351231 | 26.421 | 299 | 191 | 11 | 95 | 386 | 68 | 344 | 3.30e-13 | 72.8 |
Msa0330880 | MtrunA17_Chr8g0391121 | 30.435 | 115 | 75 | 2 | 306 | 419 | 613 | 723 | 8.86e-13 | 72.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0330880 | AT3G14590.2 | 65.172 | 669 | 194 | 10 | 23 | 683 | 20 | 657 | 0.0 | 850 |
Msa0330880 | AT1G53590.1 | 63.843 | 661 | 190 | 10 | 5 | 657 | 2 | 621 | 0.0 | 847 |
Msa0330880 | AT3G14590.3 | 65.385 | 650 | 186 | 10 | 42 | 683 | 8 | 626 | 0.0 | 822 |
Msa0330880 | AT3G14590.1 | 65.265 | 642 | 184 | 10 | 50 | 683 | 2 | 612 | 0.0 | 809 |
Msa0330880 | AT3G14590.5 | 65.862 | 580 | 181 | 9 | 112 | 683 | 1 | 571 | 0.0 | 741 |
Msa0330880 | AT3G14590.4 | 64.801 | 554 | 178 | 9 | 138 | 683 | 25 | 569 | 0.0 | 691 |
Msa0330880 | AT1G05500.1 | 24.000 | 325 | 224 | 9 | 89 | 409 | 63 | 368 | 9.32e-17 | 84.7 |
Msa0330880 | AT5G04220.3 | 22.393 | 326 | 212 | 11 | 93 | 413 | 5 | 294 | 2.04e-14 | 77.0 |
Msa0330880 | AT1G03370.2 | 39.450 | 109 | 60 | 3 | 309 | 413 | 4 | 110 | 4.26e-14 | 77.0 |
Msa0330880 | AT1G03370.1 | 39.450 | 109 | 60 | 3 | 309 | 413 | 4 | 110 | 5.04e-14 | 76.6 |
Msa0330880 | AT5G04220.2 | 22.393 | 326 | 212 | 11 | 93 | 413 | 67 | 356 | 6.29e-14 | 75.9 |
Msa0330880 | AT1G20080.2 | 23.247 | 271 | 179 | 9 | 93 | 357 | 67 | 314 | 8.40e-14 | 75.5 |
Msa0330880 | AT1G20080.3 | 23.247 | 271 | 179 | 9 | 93 | 357 | 67 | 314 | 8.40e-14 | 75.5 |
Msa0330880 | AT1G20080.4 | 23.247 | 271 | 179 | 9 | 93 | 357 | 67 | 314 | 8.40e-14 | 75.5 |
Msa0330880 | AT1G20080.1 | 23.247 | 271 | 179 | 9 | 93 | 357 | 67 | 314 | 8.40e-14 | 75.5 |
Msa0330880 | AT1G20080.5 | 23.247 | 271 | 179 | 9 | 93 | 357 | 67 | 314 | 8.40e-14 | 75.5 |
Msa0330880 | AT3G18370.1 | 34.545 | 110 | 67 | 2 | 312 | 420 | 611 | 716 | 4.99e-13 | 73.6 |
Msa0330880 | AT3G61050.2 | 23.794 | 311 | 207 | 11 | 95 | 398 | 68 | 355 | 1.65e-11 | 68.2 |
Msa0330880 | AT3G61050.1 | 23.794 | 311 | 207 | 11 | 95 | 398 | 68 | 355 | 1.65e-11 | 68.2 |
Find 198 sgRNAs with CRISPR-Local
Find 441 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGAATTCCTCTTGCCATTT+TGG | 0.089795 | 2_4:+45984816 | None:intergenic |
TTCTGTTCAGCACCTATATT+TGG | 0.118354 | 2_4:-45986342 | Msa0330880:CDS |
CTCACTGCTCACTGTGATTT+TGG | 0.124370 | 2_4:-45986916 | Msa0330880:CDS |
ATAAACCCCGCTTGCGAAAA+AGG | 0.139948 | 2_4:+45988009 | None:intergenic |
AAGAAATAGTGGCAGATAAA+AGG | 0.165502 | 2_4:-45981321 | Msa0330880:CDS |
ACTTTAGTTCTTGCATCTTT+TGG | 0.183440 | 2_4:+45981550 | None:intergenic |
AGCAGTGAGCTCTGCAATTT+TGG | 0.197400 | 2_4:+45986930 | None:intergenic |
CTTCAATATCTATTGTTTCT+TGG | 0.202407 | 2_4:+45982313 | None:intergenic |
ATCTGGAAAATCTCCAAAAT+TGG | 0.203589 | 2_4:-45982232 | Msa0330880:CDS |
TCATAGTTATCTGCCAATTT+TGG | 0.215229 | 2_4:+45982219 | None:intergenic |
AATAGATTGAGTTGAATAAT+TGG | 0.225408 | 2_4:+45988190 | None:intergenic |
TTATATGTTATGTTATATTT+TGG | 0.237466 | 2_4:-45981044 | Msa0330880:three_prime_UTR |
CACCTTTGATTACTGATATC+AGG | 0.238503 | 2_4:-45986310 | Msa0330880:CDS |
GGTGATAAAGTGTTGCAATT+AGG | 0.239091 | 2_4:+45988156 | None:intergenic |
ACTCATTAAATTTCACTTCT+TGG | 0.241463 | 2_4:-45987897 | Msa0330880:five_prime_UTR |
AACCTCATTCACATCGGATT+TGG | 0.244362 | 2_4:+45981489 | None:intergenic |
GGCTTTGATCTATCTTTATC+TGG | 0.247822 | 2_4:-45987748 | Msa0330880:intron |
AACCACATTCACATCGGATT+TGG | 0.255125 | 2_4:+45981450 | None:intergenic |
ATTTGGGGAACTTCGCTTCC+TGG | 0.256187 | 2_4:+45982147 | None:intergenic |
ACCTCATTCACATCGGATTT+GGG | 0.265677 | 2_4:+45981490 | None:intergenic |
GGCTGTAATTCAGCTGTATC+TGG | 0.277405 | 2_4:-45982054 | Msa0330880:CDS |
TCCTTGACATCTCTCTTTGC+CGG | 0.279545 | 2_4:+45981736 | None:intergenic |
GTGATAAAGTGTTGCAATTA+GGG | 0.282411 | 2_4:+45988157 | None:intergenic |
ATTTCGTAGGAGTCGGAAAA+TGG | 0.284800 | 2_4:-45981935 | Msa0330880:CDS |
TCTCTCTTTGCCGGGCTATC+AGG | 0.298174 | 2_4:+45981745 | None:intergenic |
AGAAAACACTTTCTCCAAAA+TGG | 0.300673 | 2_4:-45984830 | Msa0330880:CDS |
ACCACATTCACATCGGATTT+GGG | 0.307145 | 2_4:+45981451 | None:intergenic |
AACATCAACAACCAGCATAT+TGG | 0.311236 | 2_4:+45985317 | None:intergenic |
TTGACAGTCATCTGAAAATA+TGG | 0.314441 | 2_4:+45985768 | None:intergenic |
TCCTTATGTGAAAGGTCATT+TGG | 0.327934 | 2_4:-45984883 | Msa0330880:CDS |
CATGTAATAATCTGAGAAAA+TGG | 0.333568 | 2_4:-45981189 | Msa0330880:three_prime_UTR |
CTTTCCGACTGGTAAGATTC+AGG | 0.339765 | 2_4:-45981797 | Msa0330880:CDS |
TCCTTCTCATCCGTTTCATC+TGG | 0.345735 | 2_4:-45982249 | Msa0330880:CDS |
CATCTCCACGTGATAACATT+AGG | 0.350904 | 2_4:-45981879 | Msa0330880:CDS |
CGGAAAATGGACGATAATTC+AGG | 0.353749 | 2_4:-45981922 | Msa0330880:CDS |
CTCATTAAATTTCACTTCTT+GGG | 0.354194 | 2_4:-45987896 | Msa0330880:five_prime_UTR |
AAGTGGAAATGGTTTGGATA+TGG | 0.360654 | 2_4:+45988069 | None:intergenic |
TCTAAGAACCATGGTATGAT+AGG | 0.363312 | 2_4:+45986611 | None:intergenic |
AGTGAAACGGTGACGTATAA+AGG | 0.363921 | 2_4:+45988217 | None:intergenic |
AAGATTAATTGAAGTGGAAA+TGG | 0.364928 | 2_4:+45988058 | None:intergenic |
ACATCAACAACCAGCATATT+GGG | 0.372605 | 2_4:+45985318 | None:intergenic |
TCAATGCAGGTTCTTGAGTT+AGG | 0.375126 | 2_4:-45986174 | Msa0330880:intron |
ATGAAGCCATCAGATCTAAA+TGG | 0.379168 | 2_4:-45985000 | Msa0330880:intron |
GGTCAGTAAATGCTTCTAAA+GGG | 0.385901 | 2_4:-45981858 | Msa0330880:CDS |
ACAAGCCAGCCAGCAATTCC+TGG | 0.385953 | 2_4:+45985708 | None:intergenic |
GATGGAAAGTCCTGCGCAAT+AGG | 0.388349 | 2_4:+45981898 | None:intergenic |
ATTACATGTGTTTATATGTC+GGG | 0.388980 | 2_4:+45981204 | None:intergenic |
AGAAATAGTGGCAGATAAAA+GGG | 0.391851 | 2_4:-45981320 | Msa0330880:CDS |
CATTTCTATGATGACATCCT+TGG | 0.399030 | 2_4:-45984732 | Msa0330880:CDS |
GGTTGGCGTGAAGTTTGTTA+TGG | 0.403419 | 2_4:-45981836 | Msa0330880:CDS |
TAATTGAAGTGGAAATGGTT+TGG | 0.403668 | 2_4:+45988063 | None:intergenic |
ATAGATTGAGTTGAATAATT+GGG | 0.406354 | 2_4:+45988191 | None:intergenic |
GTTACAATCCCATGTTATGA+TGG | 0.407165 | 2_4:+45984788 | None:intergenic |
AATAACAGTTCTTGATGATA+AGG | 0.416703 | 2_4:-45984120 | Msa0330880:CDS |
AAACATATGGCCTATATGTA+TGG | 0.422201 | 2_4:-45986663 | Msa0330880:CDS |
CAAATATCTTTACCTTGGTC+TGG | 0.430139 | 2_4:+45985279 | None:intergenic |
ACAGAACTTCCAGGAATTGC+TGG | 0.430424 | 2_4:-45985717 | Msa0330880:CDS |
CAAGGATGTCATCATAGAAA+TGG | 0.432627 | 2_4:+45984733 | None:intergenic |
GTGGGTTTCTTCCCAAATAT+AGG | 0.432753 | 2_4:+45986330 | None:intergenic |
GTTATGGATGATAACATTGC+TGG | 0.435695 | 2_4:-45981820 | Msa0330880:CDS |
ATCTTATTGTTATAGAGCCT+TGG | 0.437260 | 2_4:-45985086 | Msa0330880:intron |
CCTTATGTGAAAGGTCATTT+GGG | 0.442994 | 2_4:-45984882 | Msa0330880:CDS |
GCAATCTGTTCCATACATAT+AGG | 0.443303 | 2_4:+45986653 | None:intergenic |
TCTGTTCAGCACCTATATTT+GGG | 0.444459 | 2_4:-45986341 | Msa0330880:CDS |
CTTGATGTGACAGAACTTCC+AGG | 0.446186 | 2_4:-45985726 | Msa0330880:CDS |
AGGAAAGGCCTGCACAAAAT+CGG | 0.446259 | 2_4:-45981964 | Msa0330880:CDS |
TCCAAACACCTGTCTTCTCT+TGG | 0.447465 | 2_4:+45982178 | None:intergenic |
GCCAAGAGAAGACAGGTGTT+TGG | 0.448255 | 2_4:-45982179 | Msa0330880:CDS |
AGGGAACCTAACGATATATC+TGG | 0.450838 | 2_4:-45982075 | Msa0330880:CDS |
ACTGCTGCTGTCATTGTTCA+AGG | 0.451580 | 2_4:+45982029 | None:intergenic |
ATTTGGGAGGATATAGATTC+AGG | 0.451759 | 2_4:-45984866 | Msa0330880:CDS |
AAATTTCAAATATGAATTGT+CGG | 0.454393 | 2_4:-45981116 | Msa0330880:three_prime_UTR |
GTCAACAAAGCTGCATATAA+CGG | 0.454586 | 2_4:-45986076 | Msa0330880:CDS |
CCCAAATGACCTTTCACATA+AGG | 0.456580 | 2_4:+45984882 | None:intergenic |
ATGGGATTGTAACAATGTTC+TGG | 0.457201 | 2_4:-45984778 | Msa0330880:CDS |
TCAACAAAGCTGCATATAAC+GGG | 0.457469 | 2_4:-45986075 | Msa0330880:CDS |
AACATTGCTGGCTTTCCGAC+TGG | 0.458482 | 2_4:-45981808 | Msa0330880:CDS |
ATTTCTATGATGACATCCTT+GGG | 0.460075 | 2_4:-45984731 | Msa0330880:intron |
GGATGAGAAGGAACCTTTGT+TGG | 0.462679 | 2_4:+45982260 | None:intergenic |
TTAGACCTTTCAGGGGAGAA+TGG | 0.464322 | 2_4:+45981379 | None:intergenic |
ATGTTCTTTCTCGTAAATCA+AGG | 0.468368 | 2_4:-45981660 | Msa0330880:CDS |
ACCATGCAGTTGAAAACATA+TGG | 0.471248 | 2_4:-45986676 | Msa0330880:CDS |
AGGTCAGTAAATGCTTCTAA+AGG | 0.471451 | 2_4:-45981859 | Msa0330880:CDS |
TCGTATACGTGTATGCTTTG+TGG | 0.474265 | 2_4:-45985796 | Msa0330880:CDS |
CCTTGACATCTCTCTTTGCC+GGG | 0.475428 | 2_4:+45981737 | None:intergenic |
CTTGTTGACCACAGTGGTGT+TGG | 0.476585 | 2_4:+45981414 | None:intergenic |
GAAAACAATCTAATCAAAGA+AGG | 0.477365 | 2_4:-45987194 | Msa0330880:CDS |
AACATCGAATGAAAACTGTT+AGG | 0.484264 | 2_4:-45981984 | Msa0330880:CDS |
AACTTCCAGGAATTGCTGGC+TGG | 0.486710 | 2_4:-45985713 | Msa0330880:CDS |
ACAACACCAACAGCACTTAG+TGG | 0.487584 | 2_4:+45980957 | None:intergenic |
GAATAGTAAAATATTGAAAG+TGG | 0.490720 | 2_4:+45988123 | None:intergenic |
TTACAGCCAGATATATCGTT+AGG | 0.491761 | 2_4:+45982069 | None:intergenic |
TATAGAGCCTTGGTTTAAAG+TGG | 0.492151 | 2_4:-45985076 | Msa0330880:intron |
TTATCTTCAGCATTATCATC+GGG | 0.493511 | 2_4:+45982006 | None:intergenic |
TTTCTGATTCTGAAACAGTT+CGG | 0.494262 | 2_4:-45986706 | Msa0330880:CDS |
TGGAAATGGTTTGGATATGG+TGG | 0.495869 | 2_4:+45988072 | None:intergenic |
AAATTTGCAGCCCAATATGC+TGG | 0.498130 | 2_4:-45985328 | Msa0330880:intron |
CCCTCTGAATTTCTGTGTCG+AGG | 0.498634 | 2_4:+45982094 | None:intergenic |
TAGTAACCATTTAGATCTGA+TGG | 0.506393 | 2_4:+45984994 | None:intergenic |
TAAAATATTGAAAGTGGAGA+AGG | 0.506941 | 2_4:+45988129 | None:intergenic |
TATTACATGTGTTTATATGT+CGG | 0.514738 | 2_4:+45981203 | None:intergenic |
AGGGAGTGGTCCTGATAGCC+CGG | 0.515922 | 2_4:-45981755 | Msa0330880:CDS |
TGACGTATAAAGGAAGTAAC+GGG | 0.517211 | 2_4:+45988227 | None:intergenic |
TTTATCTTCAGCATTATCAT+CGG | 0.518677 | 2_4:+45982005 | None:intergenic |
AACGTTATGTTACAAGGCTA+AGG | 0.518852 | 2_4:-45987239 | Msa0330880:CDS |
CAAATGTGGGAGCCAAGAAA+AGG | 0.519554 | 2_4:-45982129 | Msa0330880:CDS |
ATAACGGGAATGCATGTTGA+AGG | 0.519584 | 2_4:-45986060 | Msa0330880:CDS |
ATGATGCAAAATTGAAACTT+CGG | 0.522606 | 2_4:+45987842 | None:intergenic |
ACATGATAAAGAAGAAATAG+TGG | 0.523972 | 2_4:-45981332 | Msa0330880:CDS |
AGTTCTTGATGATAAGGAAA+AGG | 0.524058 | 2_4:-45984114 | Msa0330880:intron |
AAGTCAAAGATTAATTGAAG+TGG | 0.526357 | 2_4:+45988052 | None:intergenic |
ACCTTTGATTACTGATATCA+GGG | 0.529556 | 2_4:-45986309 | Msa0330880:CDS |
TCCAGATGAAACGGATGAGA+AGG | 0.532280 | 2_4:+45982248 | None:intergenic |
TTTCTTGGCTCCCACATTTG+GGG | 0.533313 | 2_4:+45982132 | None:intergenic |
CTAAGAACCATGGTATGATA+GGG | 0.535211 | 2_4:+45986612 | None:intergenic |
TTCATGAACGTTATGTTACA+AGG | 0.536010 | 2_4:-45987245 | Msa0330880:CDS |
CCCCAAATCCGATGTGAATG+AGG | 0.537936 | 2_4:-45981491 | Msa0330880:CDS |
TTACAATCCCATGTTATGAT+GGG | 0.539219 | 2_4:+45984789 | None:intergenic |
GGTAAGATTCAGGTAGAAAG+TGG | 0.544585 | 2_4:-45981787 | Msa0330880:CDS |
TTGACCACAGTGGTGTTGGA+TGG | 0.548005 | 2_4:+45981418 | None:intergenic |
GCCATTGCTCCATGTAACAT+TGG | 0.548973 | 2_4:-45981517 | Msa0330880:CDS |
TCTTAGAGAAGTACAAACCT+TGG | 0.551181 | 2_4:-45986595 | Msa0330880:CDS |
TGAGAAGGAACCTTTGTTGG+TGG | 0.551198 | 2_4:+45982263 | None:intergenic |
ACACGTATACGACCAAGAAA+AGG | 0.551448 | 2_4:+45985807 | None:intergenic |
CTAATGTTATCACGTGGAGA+TGG | 0.553752 | 2_4:+45981880 | None:intergenic |
ACATGCATCAGTGTCGGTAT+CGG | 0.561681 | 2_4:-45981148 | Msa0330880:three_prime_UTR |
GAAGCGAAGTTCCCCAAATG+TGG | 0.562195 | 2_4:-45982143 | Msa0330880:CDS |
CTGATTCTGAAACAGTTCGG+TGG | 0.563534 | 2_4:-45986703 | Msa0330880:CDS |
GTAAATGCTTCTAAAGGGGT+TGG | 0.564255 | 2_4:-45981853 | Msa0330880:CDS |
CCTCATTCACATCGGATTTG+GGG | 0.564660 | 2_4:+45981491 | None:intergenic |
AAAAGCCATTCTCCCCTGAA+AGG | 0.566489 | 2_4:-45981384 | Msa0330880:CDS |
TAATTCAGGTCCTATTGCGC+AGG | 0.567039 | 2_4:-45981908 | Msa0330880:CDS |
TTCTCGTCCACTTTAAACCA+AGG | 0.567039 | 2_4:+45985069 | None:intergenic |
CTCATTCACATCGGATTTGG+GGG | 0.567758 | 2_4:+45981492 | None:intergenic |
AGATTCATCACTAGATGAGT+CGG | 0.568749 | 2_4:+45981588 | None:intergenic |
GAGTGAAGTTTCTCAAGGAA+TGG | 0.569385 | 2_4:-45985830 | Msa0330880:CDS |
CCACATTCACATCGGATTTG+GGG | 0.569763 | 2_4:+45981452 | None:intergenic |
AAATCGGTTCTGTATTTCGT+AGG | 0.570323 | 2_4:-45981948 | Msa0330880:CDS |
CTGATATCAGTAATCAAAGG+TGG | 0.571778 | 2_4:+45986311 | None:intergenic |
CACATTCACATCGGATTTGG+GGG | 0.573608 | 2_4:+45981453 | None:intergenic |
ACCAATGTTACATGGAGCAA+TGG | 0.574606 | 2_4:+45981516 | None:intergenic |
TCAGAATTCCCATCATAACA+TGG | 0.575057 | 2_4:-45984797 | Msa0330880:CDS |
CCCCAAATCCGATGTGAATG+TGG | 0.579254 | 2_4:-45981452 | Msa0330880:CDS |
CGCAAGCGGGGTTTATAACG+CGG | 0.580141 | 2_4:-45988002 | Msa0330880:five_prime_UTR |
AGTGGATCAACGGAAGGGAG+TGG | 0.580625 | 2_4:-45981769 | Msa0330880:CDS |
GTTCTGTATTTCGTAGGAGT+CGG | 0.580650 | 2_4:-45981942 | Msa0330880:CDS |
CAGAATTCCCATCATAACAT+GGG | 0.581021 | 2_4:-45984796 | Msa0330880:CDS |
GCAAATGAGACCACCAACAA+AGG | 0.582885 | 2_4:-45982273 | Msa0330880:CDS |
GGTTATTGAAGTTCGTGACA+AGG | 0.583121 | 2_4:-45984757 | Msa0330880:CDS |
AAGAACTAAAGTTGTTTCAG+AGG | 0.584895 | 2_4:-45981539 | Msa0330880:CDS |
GTCAGTAAATGCTTCTAAAG+GGG | 0.587217 | 2_4:-45981857 | Msa0330880:CDS |
AGACTTCACTCACCTCAACA+AGG | 0.587867 | 2_4:+45985509 | None:intergenic |
GGTAGGAGTGAAGTTTCTCA+AGG | 0.589146 | 2_4:-45985835 | Msa0330880:CDS |
TTGGTTTAAAGTGGACGAGA+AGG | 0.592908 | 2_4:-45985067 | Msa0330880:CDS |
TCAGGTAGAAAGTGGATCAA+CGG | 0.593031 | 2_4:-45981779 | Msa0330880:CDS |
AAGGGTCTGTTCAAACGCAA+TGG | 0.593233 | 2_4:+45985528 | None:intergenic |
ATTGAAGGCCAAGAGAAGAC+AGG | 0.595022 | 2_4:-45982186 | Msa0330880:CDS |
GGGAATGCATGTTGAAGGGA+AGG | 0.595088 | 2_4:-45986055 | Msa0330880:intron |
AAAACAATCTAATCAAAGAA+GGG | 0.596262 | 2_4:-45987193 | Msa0330880:intron |
GTAGAAAGTGGATCAACGGA+AGG | 0.597270 | 2_4:-45981775 | Msa0330880:CDS |
CCCGGCAAAGAGAGATGTCA+AGG | 0.599917 | 2_4:-45981737 | Msa0330880:CDS |
CAACACCACTGTGGTCAACA+AGG | 0.602995 | 2_4:-45981413 | Msa0330880:CDS |
GAGCTGTGTTCGATATCTGT+CGG | 0.603441 | 2_4:+45981226 | None:intergenic |
GCCTCGACACAGAAATTCAG+AGG | 0.603945 | 2_4:-45982095 | Msa0330880:CDS |
GTGACGTATAAAGGAAGTAA+CGG | 0.604470 | 2_4:+45988226 | None:intergenic |
ATTGAAAGTGGAGAAGGTAA+CGG | 0.608609 | 2_4:+45988135 | None:intergenic |
CGAATGAAAACTGTTAGGAA+AGG | 0.609904 | 2_4:-45981979 | Msa0330880:CDS |
CGTAAATCAAGGAAATCGAA+AGG | 0.610607 | 2_4:-45981649 | Msa0330880:CDS |
ATGAATCATACAGCAGTCCA+AGG | 0.611982 | 2_4:+45986578 | None:intergenic |
AATAATTGGGAAGAGTGAAA+CGG | 0.612270 | 2_4:+45988204 | None:intergenic |
ATGACCTTTCACATAAGGAT+CGG | 0.615098 | 2_4:+45984887 | None:intergenic |
TTAGCCGATCCTTATGTGAA+AGG | 0.615463 | 2_4:-45984891 | Msa0330880:CDS |
TATGTGAAAGGTCATTTGGG+AGG | 0.619001 | 2_4:-45984879 | Msa0330880:CDS |
TCTACCTGAATCTTACCAGT+CGG | 0.620499 | 2_4:+45981793 | None:intergenic |
TAACGGGAATGCATGTTGAA+GGG | 0.621171 | 2_4:-45986059 | Msa0330880:CDS |
TTTATGCCACTAAGTGCTGT+TGG | 0.622596 | 2_4:-45980963 | Msa0330880:three_prime_UTR |
GGTGTTTGGATACATCAGCC+AGG | 0.623254 | 2_4:-45982165 | Msa0330880:CDS |
ACCCTGATATCAGTAATCAA+AGG | 0.627115 | 2_4:+45986308 | None:intergenic |
AAGCGAAGTTCCCCAAATGT+GGG | 0.628739 | 2_4:-45982142 | Msa0330880:CDS |
CCAGTGTGATGATGACCACT+TGG | 0.631960 | 2_4:-45986279 | Msa0330880:intron |
GGAAATGGTTTGGATATGGT+GGG | 0.633766 | 2_4:+45988073 | None:intergenic |
AAAGAGAGATGTCAAGGACA+TGG | 0.634532 | 2_4:-45981731 | Msa0330880:CDS |
ACTTTCTCCAAAATGGCAAG+AGG | 0.641409 | 2_4:-45984823 | Msa0330880:CDS |
TGATATCAGTAATCAAAGGT+GGG | 0.644175 | 2_4:+45986312 | None:intergenic |
TTGTACTTCTCTAAGAACCA+TGG | 0.644582 | 2_4:+45986602 | None:intergenic |
GACTTCACTCACCTCAACAA+GGG | 0.645139 | 2_4:+45985510 | None:intergenic |
GTAGCTACATGCATCAGTGT+CGG | 0.657079 | 2_4:-45981154 | Msa0330880:three_prime_UTR |
GTTTGAACAGACCCTTGTTG+AGG | 0.662889 | 2_4:-45985521 | Msa0330880:intron |
TAGAAAGTGGATCAACGGAA+GGG | 0.663587 | 2_4:-45981774 | Msa0330880:CDS |
ACAGTCATCTGAAAATATGG+AGG | 0.673844 | 2_4:+45985771 | None:intergenic |
CCAAGTGGTCATCATCACAC+TGG | 0.674932 | 2_4:+45986279 | None:intergenic |
ATTGTGAACCTCATTCACAT+CGG | 0.683265 | 2_4:+45981483 | None:intergenic |
AGGCTCCTTGTTGACCACAG+TGG | 0.684496 | 2_4:+45981408 | None:intergenic |
ATTGTGAACCACATTCACAT+CGG | 0.691176 | 2_4:+45981444 | None:intergenic |
CCTCGACACAGAAATTCAGA+GGG | 0.702383 | 2_4:-45982094 | Msa0330880:CDS |
AAATTTGTATCACCAGACCA+AGG | 0.724755 | 2_4:-45985291 | Msa0330880:intron |
ACTGACCTAATGTTATCACG+TGG | 0.727696 | 2_4:+45981874 | None:intergenic |
TGTGCCATCCAACACCACTG+TGG | 0.765001 | 2_4:-45981422 | Msa0330880:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TGCTTTTTTTTTTTTTTTTT+TGG | - | chr2_4:45981506-45981525 | Msa0330880:CDS | 10.0% |
!!! | TTTTTTTTTTTTTTTTGGTT+TGG | - | chr2_4:45981511-45981530 | Msa0330880:CDS | 10.0% |
!!! | TTTTTTGTCTTATTTATAAA+GGG | - | chr2_4:45981763-45981782 | Msa0330880:CDS | 10.0% |
!!! | TTTATATATTTTACATAACT+TGG | - | chr2_4:45983665-45983684 | Msa0330880:intron | 10.0% |
!!! | ATTTAAAGATTTGTTTAATA+AGG | + | chr2_4:45983944-45983963 | None:intergenic | 10.0% |
!!! | TTATATGTTATGTTATATTT+TGG | - | chr2_4:45988077-45988096 | Msa0330880:five_prime_UTR | 10.0% |
!! | TGATATTTAATCAAAAAACA+CGG | + | chr2_4:45981150-45981169 | None:intergenic | 15.0% |
!!! | GTTTTTTGTCTTATTTATAA+AGG | - | chr2_4:45981762-45981781 | Msa0330880:CDS | 15.0% |
!! | TGAACAATTAAAAATATAAC+AGG | + | chr2_4:45983774-45983793 | None:intergenic | 15.0% |
!! | AACAAATTATAGTATATTTC+AGG | - | chr2_4:45984206-45984225 | Msa0330880:CDS | 15.0% |
!! | AAAGCAAATGTATATTAAAA+AGG | + | chr2_4:45984647-45984666 | None:intergenic | 15.0% |
!! | TTTGTTAGTATAATGTTTAT+AGG | + | chr2_4:45985683-45985702 | None:intergenic | 15.0% |
!!! | AAGTTTATTTTAGATATCAT+CGG | - | chr2_4:45985708-45985727 | Msa0330880:intron | 15.0% |
!! | AAAAATAAAATATATGTAGC+TGG | - | chr2_4:45985749-45985768 | Msa0330880:CDS | 15.0% |
!! | ATTTATTATTATGGTCAATA+TGG | + | chr2_4:45985817-45985836 | None:intergenic | 15.0% |
!! | TATTCACAATGAAAATAAAA+TGG | - | chr2_4:45986615-45986634 | Msa0330880:CDS | 15.0% |
!! | AAATTTCAAATATGAATTGT+CGG | - | chr2_4:45988005-45988024 | Msa0330880:five_prime_UTR | 15.0% |
!!! | ATAGATTGAGTTGAATAATT+GGG | + | chr2_4:45980933-45980952 | None:intergenic | 20.0% |
!!! | AATAGATTGAGTTGAATAAT+TGG | + | chr2_4:45980934-45980953 | None:intergenic | 20.0% |
!! | GAATAGTAAAATATTGAAAG+TGG | + | chr2_4:45981001-45981020 | None:intergenic | 20.0% |
!!! | TTCTTCAGTTTTTGTTATAA+TGG | - | chr2_4:45981250-45981269 | Msa0330880:three_prime_UTR | 20.0% |
!! | AAAACAATCTAATCAAAGAA+GGG | - | chr2_4:45981928-45981947 | Msa0330880:CDS | 20.0% |
!!! | ATAAGGTTTCTATTGATTAA+AGG | - | chr2_4:45982072-45982091 | Msa0330880:CDS | 20.0% |
!! | AATATATGAAAGGAACAAAA+AGG | + | chr2_4:45982661-45982680 | None:intergenic | 20.0% |
!! | TTTGTTCCTTTCATATATTA+TGG | - | chr2_4:45982662-45982681 | Msa0330880:intron | 20.0% |
!! | AAGAAACCATAATATATGAA+AGG | + | chr2_4:45982671-45982690 | None:intergenic | 20.0% |
!!! | AAATATTCTTTTGCTGATTA+AGG | - | chr2_4:45983143-45983162 | Msa0330880:intron | 20.0% |
!!! | ATTTTTTTTTCTATAGGTCT+TGG | - | chr2_4:45983265-45983284 | Msa0330880:intron | 20.0% |
!!! | TCAATGACTAATGATTTTAA+CGG | + | chr2_4:45983888-45983907 | None:intergenic | 20.0% |
!! | CTCTATAACAATAAGATTTA+TGG | + | chr2_4:45984032-45984051 | None:intergenic | 20.0% |
!!! | AATATATTTTCACTAGATGT+CGG | - | chr2_4:45984591-45984610 | Msa0330880:intron | 20.0% |
!! | ATATACAAGTTTCACATTAT+TGG | + | chr2_4:45985086-45985105 | None:intergenic | 20.0% |
!! | AATACAATATAGAAATAGGA+GGG | + | chr2_4:45985186-45985205 | None:intergenic | 20.0% |
!! | ATATTATAACTTCTAGATTC+AGG | - | chr2_4:45985341-45985360 | Msa0330880:intron | 20.0% |
!!! | TGATATTCTAAGATATTGTT+CGG | + | chr2_4:45986149-45986168 | None:intergenic | 20.0% |
!! | TCAAAATCAAAAGAAAAGAA+AGG | - | chr2_4:45986242-45986261 | Msa0330880:intron | 20.0% |
!!! | TCTTTTTGTTTCTGAAAATT+GGG | + | chr2_4:45986303-45986322 | None:intergenic | 20.0% |
!!! | TTCTTTTTGTTTCTGAAAAT+TGG | + | chr2_4:45986304-45986323 | None:intergenic | 20.0% |
!!! | CAATTTTGAATTATGTTTAC+AGG | - | chr2_4:45986766-45986785 | Msa0330880:intron | 20.0% |
!! | TATTACATGTGTTTATATGT+CGG | + | chr2_4:45987921-45987940 | None:intergenic | 20.0% |
! | TAAAATATTGAAAGTGGAGA+AGG | + | chr2_4:45980995-45981014 | None:intergenic | 25.0% |
! | AAGATTAATTGAAGTGGAAA+TGG | + | chr2_4:45981066-45981085 | None:intergenic | 25.0% |
! | AAGTCAAAGATTAATTGAAG+TGG | + | chr2_4:45981072-45981091 | None:intergenic | 25.0% |
! | ACTCATTAAATTTCACTTCT+TGG | - | chr2_4:45981224-45981243 | Msa0330880:three_prime_UTR | 25.0% |
! | CTCATTAAATTTCACTTCTT+GGG | - | chr2_4:45981225-45981244 | Msa0330880:three_prime_UTR | 25.0% |
! | ATGATGCAAAATTGAAACTT+CGG | + | chr2_4:45981282-45981301 | None:intergenic | 25.0% |
!!! | TATGCTATGCTTTTTGATTT+TGG | - | chr2_4:45981453-45981472 | Msa0330880:CDS | 25.0% |
! | TTATAAAGGGTAAAGAGAAA+AGG | - | chr2_4:45981776-45981795 | Msa0330880:CDS | 25.0% |
! | TATAAAGGGTAAAGAGAAAA+GGG | - | chr2_4:45981777-45981796 | Msa0330880:CDS | 25.0% |
!!! | TTTGTTCTTTTTCATTGGAA+AGG | - | chr2_4:45981853-45981872 | Msa0330880:CDS | 25.0% |
! | GAAAACAATCTAATCAAAGA+AGG | - | chr2_4:45981927-45981946 | Msa0330880:CDS | 25.0% |
! | ATAAAACACATGAAAAGGAA+GGG | + | chr2_4:45982043-45982062 | None:intergenic | 25.0% |
! | AATAAAACACATGAAAAGGA+AGG | + | chr2_4:45982044-45982063 | None:intergenic | 25.0% |
! | AAGCAATAAAACACATGAAA+AGG | + | chr2_4:45982048-45982067 | None:intergenic | 25.0% |
!!! | TGTTTTATTGCTTGTCAATA+AGG | - | chr2_4:45982055-45982074 | Msa0330880:CDS | 25.0% |
!! | ATTTACTGATATAACTTGCA+TGG | - | chr2_4:45982365-45982384 | Msa0330880:intron | 25.0% |
! | AAGTACCTAAAATTCAAGAA+AGG | + | chr2_4:45982397-45982416 | None:intergenic | 25.0% |
! | GAAAATGTTTGAACTTCATA+TGG | + | chr2_4:45982607-45982626 | None:intergenic | 25.0% |
! | TGTGAAACTAAGAAAAAGAT+TGG | - | chr2_4:45983012-45983031 | Msa0330880:intron | 25.0% |
! | GTGAAACTAAGAAAAAGATT+GGG | - | chr2_4:45983013-45983032 | Msa0330880:intron | 25.0% |
!!! | TCAAACCTATTTTTACACAT+GGG | - | chr2_4:45983372-45983391 | Msa0330880:intron | 25.0% |
! | AAATTACTTAATTCGAGAGA+AGG | + | chr2_4:45983531-45983550 | None:intergenic | 25.0% |
! | AATCATTAGTCATTGAACAA+AGG | - | chr2_4:45983892-45983911 | Msa0330880:intron | 25.0% |
! | TTTAATAAGGATTCTAGTGA+GGG | + | chr2_4:45983931-45983950 | None:intergenic | 25.0% |
! | AAAAATATCATCACAGAGAA+AGG | + | chr2_4:45984155-45984174 | None:intergenic | 25.0% |
!!! | TGGTTTTTAGTATAGTTCAA+CGG | - | chr2_4:45984451-45984470 | Msa0330880:intron | 25.0% |
!!! | ATGTTGTTTTACACTAACAT+TGG | + | chr2_4:45984481-45984500 | None:intergenic | 25.0% |
!! | TGTGAACATCAATGATTTTA+GGG | - | chr2_4:45984914-45984933 | Msa0330880:intron | 25.0% |
!! | AATAACAGTTCTTGATGATA+AGG | - | chr2_4:45985001-45985020 | Msa0330880:CDS | 25.0% |
! | GAATGAATATAATTGAGGTA+AGG | + | chr2_4:45985050-45985069 | None:intergenic | 25.0% |
! | GAATACAATATAGAAATAGG+AGG | + | chr2_4:45985187-45985206 | None:intergenic | 25.0% |
! | GGAGAATACAATATAGAAAT+AGG | + | chr2_4:45985190-45985209 | None:intergenic | 25.0% |
! | TATTATGTGAAAGTTGTAGA+TGG | + | chr2_4:45985238-45985257 | None:intergenic | 25.0% |
!!! | TTTTATTGGTTGGGAATTAA+GGG | + | chr2_4:45985412-45985431 | None:intergenic | 25.0% |
!!! | TTGTGTTTGTTTTATTGGTT+GGG | + | chr2_4:45985421-45985440 | None:intergenic | 25.0% |
!!! | GATTGTTGTGTTTGTTTTAT+TGG | + | chr2_4:45985426-45985445 | None:intergenic | 25.0% |
!! | AAAAACAAAATCACAGCTTT+TGG | + | chr2_4:45985496-45985515 | None:intergenic | 25.0% |
! | AAACAATGTACCTGTTTAAT+TGG | + | chr2_4:45986185-45986204 | None:intergenic | 25.0% |
! | AACAACAGATCAAATAACAA+AGG | + | chr2_4:45986734-45986753 | None:intergenic | 25.0% |
!! | CTTCAATATCTATTGTTTCT+TGG | + | chr2_4:45986811-45986830 | None:intergenic | 25.0% |
! | TATGAGCCAATAAAAATTGA+AGG | - | chr2_4:45986920-45986939 | Msa0330880:CDS | 25.0% |
! | TTTATCTTCAGCATTATCAT+CGG | + | chr2_4:45987119-45987138 | None:intergenic | 25.0% |
!!! | TTTTTTCATTAGACCTTTCA+GGG | + | chr2_4:45987753-45987772 | None:intergenic | 25.0% |
!!! | ATTTTTTCATTAGACCTTTC+AGG | + | chr2_4:45987754-45987773 | None:intergenic | 25.0% |
! | ACATGATAAAGAAGAAATAG+TGG | - | chr2_4:45987789-45987808 | Msa0330880:CDS | 25.0% |
! | ATTACATGTGTTTATATGTC+GGG | + | chr2_4:45987920-45987939 | None:intergenic | 25.0% |
! | CATGTAATAATCTGAGAAAA+TGG | - | chr2_4:45987932-45987951 | Msa0330880:five_prime_UTR | 25.0% |
AATAATTGGGAAGAGTGAAA+CGG | + | chr2_4:45980920-45980939 | None:intergenic | 30.0% | |
!! | GTGATAAAGTGTTGCAATTA+GGG | + | chr2_4:45980967-45980986 | None:intergenic | 30.0% |
TAATTGAAGTGGAAATGGTT+TGG | + | chr2_4:45981061-45981080 | None:intergenic | 30.0% | |
!!! | GAATCGTTTTGATTTCTCTA+TGG | - | chr2_4:45981306-45981325 | Msa0330880:CDS | 30.0% |
!!! | TCATGCTGCTTTTTATTTTG+TGG | - | chr2_4:45981352-45981371 | Msa0330880:CDS | 30.0% |
!! | GGTTTTTGCTTTTGAACTTT+TGG | - | chr2_4:45981414-45981433 | Msa0330880:CDS | 30.0% |
!! | TTTGGTTTGGATTCATTAGT+TGG | - | chr2_4:45981524-45981543 | Msa0330880:CDS | 30.0% |
!! | ATTCATTCGAGTTCGATTTT+TGG | + | chr2_4:45981652-45981671 | None:intergenic | 30.0% |
!!! | ATTAGTTGGTGGTTTTGAAA+AGG | - | chr2_4:45981670-45981689 | Msa0330880:CDS | 30.0% |
TAGCCAAAAAAGGAAAGAAA+AGG | - | chr2_4:45981803-45981822 | Msa0330880:CDS | 30.0% | |
AGCCAAAAAAGGAAAGAAAA+GGG | - | chr2_4:45981804-45981823 | Msa0330880:CDS | 30.0% | |
! | TACCCTTTTCTTTCCTTTTT+TGG | + | chr2_4:45981809-45981828 | None:intergenic | 30.0% |
!! | CTGACTTTGTTCTTTTTCAT+TGG | - | chr2_4:45981848-45981867 | Msa0330880:CDS | 30.0% |
TTCATGAACGTTATGTTACA+AGG | - | chr2_4:45981876-45981895 | Msa0330880:CDS | 30.0% | |
AAATAGAATCTGAACTTGAG+TGG | - | chr2_4:45981987-45982006 | Msa0330880:CDS | 30.0% | |
TAAAACACATGAAAAGGAAG+GGG | + | chr2_4:45982042-45982061 | None:intergenic | 30.0% | |
TTAGAACATGTTTGCATTCA+CGG | + | chr2_4:45982239-45982258 | None:intergenic | 30.0% | |
ATCATTGTCTTGAGAGTTAT+TGG | - | chr2_4:45982303-45982322 | Msa0330880:CDS | 30.0% | |
TCATTGTCTTGAGAGTTATT+GGG | - | chr2_4:45982304-45982323 | Msa0330880:CDS | 30.0% | |
! | GATGACCTTTCTTGAATTTT+AGG | - | chr2_4:45982389-45982408 | Msa0330880:intron | 30.0% |
!! | TTTCTGATTCTGAAACAGTT+CGG | - | chr2_4:45982415-45982434 | Msa0330880:intron | 30.0% |
AAACATATGGCCTATATGTA+TGG | - | chr2_4:45982458-45982477 | Msa0330880:intron | 30.0% | |
CTGTCAGATAAATAACTGAA+AGG | + | chr2_4:45982572-45982591 | None:intergenic | 30.0% | |
TGAAAGGAACAAAAAGGAAA+AGG | + | chr2_4:45982655-45982674 | None:intergenic | 30.0% | |
CTGATCATACACAAAATCAA+AGG | + | chr2_4:45982722-45982741 | None:intergenic | 30.0% | |
TGATATCAGTAATCAAAGGT+GGG | + | chr2_4:45982812-45982831 | None:intergenic | 30.0% | |
ACCTTTGATTACTGATATCA+GGG | - | chr2_4:45982812-45982831 | Msa0330880:intron | 30.0% | |
TAAGAATGTTACATACCAAG+TGG | + | chr2_4:45982860-45982879 | None:intergenic | 30.0% | |
ATGTAACATTCTTAAGCAGA+AGG | - | chr2_4:45982866-45982885 | Msa0330880:intron | 30.0% | |
! | GTTAGGAATGAATTTTCTCA+CGG | - | chr2_4:45982964-45982983 | Msa0330880:intron | 30.0% |
! | TTAGGAATGAATTTTCTCAC+GGG | - | chr2_4:45982965-45982984 | Msa0330880:intron | 30.0% |
!! | ATTCTTTTGCTGATTAAGGT+CGG | - | chr2_4:45983147-45983166 | Msa0330880:intron | 30.0% |
!!! | TTTTTTCTATAGGTCTTGGT+AGG | - | chr2_4:45983269-45983288 | Msa0330880:intron | 30.0% |
TTGACAGTCATCTGAAAATA+TGG | + | chr2_4:45983356-45983375 | None:intergenic | 30.0% | |
!!! | GTCAAACCTATTTTTACACA+TGG | - | chr2_4:45983371-45983390 | Msa0330880:intron | 30.0% |
CATGACAAATATCTTTACCT+TGG | + | chr2_4:45983850-45983869 | None:intergenic | 30.0% | |
GTTTAATAAGGATTCTAGTG+AGG | + | chr2_4:45983932-45983951 | None:intergenic | 30.0% | |
GTAACAATTATGTCAAGCAT+AGG | + | chr2_4:45983982-45984001 | None:intergenic | 30.0% | |
ATCTTATTGTTATAGAGCCT+TGG | - | chr2_4:45984035-45984054 | Msa0330880:intron | 30.0% | |
TGCAAAAATCGAAATTGTTG+AGG | - | chr2_4:45984090-45984109 | Msa0330880:intron | 30.0% | |
TAGTAACCATTTAGATCTGA+TGG | + | chr2_4:45984130-45984149 | None:intergenic | 30.0% | |
AGAAAACACTTTCTCCAAAA+TGG | - | chr2_4:45984291-45984310 | Msa0330880:intron | 30.0% | |
TTACAATCCCATGTTATGAT+GGG | + | chr2_4:45984335-45984354 | None:intergenic | 30.0% | |
ATTTCTATGATGACATCCTT+GGG | - | chr2_4:45984390-45984409 | Msa0330880:intron | 30.0% | |
ACTATACTAAAAACCACATG+AGG | + | chr2_4:45984447-45984466 | None:intergenic | 30.0% | |
GAAACATGATAGTTTCTCAT+TGG | + | chr2_4:45984515-45984534 | None:intergenic | 30.0% | |
TTAAACTACCTGTACAATAG+TGG | - | chr2_4:45984553-45984572 | Msa0330880:intron | 30.0% | |
TAAACTACCTGTACAATAGT+GGG | - | chr2_4:45984554-45984573 | Msa0330880:intron | 30.0% | |
CTTCATGATAATAGCAGAAA+AGG | + | chr2_4:45984720-45984739 | None:intergenic | 30.0% | |
CTTCCAATTATTCAATCACT+GGG | - | chr2_4:45984848-45984867 | Msa0330880:CDS | 30.0% | |
AAACCCAGTGATTGAATAAT+TGG | + | chr2_4:45984854-45984873 | None:intergenic | 30.0% | |
! | CTGTGAACATCAATGATTTT+AGG | - | chr2_4:45984913-45984932 | Msa0330880:intron | 30.0% |
!! | AACATCAATGATTTTAGGGA+CGG | - | chr2_4:45984918-45984937 | Msa0330880:intron | 30.0% |
CCACTACAGAAAGTAAAAAT+GGG | - | chr2_4:45984963-45984982 | Msa0330880:intron | 30.0% | |
CACTACAGAAAGTAAAAATG+GGG | - | chr2_4:45984964-45984983 | Msa0330880:intron | 30.0% | |
! | AGTTCTTGATGATAAGGAAA+AGG | - | chr2_4:45985007-45985026 | Msa0330880:CDS | 30.0% |
AATATAATTGAGGTAAGGTG+GGG | + | chr2_4:45985045-45985064 | None:intergenic | 30.0% | |
GAATATAATTGAGGTAAGGT+GGG | + | chr2_4:45985046-45985065 | None:intergenic | 30.0% | |
TGAATATAATTGAGGTAAGG+TGG | + | chr2_4:45985047-45985066 | None:intergenic | 30.0% | |
CATTATTGGATAATATTGCG+AGG | + | chr2_4:45985072-45985091 | None:intergenic | 30.0% | |
ATGTTGAGGAATCAACATAT+AGG | + | chr2_4:45985125-45985144 | None:intergenic | 30.0% | |
! | ATCTGGAAGTGTATAGAAAA+GGG | + | chr2_4:45985211-45985230 | None:intergenic | 30.0% |
! | AATCTGGAAGTGTATAGAAA+AGG | + | chr2_4:45985212-45985231 | None:intergenic | 30.0% |
AAGTTGTAGATGGTATAATC+TGG | + | chr2_4:45985228-45985247 | None:intergenic | 30.0% | |
TGAGTGTTAAAATGTGTGTT+CGG | + | chr2_4:45985382-45985401 | None:intergenic | 30.0% | |
!! | GTTTTATTGGTTGGGAATTA+AGG | + | chr2_4:45985413-45985432 | None:intergenic | 30.0% |
!!! | GTTGTGTTTGTTTTATTGGT+TGG | + | chr2_4:45985422-45985441 | None:intergenic | 30.0% |
ATAAAGATCTCCAAAACGAT+TGG | + | chr2_4:45985572-45985591 | None:intergenic | 30.0% | |
GGAGATCTTTATGTATTAAC+AGG | - | chr2_4:45985580-45985599 | Msa0330880:intron | 30.0% | |
!! | CAATGCAACAATGTTTTTGA+AGG | + | chr2_4:45985628-45985647 | None:intergenic | 30.0% |
GTCAATTTCATTCTTGACAA+CGG | + | chr2_4:45985940-45985959 | None:intergenic | 30.0% | |
GAATTAACACAAGTCTTACT+TGG | + | chr2_4:45986023-45986042 | None:intergenic | 30.0% | |
GAAAAGAAAGGAGAATAAAG+AGG | - | chr2_4:45986254-45986273 | Msa0330880:intron | 30.0% | |
ATCTGGAAAATCTCCAAAAT+TGG | - | chr2_4:45986889-45986908 | Msa0330880:intron | 30.0% | |
! | TCATAGTTATCTGCCAATTT+TGG | + | chr2_4:45986905-45986924 | None:intergenic | 30.0% |
!! | TCTTGGCCTTCAATTTTTAT+TGG | + | chr2_4:45986929-45986948 | None:intergenic | 30.0% |
TTATCTTCAGCATTATCATC+GGG | + | chr2_4:45987118-45987137 | None:intergenic | 30.0% | |
AACATCGAATGAAAACTGTT+AGG | - | chr2_4:45987137-45987156 | Msa0330880:intron | 30.0% | |
ATGTTCTTTCTCGTAAATCA+AGG | - | chr2_4:45987461-45987480 | Msa0330880:intron | 30.0% | |
!!! | TTTAGTTCTTGCATCTTTTG+GGG | + | chr2_4:45987572-45987591 | None:intergenic | 30.0% |
!!! | CTTTAGTTCTTGCATCTTTT+GGG | + | chr2_4:45987573-45987592 | None:intergenic | 30.0% |
!!! | ACTTTAGTTCTTGCATCTTT+TGG | + | chr2_4:45987574-45987593 | None:intergenic | 30.0% |
! | AAGAACTAAAGTTGTTTCAG+AGG | - | chr2_4:45987582-45987601 | Msa0330880:intron | 30.0% |
! | TTTTTCATTAGACCTTTCAG+GGG | + | chr2_4:45987752-45987771 | None:intergenic | 30.0% |
AAGAAATAGTGGCAGATAAA+AGG | - | chr2_4:45987800-45987819 | Msa0330880:CDS | 30.0% | |
AGAAATAGTGGCAGATAAAA+GGG | - | chr2_4:45987801-45987820 | Msa0330880:CDS | 30.0% | |
!! | TTTTGGTGTAAAGTTGTGAT+AGG | - | chr2_4:45988116-45988135 | Msa0330880:five_prime_UTR | 30.0% |
TGACGTATAAAGGAAGTAAC+GGG | + | chr2_4:45980897-45980916 | None:intergenic | 35.0% | |
GTGACGTATAAAGGAAGTAA+CGG | + | chr2_4:45980898-45980917 | None:intergenic | 35.0% | |
!! | GGTGATAAAGTGTTGCAATT+AGG | + | chr2_4:45980968-45980987 | None:intergenic | 35.0% |
ATTGAAAGTGGAGAAGGTAA+CGG | + | chr2_4:45980989-45981008 | None:intergenic | 35.0% | |
! | AAGTGGAAATGGTTTGGATA+TGG | + | chr2_4:45981055-45981074 | None:intergenic | 35.0% |
! | GTTTCAATTTTGCATCATGC+TGG | - | chr2_4:45981284-45981303 | Msa0330880:exon | 35.0% |
! | GGCTTTGATCTATCTTTATC+TGG | - | chr2_4:45981373-45981392 | Msa0330880:CDS | 35.0% |
TGATCTATCTTTATCTGGTG+AGG | - | chr2_4:45981378-45981397 | Msa0330880:CDS | 35.0% | |
!! | ATTCGAGTTCGATTTTTGGA+TGG | + | chr2_4:45981648-45981667 | None:intergenic | 35.0% |
TCGAACTCGAATGAATTAGT+TGG | - | chr2_4:45981656-45981675 | Msa0330880:CDS | 35.0% | |
AACTCGAATGAATTAGTTGG+TGG | - | chr2_4:45981659-45981678 | Msa0330880:CDS | 35.0% | |
GAGTACTTATTCTGAGTGAT+TGG | - | chr2_4:45981705-45981724 | Msa0330880:CDS | 35.0% | |
CTTATTCTGAGTGATTGGAT+TGG | - | chr2_4:45981710-45981729 | Msa0330880:CDS | 35.0% | |
AAAAGGGTTGTAGCCAAAAA+AGG | - | chr2_4:45981793-45981812 | Msa0330880:CDS | 35.0% | |
AACGTTATGTTACAAGGCTA+AGG | - | chr2_4:45981882-45981901 | Msa0330880:CDS | 35.0% | |
! | CAGTGAGTTTTGCAAAATCA+CGG | - | chr2_4:45982127-45982146 | Msa0330880:CDS | 35.0% |
GTGAATGCAAACATGTTCTA+AGG | - | chr2_4:45982238-45982257 | Msa0330880:CDS | 35.0% | |
CATTGTCTTGAGAGTTATTG+GGG | - | chr2_4:45982305-45982324 | Msa0330880:CDS | 35.0% | |
ACCATGCAGTTGAAAACATA+TGG | - | chr2_4:45982445-45982464 | Msa0330880:intron | 35.0% | |
GCAATCTGTTCCATACATAT+AGG | + | chr2_4:45982471-45982490 | None:intergenic | 35.0% | |
! | TTTTACTCCCTATCATACCA+TGG | - | chr2_4:45982502-45982521 | Msa0330880:intron | 35.0% |
CTAAGAACCATGGTATGATA+GGG | + | chr2_4:45982512-45982531 | None:intergenic | 35.0% | |
TCTAAGAACCATGGTATGAT+AGG | + | chr2_4:45982513-45982532 | None:intergenic | 35.0% | |
! | TTGTACTTCTCTAAGAACCA+TGG | + | chr2_4:45982522-45982541 | None:intergenic | 35.0% |
! | TCTTAGAGAAGTACAAACCT+TGG | - | chr2_4:45982526-45982545 | Msa0330880:intron | 35.0% |
GGAACAAAAAGGAAAAGGAA+TGG | + | chr2_4:45982650-45982669 | None:intergenic | 35.0% | |
TTCTGTTCAGCACCTATATT+TGG | - | chr2_4:45982779-45982798 | Msa0330880:intron | 35.0% | |
TCTGTTCAGCACCTATATTT+GGG | - | chr2_4:45982780-45982799 | Msa0330880:intron | 35.0% | |
CTGATATCAGTAATCAAAGG+TGG | + | chr2_4:45982813-45982832 | None:intergenic | 35.0% | |
CACCTTTGATTACTGATATC+AGG | - | chr2_4:45982811-45982830 | Msa0330880:intron | 35.0% | |
ACCCTGATATCAGTAATCAA+AGG | + | chr2_4:45982816-45982835 | None:intergenic | 35.0% | |
CTAAGAAAAAGATTGGGCTT+TGG | - | chr2_4:45983019-45983038 | Msa0330880:intron | 35.0% | |
GTCAACAAAGCTGCATATAA+CGG | - | chr2_4:45983045-45983064 | Msa0330880:intron | 35.0% | |
TCAACAAAGCTGCATATAAC+GGG | - | chr2_4:45983046-45983065 | Msa0330880:intron | 35.0% | |
CATATACAACAAATGAGTCG+AGG | + | chr2_4:45983116-45983135 | None:intergenic | 35.0% | |
ACAGTCATCTGAAAATATGG+AGG | + | chr2_4:45983353-45983372 | None:intergenic | 35.0% | |
TCAAGCCCATGTGTAAAAAT+AGG | + | chr2_4:45983380-45983399 | None:intergenic | 35.0% | |
!! | TTGTGACTTTTCGTTGTTTC+AGG | - | chr2_4:45983558-45983577 | Msa0330880:intron | 35.0% |
ACATCAACAACCAGCATATT+GGG | + | chr2_4:45983806-45983825 | None:intergenic | 35.0% | |
AACATCAACAACCAGCATAT+TGG | + | chr2_4:45983807-45983826 | None:intergenic | 35.0% | |
AAATTTGTATCACCAGACCA+AGG | - | chr2_4:45983830-45983849 | Msa0330880:intron | 35.0% | |
CAAATATCTTTACCTTGGTC+TGG | + | chr2_4:45983845-45983864 | None:intergenic | 35.0% | |
TATAGAGCCTTGGTTTAAAG+TGG | - | chr2_4:45984045-45984064 | Msa0330880:intron | 35.0% | |
! | TCGATTTTTGCATAAGCAAC+AGG | + | chr2_4:45984082-45984101 | None:intergenic | 35.0% |
ATGAAGCCATCAGATCTAAA+TGG | - | chr2_4:45984121-45984140 | Msa0330880:CDS | 35.0% | |
ATGACCTTTCACATAAGGAT+CGG | + | chr2_4:45984237-45984256 | None:intergenic | 35.0% | |
TCCTTATGTGAAAGGTCATT+TGG | - | chr2_4:45984238-45984257 | Msa0330880:intron | 35.0% | |
CCTTATGTGAAAGGTCATTT+GGG | - | chr2_4:45984239-45984258 | Msa0330880:intron | 35.0% | |
ATTTGGGAGGATATAGATTC+AGG | - | chr2_4:45984255-45984274 | Msa0330880:intron | 35.0% | |
TCAGAATTCCCATCATAACA+TGG | - | chr2_4:45984324-45984343 | Msa0330880:intron | 35.0% | |
CAGAATTCCCATCATAACAT+GGG | - | chr2_4:45984325-45984344 | Msa0330880:intron | 35.0% | |
GTTACAATCCCATGTTATGA+TGG | + | chr2_4:45984336-45984355 | None:intergenic | 35.0% | |
ATGGGATTGTAACAATGTTC+TGG | - | chr2_4:45984343-45984362 | Msa0330880:intron | 35.0% | |
CAAGGATGTCATCATAGAAA+TGG | + | chr2_4:45984391-45984410 | None:intergenic | 35.0% | |
CATTTCTATGATGACATCCT+TGG | - | chr2_4:45984389-45984408 | Msa0330880:intron | 35.0% | |
AAGTTCAAAGTTCAGACAGA+CGG | + | chr2_4:45984422-45984441 | None:intergenic | 35.0% | |
! | ACTTTGAACTTTTCCTCATG+TGG | - | chr2_4:45984431-45984450 | Msa0330880:intron | 35.0% |
ATGATAATAGCAGAAAAGGC+AGG | + | chr2_4:45984716-45984735 | None:intergenic | 35.0% | |
! | CAAACAAAGTGCTAGAGAAA+AGG | + | chr2_4:45984780-45984799 | None:intergenic | 35.0% |
! | CTTTTCTCTAGCACTTTGTT+TGG | - | chr2_4:45984778-45984797 | Msa0330880:CDS | 35.0% |
CCAGTGATTGAATAATTGGA+AGG | + | chr2_4:45984850-45984869 | None:intergenic | 35.0% | |
CCTTCCAATTATTCAATCAC+TGG | - | chr2_4:45984847-45984866 | Msa0330880:CDS | 35.0% | |
!! | ACATCAATGATTTTAGGGAC+GGG | - | chr2_4:45984919-45984938 | Msa0330880:intron | 35.0% |
ACGGGCAAAAATATGATAAG+TGG | - | chr2_4:45984937-45984956 | Msa0330880:intron | 35.0% | |
CGGGCAAAAATATGATAAGT+GGG | - | chr2_4:45984938-45984957 | Msa0330880:intron | 35.0% | |
GCCACTACAGAAAGTAAAAA+TGG | - | chr2_4:45984962-45984981 | Msa0330880:intron | 35.0% | |
!! | CCCATTTTTACTTTCTGTAG+TGG | + | chr2_4:45984966-45984985 | None:intergenic | 35.0% |
TACAGAAAGTAAAAATGGGG+AGG | - | chr2_4:45984967-45984986 | Msa0330880:intron | 35.0% | |
ATATAATTGAGGTAAGGTGG+GGG | + | chr2_4:45985044-45985063 | None:intergenic | 35.0% | |
GCGAGGAATGAATATAATTG+AGG | + | chr2_4:45985055-45985074 | None:intergenic | 35.0% | |
! | GAGGCACTATTATACTTATG+TGG | + | chr2_4:45985156-45985175 | None:intergenic | 35.0% |
ATAGAAATAGGAGGGATTGT+AGG | + | chr2_4:45985178-45985197 | None:intergenic | 35.0% | |
GAGTGTTAAAATGTGTGTTC+GGG | + | chr2_4:45985381-45985400 | None:intergenic | 35.0% | |
!! | TGGCTCTTTTTCATTTTGTG+TGG | + | chr2_4:45985552-45985571 | None:intergenic | 35.0% |
! | TGAAAAAGAGCCAATCGTTT+TGG | - | chr2_4:45985559-45985578 | Msa0330880:intron | 35.0% |
! | TGAAGTCTGCACATTTTTGT+AGG | + | chr2_4:45985779-45985798 | None:intergenic | 35.0% |
TTCTTGACAACGGAATGAAT+TGG | + | chr2_4:45985930-45985949 | None:intergenic | 35.0% | |
TTTCCAACACAAGTCTTACT+TGG | + | chr2_4:45985994-45986013 | None:intergenic | 35.0% | |
TCTTCAGAAGCCAATTAAAC+AGG | - | chr2_4:45986172-45986191 | Msa0330880:intron | 35.0% | |
GGAGAATAAAGAGGAACAAA+AGG | - | chr2_4:45986263-45986282 | Msa0330880:intron | 35.0% | |
AATAACAAAGGAGCAACTTG+TGG | + | chr2_4:45986722-45986741 | None:intergenic | 35.0% | |
! | TGGAGATTTTCCAGATGAAA+CGG | + | chr2_4:45986885-45986904 | None:intergenic | 35.0% |
TTACAGCCAGATATATCGTT+AGG | + | chr2_4:45987055-45987074 | None:intergenic | 35.0% | |
CGAATGAAAACTGTTAGGAA+AGG | - | chr2_4:45987142-45987161 | Msa0330880:intron | 35.0% | |
! | AAATCGGTTCTGTATTTCGT+AGG | - | chr2_4:45987173-45987192 | Msa0330880:intron | 35.0% |
AGGTCAGTAAATGCTTCTAA+AGG | - | chr2_4:45987262-45987281 | Msa0330880:intron | 35.0% | |
GGTCAGTAAATGCTTCTAAA+GGG | - | chr2_4:45987263-45987282 | Msa0330880:intron | 35.0% | |
! | GTCAGTAAATGCTTCTAAAG+GGG | - | chr2_4:45987264-45987283 | Msa0330880:intron | 35.0% |
GTTATGGATGATAACATTGC+TGG | - | chr2_4:45987301-45987320 | Msa0330880:intron | 35.0% | |
CGTAAATCAAGGAAATCGAA+AGG | - | chr2_4:45987472-45987491 | Msa0330880:intron | 35.0% | |
AGATTCATCACTAGATGAGT+CGG | + | chr2_4:45987536-45987555 | None:intergenic | 35.0% | |
ATTGTGAACCTCATTCACAT+CGG | + | chr2_4:45987641-45987660 | None:intergenic | 35.0% | |
ATTGTGAACCACATTCACAT+CGG | + | chr2_4:45987680-45987699 | None:intergenic | 35.0% | |
!! | GTCACATGTAGAGTACTTTT+TGG | - | chr2_4:45988099-45988118 | Msa0330880:five_prime_UTR | 35.0% |
AGTGAAACGGTGACGTATAA+AGG | + | chr2_4:45980907-45980926 | None:intergenic | 40.0% | |
! | GGAAATGGTTTGGATATGGT+GGG | + | chr2_4:45981051-45981070 | None:intergenic | 40.0% |
! | TGGAAATGGTTTGGATATGG+TGG | + | chr2_4:45981052-45981071 | None:intergenic | 40.0% |
!! | TTCATTCCCTTTTTCGCAAG+CGG | - | chr2_4:45981105-45981124 | Msa0330880:three_prime_UTR | 40.0% |
CTTTATCTGGTGAGGATTCA+TGG | - | chr2_4:45981386-45981405 | Msa0330880:CDS | 40.0% | |
! | TGGTGAGGATTCATGGTTTT+TGG | - | chr2_4:45981393-45981412 | Msa0330880:CDS | 40.0% |
GGTTTGGATTCATTAGTTGG+TGG | - | chr2_4:45981527-45981546 | Msa0330880:CDS | 40.0% | |
TGTTAACCCTCCAATTCTGA+GGG | - | chr2_4:45981560-45981579 | Msa0330880:CDS | 40.0% | |
! | GCCATATGTTTTCAACTGCA+TGG | + | chr2_4:45982449-45982468 | None:intergenic | 40.0% |
ATGAATCATACAGCAGTCCA+AGG | + | chr2_4:45982546-45982565 | None:intergenic | 40.0% | |
GTGGGTTTCTTCCCAAATAT+AGG | + | chr2_4:45982794-45982813 | None:intergenic | 40.0% | |
! | TTTTACGCTGTGATCAATGC+AGG | - | chr2_4:45982934-45982953 | Msa0330880:intron | 40.0% |
TCAATGCAGGTTCTTGAGTT+AGG | - | chr2_4:45982947-45982966 | Msa0330880:intron | 40.0% | |
! | ATAACGGGAATGCATGTTGA+AGG | - | chr2_4:45983061-45983080 | Msa0330880:intron | 40.0% |
TAACGGGAATGCATGTTGAA+GGG | - | chr2_4:45983062-45983081 | Msa0330880:intron | 40.0% | |
GAGTGAAGTTTCTCAAGGAA+TGG | - | chr2_4:45983291-45983310 | Msa0330880:intron | 40.0% | |
ACACGTATACGACCAAGAAA+AGG | + | chr2_4:45983317-45983336 | None:intergenic | 40.0% | |
TCGTATACGTGTATGCTTTG+TGG | - | chr2_4:45983325-45983344 | Msa0330880:intron | 40.0% | |
AAATTTGCAGCCCAATATGC+TGG | - | chr2_4:45983793-45983812 | Msa0330880:intron | 40.0% | |
AGGATTCTAGTGAGGGTTAT+GGG | + | chr2_4:45983924-45983943 | None:intergenic | 40.0% | |
AAGGATTCTAGTGAGGGTTA+TGG | + | chr2_4:45983925-45983944 | None:intergenic | 40.0% | |
TTCTCGTCCACTTTAAACCA+AGG | + | chr2_4:45984055-45984074 | None:intergenic | 40.0% | |
! | TTGGTTTAAAGTGGACGAGA+AGG | - | chr2_4:45984054-45984073 | Msa0330880:intron | 40.0% |
TTAGCCGATCCTTATGTGAA+AGG | - | chr2_4:45984230-45984249 | Msa0330880:intron | 40.0% | |
CCCAAATGACCTTTCACATA+AGG | + | chr2_4:45984242-45984261 | None:intergenic | 40.0% | |
TATGTGAAAGGTCATTTGGG+AGG | - | chr2_4:45984242-45984261 | Msa0330880:intron | 40.0% | |
ACTTTCTCCAAAATGGCAAG+AGG | - | chr2_4:45984298-45984317 | Msa0330880:intron | 40.0% | |
!! | CTGAATTCCTCTTGCCATTT+TGG | + | chr2_4:45984308-45984327 | None:intergenic | 40.0% |
GGTTATTGAAGTTCGTGACA+AGG | - | chr2_4:45984364-45984383 | Msa0330880:intron | 40.0% | |
CACTAGATGTCGGTGTAAAA+TGG | - | chr2_4:45984601-45984620 | Msa0330880:intron | 40.0% | |
AGGAATCAACATATAGGCTC+AGG | + | chr2_4:45985119-45985138 | None:intergenic | 40.0% | |
ATGTGGAGTGAACAATGTTG+AGG | + | chr2_4:45985139-45985158 | None:intergenic | 40.0% | |
! | TATTGGTTGGGAATTAAGGG+CGG | + | chr2_4:45985409-45985428 | None:intergenic | 40.0% |
! | CTTAGTACAAGAGAGAGCAT+TGG | - | chr2_4:45985959-45985978 | Msa0330880:intron | 40.0% |
ACTCCAAGTAAGACTTGTGT+TGG | - | chr2_4:45985988-45986007 | Msa0330880:intron | 40.0% | |
ATAACTAGAGTGTAACCCGT+GGG | + | chr2_4:45986657-45986676 | None:intergenic | 40.0% | |
TATAACTAGAGTGTAACCCG+TGG | + | chr2_4:45986658-45986677 | None:intergenic | 40.0% | |
! | TTTTCTTGGCTCCCACATTT+GGG | + | chr2_4:45986993-45987012 | None:intergenic | 40.0% |
AGGGAACCTAACGATATATC+TGG | - | chr2_4:45987046-45987065 | Msa0330880:intron | 40.0% | |
!! | ATACAGAACCGATTTTGTGC+AGG | + | chr2_4:45987168-45987187 | None:intergenic | 40.0% |
GTTCTGTATTTCGTAGGAGT+CGG | - | chr2_4:45987179-45987198 | Msa0330880:intron | 40.0% | |
ATTTCGTAGGAGTCGGAAAA+TGG | - | chr2_4:45987186-45987205 | Msa0330880:intron | 40.0% | |
CGGAAAATGGACGATAATTC+AGG | - | chr2_4:45987199-45987218 | Msa0330880:CDS | 40.0% | |
CTAATGTTATCACGTGGAGA+TGG | + | chr2_4:45987244-45987263 | None:intergenic | 40.0% | |
CATCTCCACGTGATAACATT+AGG | - | chr2_4:45987242-45987261 | Msa0330880:CDS | 40.0% | |
ACTGACCTAATGTTATCACG+TGG | + | chr2_4:45987250-45987269 | None:intergenic | 40.0% | |
! | GTAAATGCTTCTAAAGGGGT+TGG | - | chr2_4:45987268-45987287 | Msa0330880:intron | 40.0% |
TCTACCTGAATCTTACCAGT+CGG | + | chr2_4:45987331-45987350 | None:intergenic | 40.0% | |
GGTAAGATTCAGGTAGAAAG+TGG | - | chr2_4:45987334-45987353 | Msa0330880:intron | 40.0% | |
TCAGGTAGAAAGTGGATCAA+CGG | - | chr2_4:45987342-45987361 | Msa0330880:intron | 40.0% | |
TAGAAAGTGGATCAACGGAA+GGG | - | chr2_4:45987347-45987366 | Msa0330880:intron | 40.0% | |
AAAGAGAGATGTCAAGGACA+TGG | - | chr2_4:45987390-45987409 | Msa0330880:intron | 40.0% | |
ACCAATGTTACATGGAGCAA+TGG | + | chr2_4:45987608-45987627 | None:intergenic | 40.0% | |
ACCTCATTCACATCGGATTT+GGG | + | chr2_4:45987634-45987653 | None:intergenic | 40.0% | |
AACCTCATTCACATCGGATT+TGG | + | chr2_4:45987635-45987654 | None:intergenic | 40.0% | |
ACCACATTCACATCGGATTT+GGG | + | chr2_4:45987673-45987692 | None:intergenic | 40.0% | |
AACCACATTCACATCGGATT+TGG | + | chr2_4:45987674-45987693 | None:intergenic | 40.0% | |
! | TTTATGCCACTAAGTGCTGT+TGG | - | chr2_4:45988158-45988177 | Msa0330880:five_prime_UTR | 40.0% |
!!! | GTTGTACTTTTTCAGCTCAG+AGG | - | chr2_4:45988182-45988201 | Msa0330880:five_prime_UTR | 40.0% |
!! | TCATTCCCTTTTTCGCAAGC+GGG | - | chr2_4:45981106-45981125 | Msa0330880:three_prime_UTR | 45.0% |
TAAACCCCGCTTGCGAAAAA+GGG | + | chr2_4:45981114-45981133 | None:intergenic | 45.0% | |
ATAAACCCCGCTTGCGAAAA+AGG | + | chr2_4:45981115-45981134 | None:intergenic | 45.0% | |
GTGTTAACCCTCCAATTCTG+AGG | - | chr2_4:45981559-45981578 | Msa0330880:CDS | 45.0% | |
! | CTTAGTTACCGACTGAACTC+CGG | + | chr2_4:45981600-45981619 | None:intergenic | 45.0% |
! | CTGAGTGATTGGATTGGATC+TGG | - | chr2_4:45981716-45981735 | Msa0330880:CDS | 45.0% |
! | AGCAGTGAGCTCTGCAATTT+TGG | + | chr2_4:45982194-45982213 | None:intergenic | 45.0% |
! | CTCACTGCTCACTGTGATTT+TGG | - | chr2_4:45982205-45982224 | Msa0330880:CDS | 45.0% |
!! | CTGATTCTGAAACAGTTCGG+TGG | - | chr2_4:45982418-45982437 | Msa0330880:intron | 45.0% |
ATGCATGTTGAAGGGAAGGT+AGG | - | chr2_4:45983070-45983089 | Msa0330880:intron | 45.0% | |
GGTAGGAGTGAAGTTTCTCA+AGG | - | chr2_4:45983286-45983305 | Msa0330880:intron | 45.0% | |
! | CTCAAGGAATGGCCTTTTCT+TGG | - | chr2_4:45983302-45983321 | Msa0330880:intron | 45.0% |
CTTGATGTGACAGAACTTCC+AGG | - | chr2_4:45983395-45983414 | Msa0330880:intron | 45.0% | |
ACAGAACTTCCAGGAATTGC+TGG | - | chr2_4:45983404-45983423 | Msa0330880:intron | 45.0% | |
AAGGGTCTGTTCAAACGCAA+TGG | + | chr2_4:45983596-45983615 | None:intergenic | 45.0% | |
GTTTGAACAGACCCTTGTTG+AGG | - | chr2_4:45983600-45983619 | Msa0330880:intron | 45.0% | |
GACTTCACTCACCTCAACAA+GGG | + | chr2_4:45983614-45983633 | None:intergenic | 45.0% | |
AGACTTCACTCACCTCAACA+AGG | + | chr2_4:45983615-45983634 | None:intergenic | 45.0% | |
GGATTCTAGTGAGGGTTATG+GGG | + | chr2_4:45983923-45983942 | None:intergenic | 45.0% | |
CACATCACCCACTATTGTAC+AGG | + | chr2_4:45984564-45984583 | None:intergenic | 45.0% | |
!! | CTGTACAATAGTGGGTGATG+TGG | - | chr2_4:45984562-45984581 | Msa0330880:intron | 45.0% |
AACCAATGTCACTCTCTTGC+AGG | - | chr2_4:45984883-45984902 | Msa0330880:CDS | 45.0% | |
ACCAATGTCACTCTCTTGCA+GGG | - | chr2_4:45984884-45984903 | Msa0330880:CDS | 45.0% | |
GAAATAGGAGGGATTGTAGG+AGG | + | chr2_4:45985175-45985194 | None:intergenic | 45.0% | |
GTAACTAGAGTGTAACCCGT+GGG | + | chr2_4:45986526-45986545 | None:intergenic | 45.0% | |
TGTAACTAGAGTGTAACCCG+TGG | + | chr2_4:45986527-45986546 | None:intergenic | 45.0% | |
GCAAATGAGACCACCAACAA+AGG | - | chr2_4:45986848-45986867 | Msa0330880:intron | 45.0% | |
TGAGAAGGAACCTTTGTTGG+TGG | + | chr2_4:45986861-45986880 | None:intergenic | 45.0% | |
GGATGAGAAGGAACCTTTGT+TGG | + | chr2_4:45986864-45986883 | None:intergenic | 45.0% | |
TCCTTCTCATCCGTTTCATC+TGG | - | chr2_4:45986872-45986891 | Msa0330880:intron | 45.0% | |
TCCAGATGAAACGGATGAGA+AGG | + | chr2_4:45986876-45986895 | None:intergenic | 45.0% | |
ATTGAAGGCCAAGAGAAGAC+AGG | - | chr2_4:45986935-45986954 | Msa0330880:CDS | 45.0% | |
TCCAAACACCTGTCTTCTCT+TGG | + | chr2_4:45986946-45986965 | None:intergenic | 45.0% | |
AAGCGAAGTTCCCCAAATGT+GGG | - | chr2_4:45986979-45986998 | Msa0330880:intron | 45.0% | |
TTTCTTGGCTCCCACATTTG+GGG | + | chr2_4:45986992-45987011 | None:intergenic | 45.0% | |
! | CTTTTCTTGGCTCCCACATT+TGG | + | chr2_4:45986994-45987013 | None:intergenic | 45.0% |
CAAATGTGGGAGCCAAGAAA+AGG | - | chr2_4:45986992-45987011 | Msa0330880:intron | 45.0% | |
!!! | CGTCGATTCTTGCCTTTTCT+TGG | + | chr2_4:45987007-45987026 | None:intergenic | 45.0% |
CCTCGACACAGAAATTCAGA+GGG | - | chr2_4:45987027-45987046 | Msa0330880:intron | 45.0% | |
GGCTGTAATTCAGCTGTATC+TGG | - | chr2_4:45987067-45987086 | Msa0330880:intron | 45.0% | |
ACTGCTGCTGTCATTGTTCA+AGG | + | chr2_4:45987095-45987114 | None:intergenic | 45.0% | |
AGGAAAGGCCTGCACAAAAT+CGG | - | chr2_4:45987157-45987176 | Msa0330880:intron | 45.0% | |
TAATTCAGGTCCTATTGCGC+AGG | - | chr2_4:45987213-45987232 | Msa0330880:CDS | 45.0% | |
!! | GGTTGGCGTGAAGTTTGTTA+TGG | - | chr2_4:45987285-45987304 | Msa0330880:intron | 45.0% |
CTTTCCGACTGGTAAGATTC+AGG | - | chr2_4:45987324-45987343 | Msa0330880:intron | 45.0% | |
GTAGAAAGTGGATCAACGGA+AGG | - | chr2_4:45987346-45987365 | Msa0330880:intron | 45.0% | |
TCCTTGACATCTCTCTTTGC+CGG | + | chr2_4:45987388-45987407 | None:intergenic | 45.0% | |
GCCATTGCTCCATGTAACAT+TGG | - | chr2_4:45987604-45987623 | Msa0330880:intron | 45.0% | |
TTGGGGGAACCAATGTTACA+TGG | + | chr2_4:45987616-45987635 | None:intergenic | 45.0% | |
CTCATTCACATCGGATTTGG+GGG | + | chr2_4:45987632-45987651 | None:intergenic | 45.0% | |
CCTCATTCACATCGGATTTG+GGG | + | chr2_4:45987633-45987652 | None:intergenic | 45.0% | |
CACATTCACATCGGATTTGG+GGG | + | chr2_4:45987671-45987690 | None:intergenic | 45.0% | |
CCACATTCACATCGGATTTG+GGG | + | chr2_4:45987672-45987691 | None:intergenic | 45.0% | |
AAAAGCCATTCTCCCCTGAA+AGG | - | chr2_4:45987737-45987756 | Msa0330880:intron | 45.0% | |
TTAGACCTTTCAGGGGAGAA+TGG | + | chr2_4:45987745-45987764 | None:intergenic | 45.0% | |
GAGCTGTGTTCGATATCTGT+CGG | + | chr2_4:45987898-45987917 | None:intergenic | 45.0% | |
GTAGCTACATGCATCAGTGT+CGG | - | chr2_4:45987967-45987986 | Msa0330880:five_prime_UTR | 45.0% | |
!! | ACATGCATCAGTGTCGGTAT+CGG | - | chr2_4:45987973-45987992 | Msa0330880:five_prime_UTR | 45.0% |
ACAACACCAACAGCACTTAG+TGG | + | chr2_4:45988167-45988186 | None:intergenic | 45.0% | |
!!! | AATATCAAATTTTAATAAAA+TGG | - | chr2_4:45981163-45981182 | Msa0330880:three_prime_UTR | 5.0% |
!!! | ATATCAAATTTTAATAAAAT+GGG | - | chr2_4:45981164-45981183 | Msa0330880:three_prime_UTR | 5.0% |
!!! | ATTTATATTTTTTTTTCTAT+AGG | - | chr2_4:45983259-45983278 | Msa0330880:intron | 5.0% |
!!! | AGTTATAATATTTTTATTTT+TGG | + | chr2_4:45985332-45985351 | None:intergenic | 5.0% |
!! | TGTAAATATATTTATTATTA+TGG | + | chr2_4:45985826-45985845 | None:intergenic | 5.0% |
!! | CATTCCCTTTTTCGCAAGCG+GGG | - | chr2_4:45981107-45981126 | Msa0330880:three_prime_UTR | 50.0% |
! | TAACCCTCCAATTCTGAGGG+AGG | - | chr2_4:45981563-45981582 | Msa0330880:CDS | 50.0% |
! | AACCCTCCAATTCTGAGGGA+GGG | - | chr2_4:45981564-45981583 | Msa0330880:CDS | 50.0% |
CTGGTAATCCGGAGTTCAGT+CGG | - | chr2_4:45981589-45981608 | Msa0330880:CDS | 50.0% | |
CTTGAGAGTTATTGGGGCTG+TGG | - | chr2_4:45982311-45982330 | Msa0330880:CDS | 50.0% | |
CCAAGTGGTCATCATCACAC+TGG | + | chr2_4:45982845-45982864 | None:intergenic | 50.0% | |
! | CCAGTGTGATGATGACCACT+TGG | - | chr2_4:45982842-45982861 | Msa0330880:intron | 50.0% |
GGGAATGCATGTTGAAGGGA+AGG | - | chr2_4:45983066-45983085 | Msa0330880:intron | 50.0% | |
TTGAAGGGAAGGTAGGACTG+CGG | - | chr2_4:45983077-45983096 | Msa0330880:intron | 50.0% | |
AACTTCCAGGAATTGCTGGC+TGG | - | chr2_4:45983408-45983427 | Msa0330880:intron | 50.0% | |
AGACAGACGGAACTAACCCA+AGG | + | chr2_4:45984409-45984428 | None:intergenic | 50.0% | |
TCCCTGCAAGAGAGTGACAT+TGG | + | chr2_4:45984888-45984907 | None:intergenic | 50.0% | |
TAATTGAGGTAAGGTGGGGG+AGG | + | chr2_4:45985041-45985060 | None:intergenic | 50.0% | |
ATCAACACACACGCAACCCA+CGG | - | chr2_4:45986507-45986526 | Msa0330880:intron | 50.0% | |
ATCATCACACGCACAACCCA+CGG | - | chr2_4:45986638-45986657 | Msa0330880:CDS | 50.0% | |
GAGCAACTTGTGGCACTACA+TGG | + | chr2_4:45986712-45986731 | None:intergenic | 50.0% | |
GCCAAGAGAAGACAGGTGTT+TGG | - | chr2_4:45986942-45986961 | Msa0330880:CDS | 50.0% | |
GGTGTTTGGATACATCAGCC+AGG | - | chr2_4:45986956-45986975 | Msa0330880:intron | 50.0% | |
ATTTGGGGAACTTCGCTTCC+TGG | + | chr2_4:45986977-45986996 | None:intergenic | 50.0% | |
GAAGCGAAGTTCCCCAAATG+TGG | - | chr2_4:45986978-45986997 | Msa0330880:intron | 50.0% | |
GCCTCGACACAGAAATTCAG+AGG | - | chr2_4:45987026-45987045 | Msa0330880:intron | 50.0% | |
CCCTCTGAATTTCTGTGTCG+AGG | + | chr2_4:45987030-45987049 | None:intergenic | 50.0% | |
GATGGAAAGTCCTGCGCAAT+AGG | + | chr2_4:45987226-45987245 | None:intergenic | 50.0% | |
!! | AACATTGCTGGCTTTCCGAC+TGG | - | chr2_4:45987313-45987332 | Msa0330880:intron | 50.0% |
CCTTGACATCTCTCTTTGCC+GGG | + | chr2_4:45987387-45987406 | None:intergenic | 50.0% | |
CCCCAAATCCGATGTGAATG+AGG | - | chr2_4:45987630-45987649 | Msa0330880:intron | 50.0% | |
CCCCAAATCCGATGTGAATG+TGG | - | chr2_4:45987630-45987649 | Msa0330880:intron | 50.0% | |
! | TTGACCACAGTGGTGTTGGA+TGG | + | chr2_4:45987706-45987725 | None:intergenic | 50.0% |
CTTGTTGACCACAGTGGTGT+TGG | + | chr2_4:45987710-45987729 | None:intergenic | 50.0% | |
CAACACCACTGTGGTCAACA+AGG | - | chr2_4:45987708-45987727 | Msa0330880:intron | 50.0% | |
! | TCAGGGGAGAATGGCTTTTG+AGG | + | chr2_4:45987736-45987755 | None:intergenic | 50.0% |
CGCAAGCGGGGTTTATAACG+CGG | - | chr2_4:45981119-45981138 | Msa0330880:three_prime_UTR | 55.0% | |
! | ACCCTCCAATTCTGAGGGAG+GGG | - | chr2_4:45981565-45981584 | Msa0330880:CDS | 55.0% |
ACCCCTCCCTCAGAATTGGA+GGG | + | chr2_4:45981569-45981588 | None:intergenic | 55.0% | |
ACAAGCCAGCCAGCAATTCC+TGG | + | chr2_4:45983416-45983435 | None:intergenic | 55.0% | |
TCAACACACACGCAACCCAC+GGG | - | chr2_4:45986508-45986527 | Msa0330880:intron | 55.0% | |
TCATCACACGCACAACCCAC+GGG | - | chr2_4:45986639-45986658 | Msa0330880:CDS | 55.0% | |
AGTGGATCAACGGAAGGGAG+TGG | - | chr2_4:45987352-45987371 | Msa0330880:intron | 55.0% | |
TCTCTCTTTGCCGGGCTATC+AGG | + | chr2_4:45987379-45987398 | None:intergenic | 55.0% | |
CCCGGCAAAGAGAGATGTCA+AGG | - | chr2_4:45987384-45987403 | Msa0330880:intron | 55.0% | |
TGTGCCATCCAACACCACTG+TGG | - | chr2_4:45987699-45987718 | Msa0330880:intron | 55.0% | |
AGGCTCCTTGTTGACCACAG+TGG | + | chr2_4:45987716-45987735 | None:intergenic | 55.0% | |
GACCCCTCCCTCAGAATTGG+AGG | + | chr2_4:45981570-45981589 | None:intergenic | 60.0% | |
CCAGACCCCTCCCTCAGAAT+TGG | + | chr2_4:45981573-45981592 | None:intergenic | 60.0% | |
! | CCAATTCTGAGGGAGGGGTC+TGG | - | chr2_4:45981570-45981589 | Msa0330880:CDS | 60.0% |
GAGGGAGGGGTCTGGTAATC+CGG | - | chr2_4:45981578-45981597 | Msa0330880:CDS | 60.0% | |
TGAGGTAAGGTGGGGGAGGA+GGG | + | chr2_4:45985037-45985056 | None:intergenic | 60.0% | |
TTGAGGTAAGGTGGGGGAGG+AGG | + | chr2_4:45985038-45985057 | None:intergenic | 60.0% | |
AGGGAGTGGTCCTGATAGCC+CGG | - | chr2_4:45987366-45987385 | Msa0330880:intron | 60.0% | |
GAGGTAAGGTGGGGGAGGAG+GGG | + | chr2_4:45985036-45985055 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_4 | gene | 45980872 | 45988271 | 45980872 | ID=Msa0330880;Name=Msa0330880 |
chr2_4 | mRNA | 45980872 | 45988271 | 45980872 | ID=Msa0330880-mRNA-1;Parent=Msa0330880;Name=Msa0330880-mRNA-1;_AED=0.07;_eAED=0.07;_QI=397|0.83|0.92|0.92|1|1|13|425|779 |
chr2_4 | exon | 45980872 | 45982355 | 45980872 | ID=Msa0330880-mRNA-1:exon:13936;Parent=Msa0330880-mRNA-1 |
chr2_4 | exon | 45984115 | 45984238 | 45984115 | ID=Msa0330880-mRNA-1:exon:13935;Parent=Msa0330880-mRNA-1 |
chr2_4 | exon | 45984732 | 45984915 | 45984732 | ID=Msa0330880-mRNA-1:exon:13934;Parent=Msa0330880-mRNA-1 |
chr2_4 | exon | 45985001 | 45985093 | 45985001 | ID=Msa0330880-mRNA-1:exon:13933;Parent=Msa0330880-mRNA-1 |
chr2_4 | exon | 45985292 | 45985340 | 45985292 | ID=Msa0330880-mRNA-1:exon:13932;Parent=Msa0330880-mRNA-1 |
chr2_4 | exon | 45985522 | 45985563 | 45985522 | ID=Msa0330880-mRNA-1:exon:13931;Parent=Msa0330880-mRNA-1 |
chr2_4 | exon | 45985710 | 45985862 | 45985710 | ID=Msa0330880-mRNA-1:exon:13930;Parent=Msa0330880-mRNA-1 |
chr2_4 | exon | 45986056 | 45986187 | 45986056 | ID=Msa0330880-mRNA-1:exon:13929;Parent=Msa0330880-mRNA-1 |
chr2_4 | exon | 45986280 | 45986372 | 45986280 | ID=Msa0330880-mRNA-1:exon:13928;Parent=Msa0330880-mRNA-1 |
chr2_4 | exon | 45986589 | 45986732 | 45986589 | ID=Msa0330880-mRNA-1:exon:13927;Parent=Msa0330880-mRNA-1 |
chr2_4 | exon | 45986906 | 45986971 | 45986906 | ID=Msa0330880-mRNA-1:exon:13926;Parent=Msa0330880-mRNA-1 |
chr2_4 | exon | 45987194 | 45987268 | 45987194 | ID=Msa0330880-mRNA-1:exon:13925;Parent=Msa0330880-mRNA-1 |
chr2_4 | exon | 45987749 | 45988271 | 45987749 | ID=Msa0330880-mRNA-1:exon:13924;Parent=Msa0330880-mRNA-1 |
chr2_4 | five_prime_UTR | 45987875 | 45988271 | 45987875 | ID=Msa0330880-mRNA-1:five_prime_utr;Parent=Msa0330880-mRNA-1 |
chr2_4 | CDS | 45987749 | 45987874 | 45987749 | ID=Msa0330880-mRNA-1:cds;Parent=Msa0330880-mRNA-1 |
chr2_4 | CDS | 45987194 | 45987268 | 45987194 | ID=Msa0330880-mRNA-1:cds;Parent=Msa0330880-mRNA-1 |
chr2_4 | CDS | 45986906 | 45986971 | 45986906 | ID=Msa0330880-mRNA-1:cds;Parent=Msa0330880-mRNA-1 |
chr2_4 | CDS | 45986589 | 45986732 | 45986589 | ID=Msa0330880-mRNA-1:cds;Parent=Msa0330880-mRNA-1 |
chr2_4 | CDS | 45986280 | 45986372 | 45986280 | ID=Msa0330880-mRNA-1:cds;Parent=Msa0330880-mRNA-1 |
chr2_4 | CDS | 45986056 | 45986187 | 45986056 | ID=Msa0330880-mRNA-1:cds;Parent=Msa0330880-mRNA-1 |
chr2_4 | CDS | 45985710 | 45985862 | 45985710 | ID=Msa0330880-mRNA-1:cds;Parent=Msa0330880-mRNA-1 |
chr2_4 | CDS | 45985522 | 45985563 | 45985522 | ID=Msa0330880-mRNA-1:cds;Parent=Msa0330880-mRNA-1 |
chr2_4 | CDS | 45985292 | 45985340 | 45985292 | ID=Msa0330880-mRNA-1:cds;Parent=Msa0330880-mRNA-1 |
chr2_4 | CDS | 45985001 | 45985093 | 45985001 | ID=Msa0330880-mRNA-1:cds;Parent=Msa0330880-mRNA-1 |
chr2_4 | CDS | 45984732 | 45984915 | 45984732 | ID=Msa0330880-mRNA-1:cds;Parent=Msa0330880-mRNA-1 |
chr2_4 | CDS | 45984115 | 45984238 | 45984115 | ID=Msa0330880-mRNA-1:cds;Parent=Msa0330880-mRNA-1 |
chr2_4 | CDS | 45981297 | 45982355 | 45981297 | ID=Msa0330880-mRNA-1:cds;Parent=Msa0330880-mRNA-1 |
chr2_4 | three_prime_UTR | 45980872 | 45981296 | 45980872 | ID=Msa0330880-mRNA-1:three_prime_utr;Parent=Msa0330880-mRNA-1 |
Gene Sequence |
Protein sequence |