Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0162690 | XP_003590329.1 | 97.640 | 339 | 8 | 0 | 1 | 339 | 1 | 339 | 0.0 | 689 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0162690 | sp|Q9ZSD4|SY121_ARATH | 68.035 | 341 | 99 | 3 | 1 | 333 | 1 | 339 | 7.87e-144 | 413 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0162690 | G7I8J4 | 97.640 | 339 | 8 | 0 | 1 | 339 | 1 | 339 | 0.0 | 689 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001380 | Msa0162690 | 0.819562 | 1.087933e-52 | -8.615850e-47 |
| Msa0004480 | Msa0162690 | 0.810540 | 1.095405e-50 | -8.615850e-47 |
| Msa0011050 | Msa0162690 | 0.819988 | 8.697600e-53 | -8.615850e-47 |
| Msa0012100 | Msa0162690 | 0.838971 | 2.094444e-57 | -8.615850e-47 |
| Msa0013280 | Msa0162690 | 0.818514 | 1.883593e-52 | -8.615850e-47 |
| Msa0033850 | Msa0162690 | 0.841847 | 3.705706e-58 | -8.615850e-47 |
| Msa0048390 | Msa0162690 | 0.816874 | 4.415810e-52 | -8.615850e-47 |
| Msa0059900 | Msa0162690 | 0.801225 | 9.954426e-49 | -8.615850e-47 |
| Msa0060070 | Msa0162690 | 0.855395 | 6.491720e-62 | -8.615850e-47 |
| Msa0061500 | Msa0162690 | 0.848086 | 7.670007e-60 | -8.615850e-47 |
| Msa0064140 | Msa0162690 | 0.825058 | 5.763503e-54 | -8.615850e-47 |
| Msa0071480 | Msa0162690 | 0.878525 | 2.616562e-69 | -8.615850e-47 |
| Msa0081620 | Msa0162690 | 0.852356 | 4.870161e-61 | -8.615850e-47 |
| Msa0086560 | Msa0162690 | 0.823217 | 1.559646e-53 | -8.615850e-47 |
| Msa0092410 | Msa0162690 | 0.837538 | 4.901108e-57 | -8.615850e-47 |
| Msa0106530 | Msa0162690 | 0.826653 | 2.411032e-54 | -8.615850e-47 |
| Msa0119440 | Msa0162690 | 0.936730 | 1.087664e-97 | -8.615850e-47 |
| Msa0133100 | Msa0162690 | 0.819614 | 1.058682e-52 | -8.615850e-47 |
| Msa0136630 | Msa0162690 | 0.872713 | 2.574269e-67 | -8.615850e-47 |
| Msa0138900 | Msa0162690 | 0.811425 | 7.047220e-51 | -8.615850e-47 |
| Msa0139000 | Msa0162690 | 0.831548 | 1.568654e-55 | -8.615850e-47 |
| Msa0139670 | Msa0162690 | 0.823758 | 1.165787e-53 | -8.615850e-47 |
| Msa0151220 | Msa0162690 | 0.837652 | 4.580933e-57 | -8.615850e-47 |
| Msa0152560 | Msa0162690 | 0.855369 | 6.606321e-62 | -8.615850e-47 |
| Msa0155210 | Msa0162690 | 0.813942 | 1.982320e-51 | -8.615850e-47 |
| Msa0162690 | Msa0173960 | 0.839133 | 1.900850e-57 | -8.615850e-47 |
| Msa0162690 | Msa0176260 | 0.826640 | 2.427662e-54 | -8.615850e-47 |
| Msa0162690 | Msa0179100 | 0.813286 | 2.764846e-51 | -8.615850e-47 |
| Msa0162690 | Msa0187310 | 0.852963 | 3.268280e-61 | -8.615850e-47 |
| Msa0162690 | Msa0187830 | 0.852471 | 4.517466e-61 | -8.615850e-47 |
| Msa0162690 | Msa0189610 | 0.823845 | 1.112388e-53 | -8.615850e-47 |
| Msa0162690 | Msa0194010 | 0.829011 | 6.533955e-55 | -8.615850e-47 |
| Msa0162690 | Msa0201570 | 0.841242 | 5.352294e-58 | -8.615850e-47 |
| Msa0162690 | Msa0213430 | 0.882354 | 1.117591e-70 | -8.615850e-47 |
| Msa0162690 | Msa0220750 | 0.813190 | 2.901919e-51 | -8.615850e-47 |
| Msa0162690 | Msa0224130 | 0.812870 | 3.410593e-51 | -8.615850e-47 |
| Msa0162690 | Msa0235880 | 0.832502 | 9.112330e-56 | -8.615850e-47 |
| Msa0162690 | Msa0240270 | 0.845644 | 3.571790e-59 | -8.615850e-47 |
| Msa0162690 | Msa0245540 | 0.801837 | 7.457361e-49 | -8.615850e-47 |
| Msa0162690 | Msa0259440 | 0.834878 | 2.323215e-56 | -8.615850e-47 |
| Msa0162690 | Msa0259580 | 0.830305 | 3.164926e-55 | -8.615850e-47 |
| Msa0162690 | Msa0265270 | 0.809988 | 1.441020e-50 | -8.615850e-47 |
| Msa0162690 | Msa0269560 | 0.831492 | 1.618732e-55 | -8.615850e-47 |
| Msa0162690 | Msa0277410 | 0.802234 | 6.180544e-49 | -8.615850e-47 |
| Msa0162690 | Msa0282720 | 0.857731 | 1.336537e-62 | -8.615850e-47 |
| Msa0162690 | Msa0284450 | 0.822016 | 2.967710e-53 | -8.615850e-47 |
| Msa0162690 | Msa0291280 | 0.828311 | 9.647238e-55 | -8.615850e-47 |
| Msa0162690 | Msa0302730 | 0.809699 | 1.662723e-50 | -8.615850e-47 |
| Msa0162690 | Msa0305620 | 0.848255 | 6.887331e-60 | -8.615850e-47 |
| Msa0162690 | Msa0319290 | 0.811680 | 6.203296e-51 | -8.615850e-47 |
| Msa0162690 | Msa0330880 | 0.806409 | 8.343973e-50 | -8.615850e-47 |
| Msa0162690 | Msa0347750 | 0.812797 | 3.538574e-51 | -8.615850e-47 |
| Msa0162690 | Msa0358110 | 0.823867 | 1.099341e-53 | -8.615850e-47 |
| Msa0162690 | Msa0358120 | 0.810235 | 1.275036e-50 | -8.615850e-47 |
| Msa0162690 | Msa0364790 | 0.861407 | 1.048862e-63 | -8.615850e-47 |
| Msa0162690 | Msa0377840 | 0.825859 | 3.725097e-54 | -8.615850e-47 |
| Msa0162690 | Msa0380600 | 0.875639 | 2.629147e-68 | -8.615850e-47 |
| Msa0162690 | Msa0382370 | 0.802585 | 5.231596e-49 | -8.615850e-47 |
| Msa0162690 | Msa0386010 | 0.810805 | 9.604653e-51 | -8.615850e-47 |
| Msa0162690 | Msa0389210 | 0.805628 | 1.217824e-49 | -8.615850e-47 |
| Msa0162690 | Msa0403490 | 0.803608 | 3.214475e-49 | -8.615850e-47 |
| Msa0162690 | Msa0408340 | 0.827691 | 1.360317e-54 | -8.615850e-47 |
| Msa0162690 | Msa0412260 | 0.833942 | 3.990992e-56 | -8.615850e-47 |
| Msa0162690 | Msa0418400 | 0.856285 | 3.568320e-62 | -8.615850e-47 |
| Msa0162690 | Msa0422180 | 0.805259 | 1.455300e-49 | -8.615850e-47 |
| Msa0162690 | Msa0426560 | 0.849292 | 3.551089e-60 | -8.615850e-47 |
| Msa0162690 | Msa0430240 | 0.874474 | 6.565377e-68 | -8.615850e-47 |
| Msa0162690 | Msa0432160 | 0.801086 | 1.062659e-48 | -8.615850e-47 |
| Msa0162690 | Msa0437070 | 0.856683 | 2.726602e-62 | -8.615850e-47 |
| Msa0162690 | Msa0456770 | 0.845299 | 4.429507e-59 | -8.615850e-47 |
| Msa0162690 | Msa0472710 | 0.824907 | 6.257959e-54 | -8.615850e-47 |
| Msa0162690 | Msa0472720 | 0.812772 | 3.582878e-51 | -8.615850e-47 |
| Msa0162690 | Msa0472770 | 0.845825 | 3.188808e-59 | -8.615850e-47 |
| Msa0162690 | Msa0473140 | 0.823760 | 1.164363e-53 | -8.615850e-47 |
| Msa0162690 | Msa0482280 | 0.820983 | 5.140766e-53 | -8.615850e-47 |
| Msa0162690 | Msa0482940 | 0.814002 | 1.922889e-51 | -8.615850e-47 |
| Msa0162690 | Msa0484800 | 0.822267 | 2.595112e-53 | -8.615850e-47 |
| Msa0162690 | Msa0500400 | 0.839811 | 1.267275e-57 | -8.615850e-47 |
| Msa0162690 | Msa0501410 | 0.807690 | 4.467982e-50 | -8.615850e-47 |
| Msa0162690 | Msa0517610 | 0.844131 | 9.140062e-59 | -8.615850e-47 |
| Msa0162690 | Msa0521010 | 0.804966 | 1.676329e-49 | -8.615850e-47 |
| Msa0162690 | Msa0524330 | 0.807063 | 6.070732e-50 | -8.615850e-47 |
| Msa0162690 | Msa0524440 | 0.823177 | 1.593609e-53 | -8.615850e-47 |
| Msa0162690 | Msa0534870 | 0.817940 | 2.540944e-52 | -8.615850e-47 |
| Msa0162690 | Msa0549890 | 0.803236 | 3.838481e-49 | -8.615850e-47 |
| Msa0162690 | Msa0574600 | 0.811403 | 7.124475e-51 | -8.615850e-47 |
| Msa0162690 | Msa0579670 | 0.805432 | 1.338886e-49 | -8.615850e-47 |
| Msa0162690 | Msa0590390 | 0.805695 | 1.178956e-49 | -8.615850e-47 |
| Msa0162690 | Msa0613340 | 0.811855 | 5.682319e-51 | -8.615850e-47 |
| Msa0162690 | Msa0616450 | 0.800765 | 1.235802e-48 | -8.615850e-47 |
| Msa0162690 | Msa0631320 | 0.807791 | 4.252432e-50 | -8.615850e-47 |
| Msa0162690 | Msa0638990 | 0.809600 | 1.746229e-50 | -8.615850e-47 |
| Msa0162690 | Msa0708310 | 0.826144 | 3.187536e-54 | -8.615850e-47 |
| Msa0162690 | Msa0709120 | 0.820594 | 6.315723e-53 | -8.615850e-47 |
| Msa0162690 | Msa0721340 | 0.807055 | 6.093129e-50 | -8.615850e-47 |
| Msa0162690 | Msa0735550 | 0.809391 | 1.936340e-50 | -8.615850e-47 |
| Msa0162690 | Msa0743870 | 0.812393 | 4.336295e-51 | -8.615850e-47 |
| Msa0162690 | Msa0748660 | 0.859858 | 3.091446e-63 | -8.615850e-47 |
| Msa0162690 | Msa0750810 | 0.805478 | 1.309263e-49 | -8.615850e-47 |
| Msa0162690 | Msa0758250 | 0.827412 | 1.587437e-54 | -8.615850e-47 |
| Msa0162690 | Msa0764920 | 0.813313 | 2.726375e-51 | -8.615850e-47 |
| Msa0162690 | Msa0769720 | 0.813212 | 2.870021e-51 | -8.615850e-47 |
| Msa0162690 | Msa0772740 | 0.807589 | 4.694310e-50 | -8.615850e-47 |
| Msa0162690 | Msa0775920 | 0.842492 | 2.501466e-58 | -8.615850e-47 |
| Msa0162690 | Msa0812950 | 0.822617 | 2.151879e-53 | -8.615850e-47 |
| Msa0162690 | Msa0813260 | 0.868384 | 6.794371e-66 | -8.615850e-47 |
| Msa0162690 | Msa0844610 | 0.812038 | 5.182613e-51 | -8.615850e-47 |
| Msa0162690 | Msa0853810 | 0.867650 | 1.170207e-65 | -8.615850e-47 |
| Msa0162690 | Msa0860250 | 0.851530 | 8.357638e-61 | -8.615850e-47 |
| Msa0162690 | Msa0863720 | 0.831057 | 2.070889e-55 | -8.615850e-47 |
| Msa0162690 | Msa0865970 | 0.846111 | 2.666950e-59 | -8.615850e-47 |
| Msa0162690 | Msa0866070 | 0.843689 | 1.200787e-58 | -8.615850e-47 |
| Msa0162690 | Msa0945130 | 0.800521 | 1.386459e-48 | -8.615850e-47 |
| Msa0162690 | Msa0964960 | 0.839592 | 1.445300e-57 | -8.615850e-47 |
| Msa0162690 | Msa0968050 | 0.842341 | 2.742821e-58 | -8.615850e-47 |
| Msa0162690 | Msa0972810 | 0.823556 | 1.299815e-53 | -8.615850e-47 |
| Msa0162690 | Msa0973070 | 0.835335 | 1.781959e-56 | -8.615850e-47 |
| Msa0162690 | Msa0982780 | 0.825089 | 5.668230e-54 | -8.615850e-47 |
| Msa0162690 | Msa0994910 | 0.811519 | 6.721426e-51 | -8.615850e-47 |
| Msa0162690 | Msa0999160 | 0.830730 | 2.490905e-55 | -8.615850e-47 |
| Msa0162690 | Msa1034700 | 0.817905 | 2.587170e-52 | -8.615850e-47 |
| Msa0162690 | Msa1043120 | 0.844602 | 6.828771e-59 | -8.615850e-47 |
| Msa0162690 | Msa1043330 | 0.801358 | 9.348183e-49 | -8.615850e-47 |
| Msa0162690 | Msa1063370 | 0.823798 | 1.140943e-53 | -8.615850e-47 |
| Msa0162690 | Msa1063410 | 0.802019 | 6.840953e-49 | -8.615850e-47 |
| Msa0162690 | Msa1074540 | 0.835556 | 1.566136e-56 | -8.615850e-47 |
| Msa0162690 | Msa1078330 | 0.801618 | 8.270039e-49 | -8.615850e-47 |
| Msa0162690 | Msa1093100 | 0.801452 | 8.946154e-49 | -8.615850e-47 |
| Msa0162690 | Msa1098440 | 0.818218 | 2.198790e-52 | -8.615850e-47 |
| Msa0162690 | Msa1100930 | 0.824499 | 7.811126e-54 | -8.615850e-47 |
| Msa0162690 | Msa1108720 | 0.841664 | 4.141900e-58 | -8.615850e-47 |
| Msa0162690 | Msa1123720 | 0.852617 | 4.104035e-61 | -8.615850e-47 |
| Msa0162690 | Msa1138910 | 0.803489 | 3.401387e-49 | -8.615850e-47 |
| Msa0162690 | Msa1143020 | 0.805360 | 1.386260e-49 | -8.615850e-47 |
| Msa0162690 | Msa1152410 | 0.839640 | 1.404041e-57 | -8.615850e-47 |
| Msa0162690 | Msa1153390 | 0.801704 | 7.942878e-49 | -8.615850e-47 |
| Msa0162690 | Msa1156820 | 0.806311 | 8.750401e-50 | -8.615850e-47 |
| Msa0162690 | Msa1184780 | 0.828556 | 8.421175e-55 | -8.615850e-47 |
| Msa0162690 | Msa1189970 | 0.815133 | 1.080566e-51 | -8.615850e-47 |
| Msa0162690 | Msa1209190 | 0.800991 | 1.111628e-48 | -8.615850e-47 |
| Msa0162690 | Msa1214170 | 0.839748 | 1.316170e-57 | -8.615850e-47 |
| Msa0162690 | Msa1219150 | 0.808123 | 3.614924e-50 | -8.615850e-47 |
| Msa0162690 | Msa1220880 | 0.815246 | 1.019695e-51 | -8.615850e-47 |
| Msa0162690 | Msa1221330 | 0.825712 | 4.035518e-54 | -8.615850e-47 |
| Msa0162690 | Msa1225100 | 0.869326 | 3.366358e-66 | -8.615850e-47 |
| Msa0162690 | Msa1234620 | 0.819087 | 1.396444e-52 | -8.615850e-47 |
| Msa0162690 | Msa1238690 | 0.830903 | 2.259234e-55 | -8.615850e-47 |
| Msa0162690 | Msa1246700 | 0.824572 | 7.504163e-54 | -8.615850e-47 |
| Msa0162690 | Msa1253660 | 0.811950 | 5.417087e-51 | -8.615850e-47 |
| Msa0162690 | Msa1258670 | 0.824693 | 7.029468e-54 | -8.615850e-47 |
| Msa0162690 | Msa1260680 | 0.832468 | 9.290898e-56 | -8.615850e-47 |
| Msa0162690 | Msa1266170 | 0.807602 | 4.666308e-50 | -8.615850e-47 |
| Msa0162690 | Msa1277780 | 0.812436 | 4.243327e-51 | -8.615850e-47 |
| Msa0162690 | Msa1279480 | 0.801427 | 9.051985e-49 | -8.615850e-47 |
| Msa0162690 | Msa1280150 | 0.851971 | 6.269726e-61 | -8.615850e-47 |
| Msa0162690 | Msa1280170 | 0.850997 | 1.182049e-60 | -8.615850e-47 |
| Msa0162690 | Msa1285200 | 0.880258 | 6.367809e-70 | -8.615850e-47 |
| Msa0162690 | Msa1329870 | 0.870784 | 1.122999e-66 | -8.615850e-47 |
| Msa0162690 | Msa1332050 | 0.822759 | 1.994281e-53 | -8.615850e-47 |
| Msa0162690 | Msa1338400 | 0.812594 | 3.919231e-51 | -8.615850e-47 |
| Msa0162690 | Msa1353890 | 0.824167 | 9.347070e-54 | -8.615850e-47 |
| Msa0162690 | Msa1355890 | 0.809254 | 2.072445e-50 | -8.615850e-47 |
| Msa0162690 | Msa1360020 | 0.835039 | 2.116172e-56 | -8.615850e-47 |
| Msa0162690 | Msa1361250 | 0.823105 | 1.656330e-53 | -8.615850e-47 |
| Msa0162690 | Msa1364080 | 0.805547 | 1.266188e-49 | -8.615850e-47 |
| Msa0162690 | Msa1365270 | 0.803924 | 2.763117e-49 | -8.615850e-47 |
| Msa0162690 | Msa1365610 | 0.823895 | 1.082546e-53 | -8.615850e-47 |
| Msa0162690 | Msa1367530 | 0.820549 | 6.469728e-53 | -8.615850e-47 |
| Msa0162690 | Msa1370590 | 0.810403 | 1.173108e-50 | -8.615850e-47 |
| Msa0162690 | Msa1376450 | 0.832021 | 1.198856e-55 | -8.615850e-47 |
| Msa0162690 | Msa1384100 | 0.813097 | 3.041831e-51 | -8.615850e-47 |
| Msa0162690 | Msa1389760 | 0.846343 | 2.305476e-59 | -8.615850e-47 |
| Msa0162690 | Msa1391550 | 0.826198 | 3.093762e-54 | -8.615850e-47 |
| Msa0162690 | Msa1405220 | 0.870267 | 1.660307e-66 | -8.615850e-47 |
| Msa0162690 | Msa1405820 | 0.801196 | 1.009001e-48 | -8.615850e-47 |
| Msa0162690 | Msa1408050 | 0.827666 | 1.379252e-54 | -8.615850e-47 |
| Msa0162690 | Msa1408180 | 0.812598 | 3.911781e-51 | -8.615850e-47 |
| Msa0162690 | Msa1421900 | 0.840587 | 7.948513e-58 | -8.615850e-47 |
| Msa0162690 | Msa1424630 | 0.851023 | 1.162687e-60 | -8.615850e-47 |
| Msa0162690 | Msa1430550 | 0.830156 | 3.441710e-55 | -8.615850e-47 |
| Msa0162690 | Msa1444120 | 0.816448 | 5.501546e-52 | -8.615850e-47 |
| Msa0162690 | Msa1448980 | 0.812979 | 3.227759e-51 | -8.615850e-47 |
| Msa0162690 | Msa1457160 | 0.847891 | 8.679070e-60 | -8.615850e-47 |
| Msa0162690 | Msa1458340 | 0.801384 | 9.237780e-49 | -8.615850e-47 |
| Msa0162690 | Msa1460750 | 0.800579 | 1.349020e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0162690 | MtrunA17_Chr1g0177131 | 97.640 | 339 | 8 | 0 | 1 | 339 | 1 | 339 | 0.0 | 689 |
| Msa0162690 | MtrunA17_Chr1g0177121 | 68.729 | 291 | 83 | 3 | 1 | 289 | 1 | 285 | 2.48e-146 | 415 |
| Msa0162690 | MtrunA17_Chr4g0048121 | 59.107 | 291 | 108 | 2 | 1 | 291 | 1 | 280 | 8.87e-124 | 357 |
| Msa0162690 | MtrunA17_Chr7g0267551 | 56.357 | 291 | 110 | 2 | 1 | 291 | 1 | 274 | 1.30e-115 | 336 |
| Msa0162690 | MtrunA17_Chr2g0281201 | 60.976 | 246 | 96 | 0 | 59 | 304 | 1 | 246 | 1.31e-113 | 330 |
| Msa0162690 | MtrunA17_Chr5g0398891 | 43.434 | 297 | 159 | 3 | 1 | 289 | 1 | 296 | 6.55e-84 | 256 |
| Msa0162690 | MtrunA17_Chr6g0461261 | 47.778 | 270 | 141 | 0 | 41 | 310 | 30 | 299 | 6.45e-79 | 243 |
| Msa0162690 | MtrunA17_Chr2g0322801 | 44.051 | 311 | 168 | 3 | 1 | 311 | 1 | 305 | 2.38e-75 | 234 |
| Msa0162690 | MtrunA17_Chr5g0404401 | 41.129 | 248 | 136 | 2 | 44 | 290 | 40 | 278 | 3.95e-60 | 195 |
| Msa0162690 | MtrunA17_Chr8g0370611 | 43.373 | 83 | 47 | 0 | 44 | 126 | 40 | 122 | 6.25e-15 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0162690 | AT3G11820.1 | 68.035 | 341 | 99 | 3 | 1 | 333 | 1 | 339 | 8.00e-145 | 413 |
| Msa0162690 | AT3G11820.2 | 69.836 | 305 | 83 | 2 | 37 | 333 | 5 | 308 | 1.03e-143 | 409 |
| Msa0162690 | AT1G61290.1 | 57.705 | 305 | 115 | 3 | 1 | 304 | 1 | 292 | 2.02e-127 | 367 |
| Msa0162690 | AT1G61290.2 | 57.705 | 305 | 115 | 3 | 1 | 304 | 1 | 292 | 2.02e-127 | 367 |
| Msa0162690 | AT1G11250.1 | 59.794 | 291 | 100 | 2 | 1 | 291 | 1 | 274 | 2.99e-124 | 358 |
| Msa0162690 | AT3G52400.1 | 62.620 | 313 | 115 | 2 | 1 | 313 | 1 | 311 | 3.25e-124 | 360 |
| Msa0162690 | AT4G03330.1 | 57.785 | 289 | 113 | 2 | 1 | 289 | 1 | 280 | 9.88e-118 | 342 |
| Msa0162690 | AT3G03800.2 | 45.192 | 312 | 157 | 2 | 1 | 310 | 1 | 300 | 3.86e-81 | 249 |
| Msa0162690 | AT3G03800.1 | 45.192 | 312 | 157 | 2 | 1 | 310 | 1 | 300 | 3.86e-81 | 249 |
| Msa0162690 | AT1G08560.1 | 42.953 | 298 | 149 | 5 | 1 | 289 | 1 | 286 | 4.66e-76 | 236 |
| Msa0162690 | AT5G08080.1 | 45.513 | 312 | 159 | 2 | 1 | 312 | 1 | 301 | 1.66e-71 | 224 |
| Msa0162690 | AT5G08080.4 | 45.513 | 312 | 159 | 2 | 1 | 312 | 1 | 301 | 1.66e-71 | 224 |
| Msa0162690 | AT5G08080.3 | 43.963 | 323 | 159 | 4 | 1 | 312 | 1 | 312 | 1.90e-69 | 219 |
| Msa0162690 | AT2G18260.2 | 39.773 | 264 | 152 | 2 | 44 | 307 | 46 | 302 | 1.85e-60 | 196 |
| Msa0162690 | AT2G18260.1 | 39.773 | 264 | 152 | 2 | 44 | 307 | 46 | 302 | 1.85e-60 | 196 |
| Msa0162690 | AT5G08080.5 | 40.758 | 211 | 114 | 2 | 1 | 211 | 1 | 200 | 1.89e-34 | 126 |
| Msa0162690 | AT5G08080.2 | 40.758 | 211 | 114 | 2 | 1 | 211 | 1 | 200 | 1.89e-34 | 126 |
Find 150 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATGTCCTTGCATTGTTTA+AGG | 0.103508 | 1_4:-39959008 | Msa0162690:three_prime_UTR |
| TAATGCGGCGAACCGGAATT+TGG | 0.208941 | 1_4:-39961453 | Msa0162690:CDS |
| TCCTGCTCCTGCTCCGGTTC+TGG | 0.254484 | 1_4:+39961703 | None:intergenic |
| CCCGTCACCTCCTCCTCCTT+CGG | 0.261959 | 1_4:-39959635 | Msa0162690:CDS |
| TTCGGGTGGTACTTAATCTT+AGG | 0.262579 | 1_4:-39959617 | Msa0162690:exon |
| CCTCTCTTGAATTTCATTGA+TGG | 0.265261 | 1_4:+39959981 | None:intergenic |
| ACAAGGCAGGGGAAGAATTC+TGG | 0.274465 | 1_4:-39960007 | Msa0162690:CDS |
| CTATAAACTTCTATGAATAT+TGG | 0.283222 | 1_4:-39959578 | Msa0162690:three_prime_UTR |
| TACAAAATTAACAAATTCAT+TGG | 0.295484 | 1_4:+39959204 | None:intergenic |
| TCCATTTCCTTGTGTTTCTC+TGG | 0.322362 | 1_4:+39959782 | None:intergenic |
| TTTAGCATCGTGAACCGTTT+TGG | 0.332874 | 1_4:+39961574 | None:intergenic |
| CCGTCACCTCCTCCTCCTTC+GGG | 0.338871 | 1_4:-39959634 | Msa0162690:CDS |
| GTCCACACCCTTCCAAATTC+CGG | 0.357098 | 1_4:+39961441 | None:intergenic |
| TGAAGATGACCCTTCATATA+TGG | 0.360758 | 1_4:+39959128 | None:intergenic |
| TAGAAGTATAATACAATAAC+AGG | 0.363828 | 1_4:+39959759 | None:intergenic |
| CATCTGTATCTGTAATTATG+AGG | 0.375043 | 1_4:-39959168 | Msa0162690:three_prime_UTR |
| GCCAGAACCGGAGCAGGAGC+AGG | 0.387573 | 1_4:-39961704 | Msa0162690:CDS |
| GCTGCTGCATTTCTCTGCCT+TGG | 0.390226 | 1_4:+39959236 | None:intergenic |
| CCGAAGGAGGAGGAGGTGAC+GGG | 0.392162 | 1_4:+39959635 | None:intergenic |
| GAAGAAGTTGAAGGATTCAA+TGG | 0.401659 | 1_4:-39961369 | Msa0162690:CDS |
| GTGCGTGCGTGTGGCGTGTT+TGG | 0.402265 | 1_4:+39961978 | None:intergenic |
| GACGGTGCCGGAGCCAGAAC+CGG | 0.410075 | 1_4:-39961716 | Msa0162690:CDS |
| TTGTATTGCTTTCTGAAGAA+AGG | 0.420761 | 1_4:+39960032 | None:intergenic |
| ACAGTTTCAAGGTGAGCAAT+TGG | 0.421621 | 1_4:-39959884 | Msa0162690:CDS |
| AAAAGACGATTTAAAAGAGT+TGG | 0.430342 | 1_4:-39961636 | Msa0162690:CDS |
| TTATGAGGGTAAATATGATA+TGG | 0.432575 | 1_4:-39959153 | Msa0162690:three_prime_UTR |
| TCGGGTGGTACTTAATCTTA+GGG | 0.433403 | 1_4:-39959616 | Msa0162690:exon |
| TATTATTTCAATCCATGAAA+AGG | 0.435772 | 1_4:-39959496 | Msa0162690:three_prime_UTR |
| ACGAGGAGTTCGGTGGTGAA+TGG | 0.443962 | 1_4:-39961398 | Msa0162690:CDS |
| CCTTGCAGTTTGTAACTGTT+CGG | 0.445129 | 1_4:+39959810 | None:intergenic |
| CCCGAAGGAGGAGGAGGTGA+CGG | 0.445219 | 1_4:+39959634 | None:intergenic |
| TAAAAGAAGAAACTTCGTAT+TGG | 0.446868 | 1_4:+39962003 | None:intergenic |
| AAAGATCTAATGCGGCGAAC+CGG | 0.447098 | 1_4:-39961460 | Msa0162690:CDS |
| TCCTGCTCCGGTTCTGGCTC+CGG | 0.449585 | 1_4:+39961709 | None:intergenic |
| CGAGGAGTTCGGTGGTGAAT+GGG | 0.450137 | 1_4:-39961397 | Msa0162690:CDS |
| TAAAATGATGGAGTAGGATA+AGG | 0.450953 | 1_4:+39961922 | None:intergenic |
| GAATTTGGAAGGGTGTGGAC+CGG | 0.454152 | 1_4:-39961438 | Msa0162690:CDS |
| GCTCTGATGTTTATCTATCA+TGG | 0.456298 | 1_4:-39959050 | Msa0162690:three_prime_UTR |
| AATGATAGTGGAGGCGGTGG+GGG | 0.457534 | 1_4:-39959685 | Msa0162690:CDS |
| CTAGAAAGGAATGGTTGGTT+GGG | 0.457734 | 1_4:-39959446 | Msa0162690:three_prime_UTR |
| ACCAGAGAAACACAAGGAAA+TGG | 0.460665 | 1_4:-39959783 | Msa0162690:CDS |
| TCTACCTCCTGCTCCTGCTC+CGG | 0.464831 | 1_4:+39961697 | None:intergenic |
| TGGAGTAGGATAAGGAGAAT+GGG | 0.466872 | 1_4:+39961930 | None:intergenic |
| TCAATGGATATTTAAAATGA+TGG | 0.468753 | 1_4:+39961910 | None:intergenic |
| GTCGGACCGGACGAGGAGTT+CGG | 0.470451 | 1_4:-39961408 | Msa0162690:CDS |
| CCATGGCAACATAATGATAG+TGG | 0.472933 | 1_4:-39959697 | Msa0162690:CDS |
| CATAATGATAGTGGAGGCGG+TGG | 0.476400 | 1_4:-39959688 | Msa0162690:CDS |
| AAGCAATACAAGAACAAGGC+AGG | 0.476831 | 1_4:-39960020 | Msa0162690:CDS |
| CTTGATCTATTGATCTCTAC+TGG | 0.477120 | 1_4:-39961245 | Msa0162690:intron |
| GCCGGAGCCAGAACCGGAGC+AGG | 0.479795 | 1_4:-39961710 | Msa0162690:CDS |
| ATTTCAATCCATGAAAAGGT+TGG | 0.480852 | 1_4:-39959492 | Msa0162690:three_prime_UTR |
| CCACTATCATTATGTTGCCA+TGG | 0.481591 | 1_4:+39959697 | None:intergenic |
| AGTTTCTGTGGCGTTGAAGA+AGG | 0.484796 | 1_4:-39961516 | Msa0162690:CDS |
| ACAGTTATGGTACAGTTTCA+AGG | 0.486936 | 1_4:-39959895 | Msa0162690:CDS |
| CGAAGGAGGAGGAGGTGACG+GGG | 0.489563 | 1_4:+39959636 | None:intergenic |
| AAGGACAGAAGCGCGTTGAT+TGG | 0.490740 | 1_4:+39962046 | None:intergenic |
| AAATTAACAAATTCATTGGA+TGG | 0.491817 | 1_4:+39959208 | None:intergenic |
| TCGATGACGTGGTGCCGGTC+CGG | 0.492087 | 1_4:+39961746 | None:intergenic |
| GACCGGGTTCGTCGTCGGAC+CGG | 0.493595 | 1_4:-39961421 | Msa0162690:CDS |
| TCTAGAAAGGAATGGTTGGT+TGG | 0.494379 | 1_4:-39959447 | Msa0162690:three_prime_UTR |
| CGTTAGTCTTAGAAAGTCGT+TGG | 0.499008 | 1_4:+39961603 | None:intergenic |
| ATGGAGTAGGATAAGGAGAA+TGG | 0.502048 | 1_4:+39961929 | None:intergenic |
| AATTTGGAAGGGTGTGGACC+GGG | 0.502653 | 1_4:-39961437 | Msa0162690:CDS |
| TGATATGGTGCCATATATGA+AGG | 0.506197 | 1_4:-39959138 | Msa0162690:three_prime_UTR |
| TCATCTCGATGACGTGGTGC+CGG | 0.507346 | 1_4:+39961741 | None:intergenic |
| GTCCGGTCCGACGACGAACC+CGG | 0.508930 | 1_4:+39961419 | None:intergenic |
| AGATCAAGAGTCTTATCATC+AGG | 0.511696 | 1_4:+39961260 | None:intergenic |
| CTTGATCGTGGTTCTTGCCA+CGG | 0.525394 | 1_4:-39959725 | Msa0162690:CDS |
| GTTCCTCGACATGACAGTTA+TGG | 0.527074 | 1_4:-39959908 | Msa0162690:CDS |
| GTGGGGTCTGTAATCTAGAA+AGG | 0.527411 | 1_4:-39959460 | Msa0162690:three_prime_UTR |
| CTGTCATGTCGAGGAACACT+TGG | 0.530452 | 1_4:+39959914 | None:intergenic |
| AATTAACAAATTCATTGGAT+GGG | 0.531430 | 1_4:+39959209 | None:intergenic |
| GTTCGTCGTCGGACCGGACG+AGG | 0.534035 | 1_4:-39961415 | Msa0162690:CDS |
| TAATACCGCGTGCGTGCGTG+TGG | 0.537128 | 1_4:+39961969 | None:intergenic |
| TGGGTTGAAGAAGAAGTTGA+AGG | 0.539071 | 1_4:-39961378 | Msa0162690:CDS |
| GACTAACGAACAAACCAAAA+CGG | 0.539854 | 1_4:-39961588 | Msa0162690:CDS |
| GAAGCTGAAGCTGGAGGCGT+TGG | 0.540329 | 1_4:-39961483 | Msa0162690:CDS |
| TAGTCTTAGAAAGTCGTTGG+TGG | 0.541554 | 1_4:+39961606 | None:intergenic |
| TCACCACCGAACTCCTCGTC+CGG | 0.541854 | 1_4:+39961402 | None:intergenic |
| GAAGGAGCTTCGTTCACGTA+TGG | 0.543242 | 1_4:-39961546 | Msa0162690:CDS |
| GAAGATGGTGAAGCTGAAGC+TGG | 0.544305 | 1_4:-39961492 | Msa0162690:CDS |
| GATATTTAAAATGATGGAGT+AGG | 0.546377 | 1_4:+39961916 | None:intergenic |
| GCATGACGCTGTCAAAGACT+TGG | 0.549313 | 1_4:-39959959 | Msa0162690:CDS |
| GATTGAAATAATAAAACTGT+AGG | 0.549854 | 1_4:+39959506 | None:intergenic |
| TAATGATAGTGGAGGCGGTG+GGG | 0.551632 | 1_4:-39959686 | Msa0162690:CDS |
| GCGGCGAACCGGAATTTGGA+AGG | 0.552312 | 1_4:-39961449 | Msa0162690:CDS |
| AACCGGAATTTGGAAGGGTG+TGG | 0.552955 | 1_4:-39961443 | Msa0162690:CDS |
| ACGAGCTCGCCCTCGCCACA+TGG | 0.555170 | 1_4:+39959848 | None:intergenic |
| GTAATCTAGAAAGGAATGGT+TGG | 0.557247 | 1_4:-39959451 | Msa0162690:three_prime_UTR |
| AGAACCGGAGCAGGAGCAGG+AGG | 0.558904 | 1_4:-39961701 | Msa0162690:CDS |
| ATCTGTATCTGTAATTATGA+GGG | 0.559085 | 1_4:-39959167 | Msa0162690:three_prime_UTR |
| GTGAAGAAGTTTCACCGGAC+CGG | 0.559293 | 1_4:-39961760 | Msa0162690:CDS |
| GGAGTAGGATAAGGAGAATG+GGG | 0.559905 | 1_4:+39961931 | None:intergenic |
| ATCGAGATGACAGACGGTGC+CGG | 0.560503 | 1_4:-39961728 | Msa0162690:CDS |
| AGCAATACAAGAACAAGGCA+GGG | 0.564896 | 1_4:-39960019 | Msa0162690:CDS |
| TAAGTACCACCCGAAGGAGG+AGG | 0.565613 | 1_4:+39959625 | None:intergenic |
| GTGTGGACCGGGTTCGTCGT+CGG | 0.566796 | 1_4:-39961426 | Msa0162690:CDS |
| AGACTTGGAGAAGAGTCTAC+TGG | 0.566833 | 1_4:-39959944 | Msa0162690:CDS |
| AAAGAAGATAATTTATTACC+CGG | 0.567500 | 1_4:+39959288 | None:intergenic |
| GTACCACCCGAAGGAGGAGG+AGG | 0.568216 | 1_4:+39959628 | None:intergenic |
| ATTGATCATTGTCTTGATCG+TGG | 0.570829 | 1_4:-39959737 | Msa0162690:CDS |
| GGCGTTGAAGAAGGCGAAGA+TGG | 0.575371 | 1_4:-39961507 | Msa0162690:CDS |
| CAACATAATGATAGTGGAGG+CGG | 0.579137 | 1_4:-39959691 | Msa0162690:CDS |
| AAAACGGTTCACGATGCTAA+AGG | 0.580222 | 1_4:-39961572 | Msa0162690:CDS |
| CCGTAGTGAAGAAGTTTCAC+CGG | 0.580387 | 1_4:-39961765 | Msa0162690:CDS |
| AAATTCTTCGACGACGTCGA+AGG | 0.582409 | 1_4:-39961662 | Msa0162690:CDS |
| TGATAGATAAACATCAGAGC+AGG | 0.584636 | 1_4:+39959053 | None:intergenic |
| ATAATGATAGTGGAGGCGGT+GGG | 0.590164 | 1_4:-39959687 | Msa0162690:CDS |
| TTATAACCTTAAACAATGCA+AGG | 0.592131 | 1_4:+39959002 | None:intergenic |
| TTGGAAGGGTGTGACTAACA+TGG | 0.595421 | 1_4:-39959534 | Msa0162690:three_prime_UTR |
| AAAAGGTTGGATGATGAATG+TGG | 0.601396 | 1_4:-39959479 | Msa0162690:three_prime_UTR |
| GTCTGTAATCTAGAAAGGAA+TGG | 0.602221 | 1_4:-39959455 | Msa0162690:three_prime_UTR |
| GCAATACAAGAACAAGGCAG+GGG | 0.603864 | 1_4:-39960018 | Msa0162690:CDS |
| AAAGGTTGGATGATGAATGT+GGG | 0.611605 | 1_4:-39959478 | Msa0162690:three_prime_UTR |
| TATCGAGAGCCATGTGGCGA+GGG | 0.613532 | 1_4:-39959857 | Msa0162690:CDS |
| GCAAATGCTGCAAATTCACA+AGG | 0.613796 | 1_4:+39959090 | None:intergenic |
| TCACGATGCTAAAGGAGTGA+AGG | 0.617381 | 1_4:-39961564 | Msa0162690:CDS |
| GAAGGAGGAGGAGGTGACGG+GGG | 0.620690 | 1_4:+39959637 | None:intergenic |
| GCGAGCTCGTTTGTGCACAC+TGG | 0.621398 | 1_4:-39959835 | Msa0162690:CDS |
| CGTCGTCGAAGAATTTGTCG+AGG | 0.622912 | 1_4:+39961669 | None:intergenic |
| ATATCGAGAGCCATGTGGCG+AGG | 0.623389 | 1_4:-39959858 | Msa0162690:CDS |
| CAGAAAGCAATACAAGAACA+AGG | 0.623990 | 1_4:-39960024 | Msa0162690:CDS |
| TTCTTGCCACGGTGAAACCA+TGG | 0.631742 | 1_4:-39959714 | Msa0162690:CDS |
| GATGGTGAAGCTGAAGCTGG+AGG | 0.632553 | 1_4:-39961489 | Msa0162690:CDS |
| AAAATGAACAACTTATTCAG+CGG | 0.633088 | 1_4:-39961803 | Msa0162690:CDS |
| TCACCTCCTCCTCCTTCGGG+TGG | 0.636070 | 1_4:-39959631 | Msa0162690:CDS |
| GAGACAAGTTCAAACTGTGA+AGG | 0.642814 | 1_4:+39962027 | None:intergenic |
| GATATGGTGCCATATATGAA+GGG | 0.643445 | 1_4:-39959137 | Msa0162690:three_prime_UTR |
| CGGCGAACCGGAATTTGGAA+GGG | 0.647953 | 1_4:-39961448 | Msa0162690:CDS |
| TATGGACGAAGAAGTTTCTG+TGG | 0.652355 | 1_4:-39961528 | Msa0162690:CDS |
| CGTCTGTCATCTCGATGACG+TGG | 0.652928 | 1_4:+39961735 | None:intergenic |
| GAGTAGGATAAGGAGAATGG+GGG | 0.654765 | 1_4:+39961932 | None:intergenic |
| CCGAACAGTTACAAACTGCA+AGG | 0.655391 | 1_4:-39959810 | Msa0162690:CDS |
| GATTAAGTACCACCCGAAGG+AGG | 0.656702 | 1_4:+39959622 | None:intergenic |
| CCGGTGAAACTTCTTCACTA+CGG | 0.658758 | 1_4:+39961765 | None:intergenic |
| CACGTCATCGAGATGACAGA+CGG | 0.659715 | 1_4:-39961734 | Msa0162690:CDS |
| GGCGTTGGAAAGATCTAATG+CGG | 0.661113 | 1_4:-39961468 | Msa0162690:CDS |
| GTACCATAACTGTCATGTCG+AGG | 0.662556 | 1_4:+39959905 | None:intergenic |
| CCATCAATGAAATTCAAGAG+AGG | 0.665676 | 1_4:-39959981 | Msa0162690:CDS |
| TGTGAGGCTCAATTAAACCA+AGG | 0.667282 | 1_4:-39959253 | Msa0162690:three_prime_UTR |
| TTTGCGTGAAGTTATTACGA+CGG | 0.672599 | 1_4:-39961333 | Msa0162690:CDS |
| AAGGTTGGATGATGAATGTG+GGG | 0.674223 | 1_4:-39959477 | Msa0162690:three_prime_UTR |
| TGGCAACATAATGATAGTGG+AGG | 0.674274 | 1_4:-39959694 | Msa0162690:CDS |
| GGACCGGACGAGGAGTTCGG+TGG | 0.678230 | 1_4:-39961405 | Msa0162690:CDS |
| ACACGCCACACGCACGCACG+CGG | 0.684322 | 1_4:-39961974 | Msa0162690:five_prime_UTR |
| TAAGATTAAGTACCACCCGA+AGG | 0.686561 | 1_4:+39959619 | None:intergenic |
| GGAAGCACCAGAGAAACACA+AGG | 0.690964 | 1_4:-39959789 | Msa0162690:CDS |
| ATGAAGGGTCATCTTCATCG+TGG | 0.725311 | 1_4:-39959122 | Msa0162690:three_prime_UTR |
| GGATGATATCGAGAGCCATG+TGG | 0.741101 | 1_4:-39959863 | Msa0162690:CDS |
| ATGTTGCCATGGTTTCACCG+TGG | 0.746888 | 1_4:+39959708 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTGATAAAAATTTATTAGT+AGG | - | chr1_4:39959982-39960001 | Msa0162690:CDS | 10.0% |
| !! | AAATTTATTAGTAGGTTAAT+TGG | - | chr1_4:39959990-39960009 | Msa0162690:CDS | 15.0% |
| !! | TACAAAATTAACAAATTCAT+TGG | + | chr1_4:39961872-39961891 | None:intergenic | 15.0% |
| !!! | TCAATGGATATTTAAAATGA+TGG | + | chr1_4:39959166-39959185 | None:intergenic | 20.0% |
| !!! | GTATGAATGTTTTAAAATCT+AGG | - | chr1_4:39959924-39959943 | Msa0162690:CDS | 20.0% |
| !!! | TTAATTGGTGTTTTAGATTA+TGG | - | chr1_4:39960005-39960024 | Msa0162690:CDS | 20.0% |
| !!! | TTTAAAGATAACTTGTTTGT+TGG | - | chr1_4:39960909-39960928 | Msa0162690:intron | 20.0% |
| !!! | TTAAAGATAACTTGTTTGTT+GGG | - | chr1_4:39960910-39960929 | Msa0162690:intron | 20.0% |
| !!! | TTTGTCTTTTAATTAAGTTC+AGG | - | chr1_4:39960957-39960976 | Msa0162690:intron | 20.0% |
| !!! | TAGAAGTATAATACAATAAC+AGG | + | chr1_4:39961317-39961336 | None:intergenic | 20.0% |
| !! | CTATAAACTTCTATGAATAT+TGG | - | chr1_4:39961495-39961514 | Msa0162690:CDS | 20.0% |
| !!! | ATTGGTTAAATCATGTTTTT+AGG | - | chr1_4:39961513-39961532 | Msa0162690:CDS | 20.0% |
| !! | GATTGAAATAATAAAACTGT+AGG | + | chr1_4:39961570-39961589 | None:intergenic | 20.0% |
| !! | TATTATTTCAATCCATGAAA+AGG | - | chr1_4:39961577-39961596 | Msa0162690:CDS | 20.0% |
| !! | AAAGAAGATAATTTATTACC+CGG | + | chr1_4:39961788-39961807 | None:intergenic | 20.0% |
| !! | AATTAACAAATTCATTGGAT+GGG | + | chr1_4:39961867-39961886 | None:intergenic | 20.0% |
| !! | AAATTAACAAATTCATTGGA+TGG | + | chr1_4:39961868-39961887 | None:intergenic | 20.0% |
| ! | TAAAAGAAGAAACTTCGTAT+TGG | + | chr1_4:39959073-39959092 | None:intergenic | 25.0% |
| !! | GATATTTAAAATGATGGAGT+AGG | + | chr1_4:39959160-39959179 | None:intergenic | 25.0% |
| ! | TGATCGAAAAATGTGTAATA+AGG | + | chr1_4:39959224-39959243 | None:intergenic | 25.0% |
| ! | AAAATGAACAACTTATTCAG+CGG | - | chr1_4:39959270-39959289 | Msa0162690:three_prime_UTR | 25.0% |
| ! | AAAAGACGATTTAAAAGAGT+TGG | - | chr1_4:39959437-39959456 | Msa0162690:three_prime_UTR | 25.0% |
| !! | TAGATTATGGATTATGTACT+AGG | - | chr1_4:39960018-39960037 | Msa0162690:CDS | 25.0% |
| ! | GAATGAAAAATAAACTGAAC+TGG | - | chr1_4:39960076-39960095 | Msa0162690:intron | 25.0% |
| ! | TTGATATAAAACTACAAGTG+AGG | - | chr1_4:39960114-39960133 | Msa0162690:intron | 25.0% |
| !!! | AAATCATGTTTTTAGGATCT+TGG | - | chr1_4:39961520-39961539 | Msa0162690:CDS | 25.0% |
| ! | ATCTGTATCTGTAATTATGA+GGG | - | chr1_4:39961906-39961925 | Msa0162690:five_prime_UTR | 25.0% |
| ! | TTATGAGGGTAAATATGATA+TGG | - | chr1_4:39961920-39961939 | Msa0162690:five_prime_UTR | 25.0% |
| ! | TTATAACCTTAAACAATGCA+AGG | + | chr1_4:39962074-39962093 | None:intergenic | 25.0% |
| ! | TAAAATGATGGAGTAGGATA+AGG | + | chr1_4:39959154-39959173 | None:intergenic | 30.0% |
| !!! | AGAAAGAGTTTTGAAGTCAA+TGG | + | chr1_4:39959182-39959201 | None:intergenic | 30.0% |
| TGAAAAATAAACTGAACTGG+TGG | - | chr1_4:39960079-39960098 | Msa0162690:intron | 30.0% | |
| TAACAAAACTGAATGTCAAC+CGG | + | chr1_4:39960256-39960275 | None:intergenic | 30.0% | |
| ! | TTGTATTGCTTTCTGAAGAA+AGG | + | chr1_4:39961044-39961063 | None:intergenic | 30.0% |
| !!! | ATGTTTTTAGGATCTTGGAA+GGG | - | chr1_4:39961525-39961544 | Msa0162690:CDS | 30.0% |
| ATTTCAATCCATGAAAAGGT+TGG | - | chr1_4:39961581-39961600 | Msa0162690:CDS | 30.0% | |
| ! | TTTTTCTGTAAGTATCATGC+TGG | - | chr1_4:39961702-39961721 | Msa0162690:CDS | 30.0% |
| !! | TTTTGATCAGTTGCTTTGTT+TGG | - | chr1_4:39961731-39961750 | Msa0162690:CDS | 30.0% |
| ! | TCGTTTTACATAGTACAATC+CGG | - | chr1_4:39961766-39961785 | Msa0162690:CDS | 30.0% |
| !! | CTTTGCTTTTACAATTTGTG+AGG | - | chr1_4:39961804-39961823 | Msa0162690:exon | 30.0% |
| CATCTGTATCTGTAATTATG+AGG | - | chr1_4:39961905-39961924 | Msa0162690:five_prime_UTR | 30.0% | |
| GACTAACGAACAAACCAAAA+CGG | - | chr1_4:39959485-39959504 | Msa0162690:three_prime_UTR | 35.0% | |
| GAAGAAGTTGAAGGATTCAA+TGG | - | chr1_4:39959704-39959723 | Msa0162690:CDS | 35.0% | |
| TTTGCGTGAAGTTATTACGA+CGG | - | chr1_4:39959740-39959759 | Msa0162690:CDS | 35.0% | |
| !! | CGACGTTATTTTACTGTTAC+TGG | - | chr1_4:39959783-39959802 | Msa0162690:CDS | 35.0% |
| ! | AGATCAAGAGTCTTATCATC+AGG | + | chr1_4:39959816-39959835 | None:intergenic | 35.0% |
| CTTGATCTATTGATCTCTAC+TGG | - | chr1_4:39959828-39959847 | Msa0162690:CDS | 35.0% | |
| ! | ACATGATTTTCCTTAGTGTG+AGG | - | chr1_4:39960146-39960165 | Msa0162690:intron | 35.0% |
| TTACTAGTAACCTCACACTA+AGG | + | chr1_4:39960159-39960178 | None:intergenic | 35.0% | |
| TCAACACTTCTAATCTTCGA+AGG | - | chr1_4:39960195-39960214 | Msa0162690:intron | 35.0% | |
| TATTACCAGTGTCAACATGT+CGG | - | chr1_4:39960287-39960306 | Msa0162690:intron | 35.0% | |
| TGTCAACATGTCGGTATTTA+TGG | - | chr1_4:39960296-39960315 | Msa0162690:intron | 35.0% | |
| GTCAACATGTCGGTATTTAT+GGG | - | chr1_4:39960297-39960316 | Msa0162690:intron | 35.0% | |
| TTCCATGTAGTTAGATTCCT+TGG | - | chr1_4:39960477-39960496 | Msa0162690:intron | 35.0% | |
| ATCCAAGGAATCTAACTACA+TGG | + | chr1_4:39960482-39960501 | None:intergenic | 35.0% | |
| GATAGTTCAGTTCAGACTTT+GGG | + | chr1_4:39960595-39960614 | None:intergenic | 35.0% | |
| AGATAGTTCAGTTCAGACTT+TGG | + | chr1_4:39960596-39960615 | None:intergenic | 35.0% | |
| ! | AAACAAATTCTCTAGAAGCC+AGG | + | chr1_4:39960661-39960680 | None:intergenic | 35.0% |
| AAGATTCTCCAACATCAATG+AGG | + | chr1_4:39960793-39960812 | None:intergenic | 35.0% | |
| !! | AGATAACTTGTTTGTTGGGT+TGG | - | chr1_4:39960914-39960933 | Msa0162690:intron | 35.0% |
| CAGAAAGCAATACAAGAACA+AGG | - | chr1_4:39961049-39961068 | Msa0162690:intron | 35.0% | |
| CCTCTCTTGAATTTCATTGA+TGG | + | chr1_4:39961095-39961114 | None:intergenic | 35.0% | |
| CCATCAATGAAATTCAAGAG+AGG | - | chr1_4:39961092-39961111 | Msa0162690:intron | 35.0% | |
| ACAGTTATGGTACAGTTTCA+AGG | - | chr1_4:39961178-39961197 | Msa0162690:intron | 35.0% | |
| ATTGATCATTGTCTTGATCG+TGG | - | chr1_4:39961336-39961355 | Msa0162690:CDS | 35.0% | |
| !!! | CATGTTTTTAGGATCTTGGA+AGG | - | chr1_4:39961524-39961543 | Msa0162690:CDS | 35.0% |
| ! | TTCATCATCCAACCTTTTCA+TGG | + | chr1_4:39961592-39961611 | None:intergenic | 35.0% |
| AAAAGGTTGGATGATGAATG+TGG | - | chr1_4:39961594-39961613 | Msa0162690:CDS | 35.0% | |
| AAAGGTTGGATGATGAATGT+GGG | - | chr1_4:39961595-39961614 | Msa0162690:CDS | 35.0% | |
| GTCTGTAATCTAGAAAGGAA+TGG | - | chr1_4:39961618-39961637 | Msa0162690:CDS | 35.0% | |
| GTAATCTAGAAAGGAATGGT+TGG | - | chr1_4:39961622-39961641 | Msa0162690:CDS | 35.0% | |
| !!! | TTTGTTTTGAGGAGGACTTT+TGG | - | chr1_4:39961653-39961672 | Msa0162690:CDS | 35.0% |
| ! | CGTTTTACATAGTACAATCC+GGG | - | chr1_4:39961767-39961786 | Msa0162690:CDS | 35.0% |
| !! | TGATATGGTGCCATATATGA+AGG | - | chr1_4:39961935-39961954 | Msa0162690:five_prime_UTR | 35.0% |
| !! | GATATGGTGCCATATATGAA+GGG | - | chr1_4:39961936-39961955 | Msa0162690:five_prime_UTR | 35.0% |
| TGAAGATGACCCTTCATATA+TGG | + | chr1_4:39961948-39961967 | None:intergenic | 35.0% | |
| TGATAGATAAACATCAGAGC+AGG | + | chr1_4:39962023-39962042 | None:intergenic | 35.0% | |
| GCTCTGATGTTTATCTATCA+TGG | - | chr1_4:39962023-39962042 | Msa0162690:five_prime_UTR | 35.0% | |
| CTATGTCCTTGCATTGTTTA+AGG | - | chr1_4:39962065-39962084 | Msa0162690:five_prime_UTR | 35.0% | |
| GAGACAAGTTCAAACTGTGA+AGG | + | chr1_4:39959049-39959068 | None:intergenic | 40.0% | |
| TGGAGTAGGATAAGGAGAAT+GGG | + | chr1_4:39959146-39959165 | None:intergenic | 40.0% | |
| ATGGAGTAGGATAAGGAGAA+TGG | + | chr1_4:39959147-39959166 | None:intergenic | 40.0% | |
| ! | TAGTCTTAGAAAGTCGTTGG+TGG | + | chr1_4:39959470-39959489 | None:intergenic | 40.0% |
| !! | CGTTAGTCTTAGAAAGTCGT+TGG | + | chr1_4:39959473-39959492 | None:intergenic | 40.0% |
| ! | TTTAGCATCGTGAACCGTTT+TGG | + | chr1_4:39959502-39959521 | None:intergenic | 40.0% |
| AAAACGGTTCACGATGCTAA+AGG | - | chr1_4:39959501-39959520 | Msa0162690:three_prime_UTR | 40.0% | |
| TATGGACGAAGAAGTTTCTG+TGG | - | chr1_4:39959545-39959564 | Msa0162690:three_prime_UTR | 40.0% | |
| ! | TGGGTTGAAGAAGAAGTTGA+AGG | - | chr1_4:39959695-39959714 | Msa0162690:CDS | 40.0% |
| AAACTGAACTGGTGGAGAAT+TGG | - | chr1_4:39960087-39960106 | Msa0162690:intron | 40.0% | |
| AAATACCGACATGTTGACAC+TGG | + | chr1_4:39960295-39960314 | None:intergenic | 40.0% | |
| ATGTAACTGACCTCACTTAG+TGG | - | chr1_4:39960332-39960351 | Msa0162690:intron | 40.0% | |
| TGTAACTGACCTCACTTAGT+GGG | - | chr1_4:39960333-39960352 | Msa0162690:intron | 40.0% | |
| TCACTTAGTGGGATAAGACT+GGG | - | chr1_4:39960344-39960363 | Msa0162690:intron | 40.0% | |
| ! | CTATTGACTGAGTGAATCCA+AGG | + | chr1_4:39960497-39960516 | None:intergenic | 40.0% |
| ATGAGGATTTCCTGCATTCA+CGG | + | chr1_4:39960776-39960795 | None:intergenic | 40.0% | |
| CAGGAAATCCTCATTGATGT+TGG | - | chr1_4:39960782-39960801 | Msa0162690:intron | 40.0% | |
| ATCTACATGTATCATGCCAC+CGG | + | chr1_4:39960841-39960860 | None:intergenic | 40.0% | |
| TGTGAGTTTCACTTTGATGC+AGG | - | chr1_4:39961007-39961026 | Msa0162690:intron | 40.0% | |
| AAGCAATACAAGAACAAGGC+AGG | - | chr1_4:39961053-39961072 | Msa0162690:intron | 40.0% | |
| AGCAATACAAGAACAAGGCA+GGG | - | chr1_4:39961054-39961073 | Msa0162690:intron | 40.0% | |
| ACAGTTTCAAGGTGAGCAAT+TGG | - | chr1_4:39961189-39961208 | Msa0162690:intron | 40.0% | |
| CCTTGCAGTTTGTAACTGTT+CGG | + | chr1_4:39961266-39961285 | None:intergenic | 40.0% | |
| ACCAGAGAAACACAAGGAAA+TGG | - | chr1_4:39961290-39961309 | Msa0162690:CDS | 40.0% | |
| TCCATTTCCTTGTGTTTCTC+TGG | + | chr1_4:39961294-39961313 | None:intergenic | 40.0% | |
| CCACTATCATTATGTTGCCA+TGG | + | chr1_4:39961379-39961398 | None:intergenic | 40.0% | |
| CCATGGCAACATAATGATAG+TGG | - | chr1_4:39961376-39961395 | Msa0162690:CDS | 40.0% | |
| !! | TGGCAACATAATGATAGTGG+AGG | - | chr1_4:39961379-39961398 | Msa0162690:CDS | 40.0% |
| !! | CAACATAATGATAGTGGAGG+CGG | - | chr1_4:39961382-39961401 | Msa0162690:CDS | 40.0% |
| TAAGATTAAGTACCACCCGA+AGG | + | chr1_4:39961457-39961476 | None:intergenic | 40.0% | |
| TTCGGGTGGTACTTAATCTT+AGG | - | chr1_4:39961456-39961475 | Msa0162690:CDS | 40.0% | |
| TCGGGTGGTACTTAATCTTA+GGG | - | chr1_4:39961457-39961476 | Msa0162690:CDS | 40.0% | |
| AAGGTTGGATGATGAATGTG+GGG | - | chr1_4:39961596-39961615 | Msa0162690:CDS | 40.0% | |
| TCTAGAAAGGAATGGTTGGT+TGG | - | chr1_4:39961626-39961645 | Msa0162690:CDS | 40.0% | |
| ! | CTAGAAAGGAATGGTTGGTT+GGG | - | chr1_4:39961627-39961646 | Msa0162690:CDS | 40.0% |
| !!! | TGGTTGGGTCTTTTGTTTTG+AGG | - | chr1_4:39961642-39961661 | Msa0162690:CDS | 40.0% |
| !!! | TTGGGTCTTTTGTTTTGAGG+AGG | - | chr1_4:39961645-39961664 | Msa0162690:CDS | 40.0% |
| TGTGAGGCTCAATTAAACCA+AGG | - | chr1_4:39961820-39961839 | Msa0162690:exon | 40.0% | |
| GCAAATGCTGCAAATTCACA+AGG | + | chr1_4:39961986-39962005 | None:intergenic | 40.0% | |
| GAGTAGGATAAGGAGAATGG+GGG | + | chr1_4:39959144-39959163 | None:intergenic | 45.0% | |
| GGAGTAGGATAAGGAGAATG+GGG | + | chr1_4:39959145-39959164 | None:intergenic | 45.0% | |
| CCGGTGAAACTTCTTCACTA+CGG | + | chr1_4:39959311-39959330 | None:intergenic | 45.0% | |
| CCGTAGTGAAGAAGTTTCAC+CGG | - | chr1_4:39959308-39959327 | Msa0162690:three_prime_UTR | 45.0% | |
| AAATTCTTCGACGACGTCGA+AGG | - | chr1_4:39959411-39959430 | Msa0162690:three_prime_UTR | 45.0% | |
| TCACGATGCTAAAGGAGTGA+AGG | - | chr1_4:39959509-39959528 | Msa0162690:three_prime_UTR | 45.0% | |
| ! | AGTTTCTGTGGCGTTGAAGA+AGG | - | chr1_4:39959557-39959576 | Msa0162690:three_prime_UTR | 45.0% |
| ! | GGCGTTGGAAAGATCTAATG+CGG | - | chr1_4:39959605-39959624 | Msa0162690:exon | 45.0% |
| AAAGATCTAATGCGGCGAAC+CGG | - | chr1_4:39959613-39959632 | Msa0162690:exon | 45.0% | |
| ! | TGTCTGATTCGTGTCAGTGT+CGG | - | chr1_4:39960227-39960246 | Msa0162690:intron | 45.0% |
| ! | CAGTCTTATCCCACTAAGTG+AGG | + | chr1_4:39960345-39960364 | None:intergenic | 45.0% |
| CTCACTTAGTGGGATAAGAC+TGG | - | chr1_4:39960343-39960362 | Msa0162690:intron | 45.0% | |
| TCTTGAAGAGATGTGCTACC+TGG | - | chr1_4:39960447-39960466 | Msa0162690:intron | 45.0% | |
| AGAGATGTGCTACCTGGATT+TGG | - | chr1_4:39960453-39960472 | Msa0162690:intron | 45.0% | |
| ACTACATGGAAGCCAAATCC+AGG | + | chr1_4:39960468-39960487 | None:intergenic | 45.0% | |
| ! | TCTACCGATTGTGTGAATGC+AGG | - | chr1_4:39960631-39960650 | Msa0162690:intron | 45.0% |
| ! | CTACCGATTGTGTGAATGCA+GGG | - | chr1_4:39960632-39960651 | Msa0162690:intron | 45.0% |
| ! | TACCGATTGTGTGAATGCAG+GGG | - | chr1_4:39960633-39960652 | Msa0162690:intron | 45.0% |
| ATCCCCTGCATTCACACAAT+CGG | + | chr1_4:39960638-39960657 | None:intergenic | 45.0% | |
| GCAATACAAGAACAAGGCAG+GGG | - | chr1_4:39961055-39961074 | Msa0162690:intron | 45.0% | |
| AGACTTGGAGAAGAGTCTAC+TGG | - | chr1_4:39961129-39961148 | Msa0162690:intron | 45.0% | |
| GTTCCTCGACATGACAGTTA+TGG | - | chr1_4:39961165-39961184 | Msa0162690:intron | 45.0% | |
| GTACCATAACTGTCATGTCG+AGG | + | chr1_4:39961171-39961190 | None:intergenic | 45.0% | |
| CCGAACAGTTACAAACTGCA+AGG | - | chr1_4:39961263-39961282 | Msa0162690:CDS | 45.0% | |
| !! | ATAATGATAGTGGAGGCGGT+GGG | - | chr1_4:39961386-39961405 | Msa0162690:CDS | 45.0% |
| ! | TTGGAAGGGTGTGACTAACA+TGG | - | chr1_4:39961539-39961558 | Msa0162690:CDS | 45.0% |
| GTGGGGTCTGTAATCTAGAA+AGG | - | chr1_4:39961613-39961632 | Msa0162690:CDS | 45.0% | |
| ATGAAGGGTCATCTTCATCG+TGG | - | chr1_4:39961951-39961970 | Msa0162690:five_prime_UTR | 45.0% | |
| ! | AAGGACAGAAGCGCGTTGAT+TGG | + | chr1_4:39959030-39959049 | None:intergenic | 50.0% |
| AGAATGGGGGTGGAATGTAG+AGG | + | chr1_4:39959131-39959150 | None:intergenic | 50.0% | |
| TAGGATAAGGAGAATGGGGG+TGG | + | chr1_4:39959141-39959160 | None:intergenic | 50.0% | |
| GTGAAGAAGTTTCACCGGAC+CGG | - | chr1_4:39959313-39959332 | Msa0162690:three_prime_UTR | 50.0% | |
| CACGTCATCGAGATGACAGA+CGG | - | chr1_4:39959339-39959358 | Msa0162690:three_prime_UTR | 50.0% | |
| CGTCGTCGAAGAATTTGTCG+AGG | + | chr1_4:39959407-39959426 | None:intergenic | 50.0% | |
| GAAGGAGCTTCGTTCACGTA+TGG | - | chr1_4:39959527-39959546 | Msa0162690:three_prime_UTR | 50.0% | |
| GAAGATGGTGAAGCTGAAGC+TGG | - | chr1_4:39959581-39959600 | Msa0162690:three_prime_UTR | 50.0% | |
| TAATGCGGCGAACCGGAATT+TGG | - | chr1_4:39959620-39959639 | Msa0162690:exon | 50.0% | |
| AACCGGAATTTGGAAGGGTG+TGG | - | chr1_4:39959630-39959649 | Msa0162690:CDS | 50.0% | |
| GTCCACACCCTTCCAAATTC+CGG | + | chr1_4:39959635-39959654 | None:intergenic | 50.0% | |
| ! | GAATTTGGAAGGGTGTGGAC+CGG | - | chr1_4:39959635-39959654 | Msa0162690:CDS | 50.0% |
| ! | AATTTGGAAGGGTGTGGACC+GGG | - | chr1_4:39959636-39959655 | Msa0162690:CDS | 50.0% |
| ! | TTCGTGTCAGTGTCGGATAC+CGG | - | chr1_4:39960234-39960253 | Msa0162690:intron | 50.0% |
| CACATGTATCATGCCGTGAG+AGG | + | chr1_4:39960713-39960732 | None:intergenic | 50.0% | |
| !! | ACTACTGACTCCGTGAATGC+AGG | - | chr1_4:39960763-39960782 | Msa0162690:intron | 50.0% |
| TCCTACCCTTGATAAGCCTC+CGG | - | chr1_4:39960819-39960838 | Msa0162690:intron | 50.0% | |
| TACATGTATCATGCCACCGG+AGG | + | chr1_4:39960838-39960857 | None:intergenic | 50.0% | |
| ACAAGGCAGGGGAAGAATTC+TGG | - | chr1_4:39961066-39961085 | Msa0162690:intron | 50.0% | |
| GCATGACGCTGTCAAAGACT+TGG | - | chr1_4:39961114-39961133 | Msa0162690:intron | 50.0% | |
| CTGTCATGTCGAGGAACACT+TGG | + | chr1_4:39961162-39961181 | None:intergenic | 50.0% | |
| GGATGATATCGAGAGCCATG+TGG | - | chr1_4:39961210-39961229 | Msa0162690:intron | 50.0% | |
| !! | GGAAGCACCAGAGAAACACA+AGG | - | chr1_4:39961284-39961303 | Msa0162690:CDS | 50.0% |
| CTTGATCGTGGTTCTTGCCA+CGG | - | chr1_4:39961348-39961367 | Msa0162690:CDS | 50.0% | |
| TTCTTGCCACGGTGAAACCA+TGG | - | chr1_4:39961359-39961378 | Msa0162690:CDS | 50.0% | |
| ATGTTGCCATGGTTTCACCG+TGG | + | chr1_4:39961368-39961387 | None:intergenic | 50.0% | |
| !! | CATAATGATAGTGGAGGCGG+TGG | - | chr1_4:39961385-39961404 | Msa0162690:CDS | 50.0% |
| !! | TAATGATAGTGGAGGCGGTG+GGG | - | chr1_4:39961387-39961406 | Msa0162690:CDS | 50.0% |
| GATTAAGTACCACCCGAAGG+AGG | + | chr1_4:39961454-39961473 | None:intergenic | 50.0% | |
| TCATCTCGATGACGTGGTGC+CGG | + | chr1_4:39959335-39959354 | None:intergenic | 55.0% | |
| CGTCTGTCATCTCGATGACG+TGG | + | chr1_4:39959341-39959360 | None:intergenic | 55.0% | |
| ATCGAGATGACAGACGGTGC+CGG | - | chr1_4:39959345-39959364 | Msa0162690:three_prime_UTR | 55.0% | |
| ! | GGCGTTGAAGAAGGCGAAGA+TGG | - | chr1_4:39959566-39959585 | Msa0162690:three_prime_UTR | 55.0% |
| GATGGTGAAGCTGAAGCTGG+AGG | - | chr1_4:39959584-39959603 | Msa0162690:three_prime_UTR | 55.0% | |
| CGGCGAACCGGAATTTGGAA+GGG | - | chr1_4:39959625-39959644 | Msa0162690:CDS | 55.0% | |
| ! | ACGAGGAGTTCGGTGGTGAA+TGG | - | chr1_4:39959675-39959694 | Msa0162690:CDS | 55.0% |
| ! | CGAGGAGTTCGGTGGTGAAT+GGG | - | chr1_4:39959676-39959695 | Msa0162690:CDS | 55.0% |
| TGTGTGAATGCAGGGGATCC+TGG | - | chr1_4:39960640-39960659 | Msa0162690:intron | 55.0% | |
| GTTCGAGGCTAATGGAGGGT+AGG | + | chr1_4:39960688-39960707 | None:intergenic | 55.0% | |
| GGCTGTTCGAGGCTAATGGA+GGG | + | chr1_4:39960692-39960711 | None:intergenic | 55.0% | |
| AGGCTGTTCGAGGCTAATGG+AGG | + | chr1_4:39960693-39960712 | None:intergenic | 55.0% | |
| GAGAGGCTGTTCGAGGCTAA+TGG | + | chr1_4:39960696-39960715 | None:intergenic | 55.0% | |
| TAGCCTCGAACAGCCTCTCA+CGG | - | chr1_4:39960697-39960716 | Msa0162690:intron | 55.0% | |
| ACCGGAGGCTTATCAAGGGT+AGG | + | chr1_4:39960823-39960842 | None:intergenic | 55.0% | |
| TACCCTTGATAAGCCTCCGG+TGG | - | chr1_4:39960822-39960841 | Msa0162690:intron | 55.0% | |
| TGCCACCGGAGGCTTATCAA+GGG | + | chr1_4:39960827-39960846 | None:intergenic | 55.0% | |
| ATGCCACCGGAGGCTTATCA+AGG | + | chr1_4:39960828-39960847 | None:intergenic | 55.0% | |
| ATATCGAGAGCCATGTGGCG+AGG | - | chr1_4:39961215-39961234 | Msa0162690:intron | 55.0% | |
| TATCGAGAGCCATGTGGCGA+GGG | - | chr1_4:39961216-39961235 | Msa0162690:intron | 55.0% | |
| !! | AATGATAGTGGAGGCGGTGG+GGG | - | chr1_4:39961388-39961407 | Msa0162690:CDS | 55.0% |
| TAAGTACCACCCGAAGGAGG+AGG | + | chr1_4:39961451-39961470 | None:intergenic | 55.0% | |
| GCTGCTGCATTTCTCTGCCT+TGG | + | chr1_4:39961840-39961859 | None:intergenic | 55.0% | |
| TAATACCGCGTGCGTGCGTG+TGG | + | chr1_4:39959107-39959126 | None:intergenic | 60.0% | |
| TCTACCTCCTGCTCCTGCTC+CGG | + | chr1_4:39959379-39959398 | None:intergenic | 60.0% | |
| ! | GAAGCTGAAGCTGGAGGCGT+TGG | - | chr1_4:39959590-39959609 | Msa0162690:three_prime_UTR | 60.0% |
| GCGGCGAACCGGAATTTGGA+AGG | - | chr1_4:39959624-39959643 | Msa0162690:CDS | 60.0% | |
| TCACCACCGAACTCCTCGTC+CGG | + | chr1_4:39959674-39959693 | None:intergenic | 60.0% | |
| ATGCCGTGAGAGGCTGTTCG+AGG | + | chr1_4:39960703-39960722 | None:intergenic | 60.0% | |
| GCGAGCTCGTTTGTGCACAC+TGG | - | chr1_4:39961238-39961257 | Msa0162690:intron | 60.0% | |
| GTGCGTGCGTGTGGCGTGTT+TGG | + | chr1_4:39959098-39959117 | None:intergenic | 65.0% | |
| !! | TCGATGACGTGGTGCCGGTC+CGG | + | chr1_4:39959330-39959349 | None:intergenic | 65.0% |
| !! | TCCTGCTCCGGTTCTGGCTC+CGG | + | chr1_4:39959367-39959386 | None:intergenic | 65.0% |
| TCCTGCTCCTGCTCCGGTTC+TGG | + | chr1_4:39959373-39959392 | None:intergenic | 65.0% | |
| AGAACCGGAGCAGGAGCAGG+AGG | - | chr1_4:39959372-39959391 | Msa0162690:three_prime_UTR | 65.0% | |
| GTGTGGACCGGGTTCGTCGT+CGG | - | chr1_4:39959647-39959666 | Msa0162690:CDS | 65.0% | |
| GTCGGACCGGACGAGGAGTT+CGG | - | chr1_4:39959665-39959684 | Msa0162690:CDS | 65.0% | |
| ! | GAAGGAGGAGGAGGTGACGG+GGG | + | chr1_4:39961439-39961458 | None:intergenic | 65.0% |
| CGAAGGAGGAGGAGGTGACG+GGG | + | chr1_4:39961440-39961459 | None:intergenic | 65.0% | |
| CCGAAGGAGGAGGAGGTGAC+GGG | + | chr1_4:39961441-39961460 | None:intergenic | 65.0% | |
| CCCGTCACCTCCTCCTCCTT+CGG | - | chr1_4:39961438-39961457 | Msa0162690:CDS | 65.0% | |
| CCCGAAGGAGGAGGAGGTGA+CGG | + | chr1_4:39961442-39961461 | None:intergenic | 65.0% | |
| CCGTCACCTCCTCCTCCTTC+GGG | - | chr1_4:39961439-39961458 | Msa0162690:CDS | 65.0% | |
| TCACCTCCTCCTCCTTCGGG+TGG | - | chr1_4:39961442-39961461 | Msa0162690:CDS | 65.0% | |
| GTACCACCCGAAGGAGGAGG+AGG | + | chr1_4:39961448-39961467 | None:intergenic | 65.0% | |
| ACACGCCACACGCACGCACG+CGG | - | chr1_4:39959099-39959118 | Msa0162690:three_prime_UTR | 70.0% | |
| ! | GACGGTGCCGGAGCCAGAAC+CGG | - | chr1_4:39959357-39959376 | Msa0162690:three_prime_UTR | 70.0% |
| GCCAGAACCGGAGCAGGAGC+AGG | - | chr1_4:39959369-39959388 | Msa0162690:three_prime_UTR | 70.0% | |
| GACCGGGTTCGTCGTCGGAC+CGG | - | chr1_4:39959652-39959671 | Msa0162690:CDS | 70.0% | |
| GTCCGGTCCGACGACGAACC+CGG | + | chr1_4:39959657-39959676 | None:intergenic | 70.0% | |
| GTTCGTCGTCGGACCGGACG+AGG | - | chr1_4:39959658-39959677 | Msa0162690:CDS | 70.0% | |
| GGACCGGACGAGGAGTTCGG+TGG | - | chr1_4:39959668-39959687 | Msa0162690:CDS | 70.0% | |
| ACGAGCTCGCCCTCGCCACA+TGG | + | chr1_4:39961228-39961247 | None:intergenic | 70.0% | |
| GGGGGAGTCTGTGCTGGAGC+AGG | + | chr1_4:39961421-39961440 | None:intergenic | 70.0% | |
| !! | GGTGACGGGGGAGTCTGTGC+TGG | + | chr1_4:39961427-39961446 | None:intergenic | 70.0% |
| GCCGGAGCCAGAACCGGAGC+AGG | - | chr1_4:39959363-39959382 | Msa0162690:three_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 39958994 | 39962101 | 39958994 | ID=Msa0162690;Name=Msa0162690 |
| chr1_4 | mRNA | 39958994 | 39962101 | 39958994 | ID=Msa0162690-mRNA-1;Parent=Msa0162690;Name=Msa0162690-mRNA-1;_AED=0.24;_eAED=0.24;_QI=279|1|1|1|1|1|2|630|339 |
| chr1_4 | exon | 39958994 | 39960066 | 39958994 | ID=Msa0162690-mRNA-1:exon:11584;Parent=Msa0162690-mRNA-1 |
| chr1_4 | exon | 39961246 | 39962101 | 39961246 | ID=Msa0162690-mRNA-1:exon:11583;Parent=Msa0162690-mRNA-1 |
| chr1_4 | five_prime_UTR | 39961823 | 39962101 | 39961823 | ID=Msa0162690-mRNA-1:five_prime_utr;Parent=Msa0162690-mRNA-1 |
| chr1_4 | CDS | 39961246 | 39961822 | 39961246 | ID=Msa0162690-mRNA-1:cds;Parent=Msa0162690-mRNA-1 |
| chr1_4 | CDS | 39959624 | 39960066 | 39959624 | ID=Msa0162690-mRNA-1:cds;Parent=Msa0162690-mRNA-1 |
| chr1_4 | three_prime_UTR | 39958994 | 39959623 | 39958994 | ID=Msa0162690-mRNA-1:three_prime_utr;Parent=Msa0162690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
