Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0119440 | sp|Q9ZSD4|SY121_ARATH | 67.246 | 345 | 97 | 4 | 1 | 335 | 1 | 339 | 1.04e-142 | 410 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0119440 | G7I8J4 | 97.067 | 341 | 8 | 1 | 1 | 341 | 1 | 339 | 0.0 | 683 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001380 | Msa0119440 | 0.833097 | 6.486897e-56 | -8.615850e-47 |
| Msa0001830 | Msa0119440 | 0.800337 | 1.511085e-48 | -8.615850e-47 |
| Msa0004480 | Msa0119440 | 0.815585 | 8.571647e-52 | -8.615850e-47 |
| Msa0011050 | Msa0119440 | 0.803375 | 3.592404e-49 | -8.615850e-47 |
| Msa0012100 | Msa0119440 | 0.833724 | 4.525294e-56 | -8.615850e-47 |
| Msa0012710 | Msa0119440 | 0.826260 | 2.990643e-54 | -8.615850e-47 |
| Msa0013280 | Msa0119440 | 0.806456 | 8.155729e-50 | -8.615850e-47 |
| Msa0015180 | Msa0119440 | 0.823579 | 1.283807e-53 | -8.615850e-47 |
| Msa0017320 | Msa0119440 | 0.824165 | 9.357053e-54 | -8.615850e-47 |
| Msa0030480 | Msa0119440 | 0.813870 | 2.056799e-51 | -8.615850e-47 |
| Msa0033850 | Msa0119440 | 0.863811 | 1.906629e-64 | -8.615850e-47 |
| Msa0035020 | Msa0119440 | 0.801775 | 7.677790e-49 | -8.615850e-47 |
| Msa0036540 | Msa0119440 | 0.810034 | 1.408983e-50 | -8.615850e-47 |
| Msa0048390 | Msa0119440 | 0.812854 | 3.438489e-51 | -8.615850e-47 |
| Msa0059900 | Msa0119440 | 0.804469 | 2.128198e-49 | -8.615850e-47 |
| Msa0059910 | Msa0119440 | 0.803261 | 3.793488e-49 | -8.615850e-47 |
| Msa0060070 | Msa0119440 | 0.854531 | 1.157274e-61 | -8.615850e-47 |
| Msa0061500 | Msa0119440 | 0.852686 | 3.921657e-61 | -8.615850e-47 |
| Msa0064140 | Msa0119440 | 0.802484 | 5.488213e-49 | -8.615850e-47 |
| Msa0071480 | Msa0119440 | 0.927846 | 6.646938e-92 | -8.615850e-47 |
| Msa0081620 | Msa0119440 | 0.852767 | 3.719246e-61 | -8.615850e-47 |
| Msa0081940 | Msa0119440 | 0.835863 | 1.309487e-56 | -8.615850e-47 |
| Msa0082050 | Msa0119440 | 0.825732 | 3.991913e-54 | -8.615850e-47 |
| Msa0084400 | Msa0119440 | 0.812317 | 4.505542e-51 | -8.615850e-47 |
| Msa0086560 | Msa0119440 | 0.840696 | 7.442412e-58 | -8.615850e-47 |
| Msa0092410 | Msa0119440 | 0.840043 | 1.102874e-57 | -8.615850e-47 |
| Msa0101020 | Msa0119440 | 0.805290 | 1.433368e-49 | -8.615850e-47 |
| Msa0106530 | Msa0119440 | 0.829448 | 5.118208e-55 | -8.615850e-47 |
| Msa0111080 | Msa0119440 | 0.816272 | 6.023893e-52 | -8.615850e-47 |
| Msa0119440 | Msa0128430 | 0.847267 | 1.288791e-59 | -8.615850e-47 |
| Msa0119440 | Msa0130720 | 0.801734 | 7.829984e-49 | -8.615850e-47 |
| Msa0119440 | Msa0133100 | 0.845000 | 5.334775e-59 | -8.615850e-47 |
| Msa0119440 | Msa0136630 | 0.888459 | 5.793019e-73 | -8.615850e-47 |
| Msa0119440 | Msa0137510 | 0.815470 | 9.094097e-52 | -8.615850e-47 |
| Msa0119440 | Msa0137800 | 0.806173 | 9.356473e-50 | -8.615850e-47 |
| Msa0119440 | Msa0138900 | 0.835758 | 1.392621e-56 | -8.615850e-47 |
| Msa0119440 | Msa0139000 | 0.846777 | 1.755000e-59 | -8.615850e-47 |
| Msa0119440 | Msa0139670 | 0.858621 | 7.265440e-63 | -8.615850e-47 |
| Msa0119440 | Msa0151220 | 0.825009 | 5.919312e-54 | -8.615850e-47 |
| Msa0119440 | Msa0152560 | 0.855174 | 7.529529e-62 | -8.615850e-47 |
| Msa0119440 | Msa0154920 | 0.820231 | 7.649435e-53 | -8.615850e-47 |
| Msa0119440 | Msa0155210 | 0.806240 | 9.054026e-50 | -8.615850e-47 |
| Msa0119440 | Msa0162690 | 0.936730 | 1.087664e-97 | -8.615850e-47 |
| Msa0119440 | Msa0171980 | 0.810503 | 1.115791e-50 | -8.615850e-47 |
| Msa0119440 | Msa0173960 | 0.849462 | 3.183862e-60 | -8.615850e-47 |
| Msa0119440 | Msa0176260 | 0.810882 | 9.242474e-51 | -8.615850e-47 |
| Msa0119440 | Msa0179100 | 0.838810 | 2.305411e-57 | -8.615850e-47 |
| Msa0119440 | Msa0183910 | 0.804494 | 2.102365e-49 | -8.615850e-47 |
| Msa0119440 | Msa0187310 | 0.855959 | 4.444371e-62 | -8.615850e-47 |
| Msa0119440 | Msa0187490 | 0.803643 | 3.160777e-49 | -8.615850e-47 |
| Msa0119440 | Msa0187830 | 0.847960 | 8.308865e-60 | -8.615850e-47 |
| Msa0119440 | Msa0189610 | 0.834635 | 2.675054e-56 | -8.615850e-47 |
| Msa0119440 | Msa0192640 | 0.818679 | 1.727971e-52 | -8.615850e-47 |
| Msa0119440 | Msa0194010 | 0.844453 | 7.488750e-59 | -8.615850e-47 |
| Msa0119440 | Msa0197530 | 0.815536 | 8.789789e-52 | -8.615850e-47 |
| Msa0119440 | Msa0201570 | 0.850651 | 1.479170e-60 | -8.615850e-47 |
| Msa0119440 | Msa0202930 | 0.845276 | 4.493392e-59 | -8.615850e-47 |
| Msa0119440 | Msa0213430 | 0.906439 | 1.482607e-80 | -8.615850e-47 |
| Msa0119440 | Msa0224130 | 0.830990 | 2.151338e-55 | -8.615850e-47 |
| Msa0119440 | Msa0228530 | 0.803264 | 3.788123e-49 | -8.615850e-47 |
| Msa0119440 | Msa0229360 | 0.811249 | 7.694634e-51 | -8.615850e-47 |
| Msa0119440 | Msa0235880 | 0.844858 | 5.828026e-59 | -8.615850e-47 |
| Msa0119440 | Msa0236070 | 0.815705 | 8.061096e-52 | -8.615850e-47 |
| Msa0119440 | Msa0239060 | 0.834733 | 2.527198e-56 | -8.615850e-47 |
| Msa0119440 | Msa0240270 | 0.860990 | 1.404405e-63 | -8.615850e-47 |
| Msa0119440 | Msa0244140 | 0.804861 | 1.763000e-49 | -8.615850e-47 |
| Msa0119440 | Msa0244190 | 0.813888 | 2.037288e-51 | -8.615850e-47 |
| Msa0119440 | Msa0245540 | 0.807510 | 4.880772e-50 | -8.615850e-47 |
| Msa0119440 | Msa0259440 | 0.851577 | 8.103943e-61 | -8.615850e-47 |
| Msa0119440 | Msa0259580 | 0.846305 | 2.361106e-59 | -8.615850e-47 |
| Msa0119440 | Msa0265270 | 0.823074 | 1.684528e-53 | -8.615850e-47 |
| Msa0119440 | Msa0269560 | 0.821633 | 3.639383e-53 | -8.615850e-47 |
| Msa0119440 | Msa0271550 | 0.801467 | 8.882590e-49 | -8.615850e-47 |
| Msa0119440 | Msa0276430 | 0.814286 | 1.664944e-51 | -8.615850e-47 |
| Msa0119440 | Msa0277410 | 0.805243 | 1.466836e-49 | -8.615850e-47 |
| Msa0119440 | Msa0282720 | 0.867048 | 1.823011e-65 | -8.615850e-47 |
| Msa0119440 | Msa0284240 | 0.806049 | 9.932777e-50 | -8.615850e-47 |
| Msa0119440 | Msa0284450 | 0.848315 | 6.629444e-60 | -8.615850e-47 |
| Msa0119440 | Msa0305620 | 0.870625 | 1.267002e-66 | -8.615850e-47 |
| Msa0119440 | Msa0311470 | 0.815523 | 8.851915e-52 | -8.615850e-47 |
| Msa0119440 | Msa0312910 | 0.814150 | 1.784049e-51 | -8.615850e-47 |
| Msa0119440 | Msa0314000 | 0.809150 | 2.181654e-50 | -8.615850e-47 |
| Msa0119440 | Msa0319290 | 0.844196 | 8.779056e-59 | -8.615850e-47 |
| Msa0119440 | Msa0322680 | 0.836578 | 8.620779e-57 | -8.615850e-47 |
| Msa0119440 | Msa0330880 | 0.806129 | 9.555986e-50 | -8.615850e-47 |
| Msa0119440 | Msa0347750 | 0.858344 | 8.787894e-63 | -8.615850e-47 |
| Msa0119440 | Msa0358110 | 0.873542 | 1.356685e-67 | -8.615850e-47 |
| Msa0119440 | Msa0358120 | 0.862736 | 4.102559e-64 | -8.615850e-47 |
| Msa0119440 | Msa0364790 | 0.871994 | 4.470968e-67 | -8.615850e-47 |
| Msa0119440 | Msa0369920 | 0.805168 | 1.520335e-49 | -8.615850e-47 |
| Msa0119440 | Msa0377840 | 0.805706 | 1.172677e-49 | -8.615850e-47 |
| Msa0119440 | Msa0380600 | 0.887653 | 1.181311e-72 | -8.615850e-47 |
| Msa0119440 | Msa0382370 | 0.840686 | 7.486878e-58 | -8.615850e-47 |
| Msa0119440 | Msa0382490 | 0.816022 | 6.849097e-52 | -8.615850e-47 |
| Msa0119440 | Msa0386010 | 0.800562 | 1.359625e-48 | -8.615850e-47 |
| Msa0119440 | Msa0388650 | 0.805912 | 1.061710e-49 | -8.615850e-47 |
| Msa0119440 | Msa0389210 | 0.821012 | 5.061407e-53 | -8.615850e-47 |
| Msa0119440 | Msa0394470 | 0.801755 | 7.750681e-49 | -8.615850e-47 |
| Msa0119440 | Msa0403490 | 0.823127 | 1.637337e-53 | -8.615850e-47 |
| Msa0119440 | Msa0403770 | 0.817520 | 3.160591e-52 | -8.615850e-47 |
| Msa0119440 | Msa0408340 | 0.818158 | 2.268095e-52 | -8.615850e-47 |
| Msa0119440 | Msa0412260 | 0.809084 | 2.253159e-50 | -8.615850e-47 |
| Msa0119440 | Msa0418400 | 0.885870 | 5.599663e-72 | -8.615850e-47 |
| Msa0119440 | Msa0418410 | 0.822986 | 1.765853e-53 | -8.615850e-47 |
| Msa0119440 | Msa0422180 | 0.810705 | 1.009330e-50 | -8.615850e-47 |
| Msa0119440 | Msa0426560 | 0.825814 | 3.817684e-54 | -8.615850e-47 |
| Msa0119440 | Msa0430240 | 0.888591 | 5.153661e-73 | -8.615850e-47 |
| Msa0119440 | Msa0432160 | 0.833491 | 5.173148e-56 | -8.615850e-47 |
| Msa0119440 | Msa0432670 | 0.814520 | 1.477736e-51 | -8.615850e-47 |
| Msa0119440 | Msa0437070 | 0.872896 | 2.234840e-67 | -8.615850e-47 |
| Msa0119440 | Msa0456770 | 0.842547 | 2.418765e-58 | -8.615850e-47 |
| Msa0119440 | Msa0463490 | 0.809992 | 1.438017e-50 | -8.615850e-47 |
| Msa0119440 | Msa0472710 | 0.874343 | 7.271436e-68 | -8.615850e-47 |
| Msa0119440 | Msa0472720 | 0.860900 | 1.495564e-63 | -8.615850e-47 |
| Msa0119440 | Msa0472760 | 0.820466 | 6.757839e-53 | -8.615850e-47 |
| Msa0119440 | Msa0472770 | 0.886253 | 4.016027e-72 | -8.615850e-47 |
| Msa0119440 | Msa0473140 | 0.811417 | 7.074281e-51 | -8.615850e-47 |
| Msa0119440 | Msa0476680 | 0.828910 | 6.911604e-55 | -8.615850e-47 |
| Msa0119440 | Msa0482180 | 0.815972 | 7.029143e-52 | -8.615850e-47 |
| Msa0119440 | Msa0482280 | 0.839878 | 1.217271e-57 | -8.615850e-47 |
| Msa0119440 | Msa0482940 | 0.852183 | 5.457595e-61 | -8.615850e-47 |
| Msa0119440 | Msa0484800 | 0.816147 | 6.423177e-52 | -8.615850e-47 |
| Msa0119440 | Msa0500400 | 0.861309 | 1.123477e-63 | -8.615850e-47 |
| Msa0119440 | Msa0514610 | 0.829243 | 5.741023e-55 | -8.615850e-47 |
| Msa0119440 | Msa0517610 | 0.816114 | 6.532555e-52 | -8.615850e-47 |
| Msa0119440 | Msa0518170 | 0.806615 | 7.546509e-50 | -8.615850e-47 |
| Msa0119440 | Msa0521010 | 0.829823 | 4.148053e-55 | -8.615850e-47 |
| Msa0119440 | Msa0524330 | 0.821516 | 3.873396e-53 | -8.615850e-47 |
| Msa0119440 | Msa0524440 | 0.828595 | 8.236348e-55 | -8.615850e-47 |
| Msa0119440 | Msa0534870 | 0.840446 | 8.654951e-58 | -8.615850e-47 |
| Msa0119440 | Msa0536160 | 0.818941 | 1.507371e-52 | -8.615850e-47 |
| Msa0119440 | Msa0538160 | 0.823791 | 1.144939e-53 | -8.615850e-47 |
| Msa0119440 | Msa0542470 | 0.807725 | 4.392972e-50 | -8.615850e-47 |
| Msa0119440 | Msa0569780 | 0.812365 | 4.398385e-51 | -8.615850e-47 |
| Msa0119440 | Msa0574600 | 0.803008 | 4.278032e-49 | -8.615850e-47 |
| Msa0119440 | Msa0576750 | 0.827306 | 1.682889e-54 | -8.615850e-47 |
| Msa0119440 | Msa0582280 | 0.815617 | 8.435143e-52 | -8.615850e-47 |
| Msa0119440 | Msa0583670 | 0.840591 | 7.927454e-58 | -8.615850e-47 |
| Msa0119440 | Msa0598520 | 0.805398 | 1.361213e-49 | -8.615850e-47 |
| Msa0119440 | Msa0613340 | 0.811624 | 6.377841e-51 | -8.615850e-47 |
| Msa0119440 | Msa0616450 | 0.845685 | 3.480258e-59 | -8.615850e-47 |
| Msa0119440 | Msa0629240 | 0.802945 | 4.409184e-49 | -8.615850e-47 |
| Msa0119440 | Msa0631320 | 0.838017 | 3.691949e-57 | -8.615850e-47 |
| Msa0119440 | Msa0638990 | 0.803091 | 4.112156e-49 | -8.615850e-47 |
| Msa0119440 | Msa0655920 | 0.827448 | 1.555519e-54 | -8.615850e-47 |
| Msa0119440 | Msa0658680 | 0.810607 | 1.059486e-50 | -8.615850e-47 |
| Msa0119440 | Msa0659790 | 0.840163 | 1.026106e-57 | -8.615850e-47 |
| Msa0119440 | Msa0689780 | 0.811624 | 6.379426e-51 | -8.615850e-47 |
| Msa0119440 | Msa0705990 | 0.819635 | 1.047119e-52 | -8.615850e-47 |
| Msa0119440 | Msa0707030 | 0.815517 | 8.876147e-52 | -8.615850e-47 |
| Msa0119440 | Msa0708310 | 0.821511 | 3.883433e-53 | -8.615850e-47 |
| Msa0119440 | Msa0709120 | 0.854743 | 1.004375e-61 | -8.615850e-47 |
| Msa0119440 | Msa0721340 | 0.828789 | 7.393347e-55 | -8.615850e-47 |
| Msa0119440 | Msa0724370 | 0.847443 | 1.152494e-59 | -8.615850e-47 |
| Msa0119440 | Msa0735550 | 0.824660 | 7.154887e-54 | -8.615850e-47 |
| Msa0119440 | Msa0742150 | 0.807584 | 4.706717e-50 | -8.615850e-47 |
| Msa0119440 | Msa0743530 | 0.809558 | 1.783608e-50 | -8.615850e-47 |
| Msa0119440 | Msa0743870 | 0.829745 | 4.334514e-55 | -8.615850e-47 |
| Msa0119440 | Msa0746170 | 0.818192 | 2.227971e-52 | -8.615850e-47 |
| Msa0119440 | Msa0746210 | 0.813929 | 1.995547e-51 | -8.615850e-47 |
| Msa0119440 | Msa0748660 | 0.899146 | 2.646096e-77 | -8.615850e-47 |
| Msa0119440 | Msa0750810 | 0.820539 | 6.503502e-53 | -8.615850e-47 |
| Msa0119440 | Msa0758250 | 0.835170 | 1.961173e-56 | -8.615850e-47 |
| Msa0119440 | Msa0764920 | 0.861147 | 1.257999e-63 | -8.615850e-47 |
| Msa0119440 | Msa0769720 | 0.850423 | 1.714666e-60 | -8.615850e-47 |
| Msa0119440 | Msa0775560 | 0.832747 | 7.921852e-56 | -8.615850e-47 |
| Msa0119440 | Msa0775920 | 0.856203 | 3.771113e-62 | -8.615850e-47 |
| Msa0119440 | Msa0776750 | 0.825373 | 4.857815e-54 | -8.615850e-47 |
| Msa0119440 | Msa0779260 | 0.802230 | 6.191473e-49 | -8.615850e-47 |
| Msa0119440 | Msa0786070 | 0.808925 | 2.437526e-50 | -8.615850e-47 |
| Msa0119440 | Msa0812950 | 0.845452 | 4.026742e-59 | -8.615850e-47 |
| Msa0119440 | Msa0813260 | 0.892931 | 1.006790e-74 | -8.615850e-47 |
| Msa0119440 | Msa0844610 | 0.851804 | 6.988802e-61 | -8.615850e-47 |
| Msa0119440 | Msa0853440 | 0.824194 | 9.213150e-54 | -8.615850e-47 |
| Msa0119440 | Msa0853810 | 0.880751 | 4.239978e-70 | -8.615850e-47 |
| Msa0119440 | Msa0855110 | 0.813723 | 2.216000e-51 | -8.615850e-47 |
| Msa0119440 | Msa0857300 | 0.815209 | 1.039599e-51 | -8.615850e-47 |
| Msa0119440 | Msa0860250 | 0.859311 | 4.515321e-63 | -8.615850e-47 |
| Msa0119440 | Msa0863720 | 0.833669 | 4.669072e-56 | -8.615850e-47 |
| Msa0119440 | Msa0865970 | 0.863170 | 3.013316e-64 | -8.615850e-47 |
| Msa0119440 | Msa0866070 | 0.856790 | 2.535662e-62 | -8.615850e-47 |
| Msa0119440 | Msa0877710 | 0.834121 | 3.600008e-56 | -8.615850e-47 |
| Msa0119440 | Msa0902830 | 0.802977 | 4.342765e-49 | -8.615850e-47 |
| Msa0119440 | Msa0921420 | 0.813651 | 2.297921e-51 | -8.615850e-47 |
| Msa0119440 | Msa0944610 | 0.808699 | 2.723455e-50 | -8.615850e-47 |
| Msa0119440 | Msa0945130 | 0.811809 | 5.814368e-51 | -8.615850e-47 |
| Msa0119440 | Msa0964960 | 0.819024 | 1.443340e-52 | -8.615850e-47 |
| Msa0119440 | Msa0968050 | 0.857616 | 1.445573e-62 | -8.615850e-47 |
| Msa0119440 | Msa0972810 | 0.811605 | 6.439653e-51 | -8.615850e-47 |
| Msa0119440 | Msa0973070 | 0.850334 | 1.816413e-60 | -8.615850e-47 |
| Msa0119440 | Msa0974950 | 0.804433 | 2.165576e-49 | -8.615850e-47 |
| Msa0119440 | Msa0982780 | 0.808248 | 3.400442e-50 | -8.615850e-47 |
| Msa0119440 | Msa0994370 | 0.807633 | 4.594385e-50 | -8.615850e-47 |
| Msa0119440 | Msa0994910 | 0.818896 | 1.543162e-52 | -8.615850e-47 |
| Msa0119440 | Msa0999160 | 0.814216 | 1.725147e-51 | -8.615850e-47 |
| Msa0119440 | Msa1011090 | 0.805818 | 1.110829e-49 | -8.615850e-47 |
| Msa0119440 | Msa1034700 | 0.842996 | 1.837885e-58 | -8.615850e-47 |
| Msa0119440 | Msa1043120 | 0.846593 | 1.969889e-59 | -8.615850e-47 |
| Msa0119440 | Msa1063370 | 0.838214 | 3.284196e-57 | -8.615850e-47 |
| Msa0119440 | Msa1063410 | 0.818910 | 1.531686e-52 | -8.615850e-47 |
| Msa0119440 | Msa1063420 | 0.817914 | 2.575492e-52 | -8.615850e-47 |
| Msa0119440 | Msa1074540 | 0.856942 | 2.286686e-62 | -8.615850e-47 |
| Msa0119440 | Msa1078330 | 0.841411 | 4.830060e-58 | -8.615850e-47 |
| Msa0119440 | Msa1093100 | 0.805102 | 1.570034e-49 | -8.615850e-47 |
| Msa0119440 | Msa1096070 | 0.824864 | 6.407204e-54 | -8.615850e-47 |
| Msa0119440 | Msa1098440 | 0.826569 | 2.524322e-54 | -8.615850e-47 |
| Msa0119440 | Msa1098460 | 0.805781 | 1.130755e-49 | -8.615850e-47 |
| Msa0119440 | Msa1100930 | 0.832709 | 8.097459e-56 | -8.615850e-47 |
| Msa0119440 | Msa1107200 | 0.806282 | 8.874790e-50 | -8.615850e-47 |
| Msa0119440 | Msa1108720 | 0.858505 | 7.866467e-63 | -8.615850e-47 |
| Msa0119440 | Msa1109810 | 0.809202 | 2.125628e-50 | -8.615850e-47 |
| Msa0119440 | Msa1115280 | 0.803402 | 3.547150e-49 | -8.615850e-47 |
| Msa0119440 | Msa1123720 | 0.870249 | 1.682446e-66 | -8.615850e-47 |
| Msa0119440 | Msa1138910 | 0.806791 | 6.930477e-50 | -8.615850e-47 |
| Msa0119440 | Msa1143020 | 0.809521 | 1.816113e-50 | -8.615850e-47 |
| Msa0119440 | Msa1152410 | 0.838435 | 2.880146e-57 | -8.615850e-47 |
| Msa0119440 | Msa1156820 | 0.826065 | 3.327642e-54 | -8.615850e-47 |
| Msa0119440 | Msa1169860 | 0.805203 | 1.495182e-49 | -8.615850e-47 |
| Msa0119440 | Msa1182130 | 0.801113 | 1.049643e-48 | -8.615850e-47 |
| Msa0119440 | Msa1184780 | 0.840119 | 1.053508e-57 | -8.615850e-47 |
| Msa0119440 | Msa1189970 | 0.824530 | 7.679266e-54 | -8.615850e-47 |
| Msa0119440 | Msa1200320 | 0.824739 | 6.856002e-54 | -8.615850e-47 |
| Msa0119440 | Msa1209190 | 0.826811 | 2.210396e-54 | -8.615850e-47 |
| Msa0119440 | Msa1209860 | 0.828885 | 7.009339e-55 | -8.615850e-47 |
| Msa0119440 | Msa1214170 | 0.827793 | 1.285522e-54 | -8.615850e-47 |
| Msa0119440 | Msa1218160 | 0.810979 | 8.806218e-51 | -8.615850e-47 |
| Msa0119440 | Msa1219150 | 0.817032 | 4.068479e-52 | -8.615850e-47 |
| Msa0119440 | Msa1220880 | 0.836556 | 8.729712e-57 | -8.615850e-47 |
| Msa0119440 | Msa1221330 | 0.808613 | 2.842077e-50 | -8.615850e-47 |
| Msa0119440 | Msa1225100 | 0.875022 | 4.272839e-68 | -8.615850e-47 |
| Msa0119440 | Msa1229480 | 0.812818 | 3.500719e-51 | -8.615850e-47 |
| Msa0119440 | Msa1234620 | 0.866125 | 3.583855e-65 | -8.615850e-47 |
| Msa0119440 | Msa1238680 | 0.829292 | 5.584430e-55 | -8.615850e-47 |
| Msa0119440 | Msa1238690 | 0.852550 | 4.290029e-61 | -8.615850e-47 |
| Msa0119440 | Msa1246700 | 0.825480 | 4.580848e-54 | -8.615850e-47 |
| Msa0119440 | Msa1253660 | 0.828544 | 8.476322e-55 | -8.615850e-47 |
| Msa0119440 | Msa1258370 | 0.811665 | 6.250426e-51 | -8.615850e-47 |
| Msa0119440 | Msa1258470 | 0.808953 | 2.403377e-50 | -8.615850e-47 |
| Msa0119440 | Msa1258670 | 0.842626 | 2.305248e-58 | -8.615850e-47 |
| Msa0119440 | Msa1259860 | 0.804863 | 1.761115e-49 | -8.615850e-47 |
| Msa0119440 | Msa1260680 | 0.829768 | 4.278966e-55 | -8.615850e-47 |
| Msa0119440 | Msa1261850 | 0.818617 | 1.785306e-52 | -8.615850e-47 |
| Msa0119440 | Msa1262020 | 0.823899 | 1.080319e-53 | -8.615850e-47 |
| Msa0119440 | Msa1266170 | 0.828932 | 6.829590e-55 | -8.615850e-47 |
| Msa0119440 | Msa1266330 | 0.806449 | 8.181315e-50 | -8.615850e-47 |
| Msa0119440 | Msa1270660 | 0.806671 | 7.343573e-50 | -8.615850e-47 |
| Msa0119440 | Msa1276970 | 0.805386 | 1.368679e-49 | -8.615850e-47 |
| Msa0119440 | Msa1277780 | 0.838172 | 3.367526e-57 | -8.615850e-47 |
| Msa0119440 | Msa1280150 | 0.862841 | 3.809041e-64 | -8.615850e-47 |
| Msa0119440 | Msa1280170 | 0.862853 | 3.776895e-64 | -8.615850e-47 |
| Msa0119440 | Msa1285200 | 0.906277 | 1.761705e-80 | -8.615850e-47 |
| Msa0119440 | Msa1307180 | 0.814662 | 1.374377e-51 | -8.615850e-47 |
| Msa0119440 | Msa1316360 | 0.803205 | 3.895991e-49 | -8.615850e-47 |
| Msa0119440 | Msa1316630 | 0.801717 | 7.891251e-49 | -8.615850e-47 |
| Msa0119440 | Msa1329870 | 0.874433 | 6.781603e-68 | -8.615850e-47 |
| Msa0119440 | Msa1332050 | 0.849243 | 3.665197e-60 | -8.615850e-47 |
| Msa0119440 | Msa1334400 | 0.801636 | 8.202398e-49 | -8.615850e-47 |
| Msa0119440 | Msa1335230 | 0.801105 | 1.053252e-48 | -8.615850e-47 |
| Msa0119440 | Msa1336040 | 0.800449 | 1.433707e-48 | -8.615850e-47 |
| Msa0119440 | Msa1349860 | 0.810381 | 1.185658e-50 | -8.615850e-47 |
| Msa0119440 | Msa1353890 | 0.829837 | 4.115732e-55 | -8.615850e-47 |
| Msa0119440 | Msa1355890 | 0.817462 | 3.257409e-52 | -8.615850e-47 |
| Msa0119440 | Msa1360020 | 0.824031 | 1.005869e-53 | -8.615850e-47 |
| Msa0119440 | Msa1361250 | 0.862684 | 4.256802e-64 | -8.615850e-47 |
| Msa0119440 | Msa1364080 | 0.815803 | 7.665721e-52 | -8.615850e-47 |
| Msa0119440 | Msa1364160 | 0.807173 | 5.751435e-50 | -8.615850e-47 |
| Msa0119440 | Msa1365270 | 0.804585 | 2.012848e-49 | -8.615850e-47 |
| Msa0119440 | Msa1365610 | 0.809108 | 2.227101e-50 | -8.615850e-47 |
| Msa0119440 | Msa1367530 | 0.838395 | 2.949908e-57 | -8.615850e-47 |
| Msa0119440 | Msa1370590 | 0.850669 | 1.462587e-60 | -8.615850e-47 |
| Msa0119440 | Msa1376450 | 0.830591 | 2.693880e-55 | -8.615850e-47 |
| Msa0119440 | Msa1384100 | 0.852264 | 5.172658e-61 | -8.615850e-47 |
| Msa0119440 | Msa1389760 | 0.862449 | 5.028078e-64 | -8.615850e-47 |
| Msa0119440 | Msa1391550 | 0.833603 | 4.850620e-56 | -8.615850e-47 |
| Msa0119440 | Msa1395730 | 0.802055 | 6.726911e-49 | -8.615850e-47 |
| Msa0119440 | Msa1400050 | 0.824874 | 6.371690e-54 | -8.615850e-47 |
| Msa0119440 | Msa1405220 | 0.876825 | 1.025872e-68 | -8.615850e-47 |
| Msa0119440 | Msa1408050 | 0.814390 | 1.578691e-51 | -8.615850e-47 |
| Msa0119440 | Msa1420270 | 0.816756 | 4.693320e-52 | -8.615850e-47 |
| Msa0119440 | Msa1421210 | 0.816050 | 6.751069e-52 | -8.615850e-47 |
| Msa0119440 | Msa1421900 | 0.891832 | 2.769311e-74 | -8.615850e-47 |
| Msa0119440 | Msa1422810 | 0.831046 | 2.084086e-55 | -8.615850e-47 |
| Msa0119440 | Msa1424350 | 0.809809 | 1.574718e-50 | -8.615850e-47 |
| Msa0119440 | Msa1424630 | 0.844558 | 7.019147e-59 | -8.615850e-47 |
| Msa0119440 | Msa1430130 | 0.837272 | 5.731192e-57 | -8.615850e-47 |
| Msa0119440 | Msa1430550 | 0.821624 | 3.656500e-53 | -8.615850e-47 |
| Msa0119440 | Msa1432130 | 0.804842 | 1.778917e-49 | -8.615850e-47 |
| Msa0119440 | Msa1444120 | 0.855427 | 6.355692e-62 | -8.615850e-47 |
| Msa0119440 | Msa1444260 | 0.807646 | 4.566811e-50 | -8.615850e-47 |
| Msa0119440 | Msa1454450 | 0.810971 | 8.840887e-51 | -8.615850e-47 |
| Msa0119440 | Msa1456230 | 0.803171 | 3.959802e-49 | -8.615850e-47 |
| Msa0119440 | Msa1457160 | 0.840391 | 8.944121e-58 | -8.615850e-47 |
| Msa0119440 | Msa1458340 | 0.826909 | 2.094730e-54 | -8.615850e-47 |
| Msa0119440 | Msa1460750 | 0.838086 | 3.543643e-57 | -8.615850e-47 |
| Msa0119440 | Msa1462360 | 0.804108 | 2.530685e-49 | -8.615850e-47 |
| Msa0119440 | Msa1462470 | 0.835499 | 1.619825e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0119440 | MtrunA17_Chr1g0177131 | 97.067 | 341 | 8 | 1 | 1 | 341 | 1 | 339 | 0.0 | 683 |
| Msa0119440 | MtrunA17_Chr1g0177121 | 68.259 | 293 | 83 | 4 | 1 | 291 | 1 | 285 | 9.87e-145 | 410 |
| Msa0119440 | MtrunA17_Chr4g0048121 | 58.644 | 295 | 105 | 2 | 1 | 293 | 1 | 280 | 2.60e-124 | 359 |
| Msa0119440 | MtrunA17_Chr7g0267551 | 56.314 | 293 | 109 | 2 | 1 | 293 | 1 | 274 | 9.63e-117 | 339 |
| Msa0119440 | MtrunA17_Chr2g0281201 | 60.976 | 246 | 96 | 0 | 61 | 306 | 1 | 246 | 1.87e-113 | 330 |
| Msa0119440 | MtrunA17_Chr5g0398891 | 48.583 | 247 | 126 | 1 | 46 | 291 | 50 | 296 | 9.39e-84 | 256 |
| Msa0119440 | MtrunA17_Chr6g0461261 | 44.127 | 315 | 157 | 2 | 1 | 312 | 1 | 299 | 5.92e-79 | 243 |
| Msa0119440 | MtrunA17_Chr2g0322801 | 43.770 | 313 | 168 | 3 | 1 | 313 | 1 | 305 | 2.65e-75 | 234 |
| Msa0119440 | MtrunA17_Chr5g0404401 | 41.129 | 248 | 136 | 2 | 46 | 292 | 40 | 278 | 3.85e-60 | 195 |
| Msa0119440 | MtrunA17_Chr8g0370611 | 43.373 | 83 | 47 | 0 | 46 | 128 | 40 | 122 | 6.48e-15 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0119440 | AT3G11820.2 | 69.836 | 305 | 83 | 2 | 39 | 335 | 5 | 308 | 9.54e-144 | 409 |
| Msa0119440 | AT3G11820.1 | 67.246 | 345 | 97 | 4 | 1 | 335 | 1 | 339 | 1.05e-143 | 410 |
| Msa0119440 | AT1G61290.1 | 57.516 | 306 | 116 | 3 | 1 | 306 | 1 | 292 | 2.86e-127 | 367 |
| Msa0119440 | AT1G61290.2 | 57.516 | 306 | 116 | 3 | 1 | 306 | 1 | 292 | 2.86e-127 | 367 |
| Msa0119440 | AT3G52400.1 | 62.222 | 315 | 115 | 2 | 1 | 315 | 1 | 311 | 1.16e-124 | 362 |
| Msa0119440 | AT1G11250.1 | 59.386 | 293 | 100 | 2 | 1 | 293 | 1 | 274 | 4.77e-124 | 358 |
| Msa0119440 | AT4G03330.1 | 57.388 | 291 | 113 | 2 | 1 | 291 | 1 | 280 | 3.38e-117 | 341 |
| Msa0119440 | AT3G03800.2 | 44.904 | 314 | 157 | 2 | 1 | 312 | 1 | 300 | 9.30e-81 | 248 |
| Msa0119440 | AT3G03800.1 | 44.904 | 314 | 157 | 2 | 1 | 312 | 1 | 300 | 9.30e-81 | 248 |
| Msa0119440 | AT1G08560.1 | 42.177 | 294 | 159 | 4 | 1 | 291 | 1 | 286 | 3.02e-76 | 237 |
| Msa0119440 | AT5G08080.1 | 45.223 | 314 | 159 | 2 | 1 | 314 | 1 | 301 | 3.27e-71 | 224 |
| Msa0119440 | AT5G08080.4 | 45.223 | 314 | 159 | 2 | 1 | 314 | 1 | 301 | 3.27e-71 | 224 |
| Msa0119440 | AT5G08080.3 | 43.692 | 325 | 159 | 4 | 1 | 314 | 1 | 312 | 4.96e-69 | 219 |
| Msa0119440 | AT2G18260.2 | 39.773 | 264 | 152 | 2 | 46 | 309 | 46 | 302 | 2.26e-60 | 196 |
| Msa0119440 | AT2G18260.1 | 39.773 | 264 | 152 | 2 | 46 | 309 | 46 | 302 | 2.26e-60 | 196 |
| Msa0119440 | AT5G08080.5 | 40.376 | 213 | 114 | 2 | 1 | 213 | 1 | 200 | 4.72e-34 | 125 |
| Msa0119440 | AT5G08080.2 | 40.376 | 213 | 114 | 2 | 1 | 213 | 1 | 200 | 4.72e-34 | 125 |
Find 132 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTGCTCCGGCTCCGGTTC+TGG | 0.233125 | 1_3:+43402665 | None:intergenic |
| CCCGTCACCTCCTCCTCCTT+CGG | 0.261959 | 1_3:-43400597 | Msa0119440:CDS |
| TTCGGGTGGTACTTAATCTT+AGG | 0.262579 | 1_3:-43400579 | Msa0119440:exon |
| CCTCTCTTGAATTTCATTGA+TGG | 0.265261 | 1_3:+43400943 | None:intergenic |
| AGTTTCTGTGGCGTTGAAAA+AGG | 0.271121 | 1_3:-43402478 | Msa0119440:CDS |
| TAATGCAGCGAACCGGAATT+TGG | 0.272373 | 1_3:-43402415 | Msa0119440:CDS |
| ACAAGGCAGGGGAAGAATTC+TGG | 0.274465 | 1_3:-43400969 | Msa0119440:CDS |
| CTATAAACTTCTATGAATAT+TGG | 0.283222 | 1_3:-43400540 | Msa0119440:three_prime_UTR |
| TCCATTTCCTTGTGTTTCTC+TGG | 0.322362 | 1_3:+43400744 | None:intergenic |
| TTTAGCATCGTGAACCGTTT+TGG | 0.332874 | 1_3:+43402536 | None:intergenic |
| CCGTCACCTCCTCCTCCTTC+GGG | 0.338871 | 1_3:-43400596 | Msa0119440:CDS |
| GTCCACATCCTTCCAAATTC+CGG | 0.344060 | 1_3:+43402403 | None:intergenic |
| TAGAAGTATAATACAATAAC+AGG | 0.363828 | 1_3:+43400721 | None:intergenic |
| TTGAATTGCTTTCTGAAGAA+AGG | 0.380131 | 1_3:+43400994 | None:intergenic |
| CCGAAGGAGGAGGAGGTGAC+GGG | 0.392162 | 1_3:+43400597 | None:intergenic |
| GCCAGAACCGGAGCCGGAGC+AGG | 0.395459 | 1_3:-43402666 | Msa0119440:CDS |
| GAAGAAGTTGAAGGATTCAA+TGG | 0.401659 | 1_3:-43402331 | Msa0119440:CDS |
| GTGCGTGCGTGTGGCGTGTT+TGG | 0.402265 | 1_3:+43402945 | None:intergenic |
| ACAGTTTCAAGGTGAGCAAT+TGG | 0.421621 | 1_3:-43400846 | Msa0119440:CDS |
| GCCGGTGCCGGAGCCAGAAC+CGG | 0.424735 | 1_3:-43402678 | Msa0119440:CDS |
| ATGGAGTAGGATAAGGAGAA+TGG | 0.428705 | 1_3:+43402897 | None:intergenic |
| TCGGGTGGTACTTAATCTTA+GGG | 0.433403 | 1_3:-43400578 | Msa0119440:exon |
| TAAAAGAAGAAACTTCGTAT+TGG | 0.434497 | 1_3:+43402974 | None:intergenic |
| TATTATTTCAATCCATGAAA+AGG | 0.435772 | 1_3:-43400458 | Msa0119440:three_prime_UTR |
| ACGAGGAGTTCGGTGGTGAA+TGG | 0.443962 | 1_3:-43402360 | Msa0119440:CDS |
| TCTACCTCCTGCTCCGGCTC+CGG | 0.444894 | 1_3:+43402659 | None:intergenic |
| CCTTGCAGTTTGTAACTGTT+CGG | 0.445129 | 1_3:+43400772 | None:intergenic |
| CCCGAAGGAGGAGGAGGTGA+CGG | 0.445219 | 1_3:+43400596 | None:intergenic |
| CGAGGAGTTCGGTGGTGAAT+GGG | 0.450137 | 1_3:-43402359 | Msa0119440:CDS |
| TGGAGTAGGATAAGGAGAAT+GGG | 0.450368 | 1_3:+43402898 | None:intergenic |
| TCCGGTTCTGGCTCCGGCAC+CGG | 0.450555 | 1_3:+43402677 | None:intergenic |
| TAAAATGATGGAGTAGGATA+AGG | 0.450953 | 1_3:+43402890 | None:intergenic |
| AATGATAGTGGAGGCGGTGG+GGG | 0.457534 | 1_3:-43400647 | Msa0119440:CDS |
| CTAGAAAGGAATGGTTGGTT+GGG | 0.457734 | 1_3:-43400408 | Msa0119440:three_prime_UTR |
| ACCAGAGAAACACAAGGAAA+TGG | 0.460665 | 1_3:-43400745 | Msa0119440:CDS |
| TCAATGGATATTTAAAATGA+TGG | 0.468753 | 1_3:+43402878 | None:intergenic |
| ATCGGACCGGACGAGGAGTT+CGG | 0.469936 | 1_3:-43402370 | Msa0119440:CDS |
| AAAAGACGATTTAAAAGAGC+TGG | 0.472574 | 1_3:-43402598 | Msa0119440:CDS |
| CCATGGCAACATAATGATAG+TGG | 0.472933 | 1_3:-43400659 | Msa0119440:CDS |
| CATAATGATAGTGGAGGCGG+TGG | 0.476400 | 1_3:-43400650 | Msa0119440:CDS |
| CTTGATCTATTGATCTCTAC+TGG | 0.477120 | 1_3:-43402207 | Msa0119440:intron |
| ATTTCAATCCATGAAAAGGT+TGG | 0.480852 | 1_3:-43400454 | Msa0119440:three_prime_UTR |
| CCACTATCATTATGTTGCCA+TGG | 0.481591 | 1_3:+43400659 | None:intergenic |
| AAGCAATTCAAGAACAAGGC+AGG | 0.485542 | 1_3:-43400982 | Msa0119440:CDS |
| ACAGTTATGGTACAGTTTCA+AGG | 0.486936 | 1_3:-43400857 | Msa0119440:CDS |
| TCCGGCTCCGGTTCTGGCTC+CGG | 0.487014 | 1_3:+43402671 | None:intergenic |
| GCCGGAGCCAGAACCGGAGC+CGG | 0.488959 | 1_3:-43402672 | Msa0119440:CDS |
| CGAAGGAGGAGGAGGTGACG+GGG | 0.489563 | 1_3:+43400598 | None:intergenic |
| TCGATGACGTGGTGCCGGTC+CGG | 0.492087 | 1_3:+43402714 | None:intergenic |
| TCTAGAAAGGAATGGTTGGT+TGG | 0.494379 | 1_3:-43400409 | Msa0119440:three_prime_UTR |
| CGTTAGTCTTAGAAAGTCGT+TGG | 0.499008 | 1_3:+43402565 | None:intergenic |
| ATGACAGACGGTGCCGGTGC+CGG | 0.503950 | 1_3:-43402690 | Msa0119440:CDS |
| GTTTATTCTACCTCCTGCTC+CGG | 0.505856 | 1_3:+43402653 | None:intergenic |
| TCATCTCGATGACGTGGTGC+CGG | 0.507346 | 1_3:+43402709 | None:intergenic |
| AGATCAAGAGTCTTATCATC+AGG | 0.511696 | 1_3:+43402222 | None:intergenic |
| GTCCGGTCCGATGACGAACC+CGG | 0.519002 | 1_3:+43402381 | None:intergenic |
| GAATTTGGAAGGATGTGGAC+CGG | 0.521500 | 1_3:-43402400 | Msa0119440:CDS |
| CTTGATCGTGGTTCTTGCCA+CGG | 0.525394 | 1_3:-43400687 | Msa0119440:CDS |
| AGAACCGGAGCCGGAGCAGG+AGG | 0.526171 | 1_3:-43402663 | Msa0119440:CDS |
| GTTCCTCGACATGACAGTTA+TGG | 0.527074 | 1_3:-43400870 | Msa0119440:CDS |
| GTGGGGTCTGTAATCTAGAA+AGG | 0.527411 | 1_3:-43400422 | Msa0119440:three_prime_UTR |
| CTGTCATGTCGAGGAACACT+TGG | 0.530452 | 1_3:+43400876 | None:intergenic |
| AAAGATCTAATGCAGCGAAC+CGG | 0.530927 | 1_3:-43402422 | Msa0119440:CDS |
| TAATACCGCGTGCGTGCGTG+TGG | 0.537128 | 1_3:+43402936 | None:intergenic |
| ATGTGGACCGGGTTCGTCAT+CGG | 0.538111 | 1_3:-43402388 | Msa0119440:CDS |
| TGGGTTGAAGAAGAAGTTGA+AGG | 0.539071 | 1_3:-43402340 | Msa0119440:CDS |
| GGAGTAGGATAAGGAGAATG+GGG | 0.539124 | 1_3:+43402899 | None:intergenic |
| GACTAACGAACAAACCAAAA+CGG | 0.539854 | 1_3:-43402550 | Msa0119440:CDS |
| GAAGCTGAAGCTGGAGGCGT+TGG | 0.540329 | 1_3:-43402445 | Msa0119440:CDS |
| TAGTCTTAGAAAGTCGTTGG+TGG | 0.541554 | 1_3:+43402568 | None:intergenic |
| TCACCACCGAACTCCTCGTC+CGG | 0.541854 | 1_3:+43402364 | None:intergenic |
| GAAGGAGCTTCGTTCACGTA+TGG | 0.543242 | 1_3:-43402508 | Msa0119440:CDS |
| GAAGATGGTGAAGCTGAAGC+TGG | 0.544305 | 1_3:-43402454 | Msa0119440:CDS |
| GTTCGTCATCGGACCGGACG+AGG | 0.544789 | 1_3:-43402377 | Msa0119440:CDS |
| GATATTTAAAATGATGGAGT+AGG | 0.546377 | 1_3:+43402884 | None:intergenic |
| GCATGACGCTGTCAAAGACT+TGG | 0.549313 | 1_3:-43400921 | Msa0119440:CDS |
| GATTGAAATAATAAAACTGT+AGG | 0.549854 | 1_3:+43400468 | None:intergenic |
| TAATGATAGTGGAGGCGGTG+GGG | 0.551632 | 1_3:-43400648 | Msa0119440:CDS |
| GACCGGGTTCGTCATCGGAC+CGG | 0.552658 | 1_3:-43402383 | Msa0119440:CDS |
| AACCGGAATTTGGAAGGATG+TGG | 0.553790 | 1_3:-43402405 | Msa0119440:CDS |
| ACGAGCTCGCCCTCGCCACA+TGG | 0.555170 | 1_3:+43400810 | None:intergenic |
| GTAATCTAGAAAGGAATGGT+TGG | 0.557247 | 1_3:-43400413 | Msa0119440:three_prime_UTR |
| GTGAAGAAGTTTCACCGGAC+CGG | 0.559293 | 1_3:-43402728 | Msa0119440:CDS |
| TAAGTACCACCCGAAGGAGG+AGG | 0.565613 | 1_3:+43400587 | None:intergenic |
| AGACTTGGAGAAGAGTCTAC+TGG | 0.566833 | 1_3:-43400906 | Msa0119440:CDS |
| GTACCACCCGAAGGAGGAGG+AGG | 0.568216 | 1_3:+43400590 | None:intergenic |
| ATTGATCATTGTCTTGATCG+TGG | 0.570829 | 1_3:-43400699 | Msa0119440:CDS |
| AATTTGGAAGGATGTGGACC+GGG | 0.572538 | 1_3:-43402399 | Msa0119440:CDS |
| AGCAATTCAAGAACAAGGCA+GGG | 0.573394 | 1_3:-43400981 | Msa0119440:CDS |
| CAGAAAGCAATTCAAGAACA+AGG | 0.578887 | 1_3:-43400986 | Msa0119440:CDS |
| CAACATAATGATAGTGGAGG+CGG | 0.579137 | 1_3:-43400653 | Msa0119440:CDS |
| AAAACGGTTCACGATGCTAA+AGG | 0.580222 | 1_3:-43402534 | Msa0119440:CDS |
| CCGTAGTGAAGAAGTTTCAC+CGG | 0.580387 | 1_3:-43402733 | Msa0119440:CDS |
| ATCGAGATGACAGACGGTGC+CGG | 0.580893 | 1_3:-43402696 | Msa0119440:CDS |
| AAATTCTTCGACGACGTCGA+AGG | 0.582409 | 1_3:-43402624 | Msa0119440:CDS |
| ATAATGATAGTGGAGGCGGT+GGG | 0.590164 | 1_3:-43400649 | Msa0119440:CDS |
| GCAGCGAACCGGAATTTGGA+AGG | 0.594827 | 1_3:-43402411 | Msa0119440:CDS |
| TTGGAAGGGTGTGACTAACA+TGG | 0.595421 | 1_3:-43400496 | Msa0119440:three_prime_UTR |
| GAGAATGGGGTAGAATGCAG+AGG | 0.595777 | 1_3:+43402912 | None:intergenic |
| AAAAGGTTGGATGATGAATG+TGG | 0.601396 | 1_3:-43400441 | Msa0119440:three_prime_UTR |
| GTCTGTAATCTAGAAAGGAA+TGG | 0.602221 | 1_3:-43400417 | Msa0119440:three_prime_UTR |
| GAGACAAGTTCAAATTGTGA+AGG | 0.608864 | 1_3:+43402998 | None:intergenic |
| AAAGGTTGGATGATGAATGT+GGG | 0.611605 | 1_3:-43400440 | Msa0119440:three_prime_UTR |
| GCAATTCAAGAACAAGGCAG+GGG | 0.612361 | 1_3:-43400980 | Msa0119440:CDS |
| TATCGAGAGCCATGTGGCGA+GGG | 0.613532 | 1_3:-43400819 | Msa0119440:CDS |
| TCACGATGCTAAAGGAGTGA+AGG | 0.617381 | 1_3:-43402526 | Msa0119440:CDS |
| GAAGGAGGAGGAGGTGACGG+GGG | 0.620690 | 1_3:+43400599 | None:intergenic |
| GCGAGCTCGTTTGTGCACAC+TGG | 0.621398 | 1_3:-43400797 | Msa0119440:CDS |
| CGTCGTCGAAGAATTTGTCG+AGG | 0.622912 | 1_3:+43402631 | None:intergenic |
| ATATCGAGAGCCATGTGGCG+AGG | 0.623389 | 1_3:-43400820 | Msa0119440:CDS |
| TTCTTGCCACGGTGAAACCA+TGG | 0.631742 | 1_3:-43400676 | Msa0119440:CDS |
| GATGGTGAAGCTGAAGCTGG+AGG | 0.632553 | 1_3:-43402451 | Msa0119440:CDS |
| AAAATGAACAACTTATTCAG+CGG | 0.633088 | 1_3:-43402771 | Msa0119440:CDS |
| TCACCTCCTCCTCCTTCGGG+TGG | 0.636070 | 1_3:-43400593 | Msa0119440:CDS |
| TATGGACGAAGAAGTTTCTG+TGG | 0.652355 | 1_3:-43402490 | Msa0119440:CDS |
| CGTCTGTCATCTCGATGACG+TGG | 0.652928 | 1_3:+43402703 | None:intergenic |
| CCGAACAGTTACAAACTGCA+AGG | 0.655391 | 1_3:-43400772 | Msa0119440:CDS |
| GATTAAGTACCACCCGAAGG+AGG | 0.656702 | 1_3:+43400584 | None:intergenic |
| CCGGTGAAACTTCTTCACTA+CGG | 0.658758 | 1_3:+43402733 | None:intergenic |
| CACGTCATCGAGATGACAGA+CGG | 0.659715 | 1_3:-43402702 | Msa0119440:CDS |
| GTACCATAACTGTCATGTCG+AGG | 0.662556 | 1_3:+43400867 | None:intergenic |
| CCATCAATGAAATTCAAGAG+AGG | 0.665676 | 1_3:-43400943 | Msa0119440:CDS |
| AAGGTTGGATGATGAATGTG+GGG | 0.674223 | 1_3:-43400439 | Msa0119440:three_prime_UTR |
| TGGCAACATAATGATAGTGG+AGG | 0.674274 | 1_3:-43400656 | Msa0119440:CDS |
| ACACGCCACACGCACGCACG+CGG | 0.684322 | 1_3:-43402941 | Msa0119440:five_prime_UTR |
| TAAGATTAAGTACCACCCGA+AGG | 0.686561 | 1_3:+43400581 | None:intergenic |
| GGAAGCACCAGAGAAACACA+AGG | 0.690964 | 1_3:-43400751 | Msa0119440:CDS |
| GGACCGGACGAGGAGTTCGG+TGG | 0.695156 | 1_3:-43402367 | Msa0119440:CDS |
| TTTGCGGGAAGTTATTACGA+CGG | 0.695451 | 1_3:-43402295 | Msa0119440:CDS |
| AGTATAGAGAGACTGTTCAA+CGG | 0.733726 | 1_3:-43402272 | Msa0119440:CDS |
| GGATGATATCGAGAGCCATG+TGG | 0.741101 | 1_3:-43400825 | Msa0119440:CDS |
| ATGTTGCCATGGTTTCACCG+TGG | 0.746888 | 1_3:+43400670 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATGATTAGTTTATAAAAT+TGG | - | chr1_3:43401269-43401288 | Msa0119440:intron | 10.0% |
| !! | TTGGATAAAAATTTATTAGT+AGG | - | chr1_3:43401288-43401307 | Msa0119440:intron | 15.0% |
| !! | AAATTTATTAGTAGGTTAAT+TGG | - | chr1_3:43401296-43401315 | Msa0119440:intron | 15.0% |
| !!! | TCAATGGATATTTAAAATGA+TGG | + | chr1_3:43400466-43400485 | None:intergenic | 20.0% |
| !!! | GTATGAATGTTTTAAAATCT+AGG | - | chr1_3:43401230-43401249 | Msa0119440:intron | 20.0% |
| !!! | TTAATTGGTGTTTTAGATTA+TGG | - | chr1_3:43401311-43401330 | Msa0119440:intron | 20.0% |
| !!! | TTTAAAGATAACTTGTTTGT+TGG | - | chr1_3:43402215-43402234 | Msa0119440:CDS | 20.0% |
| !!! | TTAAAGATAACTTGTTTGTT+GGG | - | chr1_3:43402216-43402235 | Msa0119440:CDS | 20.0% |
| !!! | TTTGTCTTTTAATTAAGTTC+AGG | - | chr1_3:43402263-43402282 | Msa0119440:CDS | 20.0% |
| !!! | TAGAAGTATAATACAATAAC+AGG | + | chr1_3:43402623-43402642 | None:intergenic | 20.0% |
| !! | CTATAAACTTCTATGAATAT+TGG | - | chr1_3:43402801-43402820 | Msa0119440:five_prime_UTR | 20.0% |
| !!! | ATTGGTTAAATCATGTTTTT+AGG | - | chr1_3:43402819-43402838 | Msa0119440:five_prime_UTR | 20.0% |
| !! | GATTGAAATAATAAAACTGT+AGG | + | chr1_3:43402876-43402895 | None:intergenic | 20.0% |
| !! | TATTATTTCAATCCATGAAA+AGG | - | chr1_3:43402883-43402902 | Msa0119440:five_prime_UTR | 20.0% |
| ! | TAAAAGAAGAAACTTCGTAT+TGG | + | chr1_3:43400370-43400389 | None:intergenic | 25.0% |
| !! | GATATTTAAAATGATGGAGT+AGG | + | chr1_3:43400460-43400479 | None:intergenic | 25.0% |
| ! | TGATCGAAAAATGTGTAATA+AGG | + | chr1_3:43400524-43400543 | None:intergenic | 25.0% |
| ! | AAAATGAACAACTTATTCAG+CGG | - | chr1_3:43400570-43400589 | Msa0119440:exon | 25.0% |
| !! | TAGATTATGGATTATGTACT+AGG | - | chr1_3:43401324-43401343 | Msa0119440:intron | 25.0% |
| ! | GAATGAAAAATAAACTGAAC+TGG | - | chr1_3:43401382-43401401 | Msa0119440:intron | 25.0% |
| ! | TTGATATAAAACTACAAGTG+AGG | - | chr1_3:43401420-43401439 | Msa0119440:intron | 25.0% |
| !!! | ACTGATTTTGAAATTTGAGT+CGG | + | chr1_3:43401848-43401867 | None:intergenic | 25.0% |
| !!! | AAATCATGTTTTTAGGATCT+TGG | - | chr1_3:43402826-43402845 | Msa0119440:five_prime_UTR | 25.0% |
| ! | TAAAATGATGGAGTAGGATA+AGG | + | chr1_3:43400454-43400473 | None:intergenic | 30.0% |
| !!! | AGAAAGAGTTTTGAAGTCAA+TGG | + | chr1_3:43400482-43400501 | None:intergenic | 30.0% |
| AAAAGACGATTTAAAAGAGC+TGG | - | chr1_3:43400743-43400762 | Msa0119440:CDS | 30.0% | |
| TGAAAAATAAACTGAACTGG+TGG | - | chr1_3:43401385-43401404 | Msa0119440:intron | 30.0% | |
| TAACAAAACTGAATGTCAAC+CGG | + | chr1_3:43401562-43401581 | None:intergenic | 30.0% | |
| TGTCAACATGTCAGTATTTA+TGG | - | chr1_3:43401602-43401621 | Msa0119440:intron | 30.0% | |
| GTCAACATGTCAGTATTTAT+GGG | - | chr1_3:43401603-43401622 | Msa0119440:intron | 30.0% | |
| ! | TTGAATTGCTTTCTGAAGAA+AGG | + | chr1_3:43402350-43402369 | None:intergenic | 30.0% |
| !!! | ATGTTTTTAGGATCTTGGAA+GGG | - | chr1_3:43402831-43402850 | Msa0119440:five_prime_UTR | 30.0% |
| ATTTCAATCCATGAAAAGGT+TGG | - | chr1_3:43402887-43402906 | Msa0119440:five_prime_UTR | 30.0% | |
| ! | TTTTTCTGTAAGTATCATGC+TGG | - | chr1_3:43403008-43403027 | Msa0119440:five_prime_UTR | 30.0% |
| GAGACAAGTTCAAATTGTGA+AGG | + | chr1_3:43400346-43400365 | None:intergenic | 35.0% | |
| GACTAACGAACAAACCAAAA+CGG | - | chr1_3:43400791-43400810 | Msa0119440:CDS | 35.0% | |
| GAAGAAGTTGAAGGATTCAA+TGG | - | chr1_3:43401010-43401029 | Msa0119440:intron | 35.0% | |
| !! | TGGAGAGTTTTAATCGTTTG+CGG | - | chr1_3:43401030-43401049 | Msa0119440:intron | 35.0% |
| AGTATAGAGAGACTGTTCAA+CGG | - | chr1_3:43401069-43401088 | Msa0119440:intron | 35.0% | |
| ! | AGATCAAGAGTCTTATCATC+AGG | + | chr1_3:43401122-43401141 | None:intergenic | 35.0% |
| CTTGATCTATTGATCTCTAC+TGG | - | chr1_3:43401134-43401153 | Msa0119440:intron | 35.0% | |
| ! | ACATGATTTTCCTTAGTGTG+AGG | - | chr1_3:43401452-43401471 | Msa0119440:intron | 35.0% |
| TTACTAGTAACCTCACACTA+AGG | + | chr1_3:43401465-43401484 | None:intergenic | 35.0% | |
| TCAACACTTCTAATCTTCGA+AGG | - | chr1_3:43401501-43401520 | Msa0119440:intron | 35.0% | |
| AAATACTGACATGTTGACAC+TGG | + | chr1_3:43401601-43401620 | None:intergenic | 35.0% | |
| TTCCATGTAGTTAGATTCCT+TGG | - | chr1_3:43401783-43401802 | Msa0119440:intron | 35.0% | |
| ATCCAAGGAATCTAACTACA+TGG | + | chr1_3:43401788-43401807 | None:intergenic | 35.0% | |
| GATAGTTCAGTTCAGACTTT+GGG | + | chr1_3:43401901-43401920 | None:intergenic | 35.0% | |
| AGATAGTTCAGTTCAGACTT+TGG | + | chr1_3:43401902-43401921 | None:intergenic | 35.0% | |
| ! | AAACAAATTCTCTAGAAGCC+AGG | + | chr1_3:43401967-43401986 | None:intergenic | 35.0% |
| !! | AGATAACTTGTTTGTTGGGT+TGG | - | chr1_3:43402220-43402239 | Msa0119440:CDS | 35.0% |
| CAGAAAGCAATTCAAGAACA+AGG | - | chr1_3:43402355-43402374 | Msa0119440:CDS | 35.0% | |
| CCTCTCTTGAATTTCATTGA+TGG | + | chr1_3:43402401-43402420 | None:intergenic | 35.0% | |
| CCATCAATGAAATTCAAGAG+AGG | - | chr1_3:43402398-43402417 | Msa0119440:CDS | 35.0% | |
| ACAGTTATGGTACAGTTTCA+AGG | - | chr1_3:43402484-43402503 | Msa0119440:CDS | 35.0% | |
| ATTGATCATTGTCTTGATCG+TGG | - | chr1_3:43402642-43402661 | Msa0119440:CDS | 35.0% | |
| !!! | CATGTTTTTAGGATCTTGGA+AGG | - | chr1_3:43402830-43402849 | Msa0119440:five_prime_UTR | 35.0% |
| ! | TTCATCATCCAACCTTTTCA+TGG | + | chr1_3:43402898-43402917 | None:intergenic | 35.0% |
| AAAAGGTTGGATGATGAATG+TGG | - | chr1_3:43402900-43402919 | Msa0119440:five_prime_UTR | 35.0% | |
| AAAGGTTGGATGATGAATGT+GGG | - | chr1_3:43402901-43402920 | Msa0119440:five_prime_UTR | 35.0% | |
| GTCTGTAATCTAGAAAGGAA+TGG | - | chr1_3:43402924-43402943 | Msa0119440:five_prime_UTR | 35.0% | |
| GTAATCTAGAAAGGAATGGT+TGG | - | chr1_3:43402928-43402947 | Msa0119440:five_prime_UTR | 35.0% | |
| !!! | TTTGTTTTGAGGAGGACTTT+TGG | - | chr1_3:43402959-43402978 | Msa0119440:five_prime_UTR | 35.0% |
| TGGAGTAGGATAAGGAGAAT+GGG | + | chr1_3:43400446-43400465 | None:intergenic | 40.0% | |
| ATGGAGTAGGATAAGGAGAA+TGG | + | chr1_3:43400447-43400466 | None:intergenic | 40.0% | |
| ! | TAGTCTTAGAAAGTCGTTGG+TGG | + | chr1_3:43400776-43400795 | None:intergenic | 40.0% |
| !! | CGTTAGTCTTAGAAAGTCGT+TGG | + | chr1_3:43400779-43400798 | None:intergenic | 40.0% |
| ! | TTTAGCATCGTGAACCGTTT+TGG | + | chr1_3:43400808-43400827 | None:intergenic | 40.0% |
| AAAACGGTTCACGATGCTAA+AGG | - | chr1_3:43400807-43400826 | Msa0119440:CDS | 40.0% | |
| TATGGACGAAGAAGTTTCTG+TGG | - | chr1_3:43400851-43400870 | Msa0119440:CDS | 40.0% | |
| ! | AGTTTCTGTGGCGTTGAAAA+AGG | - | chr1_3:43400863-43400882 | Msa0119440:CDS | 40.0% |
| AAAGATCTAATGCAGCGAAC+CGG | - | chr1_3:43400919-43400938 | Msa0119440:CDS | 40.0% | |
| ! | TGGGTTGAAGAAGAAGTTGA+AGG | - | chr1_3:43401001-43401020 | Msa0119440:CDS | 40.0% |
| !! | GGAGAGTTTTAATCGTTTGC+GGG | - | chr1_3:43401031-43401050 | Msa0119440:intron | 40.0% |
| TTTGCGGGAAGTTATTACGA+CGG | - | chr1_3:43401046-43401065 | Msa0119440:intron | 40.0% | |
| !! | CGGCGTTATTTTACTGTTAC+TGG | - | chr1_3:43401089-43401108 | Msa0119440:intron | 40.0% |
| AAACTGAACTGGTGGAGAAT+TGG | - | chr1_3:43401393-43401412 | Msa0119440:intron | 40.0% | |
| ATGTAACTGACCTCACTTAG+TGG | - | chr1_3:43401638-43401657 | Msa0119440:intron | 40.0% | |
| TGTAACTGACCTCACTTAGT+GGG | - | chr1_3:43401639-43401658 | Msa0119440:intron | 40.0% | |
| TCACTTAGTGGGATAAGACT+GGG | - | chr1_3:43401650-43401669 | Msa0119440:intron | 40.0% | |
| ACTACATGGAAACCAAATCC+AGG | + | chr1_3:43401774-43401793 | None:intergenic | 40.0% | |
| CTTTAGACTGAGTGAATCCA+AGG | + | chr1_3:43401803-43401822 | None:intergenic | 40.0% | |
| ATGAGGATTTCCTGCATTCA+CGG | + | chr1_3:43402082-43402101 | None:intergenic | 40.0% | |
| ATGCAGGAAATCCTCATTGA+TGG | - | chr1_3:43402085-43402104 | Msa0119440:intron | 40.0% | |
| AAGATTCTCCACCATCAATG+AGG | + | chr1_3:43402099-43402118 | None:intergenic | 40.0% | |
| ATCTACATGTATCATGCCAC+CGG | + | chr1_3:43402147-43402166 | None:intergenic | 40.0% | |
| TGTGAGTTTCACTTTGATGC+AGG | - | chr1_3:43402313-43402332 | Msa0119440:CDS | 40.0% | |
| AAGCAATTCAAGAACAAGGC+AGG | - | chr1_3:43402359-43402378 | Msa0119440:CDS | 40.0% | |
| AGCAATTCAAGAACAAGGCA+GGG | - | chr1_3:43402360-43402379 | Msa0119440:CDS | 40.0% | |
| ACAGTTTCAAGGTGAGCAAT+TGG | - | chr1_3:43402495-43402514 | Msa0119440:CDS | 40.0% | |
| CCTTGCAGTTTGTAACTGTT+CGG | + | chr1_3:43402572-43402591 | None:intergenic | 40.0% | |
| ACCAGAGAAACACAAGGAAA+TGG | - | chr1_3:43402596-43402615 | Msa0119440:CDS | 40.0% | |
| TCCATTTCCTTGTGTTTCTC+TGG | + | chr1_3:43402600-43402619 | None:intergenic | 40.0% | |
| CCACTATCATTATGTTGCCA+TGG | + | chr1_3:43402685-43402704 | None:intergenic | 40.0% | |
| CCATGGCAACATAATGATAG+TGG | - | chr1_3:43402682-43402701 | Msa0119440:CDS | 40.0% | |
| !! | TGGCAACATAATGATAGTGG+AGG | - | chr1_3:43402685-43402704 | Msa0119440:CDS | 40.0% |
| !! | CAACATAATGATAGTGGAGG+CGG | - | chr1_3:43402688-43402707 | Msa0119440:CDS | 40.0% |
| TAAGATTAAGTACCACCCGA+AGG | + | chr1_3:43402763-43402782 | None:intergenic | 40.0% | |
| TTCGGGTGGTACTTAATCTT+AGG | - | chr1_3:43402762-43402781 | Msa0119440:CDS | 40.0% | |
| TCGGGTGGTACTTAATCTTA+GGG | - | chr1_3:43402763-43402782 | Msa0119440:CDS | 40.0% | |
| AAGGTTGGATGATGAATGTG+GGG | - | chr1_3:43402902-43402921 | Msa0119440:five_prime_UTR | 40.0% | |
| TCTAGAAAGGAATGGTTGGT+TGG | - | chr1_3:43402932-43402951 | Msa0119440:five_prime_UTR | 40.0% | |
| ! | CTAGAAAGGAATGGTTGGTT+GGG | - | chr1_3:43402933-43402952 | Msa0119440:five_prime_UTR | 40.0% |
| !!! | TGGTTGGGTCTTTTGTTTTG+AGG | - | chr1_3:43402948-43402967 | Msa0119440:five_prime_UTR | 40.0% |
| !!! | TTGGGTCTTTTGTTTTGAGG+AGG | - | chr1_3:43402951-43402970 | Msa0119440:five_prime_UTR | 40.0% |
| GGAGTAGGATAAGGAGAATG+GGG | + | chr1_3:43400445-43400464 | None:intergenic | 45.0% | |
| CCGGTGAAACTTCTTCACTA+CGG | + | chr1_3:43400611-43400630 | None:intergenic | 45.0% | |
| CCGTAGTGAAGAAGTTTCAC+CGG | - | chr1_3:43400608-43400627 | Msa0119440:CDS | 45.0% | |
| GTTTATTCTACCTCCTGCTC+CGG | + | chr1_3:43400691-43400710 | None:intergenic | 45.0% | |
| AAATTCTTCGACGACGTCGA+AGG | - | chr1_3:43400717-43400736 | Msa0119440:CDS | 45.0% | |
| TCACGATGCTAAAGGAGTGA+AGG | - | chr1_3:43400815-43400834 | Msa0119440:CDS | 45.0% | |
| TAATGCAGCGAACCGGAATT+TGG | - | chr1_3:43400926-43400945 | Msa0119440:CDS | 45.0% | |
| AACCGGAATTTGGAAGGATG+TGG | - | chr1_3:43400936-43400955 | Msa0119440:CDS | 45.0% | |
| GTCCACATCCTTCCAAATTC+CGG | + | chr1_3:43400941-43400960 | None:intergenic | 45.0% | |
| GAATTTGGAAGGATGTGGAC+CGG | - | chr1_3:43400941-43400960 | Msa0119440:CDS | 45.0% | |
| AATTTGGAAGGATGTGGACC+GGG | - | chr1_3:43400942-43400961 | Msa0119440:CDS | 45.0% | |
| ! | TGTCTGATTCGTGTCAGTGT+CGG | - | chr1_3:43401533-43401552 | Msa0119440:intron | 45.0% |
| ! | CAGTCTTATCCCACTAAGTG+AGG | + | chr1_3:43401651-43401670 | None:intergenic | 45.0% |
| CTCACTTAGTGGGATAAGAC+TGG | - | chr1_3:43401649-43401668 | Msa0119440:intron | 45.0% | |
| TCTTGAAGAGATGTGCTACC+TGG | - | chr1_3:43401753-43401772 | Msa0119440:intron | 45.0% | |
| AGAGATGTGCTACCTGGATT+TGG | - | chr1_3:43401759-43401778 | Msa0119440:intron | 45.0% | |
| CAGGAAATCCTCATTGATGG+TGG | - | chr1_3:43402088-43402107 | Msa0119440:intron | 45.0% | |
| GCAATTCAAGAACAAGGCAG+GGG | - | chr1_3:43402361-43402380 | Msa0119440:CDS | 45.0% | |
| AGACTTGGAGAAGAGTCTAC+TGG | - | chr1_3:43402435-43402454 | Msa0119440:CDS | 45.0% | |
| GTTCCTCGACATGACAGTTA+TGG | - | chr1_3:43402471-43402490 | Msa0119440:CDS | 45.0% | |
| GTACCATAACTGTCATGTCG+AGG | + | chr1_3:43402477-43402496 | None:intergenic | 45.0% | |
| CCGAACAGTTACAAACTGCA+AGG | - | chr1_3:43402569-43402588 | Msa0119440:CDS | 45.0% | |
| !! | ATAATGATAGTGGAGGCGGT+GGG | - | chr1_3:43402692-43402711 | Msa0119440:CDS | 45.0% |
| ! | TTGGAAGGGTGTGACTAACA+TGG | - | chr1_3:43402845-43402864 | Msa0119440:five_prime_UTR | 45.0% |
| GTGGGGTCTGTAATCTAGAA+AGG | - | chr1_3:43402919-43402938 | Msa0119440:five_prime_UTR | 45.0% | |
| GAGAATGGGGTAGAATGCAG+AGG | + | chr1_3:43400432-43400451 | None:intergenic | 50.0% | |
| GTGAAGAAGTTTCACCGGAC+CGG | - | chr1_3:43400613-43400632 | Msa0119440:CDS | 50.0% | |
| CACGTCATCGAGATGACAGA+CGG | - | chr1_3:43400639-43400658 | Msa0119440:CDS | 50.0% | |
| CGTCGTCGAAGAATTTGTCG+AGG | + | chr1_3:43400713-43400732 | None:intergenic | 50.0% | |
| GAAGGAGCTTCGTTCACGTA+TGG | - | chr1_3:43400833-43400852 | Msa0119440:CDS | 50.0% | |
| ! | GGCGTTGAAAAAGGCGAAGA+TGG | - | chr1_3:43400872-43400891 | Msa0119440:CDS | 50.0% |
| GAAGATGGTGAAGCTGAAGC+TGG | - | chr1_3:43400887-43400906 | Msa0119440:CDS | 50.0% | |
| ! | TTCGTGTCAGTGTCGGATAC+CGG | - | chr1_3:43401540-43401559 | Msa0119440:intron | 50.0% |
| ! | TCTACCGATTGTGCGAATGC+AGG | - | chr1_3:43401937-43401956 | Msa0119440:intron | 50.0% |
| ! | CTACCGATTGTGCGAATGCA+GGG | - | chr1_3:43401938-43401957 | Msa0119440:intron | 50.0% |
| ! | TACCGATTGTGCGAATGCAG+GGG | - | chr1_3:43401939-43401958 | Msa0119440:intron | 50.0% |
| ATCCCCTGCATTCGCACAAT+CGG | + | chr1_3:43401944-43401963 | None:intergenic | 50.0% | |
| GTAAGAGGCTAATGGAGGGT+AGG | + | chr1_3:43401994-43402013 | None:intergenic | 50.0% | |
| GGCTGTAAGAGGCTAATGGA+GGG | + | chr1_3:43401998-43402017 | None:intergenic | 50.0% | |
| AGGCTGTAAGAGGCTAATGG+AGG | + | chr1_3:43401999-43402018 | None:intergenic | 50.0% | |
| GAGAGGCTGTAAGAGGCTAA+TGG | + | chr1_3:43402002-43402021 | None:intergenic | 50.0% | |
| TAGCCTCTTACAGCCTCTCA+CGG | - | chr1_3:43402003-43402022 | Msa0119440:intron | 50.0% | |
| CACATGTATCATGCCGTGAG+AGG | + | chr1_3:43402019-43402038 | None:intergenic | 50.0% | |
| !! | ACTACTGACTCCGTGAATGC+AGG | - | chr1_3:43402069-43402088 | Msa0119440:intron | 50.0% |
| TCCTACCCTTGATAAGCCTC+CGG | - | chr1_3:43402125-43402144 | Msa0119440:intron | 50.0% | |
| TACATGTATCATGCCACCGG+AGG | + | chr1_3:43402144-43402163 | None:intergenic | 50.0% | |
| ACAAGGCAGGGGAAGAATTC+TGG | - | chr1_3:43402372-43402391 | Msa0119440:CDS | 50.0% | |
| GCATGACGCTGTCAAAGACT+TGG | - | chr1_3:43402420-43402439 | Msa0119440:CDS | 50.0% | |
| CTGTCATGTCGAGGAACACT+TGG | + | chr1_3:43402468-43402487 | None:intergenic | 50.0% | |
| GGATGATATCGAGAGCCATG+TGG | - | chr1_3:43402516-43402535 | Msa0119440:CDS | 50.0% | |
| !! | GGAAGCACCAGAGAAACACA+AGG | - | chr1_3:43402590-43402609 | Msa0119440:CDS | 50.0% |
| CTTGATCGTGGTTCTTGCCA+CGG | - | chr1_3:43402654-43402673 | Msa0119440:CDS | 50.0% | |
| TTCTTGCCACGGTGAAACCA+TGG | - | chr1_3:43402665-43402684 | Msa0119440:CDS | 50.0% | |
| ATGTTGCCATGGTTTCACCG+TGG | + | chr1_3:43402674-43402693 | None:intergenic | 50.0% | |
| !! | CATAATGATAGTGGAGGCGG+TGG | - | chr1_3:43402691-43402710 | Msa0119440:CDS | 50.0% |
| !! | TAATGATAGTGGAGGCGGTG+GGG | - | chr1_3:43402693-43402712 | Msa0119440:CDS | 50.0% |
| GATTAAGTACCACCCGAAGG+AGG | + | chr1_3:43402760-43402779 | None:intergenic | 50.0% | |
| TCATCTCGATGACGTGGTGC+CGG | + | chr1_3:43400635-43400654 | None:intergenic | 55.0% | |
| CGTCTGTCATCTCGATGACG+TGG | + | chr1_3:43400641-43400660 | None:intergenic | 55.0% | |
| ATCGAGATGACAGACGGTGC+CGG | - | chr1_3:43400645-43400664 | Msa0119440:CDS | 55.0% | |
| GATGGTGAAGCTGAAGCTGG+AGG | - | chr1_3:43400890-43400909 | Msa0119440:CDS | 55.0% | |
| GCAGCGAACCGGAATTTGGA+AGG | - | chr1_3:43400930-43400949 | Msa0119440:CDS | 55.0% | |
| ATGTGGACCGGGTTCGTCAT+CGG | - | chr1_3:43400953-43400972 | Msa0119440:CDS | 55.0% | |
| ! | ACGAGGAGTTCGGTGGTGAA+TGG | - | chr1_3:43400981-43401000 | Msa0119440:CDS | 55.0% |
| ! | CGAGGAGTTCGGTGGTGAAT+GGG | - | chr1_3:43400982-43401001 | Msa0119440:CDS | 55.0% |
| ATGCCGTGAGAGGCTGTAAG+AGG | + | chr1_3:43402009-43402028 | None:intergenic | 55.0% | |
| ACCGGAGGCTTATCAAGGGT+AGG | + | chr1_3:43402129-43402148 | None:intergenic | 55.0% | |
| TACCCTTGATAAGCCTCCGG+TGG | - | chr1_3:43402128-43402147 | Msa0119440:intron | 55.0% | |
| TGCCACCGGAGGCTTATCAA+GGG | + | chr1_3:43402133-43402152 | None:intergenic | 55.0% | |
| ATGCCACCGGAGGCTTATCA+AGG | + | chr1_3:43402134-43402153 | None:intergenic | 55.0% | |
| ATATCGAGAGCCATGTGGCG+AGG | - | chr1_3:43402521-43402540 | Msa0119440:CDS | 55.0% | |
| TATCGAGAGCCATGTGGCGA+GGG | - | chr1_3:43402522-43402541 | Msa0119440:CDS | 55.0% | |
| !! | AATGATAGTGGAGGCGGTGG+GGG | - | chr1_3:43402694-43402713 | Msa0119440:CDS | 55.0% |
| TAAGTACCACCCGAAGGAGG+AGG | + | chr1_3:43402757-43402776 | None:intergenic | 55.0% | |
| TAATACCGCGTGCGTGCGTG+TGG | + | chr1_3:43400408-43400427 | None:intergenic | 60.0% | |
| ! | GAAGCTGAAGCTGGAGGCGT+TGG | - | chr1_3:43400896-43400915 | Msa0119440:CDS | 60.0% |
| ATCGGACCGGACGAGGAGTT+CGG | - | chr1_3:43400971-43400990 | Msa0119440:CDS | 60.0% | |
| TCACCACCGAACTCCTCGTC+CGG | + | chr1_3:43400980-43400999 | None:intergenic | 60.0% | |
| TGTGCGAATGCAGGGGATCC+TGG | - | chr1_3:43401946-43401965 | Msa0119440:intron | 60.0% | |
| GCGAGCTCGTTTGTGCACAC+TGG | - | chr1_3:43402544-43402563 | Msa0119440:CDS | 60.0% | |
| GTGCGTGCGTGTGGCGTGTT+TGG | + | chr1_3:43400399-43400418 | None:intergenic | 65.0% | |
| !! | TCGATGACGTGGTGCCGGTC+CGG | + | chr1_3:43400630-43400649 | None:intergenic | 65.0% |
| !! | ATGACAGACGGTGCCGGTGC+CGG | - | chr1_3:43400651-43400670 | Msa0119440:CDS | 65.0% |
| TCTACCTCCTGCTCCGGCTC+CGG | + | chr1_3:43400685-43400704 | None:intergenic | 65.0% | |
| GACCGGGTTCGTCATCGGAC+CGG | - | chr1_3:43400958-43400977 | Msa0119440:CDS | 65.0% | |
| GTCCGGTCCGATGACGAACC+CGG | + | chr1_3:43400963-43400982 | None:intergenic | 65.0% | |
| GTTCGTCATCGGACCGGACG+AGG | - | chr1_3:43400964-43400983 | Msa0119440:CDS | 65.0% | |
| ! | GAAGGAGGAGGAGGTGACGG+GGG | + | chr1_3:43402745-43402764 | None:intergenic | 65.0% |
| CGAAGGAGGAGGAGGTGACG+GGG | + | chr1_3:43402746-43402765 | None:intergenic | 65.0% | |
| CCGAAGGAGGAGGAGGTGAC+GGG | + | chr1_3:43402747-43402766 | None:intergenic | 65.0% | |
| CCCGTCACCTCCTCCTCCTT+CGG | - | chr1_3:43402744-43402763 | Msa0119440:CDS | 65.0% | |
| CCCGAAGGAGGAGGAGGTGA+CGG | + | chr1_3:43402748-43402767 | None:intergenic | 65.0% | |
| CCGTCACCTCCTCCTCCTTC+GGG | - | chr1_3:43402745-43402764 | Msa0119440:CDS | 65.0% | |
| TCACCTCCTCCTCCTTCGGG+TGG | - | chr1_3:43402748-43402767 | Msa0119440:CDS | 65.0% | |
| GTACCACCCGAAGGAGGAGG+AGG | + | chr1_3:43402754-43402773 | None:intergenic | 65.0% | |
| ACACGCCACACGCACGCACG+CGG | - | chr1_3:43400400-43400419 | Msa0119440:three_prime_UTR | 70.0% | |
| !! | TCCGGTTCTGGCTCCGGCAC+CGG | + | chr1_3:43400667-43400686 | None:intergenic | 70.0% |
| !! | TCCGGCTCCGGTTCTGGCTC+CGG | + | chr1_3:43400673-43400692 | None:intergenic | 70.0% |
| TCCTGCTCCGGCTCCGGTTC+TGG | + | chr1_3:43400679-43400698 | None:intergenic | 70.0% | |
| AGAACCGGAGCCGGAGCAGG+AGG | - | chr1_3:43400678-43400697 | Msa0119440:CDS | 70.0% | |
| GGACCGGACGAGGAGTTCGG+TGG | - | chr1_3:43400974-43400993 | Msa0119440:CDS | 70.0% | |
| ACGAGCTCGCCCTCGCCACA+TGG | + | chr1_3:43402534-43402553 | None:intergenic | 70.0% | |
| GGGGGAGTCTGTGCTGGAGC+AGG | + | chr1_3:43402727-43402746 | None:intergenic | 70.0% | |
| !! | GGTGACGGGGGAGTCTGTGC+TGG | + | chr1_3:43402733-43402752 | None:intergenic | 70.0% |
| ! | GCCGGTGCCGGAGCCAGAAC+CGG | - | chr1_3:43400663-43400682 | Msa0119440:CDS | 75.0% |
| GCCGGAGCCAGAACCGGAGC+CGG | - | chr1_3:43400669-43400688 | Msa0119440:CDS | 75.0% | |
| GCCAGAACCGGAGCCGGAGC+AGG | - | chr1_3:43400675-43400694 | Msa0119440:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 43400332 | 43403031 | 43400332 | ID=Msa0119440;Name=Msa0119440 |
| chr1_3 | mRNA | 43400332 | 43403031 | 43400332 | ID=Msa0119440-mRNA-1;Parent=Msa0119440;Name=Msa0119440-mRNA-1;_AED=0.24;_eAED=0.24;_QI=241|1|1|1|1|1|2|254|341 |
| chr1_3 | exon | 43400332 | 43401028 | 43400332 | ID=Msa0119440-mRNA-1:exon:13052;Parent=Msa0119440-mRNA-1 |
| chr1_3 | exon | 43402208 | 43403031 | 43402208 | ID=Msa0119440-mRNA-1:exon:13051;Parent=Msa0119440-mRNA-1 |
| chr1_3 | five_prime_UTR | 43402791 | 43403031 | 43402791 | ID=Msa0119440-mRNA-1:five_prime_utr;Parent=Msa0119440-mRNA-1 |
| chr1_3 | CDS | 43402208 | 43402790 | 43402208 | ID=Msa0119440-mRNA-1:cds;Parent=Msa0119440-mRNA-1 |
| chr1_3 | CDS | 43400586 | 43401028 | 43400586 | ID=Msa0119440-mRNA-1:cds;Parent=Msa0119440-mRNA-1 |
| chr1_3 | three_prime_UTR | 43400332 | 43400585 | 43400332 | ID=Msa0119440-mRNA-1:three_prime_utr;Parent=Msa0119440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
