AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0332790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0332790 MtrunA17_Chr2g0315891 99.793 966 2 0 1 966 1 966 0.0 1993
Msa0332790 MtrunA17_Chr8g0360571 90.900 967 87 1 1 966 1 967 0.0 1812
Msa0332790 MtrunA17_Chr2g0325821 85.124 968 140 3 1 966 1 966 0.0 1691
Msa0332790 MtrunA17_Chr4g0041131 84.161 966 150 2 2 966 3 966 0.0 1687
Msa0332790 MtrunA17_Chr1g0198921 45.048 626 291 6 359 966 449 1039 2.88e-167 516
Msa0332790 MtrunA17_Chr1g0198921 38.603 272 154 5 76 347 71 329 1.89e-48 187
Msa0332790 MtrunA17_Chr0c01g0489521 45.768 638 281 8 360 966 549 1152 1.44e-166 518
Msa0332790 MtrunA17_Chr0c01g0489521 32.682 358 207 8 33 369 62 406 1.39e-45 178
Msa0332790 MtrunA17_Chr1g0148101 60.053 378 85 7 461 838 1 312 2.25e-138 416
Msa0332790 MtrunA17_Chr1g0148111 45.455 132 30 4 337 428 9 138 1.52e-21 92.4
Msa0332790 MtrunA17_Chr1g0148091 82.353 51 9 0 916 966 1 51 1.64e-20 85.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0332790 AT1G53310.2 84.917 968 143 3 1 966 1 967 0.0 1710
Msa0332790 AT1G53310.1 84.917 968 143 3 1 966 1 967 0.0 1710
Msa0332790 AT1G53310.3 84.917 968 143 3 1 966 1 967 0.0 1710
Msa0332790 AT3G14940.1 85.036 969 141 4 1 966 1 968 0.0 1704
Msa0332790 AT3G14940.2 85.036 969 141 4 1 966 1 968 0.0 1704
Msa0332790 AT2G42600.2 83.230 966 156 5 2 966 3 963 0.0 1655
Msa0332790 AT2G42600.1 83.230 966 156 5 2 966 3 963 0.0 1655
Msa0332790 AT2G42600.3 83.230 966 156 5 2 966 3 963 0.0 1655
Msa0332790 AT1G68750.1 46.117 618 284 5 365 966 448 1032 3.07e-174 535
Msa0332790 AT1G68750.1 35.032 314 182 5 35 340 23 322 1.19e-46 182
Msa0332790 AT3G42628.1 83.721 43 7 0 2 44 3 45 2.17e-15 71.2

Find 249 sgRNAs with CRISPR-Local

Find 376 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAGAACACTGGTTAAATTT+TGG 0.162246 2_4:+50089650 Msa0332790:exon
ATTACCAAACATTTGGAAAT+TGG 0.181986 2_4:+50087577 Msa0332790:CDS
TTGAGGCAAGTTTCCACTTT+TGG 0.188224 2_4:+50087490 Msa0332790:CDS
TCAACACGGCGAAGAAATTT+AGG 0.190724 2_4:-50086483 None:intergenic
CCAAGCTCTTCAAGTTTCTT+AGG 0.203670 2_4:-50085736 None:intergenic
AGAGATCCGTGAATTGTTTC+TGG 0.211569 2_4:-50088153 None:intergenic
ACAATCAATGGCCTTTCTTT+AGG 0.212782 2_4:+50088822 Msa0332790:CDS
ATCTCTAATTTCATCGGTTT+GGG 0.213025 2_4:-50087689 None:intergenic
ATGATTGGATATTCTGATTC+AGG 0.219510 2_4:+50087964 Msa0332790:CDS
TGTAGGCTTGGAAAACATTA+AGG 0.228524 2_4:-50089449 None:intergenic
AACAACGGAACGACTCTTAA+TGG 0.230787 2_4:-50087844 None:intergenic
TTGAATAAGAGGAGCATTAT+AGG 0.231171 2_4:-50086544 None:intergenic
CAGCAGACTCTTTCGATATT+GGG 0.240167 2_4:-50089518 None:intergenic
AAGGCGCGCCATTCTGGTTT+TGG 0.252834 2_4:-50088297 None:intergenic
CAAAGGATCTGTGGCCATTT+GGG 0.253225 2_4:+50088924 Msa0332790:CDS
GTTACTTCCATGAAACAATT+TGG 0.256834 2_4:+50086451 Msa0332790:CDS
CAATCAATGGCCTTTCTTTA+GGG 0.264660 2_4:+50088823 Msa0332790:CDS
GTGAGGAACACTTGTGCTTT+AGG 0.265728 2_4:+50088217 Msa0332790:CDS
CCCAGCTCTCATTTCATCTT+GGG 0.269827 2_4:-50086424 None:intergenic
CATCTCTAATTTCATCGGTT+TGG 0.272165 2_4:-50087690 None:intergenic
TCCATCAAGGCGCGCCATTC+TGG 0.274267 2_4:-50088303 None:intergenic
CGCACCTCCACCTTGTAGTT+TGG 0.275418 2_4:-50089492 None:intergenic
ATCAAAGTCGCACAGAAATT+TGG 0.275537 2_4:+50088045 Msa0332790:CDS
CTCATTTCATCTTGGGGAGT+TGG 0.310060 2_4:-50086417 None:intergenic
CCGGTTAATGTACCAGTTTA+TGG 0.314247 2_4:-50087920 None:intergenic
TTGGTGAATGTGGCTTCTTC+AGG 0.316205 2_4:-50087236 None:intergenic
CCACTAGGCCTTCTCTTTGC+CGG 0.317888 2_4:-50088653 None:intergenic
TCAGCAGACTCTTTCGATAT+TGG 0.323283 2_4:-50089519 None:intergenic
TGCAGCATGGCAGCTATATA+AGG 0.339434 2_4:+50088008 Msa0332790:CDS
TCAAAGGATCTGTGGCCATT+TGG 0.340214 2_4:+50088923 Msa0332790:CDS
TACCATTGATTTAGTTGAAA+TGG 0.341150 2_4:+50088847 Msa0332790:CDS
GGATCCAATTTCCAAATGTT+TGG 0.341456 2_4:-50087581 None:intergenic
CACTTGTAAGGCTTGATATA+AGG 0.341882 2_4:+50087518 Msa0332790:CDS
GCAATTGATGTTATGTTTCA+AGG 0.346499 2_4:+50089863 Msa0332790:three_prime_UTR
CACCCTTCCAAATTGTTTCA+TGG 0.358578 2_4:-50086458 None:intergenic
TCCCAGCTCTCATTTCATCT+TGG 0.360325 2_4:-50086425 None:intergenic
TCTTCCATGATGCAGAGTTT+TGG 0.360614 2_4:+50087099 Msa0332790:intron
CCATAAACTGGTACATTAAC+CGG 0.360815 2_4:+50087920 Msa0332790:CDS
TGAGTATGATGCTTTGTTGT+TGG 0.361220 2_4:+50084970 Msa0332790:CDS
CTTTCTTCAACTTGTTCCTT+CGG 0.361856 2_4:-50085867 None:intergenic
GGATGCCATTACCAAACATT+TGG 0.362761 2_4:+50087570 Msa0332790:CDS
GCTCCAAAGCCCAGCCATAC+TGG 0.362870 2_4:-50088740 None:intergenic
GCCAGCAGCAATACCCTTCA+TGG 0.362914 2_4:-50089625 None:intergenic
CTTCCAGTATGGCTGGGCTT+TGG 0.367192 2_4:+50088737 Msa0332790:CDS
GTCACTTCAGGAGTCACTCT+TGG 0.368265 2_4:-50086697 None:intergenic
CCAGGAGCATATTCACTTGT+TGG 0.371381 2_4:-50089579 None:intergenic
ACCAGAATGGCGCGCCTTGA+TGG 0.372526 2_4:+50088302 Msa0332790:CDS
GTTTCATCTTCCAGTATGGC+TGG 0.372895 2_4:+50088730 Msa0332790:CDS
TGATGCACAGCTTAGGCAAT+TGG 0.373877 2_4:+50084913 Msa0332790:CDS
CAAGGTTTCATCTTCCAGTA+TGG 0.380324 2_4:+50088726 Msa0332790:CDS
CAAACATCCCTTGTCACTTC+AGG 0.380888 2_4:-50086709 None:intergenic
CTCGGTTGTTCTCCATAAAC+TGG 0.393509 2_4:+50087908 Msa0332790:CDS
CAAGAAGAAAATTGAATAAG+AGG 0.398627 2_4:-50086555 None:intergenic
CTTCTCAATTGTTCCCCAAA+TGG 0.401397 2_4:-50088938 None:intergenic
TGTACATCTCTTGCAGCATA+TGG 0.405277 2_4:-50088802 None:intergenic
CTGAGTCTTTGCTTCAAGTA+GGG 0.409192 2_4:-50089402 None:intergenic
TGAGTCTGCTCCTGCTGCAT+TGG 0.420359 2_4:+50087885 Msa0332790:CDS
AACTGCACCGTCTGATGTGC+TGG 0.422950 2_4:+50087783 Msa0332790:CDS
AATTTCCAAATGTTTGGTAA+TGG 0.423777 2_4:-50087575 None:intergenic
TGAATAAGAGGAGCATTATA+GGG 0.429569 2_4:-50086543 None:intergenic
TTGAACCTCTTCAGCTAAGT+TGG 0.434141 2_4:-50085833 None:intergenic
GAAGTTGCAAAACACTATAT+AGG 0.436809 2_4:+50086968 Msa0332790:CDS
GTATTGCAGCACTGAATGAT+AGG 0.437095 2_4:+50088891 Msa0332790:CDS
AACTAAGAAACTCCTACTTC+AGG 0.437226 2_4:+50088973 Msa0332790:CDS
ATTTCATCTTGGGGAGTTGG+TGG 0.438410 2_4:-50086414 None:intergenic
AAGTGAATATGCTCCTGGTT+TGG 0.445415 2_4:+50089584 Msa0332790:CDS
GAACTTCCATCTGACAACTT+TGG 0.446074 2_4:+50087739 Msa0332790:CDS
TCATTCAGTGCTGCAATACC+AGG 0.448349 2_4:-50088887 None:intergenic
CCTAAGAAACTTGAAGAGCT+TGG 0.450572 2_4:+50085736 Msa0332790:CDS
ATCCTACCATACTCCATCTC+TGG 0.451448 2_4:-50088614 None:intergenic
TCTCTTCGTGTGACAGTTCA+AGG 0.453254 2_4:+50088171 Msa0332790:CDS
TCATCGGTTTGGGGTAGGTC+AGG 0.455429 2_4:-50087679 None:intergenic
TTTCATAAGAATTTCACATC+AGG 0.459251 2_4:+50089794 Msa0332790:three_prime_UTR
TTGATCACAAGTTTCGATGC+AGG 0.461534 2_4:+50085763 Msa0332790:CDS
CACCATTTCAACTAAATCAA+TGG 0.462445 2_4:-50088849 None:intergenic
ACACGGTACGGTTCGTTCAA+AGG 0.463809 2_4:-50087131 None:intergenic
TCCGTTTCAATGTGTAGGCT+TGG 0.466175 2_4:-50089461 None:intergenic
CTTCGATGCTCACCTCCCTC+TGG 0.467942 2_4:-50086244 None:intergenic
CAACACGGCGAAGAAATTTA+GGG 0.471771 2_4:-50086482 None:intergenic
GTAGGCTTGGAAAACATTAA+GGG 0.474938 2_4:-50089448 None:intergenic
GCTACACCAGAGATGGAGTA+TGG 0.477983 2_4:+50088608 Msa0332790:CDS
CAAGTTAAGCATGTGTGAAA+AGG 0.479006 2_4:-50085809 None:intergenic
ATTTGTGTGGCAGCAAAGTA+AGG 0.479166 2_4:-50089833 None:intergenic
ATACCGTTCAATTGTGTTCA+AGG 0.481229 2_4:+50088353 Msa0332790:CDS
AACAACCGAGCCAATGCAGC+AGG 0.482906 2_4:-50087895 None:intergenic
AGCAGACTCTTTCGATATTG+GGG 0.485836 2_4:-50089517 None:intergenic
CTTCTTGCTTCCCATCGATC+CGG 0.486800 2_4:-50087939 None:intergenic
GGGAAGCAAGAAGTTATGAT+TGG 0.487828 2_4:+50087949 Msa0332790:CDS
TTCAACGTGAATGCAAAGTC+AGG 0.489074 2_4:+50087818 Msa0332790:CDS
TAAAACATCTCTAATTTCAT+CGG 0.489190 2_4:-50087695 None:intergenic
TCAAGCTCCTGCTTATCATC+AGG 0.491418 2_4:-50086212 None:intergenic
CGATACCATGGATCTTTGCC+TGG 0.492268 2_4:+50088696 Msa0332790:CDS
CACGGTCGCGGTGGAACTGT+TGG 0.493136 2_4:+50088087 Msa0332790:CDS
AACCGTACCGTGTTGTACTC+GGG 0.493990 2_4:+50087141 Msa0332790:CDS
CTTCCATGAAACAATTTGGA+AGG 0.494194 2_4:+50086455 Msa0332790:CDS
TGCTACAATGGCAAACAAGA+TGG 0.494492 2_4:+50084874 Msa0332790:exon
TCCAAGCCTACACATTGAAA+CGG 0.494703 2_4:+50089460 Msa0332790:CDS
AATGTTACAAGTTCATCAGC+TGG 0.496300 2_4:-50089552 None:intergenic
TACAAGTGACAGTCCAAAAG+TGG 0.497201 2_4:-50087503 None:intergenic
TTCGTATCTAACTAACTGTC+TGG 0.497500 2_4:+50084423 Msa0332790:five_prime_UTR
CTGCTCCTGCTGCATTGGCT+CGG 0.497705 2_4:+50087890 Msa0332790:CDS
TCTGAGTCTTTGCTTCAAGT+AGG 0.504272 2_4:-50089403 None:intergenic
TGTCTGAGTTGATTGGCAAA+AGG 0.504480 2_4:+50087644 Msa0332790:CDS
AAGAAGATGATGACAAGGAA+TGG 0.504736 2_4:-50084399 None:intergenic
TGCAAGAGATGTACAATCAA+TGG 0.505277 2_4:+50088810 Msa0332790:CDS
CTTGGCCAACTTAGCTGAAG+AGG 0.506190 2_4:+50085828 Msa0332790:CDS
CCCCAAGATGAAATGAGAGC+TGG 0.506531 2_4:+50086423 Msa0332790:CDS
CCAGCTCTCATTTCATCTTG+GGG 0.507737 2_4:-50086423 None:intergenic
CTCATCTACATTGGTGAATG+TGG 0.507953 2_4:-50087246 None:intergenic
GAACCGTACCGTGTTGTACT+CGG 0.508804 2_4:+50087140 Msa0332790:CDS
TTCCTCAATGTCAGATTCAG+TGG 0.510077 2_4:-50085917 None:intergenic
GATATTCTTCAAGATTTACA+TGG 0.511585 2_4:+50085004 Msa0332790:CDS
TGGTACATTAACCGGATCGA+TGG 0.513122 2_4:+50087928 Msa0332790:CDS
CTTTGCTTCAAAAGCACGGA+AGG 0.514278 2_4:+50086058 Msa0332790:CDS
TCCTCTTGATTTCGTCAGTA+CGG 0.514919 2_4:-50086389 None:intergenic
ACCATGAAGGGTATTGCTGC+TGG 0.516969 2_4:+50089624 Msa0332790:CDS
CGCGGTGGAACTGTTGGAAG+AGG 0.518552 2_4:+50088093 Msa0332790:CDS
TTTCATCTTCCAGTATGGCT+GGG 0.519119 2_4:+50088731 Msa0332790:CDS
CACACTCATTCTTACCATGA+AGG 0.519808 2_4:+50089611 Msa0332790:CDS
CATCACTCCTGATGATAAGC+AGG 0.520519 2_4:+50086205 Msa0332790:CDS
AGTTGAAATGGTGTTTGCCA+AGG 0.521758 2_4:+50088859 Msa0332790:CDS
TAATTTCATCGGTTTGGGGT+AGG 0.523103 2_4:-50087684 None:intergenic
GAAGTTATTGAACAGTCGTT+CGG 0.523330 2_4:+50088195 Msa0332790:CDS
TCTGATTCAGGAAAAGATGC+TGG 0.523409 2_4:+50087976 Msa0332790:CDS
GCACACAAGGAAGTTCTTGA+AGG 0.526801 2_4:+50089375 Msa0332790:CDS
ATGAGTGTGTCTTCCAAACC+AGG 0.529085 2_4:-50089597 None:intergenic
CGAAGGAACAAGTTGAAGAA+AGG 0.530849 2_4:+50085868 Msa0332790:CDS
TAAGAACAAGATCAACAGTC+TGG 0.531606 2_4:-50086005 None:intergenic
TTCAAATTGCGCACCGCCGA+AGG 0.532162 2_4:+50085851 Msa0332790:CDS
AAATTGGATCCTACCAAGAA+TGG 0.533268 2_4:+50087593 Msa0332790:CDS
TTCTTCAGACCATTCTTGGT+AGG 0.534096 2_4:-50087602 None:intergenic
TACAGATCACTCTGTGCTTG+TGG 0.534200 2_4:+50087430 Msa0332790:CDS
TACTGCTCATCCTACTCAGT+CGG 0.534850 2_4:+50086026 Msa0332790:CDS
GAAGCCTTCTTGATTTCTTG+AGG 0.535692 2_4:+50087473 Msa0332790:CDS
ATGAAACCTTGTCTGTGTCC+AGG 0.535981 2_4:-50088714 None:intergenic
CATCAATTGATGCACAGCTT+AGG 0.536519 2_4:+50084906 Msa0332790:CDS
ATTTAGACAAGTTGTTCAGA+AGG 0.538330 2_4:+50088766 Msa0332790:CDS
CAAGCTCTCCAAAACCAGAA+TGG 0.538343 2_4:+50088289 Msa0332790:CDS
CCCAAGATGAAATGAGAGCT+GGG 0.539205 2_4:+50086424 Msa0332790:CDS
TGATAGGCTCCTAGTTTCAA+AGG 0.540755 2_4:+50088907 Msa0332790:CDS
TCTGTAGGTGGCTGCACACA+AGG 0.542762 2_4:+50089362 Msa0332790:intron
TCTTCAAGATTTACATGGAG+AGG 0.543567 2_4:+50085009 Msa0332790:CDS
GGAACTGTTGGAAGAGGAGG+TGG 0.544976 2_4:+50088099 Msa0332790:CDS
TTGAGACAAGATGGCAAGAT+GGG 0.545915 2_4:-50088127 None:intergenic
ATGATGCTTTGTTGTTGGAT+CGG 0.546489 2_4:+50084975 Msa0332790:CDS
CATGAAGAAATCTCCTCAAG+AGG 0.546739 2_4:+50085963 Msa0332790:CDS
TGCAATACCAGGGTCTCCCT+TGG 0.546742 2_4:-50088876 None:intergenic
TCTCGTTATCTCCTAGCTCA+TGG 0.547220 2_4:+50087200 Msa0332790:CDS
ATACAGCATTGAAGAACATA+GGG 0.548371 2_4:+50086505 Msa0332790:CDS
GCCACAGATCCTTTGAAACT+AGG 0.548768 2_4:-50088916 None:intergenic
TTCCATGAAACAATTTGGAA+GGG 0.549164 2_4:+50086456 Msa0332790:CDS
ATGGCAGCTATATAAGGCTC+AGG 0.549987 2_4:+50088014 Msa0332790:CDS
AAGCATGTGTGAAAAGGACT+TGG 0.550629 2_4:-50085803 None:intergenic
GTGTTGTACTCGGGGAGGTG+AGG 0.551990 2_4:+50087150 Msa0332790:CDS
CGAAGAAGAAGATGATGACA+AGG 0.555023 2_4:-50084404 None:intergenic
TCAATGGTAACCCTAAAGAA+AGG 0.555161 2_4:-50088833 None:intergenic
CCAACAAGTGAATATGCTCC+TGG 0.558319 2_4:+50089579 Msa0332790:CDS
TTCTGGTGGTTGAGACAAGA+TGG 0.559083 2_4:-50088136 None:intergenic
CACCAGAGATGGAGTATGGT+AGG 0.560221 2_4:+50088612 Msa0332790:CDS
GATACAGCATTGAAGAACAT+AGG 0.560949 2_4:+50086504 Msa0332790:CDS
AAACACTGCGTGCGATACCA+TGG 0.561957 2_4:+50088684 Msa0332790:CDS
GTTGAAATGGTGTTTGCCAA+GGG 0.562085 2_4:+50088860 Msa0332790:CDS
GATCTGTAGCAGAGTTCAAG+AGG 0.564012 2_4:-50087415 None:intergenic
GTTGAGACAAGATGGCAAGA+TGG 0.564755 2_4:-50088128 None:intergenic
GAGTATGGTAGGATGAACAT+TGG 0.564836 2_4:+50088623 Msa0332790:CDS
AAAGGATCTGTGGCCATTTG+GGG 0.569913 2_4:+50088925 Msa0332790:CDS
CATGTAGGCTACACCAGAGA+TGG 0.570904 2_4:+50088601 Msa0332790:intron
GAAGTCGACCGGCAAAGAGA+AGG 0.572412 2_4:+50088645 Msa0332790:CDS
CAACCACCAGAAACAATTCA+CGG 0.572783 2_4:+50088147 Msa0332790:CDS
TCATCAAGCTTCTCAAACAA+CGG 0.575573 2_4:-50087859 None:intergenic
TTTCACAATAGCCATGAGCT+AGG 0.576636 2_4:-50087211 None:intergenic
AATATATACCTCATCTACAT+TGG 0.576772 2_4:-50087255 None:intergenic
TGAGTCTTTGCTTCAAGTAG+GGG 0.576932 2_4:-50089401 None:intergenic
TTCGCGCAGAAGAACTTCAC+AGG 0.577091 2_4:+50086930 Msa0332790:CDS
GTGTTTGCCAAGGGAGACCC+TGG 0.577526 2_4:+50088869 Msa0332790:CDS
GTGATCTCAAGTAGTGAAGT+GGG 0.577798 2_4:-50084350 None:intergenic
TGTTTCTTTAGCTTTCTATG+TGG 0.578871 2_4:+50086885 Msa0332790:intron
TCTTCAACTTGTTCCTTCGG+CGG 0.579027 2_4:-50085864 None:intergenic
GACAGCCATCTGATCCATCA+AGG 0.579385 2_4:-50088316 None:intergenic
GATCGACGAACCGACTGAGT+AGG 0.579937 2_4:-50086036 None:intergenic
TGTTGTACTCGGGGAGGTGA+GGG 0.580569 2_4:+50087151 Msa0332790:CDS
GCAGACTCTTTCGATATTGG+GGG 0.583884 2_4:-50089516 None:intergenic
TTTACATGGAGAGGATCTGA+AGG 0.584089 2_4:+50085018 Msa0332790:CDS
TGGAGCCTACATCATTTCGA+TGG 0.584899 2_4:+50087759 Msa0332790:CDS
GATGAACATTGGAAGTCGAC+CGG 0.586163 2_4:+50088634 Msa0332790:CDS
TAGGCTCCAAAGTTGTCAGA+TGG 0.586422 2_4:-50087745 None:intergenic
GCGGATCCGTTTCAATGTGT+AGG 0.586950 2_4:-50089466 None:intergenic
CGATCTTTGCTTCAAAAGCA+CGG 0.588433 2_4:+50086054 Msa0332790:CDS
GGGTTGTAATGTACGAATCA+CGG 0.589479 2_4:-50089428 None:intergenic
GAGTGACTCCTGAAGTGACA+AGG 0.590847 2_4:+50086701 Msa0332790:CDS
AATTGCATAACTCATTTGTG+TGG 0.591035 2_4:-50089846 None:intergenic
TGTGTCCAGGCAAAGATCCA+TGG 0.592206 2_4:-50088701 None:intergenic
AAAGGATCATTACCTGAAGT+AGG 0.593460 2_4:-50088985 None:intergenic
AGTGTTTCAATGCCTCCACT+AGG 0.593577 2_4:-50088668 None:intergenic
TTGCTTACTAGCTAGAATGA+TGG 0.599592 2_4:+50086729 Msa0332790:CDS
CACATTCACCAATGTAGATG+AGG 0.599597 2_4:+50087247 Msa0332790:CDS
CTAACCATGTTCCACGGTCG+CGG 0.600398 2_4:+50088075 Msa0332790:CDS
GGTACATTAACCGGATCGAT+GGG 0.600405 2_4:+50087929 Msa0332790:CDS
ATTTCTGTGCGACTTTGATG+AGG 0.601219 2_4:-50088041 None:intergenic
GGTGATCGTGCAATTGCTGA+TGG 0.602213 2_4:+50087451 Msa0332790:CDS
GTTCCTTGAACACAATTGAA+CGG 0.603885 2_4:-50088356 None:intergenic
TCCTAGTTTCAAAGGATCTG+TGG 0.604284 2_4:+50088915 Msa0332790:CDS
TCTTTGCCTGGACACAGACA+AGG 0.604450 2_4:+50088708 Msa0332790:CDS
AGTTGCCATCGAAATGATGT+AGG 0.605308 2_4:-50087764 None:intergenic
CAACAGTTCCACCGCGACCG+TGG 0.605980 2_4:-50088086 None:intergenic
CGATCCAAACTACAAGGTGG+AGG 0.607429 2_4:+50089488 Msa0332790:CDS
TCCACCGCGACCGTGGAACA+TGG 0.607947 2_4:-50088079 None:intergenic
GATCCGTGAATTGTTTCTGG+TGG 0.607988 2_4:-50088150 None:intergenic
ACACTCATTCTTACCATGAA+GGG 0.609673 2_4:+50089612 Msa0332790:CDS
AGCTTGATGAAGCTCTCCAG+AGG 0.609755 2_4:+50086228 Msa0332790:CDS
GCGCGCCTTGATGGATCAGA+TGG 0.612286 2_4:+50088311 Msa0332790:CDS
GGTGGAACTGTTGGAAGAGG+AGG 0.614237 2_4:+50088096 Msa0332790:CDS
GCTTGATGAAGCTCTCCAGA+GGG 0.616659 2_4:+50086229 Msa0332790:CDS
CTTGCCTCAAGAAATCAAGA+AGG 0.616842 2_4:-50087477 None:intergenic
ATTCAGGAAAAGATGCTGGA+AGG 0.617924 2_4:+50087980 Msa0332790:CDS
CCACCTTGTAGTTTGGATCG+CGG 0.620237 2_4:-50089485 None:intergenic
TCCCCGAGTACAACACGGTA+CGG 0.621017 2_4:-50087143 None:intergenic
TAACTGTCTGGCACACAACA+CGG 0.621667 2_4:+50084435 Msa0332790:five_prime_UTR
AACCACTGAATCTGACATTG+AGG 0.621933 2_4:+50085915 Msa0332790:CDS
CGGAAATACTCAACAAAACG+TGG 0.626014 2_4:-50088378 None:intergenic
GAGAGAGTGAATTGCTACAA+TGG 0.628226 2_4:+50084862 Msa0332790:exon
TCCGTACTGACGAAATCAAG+AGG 0.630724 2_4:+50086388 Msa0332790:CDS
TCTCTAATTTCATCGGTTTG+GGG 0.631731 2_4:-50087688 None:intergenic
GCTGCTGGCATGCAGAACAC+TGG 0.632380 2_4:+50089639 Msa0332790:CDS
CAGACTCTTTCGATATTGGG+GGG 0.632969 2_4:-50089515 None:intergenic
TGATCGTCACACTGACGTGA+TGG 0.635177 2_4:+50087549 Msa0332790:CDS
GATGGCTGTCATTGCAACTG+AGG 0.638513 2_4:+50088329 Msa0332790:CDS
TGTGATCTCAAGTAGTGAAG+TGG 0.638532 2_4:-50084351 None:intergenic
CCGGCAAAGAGAAGGCCTAG+TGG 0.639979 2_4:+50088653 Msa0332790:CDS
TCAACTGCCAGCACATCAGA+CGG 0.641429 2_4:-50087790 None:intergenic
TGATGAAGCTCTCCAGAGGG+AGG 0.642322 2_4:+50086232 Msa0332790:CDS
ACCATGTTCCACGGTCGCGG+TGG 0.646894 2_4:+50088078 Msa0332790:CDS
GATCCGCGATCCAAACTACA+AGG 0.647005 2_4:+50089482 Msa0332790:CDS
GACAAGATGGCAAGATGGGT+AGG 0.649004 2_4:-50088123 None:intergenic
ACCGTACCGTGTTGTACTCG+GGG 0.651324 2_4:+50087142 Msa0332790:CDS
AGTGACTCCTGAAGTGACAA+GGG 0.652460 2_4:+50086702 Msa0332790:CDS
GCAGCTATATAAGGCTCAGG+AGG 0.660561 2_4:+50088017 Msa0332790:CDS
TATTGAACAGTCGTTCGGTG+AGG 0.665155 2_4:+50088200 Msa0332790:CDS
CATTCAGTGCTGCAATACCA+GGG 0.670199 2_4:-50088886 None:intergenic
ACTGCTGCTACTCTAGAACA+TGG 0.671177 2_4:+50088255 Msa0332790:CDS
TCTTCAATGCTGTATCAACA+CGG 0.676820 2_4:-50086497 None:intergenic
GTTAAGCTAACCATGTTCCA+CGG 0.677295 2_4:+50088069 Msa0332790:CDS
GCAAAGAGAAGGCCTAGTGG+AGG 0.689359 2_4:+50088656 Msa0332790:CDS
TCACCTCCCCGAGTACAACA+CGG 0.690331 2_4:-50087148 None:intergenic
ATGGAAGTTCTGCTATGACA+CGG 0.698167 2_4:-50087726 None:intergenic
CCGCGATCCAAACTACAAGG+TGG 0.710588 2_4:+50089485 Msa0332790:CDS
TGGATGGGTGGTGATCGTGA+CGG 0.713188 2_4:+50086576 Msa0332790:CDS
TGATCTCAAGTAGTGAAGTG+GGG 0.744479 2_4:-50084349 None:intergenic
GTACCGTGTTGTACTCGGGG+AGG 0.761838 2_4:+50087145 Msa0332790:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGAAAAATAATTTAAACAA+TGG - chr2_4:50084786-50084805 None:intergenic 10.0%
!!! ACAAGATTATATTTTTAAAT+TGG - chr2_4:50086333-50086352 None:intergenic 10.0%
!! TTAAAAAAAAAAATCTTGAA+AGG + chr2_4:50086999-50087018 Msa0332790:intron 10.0%
!! TAAAAAAAAAAATCTTGAAA+GGG + chr2_4:50087000-50087019 Msa0332790:intron 10.0%
!!! TAAAAAAAGTACAATAACAT+AGG - chr2_4:50084573-50084592 None:intergenic 15.0%
!!! ATTGAATTTTGTGTTTTTAT+AGG + chr2_4:50084838-50084857 Msa0332790:intron 15.0%
!!! GTTCTTTAATTTTAATCATT+TGG + chr2_4:50085066-50085085 Msa0332790:intron 15.0%
!!! TATTGATTTGTAATGTTTTA+AGG + chr2_4:50085217-50085236 Msa0332790:intron 15.0%
!! AAAAATAAAATACTAAACAC+TGG - chr2_4:50085315-50085334 None:intergenic 15.0%
!! TATATACATGCATAAATATA+TGG - chr2_4:50086623-50086642 None:intergenic 15.0%
!! ATAAAATGACATTCAAATTA+GGG - chr2_4:50088488-50088507 None:intergenic 15.0%
!!! AAAGTTTGTAATTTTATTCA+AGG + chr2_4:50088523-50088542 Msa0332790:intron 15.0%
!! AAAAATTGTTATAACCTAAA+AGG - chr2_4:50088566-50088585 None:intergenic 15.0%
!! CAATATATTTACATAGTAAA+AGG - chr2_4:50089006-50089025 None:intergenic 15.0%
!!! TATATTGAACATTTTAGTTT+TGG + chr2_4:50089019-50089038 Msa0332790:intron 15.0%
!!! TCTATTTTTGTAGCATATAT+TGG - chr2_4:50084263-50084282 None:intergenic 20.0%
!!! TCAATCTCTTTCATAATTTT+CGG + chr2_4:50084685-50084704 Msa0332790:intron 20.0%
!! TTTCGAATATACGTTTAATT+AGG + chr2_4:50085351-50085370 Msa0332790:intron 20.0%
!! AATGTAACATCATTTCAATT+CGG - chr2_4:50086296-50086315 None:intergenic 20.0%
!!! ATATAATCTTGTGTTACTTT+TGG + chr2_4:50086341-50086360 Msa0332790:intron 20.0%
!!! TCTCATTTTTTAAATCACAT+TGG - chr2_4:50086657-50086676 None:intergenic 20.0%
!! AATGAGATATTATATTATCC+AGG + chr2_4:50086670-50086689 Msa0332790:intron 20.0%
!! AAAACGTTTAATTACAAAAG+GGG - chr2_4:50086822-50086841 None:intergenic 20.0%
!! CAAAACGTTTAATTACAAAA+GGG - chr2_4:50086823-50086842 None:intergenic 20.0%
!! TCAAAACGTTTAATTACAAA+AGG - chr2_4:50086824-50086843 None:intergenic 20.0%
!! AAGAAAAGAAATCAGTTAAA+TGG - chr2_4:50086866-50086885 None:intergenic 20.0%
!!! ACTATATACAGTACTTTTTA+TGG + chr2_4:50087288-50087307 Msa0332790:intron 20.0%
!! TAAAACATCTCTAATTTCAT+CGG - chr2_4:50087698-50087717 None:intergenic 20.0%
!! TAAAATGACATTCAAATTAG+GGG - chr2_4:50088487-50088506 None:intergenic 20.0%
!! CATAAAATGACATTCAAATT+AGG - chr2_4:50088489-50088508 None:intergenic 20.0%
!!! ACAAACATATTTAACCTTTT+AGG + chr2_4:50088549-50088568 Msa0332790:intron 20.0%
!!! AGTTTTGGAACAATTTTTAA+CGG + chr2_4:50089034-50089053 Msa0332790:intron 20.0%
!! ATGTTATAAGCACTTAATTA+AGG + chr2_4:50089278-50089297 Msa0332790:intron 20.0%
!!! GAGCTAATTTTTGTATTTTT+CGG + chr2_4:50089337-50089356 Msa0332790:intron 20.0%
! CATAGGATTTATATTATCCT+AGG - chr2_4:50084556-50084575 None:intergenic 25.0%
!! CAATCTCTTTCATAATTTTC+GGG + chr2_4:50084686-50084705 Msa0332790:intron 25.0%
! TGAACACAAAACAAAATCAA+GGG - chr2_4:50084751-50084770 None:intergenic 25.0%
! ATGAACACAAAACAAAATCA+AGG - chr2_4:50084752-50084771 None:intergenic 25.0%
!!! TTGATTTTGTTTTGTGTTCA+TGG + chr2_4:50084751-50084770 Msa0332790:intron 25.0%
!! TATGTGTTATGTTTTCATGA+AGG + chr2_4:50084812-50084831 Msa0332790:intron 25.0%
!! ATGTGTTATGTTTTCATGAA+GGG + chr2_4:50084813-50084832 Msa0332790:intron 25.0%
! GATATTCTTCAAGATTTACA+TGG + chr2_4:50085004-50085023 Msa0332790:CDS 25.0%
!!! GGTTCTAAAAGTCAATAATA+TGG + chr2_4:50085127-50085146 Msa0332790:intron 25.0%
! CTAAAAGTCAATAATATGGT+TGG + chr2_4:50085131-50085150 Msa0332790:intron 25.0%
!! TTGATTCTTTTGACAGATTT+TGG + chr2_4:50085179-50085198 Msa0332790:intron 25.0%
!! TTTGACAGATTTTGGATATT+AGG + chr2_4:50085187-50085206 Msa0332790:intron 25.0%
! GATATGAAACATGAACTATT+AGG + chr2_4:50085385-50085404 Msa0332790:intron 25.0%
! AAATCAAACAAAATCGAGAA+AGG - chr2_4:50086270-50086289 None:intergenic 25.0%
! CAAGAAGAAAATTGAATAAG+AGG - chr2_4:50086558-50086577 None:intergenic 25.0%
!! CTCTTATTCAATTTTCTTCT+TGG + chr2_4:50086556-50086575 Msa0332790:CDS 25.0%
!! TATTCAATTTTCTTCTTGGA+TGG + chr2_4:50086560-50086579 Msa0332790:CDS 25.0%
!! ATTCAATTTTCTTCTTGGAT+GGG + chr2_4:50086561-50086580 Msa0332790:CDS 25.0%
! TAATTACAAAAGGGGAAAAT+GGG - chr2_4:50086814-50086833 None:intergenic 25.0%
! TTAATTACAAAAGGGGAAAA+TGG - chr2_4:50086815-50086834 None:intergenic 25.0%
! AATATATACCTCATCTACAT+TGG - chr2_4:50087258-50087277 None:intergenic 25.0%
! TAACTCTAGTTAGTATCTTT+CGG - chr2_4:50087376-50087395 None:intergenic 25.0%
! AATTTCCAAATGTTTGGTAA+TGG - chr2_4:50087578-50087597 None:intergenic 25.0%
! ATTACCAAACATTTGGAAAT+TGG + chr2_4:50087577-50087596 Msa0332790:CDS 25.0%
! AGTAAAGTGACATTCAAATT+AGG + chr2_4:50088444-50088463 Msa0332790:intron 25.0%
! GTAAAGTGACATTCAAATTA+GGG + chr2_4:50088445-50088464 Msa0332790:intron 25.0%
!!! ATTTGAATGTCATTTTATGC+AGG + chr2_4:50088490-50088509 Msa0332790:intron 25.0%
!!! TACCATTGATTTAGTTGAAA+TGG + chr2_4:50088847-50088866 Msa0332790:CDS 25.0%
! ATAAGCTGAAAATAGTTTAC+AGG - chr2_4:50089153-50089172 None:intergenic 25.0%
!! AGTGTTTTCATAAGTTATTC+TGG - chr2_4:50089189-50089208 None:intergenic 25.0%
! CAACAAATTAAGACTCTATT+TGG - chr2_4:50089311-50089330 None:intergenic 25.0%
!!! CAAATAGAGTCTTAATTTGT+TGG + chr2_4:50089309-50089328 Msa0332790:intron 25.0%
! TTTCATAAGAATTTCACATC+AGG + chr2_4:50089794-50089813 Msa0332790:three_prime_UTR 25.0%
! ATAGCATAACATGTTTTCCT+AGG + chr2_4:50084536-50084555 Msa0332790:intron 30.0%
GACATGTTGAATATCATCAA+TGG - chr2_4:50084667-50084686 None:intergenic 30.0%
CGGGATTTGATTAGAATTTA+TGG + chr2_4:50084705-50084724 Msa0332790:intron 30.0%
GAACACAAAACAAAATCAAG+GGG - chr2_4:50084750-50084769 None:intergenic 30.0%
GATCTTGATTATTCACTGTT+TGG + chr2_4:50085106-50085125 Msa0332790:intron 30.0%
AAGTCAATAATATGGTTGGT+TGG + chr2_4:50085135-50085154 Msa0332790:intron 30.0%
AACAGAAAAAAGACCTTTAG+AGG + chr2_4:50085270-50085289 Msa0332790:intron 30.0%
ACAGAAAAAAGACCTTTAGA+GGG + chr2_4:50085271-50085290 Msa0332790:intron 30.0%
TGTTATTGTTCTGTGATACA+CGG + chr2_4:50085513-50085532 Msa0332790:intron 30.0%
! GAATGACGGAAAATAATTGT+TGG - chr2_4:50085572-50085591 None:intergenic 30.0%
! AGTTGAAGAAAGGTGATTTT+AGG + chr2_4:50085878-50085897 Msa0332790:CDS 30.0%
! GTTGAAGAAAGGTGATTTTA+GGG + chr2_4:50085879-50085898 Msa0332790:CDS 30.0%
GTTACTTCCATGAAACAATT+TGG + chr2_4:50086451-50086470 Msa0332790:CDS 30.0%
TTCCATGAAACAATTTGGAA+GGG + chr2_4:50086456-50086475 Msa0332790:CDS 30.0%
! ATACAGCATTGAAGAACATA+GGG + chr2_4:50086505-50086524 Msa0332790:CDS 30.0%
!! TGAATAAGAGGAGCATTATA+GGG - chr2_4:50086546-50086565 None:intergenic 30.0%
!! TTGAATAAGAGGAGCATTAT+AGG - chr2_4:50086547-50086566 None:intergenic 30.0%
!! TGTTTCTTTAGCTTTCTATG+TGG + chr2_4:50086885-50086904 Msa0332790:intron 30.0%
! TTTTGCAACTTCATCTTTCT+TGG - chr2_4:50086960-50086979 None:intergenic 30.0%
GAAGTTGCAAAACACTATAT+AGG + chr2_4:50086968-50086987 Msa0332790:CDS 30.0%
!! GAGTTAATTTGTGTAGTTTC+TGG + chr2_4:50087390-50087409 Msa0332790:intron 30.0%
!!! TTTTTTCTTCAGACCATTCT+TGG - chr2_4:50087609-50087628 None:intergenic 30.0%
!! ATCTCTAATTTCATCGGTTT+GGG - chr2_4:50087692-50087711 None:intergenic 30.0%
ATGATTGGATATTCTGATTC+AGG + chr2_4:50087964-50087983 Msa0332790:CDS 30.0%
! ATTTTTGATGTCTTACCAGA+CGG - chr2_4:50088401-50088420 None:intergenic 30.0%
ATTTAGACAAGTTGTTCAGA+AGG + chr2_4:50088766-50088785 Msa0332790:CDS 30.0%
CACCATTTCAACTAAATCAA+TGG - chr2_4:50088852-50088871 None:intergenic 30.0%
! GAACAATTTTTAACGGTCAA+GGG + chr2_4:50089041-50089060 Msa0332790:intron 30.0%
!!! AGACTGTTTTAAAGATCTGA+TGG + chr2_4:50089110-50089129 Msa0332790:intron 30.0%
!! TTGTATTTTTCGGTATCTGT+AGG + chr2_4:50089347-50089366 Msa0332790:intron 30.0%
!! AATTTCACATCAGGTTTTGT+TGG + chr2_4:50089803-50089822 Msa0332790:three_prime_UTR 30.0%
AATTGCATAACTCATTTGTG+TGG - chr2_4:50089849-50089868 None:intergenic 30.0%
GCAATTGATGTTATGTTTCA+AGG + chr2_4:50089863-50089882 Msa0332790:three_prime_UTR 30.0%
GAATGGAAAAATGGATCAGA+AGG - chr2_4:50084385-50084404 None:intergenic 35.0%
GATGACAAGGAATGGAAAAA+TGG - chr2_4:50084394-50084413 None:intergenic 35.0%
AAGAAGATGATGACAAGGAA+TGG - chr2_4:50084402-50084421 None:intergenic 35.0%
TTCGTATCTAACTAACTGTC+TGG + chr2_4:50084423-50084442 Msa0332790:five_prime_UTR 35.0%
CACGTGTACATAAACATACT+AGG - chr2_4:50084640-50084659 None:intergenic 35.0%
GGCAAACAAGATGGAAAAAA+TGG + chr2_4:50084883-50084902 Msa0332790:CDS 35.0%
! TGAGTATGATGCTTTGTTGT+TGG + chr2_4:50084970-50084989 Msa0332790:CDS 35.0%
!! ATGATGCTTTGTTGTTGGAT+CGG + chr2_4:50084975-50084994 Msa0332790:CDS 35.0%
TCTTCAAGATTTACATGGAG+AGG + chr2_4:50085009-50085028 Msa0332790:CDS 35.0%
!! GGTTGGTGAGAAAAAAAGAT+TGG + chr2_4:50085152-50085171 Msa0332790:intron 35.0%
! CAGAAAAAAGACCTTTAGAG+GGG + chr2_4:50085272-50085291 Msa0332790:intron 35.0%
AAACATGAACTATTAGGCCT+TGG + chr2_4:50085391-50085410 Msa0332790:intron 35.0%
CAAGCATCTGAACAGAAAAT+TGG - chr2_4:50085441-50085460 None:intergenic 35.0%
TCGAACTTATAGCTGCTATT+CGG - chr2_4:50085488-50085507 None:intergenic 35.0%
GTGTTGTCAATTGTGAATGA+CGG - chr2_4:50085586-50085605 None:intergenic 35.0%
TCATTCACAATTGACAACAC+TGG + chr2_4:50085586-50085605 Msa0332790:intron 35.0%
CATTCACAATTGACAACACT+GGG + chr2_4:50085587-50085606 Msa0332790:intron 35.0%
!!! GACGGAATCTTTTTTCTTCA+CGG + chr2_4:50085633-50085652 Msa0332790:intron 35.0%
CAAGTTAAGCATGTGTGAAA+AGG - chr2_4:50085812-50085831 None:intergenic 35.0%
! CTTTTCACACATGCTTAACT+TGG + chr2_4:50085810-50085829 Msa0332790:CDS 35.0%
! CTTTCTTCAACTTGTTCCTT+CGG - chr2_4:50085870-50085889 None:intergenic 35.0%
AATGCATCAAAAACCTCTTG+AGG - chr2_4:50085979-50085998 None:intergenic 35.0%
TAAGAACAAGATCAACAGTC+TGG - chr2_4:50086008-50086027 None:intergenic 35.0%
!! ACTTTGTTTGTTCTTTTCGC+AGG + chr2_4:50086147-50086166 Msa0332790:intron 35.0%
!! CTTTGTTTGTTCTTTTCGCA+GGG + chr2_4:50086148-50086167 Msa0332790:intron 35.0%
CTTCCATGAAACAATTTGGA+AGG + chr2_4:50086455-50086474 Msa0332790:CDS 35.0%
TCTTCAATGCTGTATCAACA+CGG - chr2_4:50086500-50086519 None:intergenic 35.0%
! GATACAGCATTGAAGAACAT+AGG + chr2_4:50086504-50086523 Msa0332790:CDS 35.0%
TTGCTTACTAGCTAGAATGA+TGG + chr2_4:50086729-50086748 Msa0332790:CDS 35.0%
! TTTTCCAAAACTCTGCATCA+TGG - chr2_4:50087106-50087125 None:intergenic 35.0%
CACTTGTAAGGCTTGATATA+AGG + chr2_4:50087518-50087537 Msa0332790:CDS 35.0%
GGATCCAATTTCCAAATGTT+TGG - chr2_4:50087584-50087603 None:intergenic 35.0%
AAATTGGATCCTACCAAGAA+TGG + chr2_4:50087593-50087612 Msa0332790:CDS 35.0%
ATGGTCTGAAGAAAAAAGAC+AGG + chr2_4:50087612-50087631 Msa0332790:CDS 35.0%
CTGAAGAAAAAAGACAGGAA+TGG + chr2_4:50087617-50087636 Msa0332790:CDS 35.0%
!! TCTCTAATTTCATCGGTTTG+GGG - chr2_4:50087691-50087710 None:intergenic 35.0%
! CATCTCTAATTTCATCGGTT+TGG - chr2_4:50087693-50087712 None:intergenic 35.0%
TCATCAAGCTTCTCAAACAA+CGG - chr2_4:50087862-50087881 None:intergenic 35.0%
CCATAAACTGGTACATTAAC+CGG + chr2_4:50087920-50087939 Msa0332790:CDS 35.0%
ATCAAAGTCGCACAGAAATT+TGG + chr2_4:50088045-50088064 Msa0332790:CDS 35.0%
GAAGTTATTGAACAGTCGTT+CGG + chr2_4:50088195-50088214 Msa0332790:CDS 35.0%
ATACCGTTCAATTGTGTTCA+AGG + chr2_4:50088353-50088372 Msa0332790:CDS 35.0%
GTTCCTTGAACACAATTGAA+CGG - chr2_4:50088359-50088378 None:intergenic 35.0%
! TTTTGTTGAGTATTTCCGTC+TGG + chr2_4:50088383-50088402 Msa0332790:CDS 35.0%
GTCAACTTTATGTGTCATGT+AGG + chr2_4:50088586-50088605 Msa0332790:intron 35.0%
TGCAAGAGATGTACAATCAA+TGG + chr2_4:50088810-50088829 Msa0332790:CDS 35.0%
ACAATCAATGGCCTTTCTTT+AGG + chr2_4:50088822-50088841 Msa0332790:CDS 35.0%
CAATCAATGGCCTTTCTTTA+GGG + chr2_4:50088823-50088842 Msa0332790:CDS 35.0%
TCAATGGTAACCCTAAAGAA+AGG - chr2_4:50088836-50088855 None:intergenic 35.0%
AACTAAGAAACTCCTACTTC+AGG + chr2_4:50088973-50088992 Msa0332790:CDS 35.0%
AAAGGATCATTACCTGAAGT+AGG - chr2_4:50088988-50089007 None:intergenic 35.0%
! GGAACAATTTTTAACGGTCA+AGG + chr2_4:50089040-50089059 Msa0332790:intron 35.0%
ACCTATCTGAACTTATCTAC+TGG + chr2_4:50089077-50089096 Msa0332790:intron 35.0%
GATCTGATGGAAATAGCTTA+TGG + chr2_4:50089123-50089142 Msa0332790:intron 35.0%
! AAGTTATTCTGGAGAGCTTA+CGG - chr2_4:50089178-50089197 None:intergenic 35.0%
!! TATTTTTCGGTATCTGTAGG+TGG + chr2_4:50089350-50089369 Msa0332790:intron 35.0%
GTAGGCTTGGAAAACATTAA+GGG - chr2_4:50089451-50089470 None:intergenic 35.0%
TGTAGGCTTGGAAAACATTA+AGG - chr2_4:50089452-50089471 None:intergenic 35.0%
AATGTTACAAGTTCATCAGC+TGG - chr2_4:50089555-50089574 None:intergenic 35.0%
ACACTCATTCTTACCATGAA+GGG + chr2_4:50089612-50089631 Msa0332790:CDS 35.0%
!! GCAGAACACTGGTTAAATTT+TGG + chr2_4:50089650-50089669 Msa0332790:exon 35.0%
TGATCTCAAGTAGTGAAGTG+GGG - chr2_4:50084352-50084371 None:intergenic 40.0%
GTGATCTCAAGTAGTGAAGT+GGG - chr2_4:50084353-50084372 None:intergenic 40.0%
TGTGATCTCAAGTAGTGAAG+TGG - chr2_4:50084354-50084373 None:intergenic 40.0%
CGAAGAAGAAGATGATGACA+AGG - chr2_4:50084407-50084426 None:intergenic 40.0%
GAGAGAGTGAATTGCTACAA+TGG + chr2_4:50084862-50084881 Msa0332790:exon 40.0%
TGCTACAATGGCAAACAAGA+TGG + chr2_4:50084874-50084893 Msa0332790:exon 40.0%
CATCAATTGATGCACAGCTT+AGG + chr2_4:50084906-50084925 Msa0332790:CDS 40.0%
!! TCATCTTCACTCACTTTTGC+AGG - chr2_4:50084941-50084960 None:intergenic 40.0%
TTTACATGGAGAGGATCTGA+AGG + chr2_4:50085018-50085037 Msa0332790:CDS 40.0%
GAGAATCATTTCCCCTCTAA+AGG - chr2_4:50085286-50085305 None:intergenic 40.0%
CACTAAATCTACAGTCACCA+AGG - chr2_4:50085411-50085430 None:intergenic 40.0%
TGCTCTTTGACATGATGAGA+CGG + chr2_4:50085615-50085634 Msa0332790:intron 40.0%
TTCTTCACGGTGTGATTGAA+AGG + chr2_4:50085646-50085665 Msa0332790:intron 40.0%
AGGCTAAAATGCTGTTATGC+AGG + chr2_4:50085666-50085685 Msa0332790:intron 40.0%
! CCAAGCTCTTCAAGTTTCTT+AGG - chr2_4:50085739-50085758 None:intergenic 40.0%
CCTAAGAAACTTGAAGAGCT+TGG + chr2_4:50085736-50085755 Msa0332790:CDS 40.0%
TTGATCACAAGTTTCGATGC+AGG + chr2_4:50085763-50085782 Msa0332790:CDS 40.0%
AAGCATGTGTGAAAAGGACT+TGG - chr2_4:50085806-50085825 None:intergenic 40.0%
TTGAACCTCTTCAGCTAAGT+TGG - chr2_4:50085836-50085855 None:intergenic 40.0%
! CGAAGGAACAAGTTGAAGAA+AGG + chr2_4:50085868-50085887 Msa0332790:CDS 40.0%
AACCACTGAATCTGACATTG+AGG + chr2_4:50085915-50085934 Msa0332790:CDS 40.0%
TTCCTCAATGTCAGATTCAG+TGG - chr2_4:50085920-50085939 None:intergenic 40.0%
CATGAAGAAATCTCCTCAAG+AGG + chr2_4:50085963-50085982 Msa0332790:CDS 40.0%
CGATCTTTGCTTCAAAAGCA+CGG + chr2_4:50086054-50086073 Msa0332790:CDS 40.0%
! TTTGTTCTTTTCGCAGGGTA+AGG + chr2_4:50086153-50086172 Msa0332790:intron 40.0%
TCCTCTTGATTTCGTCAGTA+CGG - chr2_4:50086392-50086411 None:intergenic 40.0%
CACCCTTCCAAATTGTTTCA+TGG - chr2_4:50086461-50086480 None:intergenic 40.0%
CAACACGGCGAAGAAATTTA+GGG - chr2_4:50086485-50086504 None:intergenic 40.0%
TCAACACGGCGAAGAAATTT+AGG - chr2_4:50086486-50086505 None:intergenic 40.0%
! CAATTTTCTTCTTGGATGGG+TGG + chr2_4:50086564-50086583 Msa0332790:CDS 40.0%
! TCTTCCATGATGCAGAGTTT+TGG + chr2_4:50087099-50087118 Msa0332790:intron 40.0%
TTTCACAATAGCCATGAGCT+AGG - chr2_4:50087214-50087233 None:intergenic 40.0%
CTCATCTACATTGGTGAATG+TGG - chr2_4:50087249-50087268 None:intergenic 40.0%
CACATTCACCAATGTAGATG+AGG + chr2_4:50087247-50087266 Msa0332790:CDS 40.0%
GAAGCCTTCTTGATTTCTTG+AGG + chr2_4:50087473-50087492 Msa0332790:CDS 40.0%
CTTGCCTCAAGAAATCAAGA+AGG - chr2_4:50087480-50087499 None:intergenic 40.0%
! TTGAGGCAAGTTTCCACTTT+TGG + chr2_4:50087490-50087509 Msa0332790:CDS 40.0%
TACAAGTGACAGTCCAAAAG+TGG - chr2_4:50087506-50087525 None:intergenic 40.0%
!! CTTTTGGACTGTCACTTGTA+AGG + chr2_4:50087506-50087525 Msa0332790:CDS 40.0%
GGATGCCATTACCAAACATT+TGG + chr2_4:50087570-50087589 Msa0332790:CDS 40.0%
TTCTTCAGACCATTCTTGGT+AGG - chr2_4:50087605-50087624 None:intergenic 40.0%
!!! TGGCTTTTGTCTGAGTTGAT+TGG + chr2_4:50087637-50087656 Msa0332790:CDS 40.0%
!! TGTCTGAGTTGATTGGCAAA+AGG + chr2_4:50087644-50087663 Msa0332790:CDS 40.0%
!!! ATTGGCAAAAGGCCACTTTT+TGG + chr2_4:50087655-50087674 Msa0332790:CDS 40.0%
!! TAATTTCATCGGTTTGGGGT+AGG - chr2_4:50087687-50087706 None:intergenic 40.0%
ATGGAAGTTCTGCTATGACA+CGG - chr2_4:50087729-50087748 None:intergenic 40.0%
GAACTTCCATCTGACAACTT+TGG + chr2_4:50087739-50087758 Msa0332790:CDS 40.0%
AGTTGCCATCGAAATGATGT+AGG - chr2_4:50087767-50087786 None:intergenic 40.0%
TTCAACGTGAATGCAAAGTC+AGG + chr2_4:50087818-50087837 Msa0332790:CDS 40.0%
AACAACGGAACGACTCTTAA+TGG - chr2_4:50087847-50087866 None:intergenic 40.0%
CCGGTTAATGTACCAGTTTA+TGG - chr2_4:50087923-50087942 None:intergenic 40.0%
GGGAAGCAAGAAGTTATGAT+TGG + chr2_4:50087949-50087968 Msa0332790:CDS 40.0%
TCTGATTCAGGAAAAGATGC+TGG + chr2_4:50087976-50087995 Msa0332790:CDS 40.0%
ATTCAGGAAAAGATGCTGGA+AGG + chr2_4:50087980-50087999 Msa0332790:CDS 40.0%
ATTTCTGTGCGACTTTGATG+AGG - chr2_4:50088044-50088063 None:intergenic 40.0%
GTTAAGCTAACCATGTTCCA+CGG + chr2_4:50088069-50088088 Msa0332790:CDS 40.0%
TTGAGACAAGATGGCAAGAT+GGG - chr2_4:50088130-50088149 None:intergenic 40.0%
CAACCACCAGAAACAATTCA+CGG + chr2_4:50088147-50088166 Msa0332790:CDS 40.0%
AGAGATCCGTGAATTGTTTC+TGG - chr2_4:50088156-50088175 None:intergenic 40.0%
!!! ATTCTGGTTTTGGAGAGCTT+GGG - chr2_4:50088290-50088309 None:intergenic 40.0%
CGGAAATACTCAACAAAACG+TGG - chr2_4:50088381-50088400 None:intergenic 40.0%
GAGTATGGTAGGATGAACAT+TGG + chr2_4:50088623-50088642 Msa0332790:CDS 40.0%
CAAGGTTTCATCTTCCAGTA+TGG + chr2_4:50088726-50088745 Msa0332790:CDS 40.0%
TTTCATCTTCCAGTATGGCT+GGG + chr2_4:50088731-50088750 Msa0332790:CDS 40.0%
TGTACATCTCTTGCAGCATA+TGG - chr2_4:50088805-50088824 None:intergenic 40.0%
AGTTGAAATGGTGTTTGCCA+AGG + chr2_4:50088859-50088878 Msa0332790:CDS 40.0%
GTTGAAATGGTGTTTGCCAA+GGG + chr2_4:50088860-50088879 Msa0332790:CDS 40.0%
! GTATTGCAGCACTGAATGAT+AGG + chr2_4:50088891-50088910 Msa0332790:CDS 40.0%
TGATAGGCTCCTAGTTTCAA+AGG + chr2_4:50088907-50088926 Msa0332790:CDS 40.0%
TCCTAGTTTCAAAGGATCTG+TGG + chr2_4:50088915-50088934 Msa0332790:CDS 40.0%
CTTCTCAATTGTTCCCCAAA+TGG - chr2_4:50088941-50088960 None:intergenic 40.0%
! TTAACGGTCAAGGGCATATT+TGG + chr2_4:50089050-50089069 Msa0332790:intron 40.0%
GCCAGTAGATAAGTTCAGAT+AGG - chr2_4:50089081-50089100 None:intergenic 40.0%
TGAGTCTTTGCTTCAAGTAG+GGG - chr2_4:50089404-50089423 None:intergenic 40.0%
CTGAGTCTTTGCTTCAAGTA+GGG - chr2_4:50089405-50089424 None:intergenic 40.0%
TCTGAGTCTTTGCTTCAAGT+AGG - chr2_4:50089406-50089425 None:intergenic 40.0%
GGGTTGTAATGTACGAATCA+CGG - chr2_4:50089431-50089450 None:intergenic 40.0%
TCCAAGCCTACACATTGAAA+CGG + chr2_4:50089460-50089479 Msa0332790:CDS 40.0%
AGCAGACTCTTTCGATATTG+GGG - chr2_4:50089520-50089539 None:intergenic 40.0%
CAGCAGACTCTTTCGATATT+GGG - chr2_4:50089521-50089540 None:intergenic 40.0%
TCAGCAGACTCTTTCGATAT+TGG - chr2_4:50089522-50089541 None:intergenic 40.0%
AAGTGAATATGCTCCTGGTT+TGG + chr2_4:50089584-50089603 Msa0332790:CDS 40.0%
CACACTCATTCTTACCATGA+AGG + chr2_4:50089611-50089630 Msa0332790:CDS 40.0%
ATTTGTGTGGCAGCAAAGTA+AGG - chr2_4:50089836-50089855 None:intergenic 40.0%
TAACTGTCTGGCACACAACA+CGG + chr2_4:50084435-50084454 Msa0332790:five_prime_UTR 45.0%
TGATGCACAGCTTAGGCAAT+TGG + chr2_4:50084913-50084932 Msa0332790:CDS 45.0%
! TCTTCAACTTGTTCCTTCGG+CGG - chr2_4:50085867-50085886 None:intergenic 45.0%
TACTGCTCATCCTACTCAGT+CGG + chr2_4:50086026-50086045 Msa0332790:CDS 45.0%
! CTTTGCTTCAAAAGCACGGA+AGG + chr2_4:50086058-50086077 Msa0332790:CDS 45.0%
CATCACTCCTGATGATAAGC+AGG + chr2_4:50086205-50086224 Msa0332790:CDS 45.0%
TCAAGCTCCTGCTTATCATC+AGG - chr2_4:50086215-50086234 None:intergenic 45.0%
! TCCGTACTGACGAAATCAAG+AGG + chr2_4:50086388-50086407 Msa0332790:CDS 45.0%
ATTTCATCTTGGGGAGTTGG+TGG - chr2_4:50086417-50086436 None:intergenic 45.0%
CTCATTTCATCTTGGGGAGT+TGG - chr2_4:50086420-50086439 None:intergenic 45.0%
CCAGCTCTCATTTCATCTTG+GGG - chr2_4:50086426-50086445 None:intergenic 45.0%
CCCAGCTCTCATTTCATCTT+GGG - chr2_4:50086427-50086446 None:intergenic 45.0%
CCCAAGATGAAATGAGAGCT+GGG + chr2_4:50086424-50086443 Msa0332790:CDS 45.0%
TCCCAGCTCTCATTTCATCT+TGG - chr2_4:50086428-50086447 None:intergenic 45.0%
AGTGACTCCTGAAGTGACAA+GGG + chr2_4:50086702-50086721 Msa0332790:CDS 45.0%
! CAAACATCCCTTGTCACTTC+AGG - chr2_4:50086712-50086731 None:intergenic 45.0%
TCTCGTTATCTCCTAGCTCA+TGG + chr2_4:50087200-50087219 Msa0332790:CDS 45.0%
TTGGTGAATGTGGCTTCTTC+AGG - chr2_4:50087239-50087258 None:intergenic 45.0%
GATCTGTAGCAGAGTTCAAG+AGG - chr2_4:50087418-50087437 None:intergenic 45.0%
TACAGATCACTCTGTGCTTG+TGG + chr2_4:50087430-50087449 Msa0332790:CDS 45.0%
TAGGCTCCAAAGTTGTCAGA+TGG - chr2_4:50087748-50087767 None:intergenic 45.0%
TGGAGCCTACATCATTTCGA+TGG + chr2_4:50087759-50087778 Msa0332790:CDS 45.0%
CTCGGTTGTTCTCCATAAAC+TGG + chr2_4:50087908-50087927 Msa0332790:CDS 45.0%
TGGTACATTAACCGGATCGA+TGG + chr2_4:50087928-50087947 Msa0332790:CDS 45.0%
GGTACATTAACCGGATCGAT+GGG + chr2_4:50087929-50087948 Msa0332790:CDS 45.0%
TGCAGCATGGCAGCTATATA+AGG + chr2_4:50088008-50088027 Msa0332790:CDS 45.0%
ATGGCAGCTATATAAGGCTC+AGG + chr2_4:50088014-50088033 Msa0332790:CDS 45.0%
GTTGAGACAAGATGGCAAGA+TGG - chr2_4:50088131-50088150 None:intergenic 45.0%
TTCTGGTGGTTGAGACAAGA+TGG - chr2_4:50088139-50088158 None:intergenic 45.0%
!! GATCCGTGAATTGTTTCTGG+TGG - chr2_4:50088153-50088172 None:intergenic 45.0%
TCTCTTCGTGTGACAGTTCA+AGG + chr2_4:50088171-50088190 Msa0332790:CDS 45.0%
! TATTGAACAGTCGTTCGGTG+AGG + chr2_4:50088200-50088219 Msa0332790:CDS 45.0%
GTGAGGAACACTTGTGCTTT+AGG + chr2_4:50088217-50088236 Msa0332790:CDS 45.0%
!! ACTGCTGCTACTCTAGAACA+TGG + chr2_4:50088255-50088274 Msa0332790:CDS 45.0%
!!! TTCTGGTTTTGGAGAGCTTG+GGG - chr2_4:50088289-50088308 None:intergenic 45.0%
!!! CATTCTGGTTTTGGAGAGCT+TGG - chr2_4:50088291-50088310 None:intergenic 45.0%
CAAGCTCTCCAAAACCAGAA+TGG + chr2_4:50088289-50088308 Msa0332790:CDS 45.0%
ATCCTACCATACTCCATCTC+TGG - chr2_4:50088617-50088636 None:intergenic 45.0%
GATGAACATTGGAAGTCGAC+CGG + chr2_4:50088634-50088653 Msa0332790:CDS 45.0%
AGTGTTTCAATGCCTCCACT+AGG - chr2_4:50088671-50088690 None:intergenic 45.0%
ATGAAACCTTGTCTGTGTCC+AGG - chr2_4:50088717-50088736 None:intergenic 45.0%
GTTTCATCTTCCAGTATGGC+TGG + chr2_4:50088730-50088749 Msa0332790:CDS 45.0%
CATTCAGTGCTGCAATACCA+GGG - chr2_4:50088889-50088908 None:intergenic 45.0%
TCATTCAGTGCTGCAATACC+AGG - chr2_4:50088890-50088909 None:intergenic 45.0%
!! GCCACAGATCCTTTGAAACT+AGG - chr2_4:50088919-50088938 None:intergenic 45.0%
TCAAAGGATCTGTGGCCATT+TGG + chr2_4:50088923-50088942 Msa0332790:CDS 45.0%
CAAAGGATCTGTGGCCATTT+GGG + chr2_4:50088924-50088943 Msa0332790:CDS 45.0%
AAAGGATCTGTGGCCATTTG+GGG + chr2_4:50088925-50088944 Msa0332790:CDS 45.0%
GCACACAAGGAAGTTCTTGA+AGG + chr2_4:50089375-50089394 Msa0332790:CDS 45.0%
TCCGTTTCAATGTGTAGGCT+TGG - chr2_4:50089464-50089483 None:intergenic 45.0%
CAGACTCTTTCGATATTGGG+GGG - chr2_4:50089518-50089537 None:intergenic 45.0%
GCAGACTCTTTCGATATTGG+GGG - chr2_4:50089519-50089538 None:intergenic 45.0%
! CCAGGAGCATATTCACTTGT+TGG - chr2_4:50089582-50089601 None:intergenic 45.0%
CCAACAAGTGAATATGCTCC+TGG + chr2_4:50089579-50089598 Msa0332790:CDS 45.0%
ATGAGTGTGTCTTCCAAACC+AGG - chr2_4:50089600-50089619 None:intergenic 45.0%
!! ATAAAAAAAAAAAAAAACAT+AGG - chr2_4:50084504-50084523 None:intergenic 5.0%
CTTGGCCAACTTAGCTGAAG+AGG + chr2_4:50085828-50085847 Msa0332790:CDS 50.0%
AGCTTGATGAAGCTCTCCAG+AGG + chr2_4:50086228-50086247 Msa0332790:CDS 50.0%
GCTTGATGAAGCTCTCCAGA+GGG + chr2_4:50086229-50086248 Msa0332790:CDS 50.0%
CCCCAAGATGAAATGAGAGC+TGG + chr2_4:50086423-50086442 Msa0332790:CDS 50.0%
GGAGTCACTCTTGGATTACC+TGG - chr2_4:50086691-50086710 None:intergenic 50.0%
GTCACTTCAGGAGTCACTCT+TGG - chr2_4:50086700-50086719 None:intergenic 50.0%
GAGTGACTCCTGAAGTGACA+AGG + chr2_4:50086701-50086720 Msa0332790:CDS 50.0%
TTCGCGCAGAAGAACTTCAC+AGG + chr2_4:50086930-50086949 Msa0332790:CDS 50.0%
ACACGGTACGGTTCGTTCAA+AGG - chr2_4:50087134-50087153 None:intergenic 50.0%
GAACCGTACCGTGTTGTACT+CGG + chr2_4:50087140-50087159 Msa0332790:CDS 50.0%
AACCGTACCGTGTTGTACTC+GGG + chr2_4:50087141-50087160 Msa0332790:CDS 50.0%
GGTGATCGTGCAATTGCTGA+TGG + chr2_4:50087451-50087470 Msa0332790:CDS 50.0%
TGATCGTCACACTGACGTGA+TGG + chr2_4:50087549-50087568 Msa0332790:CDS 50.0%
GGTAGGTCAGGTCCAAAAAG+TGG - chr2_4:50087670-50087689 None:intergenic 50.0%
TCAACTGCCAGCACATCAGA+CGG - chr2_4:50087793-50087812 None:intergenic 50.0%
CTTCTTGCTTCCCATCGATC+CGG - chr2_4:50087942-50087961 None:intergenic 50.0%
! CTGGAAGGTTTTCTGCAGCA+TGG + chr2_4:50087995-50088014 Msa0332790:CDS 50.0%
GCAGCTATATAAGGCTCAGG+AGG + chr2_4:50088017-50088036 Msa0332790:CDS 50.0%
GACAAGATGGCAAGATGGGT+AGG - chr2_4:50088126-50088145 None:intergenic 50.0%
!!! TCTGGTTTTGGAGAGCTTGG+GGG - chr2_4:50088288-50088307 None:intergenic 50.0%
GACAGCCATCTGATCCATCA+AGG - chr2_4:50088319-50088338 None:intergenic 50.0%
GATGGCTGTCATTGCAACTG+AGG + chr2_4:50088329-50088348 Msa0332790:CDS 50.0%
CATGTAGGCTACACCAGAGA+TGG + chr2_4:50088601-50088620 Msa0332790:intron 50.0%
GCTACACCAGAGATGGAGTA+TGG + chr2_4:50088608-50088627 Msa0332790:CDS 50.0%
CACCAGAGATGGAGTATGGT+AGG + chr2_4:50088612-50088631 Msa0332790:CDS 50.0%
AAACACTGCGTGCGATACCA+TGG + chr2_4:50088684-50088703 Msa0332790:CDS 50.0%
CGATACCATGGATCTTTGCC+TGG + chr2_4:50088696-50088715 Msa0332790:CDS 50.0%
TGTGTCCAGGCAAAGATCCA+TGG - chr2_4:50088704-50088723 None:intergenic 50.0%
TCTTTGCCTGGACACAGACA+AGG + chr2_4:50088708-50088727 Msa0332790:CDS 50.0%
GCGGATCCGTTTCAATGTGT+AGG - chr2_4:50089469-50089488 None:intergenic 50.0%
GATCCGCGATCCAAACTACA+AGG + chr2_4:50089482-50089501 Msa0332790:CDS 50.0%
CCACCTTGTAGTTTGGATCG+CGG - chr2_4:50089488-50089507 None:intergenic 50.0%
CGATCCAAACTACAAGGTGG+AGG + chr2_4:50089488-50089507 Msa0332790:CDS 50.0%
!! ACCATGAAGGGTATTGCTGC+TGG + chr2_4:50089624-50089643 Msa0332790:CDS 50.0%
TTCAAATTGCGCACCGCCGA+AGG + chr2_4:50085851-50085870 Msa0332790:CDS 55.0%
GATCGACGAACCGACTGAGT+AGG - chr2_4:50086039-50086058 None:intergenic 55.0%
TGATGAAGCTCTCCAGAGGG+AGG + chr2_4:50086232-50086251 Msa0332790:CDS 55.0%
TGGATGGGTGGTGATCGTGA+CGG + chr2_4:50086576-50086595 Msa0332790:CDS 55.0%
ACCGTACCGTGTTGTACTCG+GGG + chr2_4:50087142-50087161 Msa0332790:CDS 55.0%
TCCCCGAGTACAACACGGTA+CGG - chr2_4:50087146-50087165 None:intergenic 55.0%
TCACCTCCCCGAGTACAACA+CGG - chr2_4:50087151-50087170 None:intergenic 55.0%
TGTTGTACTCGGGGAGGTGA+GGG + chr2_4:50087151-50087170 Msa0332790:CDS 55.0%
!! TCATCGGTTTGGGGTAGGTC+AGG - chr2_4:50087682-50087701 None:intergenic 55.0%
AACTGCACCGTCTGATGTGC+TGG + chr2_4:50087783-50087802 Msa0332790:CDS 55.0%
TGAGTCTGCTCCTGCTGCAT+TGG + chr2_4:50087885-50087904 Msa0332790:CDS 55.0%
AACAACCGAGCCAATGCAGC+AGG - chr2_4:50087898-50087917 None:intergenic 55.0%
CTAACCATGTTCCACGGTCG+CGG + chr2_4:50088075-50088094 Msa0332790:CDS 55.0%
GGTGGAACTGTTGGAAGAGG+AGG + chr2_4:50088096-50088115 Msa0332790:CDS 55.0%
GGAACTGTTGGAAGAGGAGG+TGG + chr2_4:50088099-50088118 Msa0332790:CDS 55.0%
!!! AAGGCGCGCCATTCTGGTTT+TGG - chr2_4:50088300-50088319 None:intergenic 55.0%
GAAGTCGACCGGCAAAGAGA+AGG + chr2_4:50088645-50088664 Msa0332790:CDS 55.0%
CCACTAGGCCTTCTCTTTGC+CGG - chr2_4:50088656-50088675 None:intergenic 55.0%
GCAAAGAGAAGGCCTAGTGG+AGG + chr2_4:50088656-50088675 Msa0332790:CDS 55.0%
CTTCCAGTATGGCTGGGCTT+TGG + chr2_4:50088737-50088756 Msa0332790:CDS 55.0%
TGCAATACCAGGGTCTCCCT+TGG - chr2_4:50088879-50088898 None:intergenic 55.0%
TCTGTAGGTGGCTGCACACA+AGG + chr2_4:50089362-50089381 Msa0332790:intron 55.0%
CCGCGATCCAAACTACAAGG+TGG + chr2_4:50089485-50089504 Msa0332790:CDS 55.0%
CGCACCTCCACCTTGTAGTT+TGG - chr2_4:50089495-50089514 None:intergenic 55.0%
GCCAGCAGCAATACCCTTCA+TGG - chr2_4:50089628-50089647 None:intergenic 55.0%
CTTCGATGCTCACCTCCCTC+TGG - chr2_4:50086247-50086266 None:intergenic 60.0%
GTACCGTGTTGTACTCGGGG+AGG + chr2_4:50087145-50087164 Msa0332790:CDS 60.0%
GTGTTGTACTCGGGGAGGTG+AGG + chr2_4:50087150-50087169 Msa0332790:CDS 60.0%
!! CTGCTCCTGCTGCATTGGCT+CGG + chr2_4:50087890-50087909 Msa0332790:CDS 60.0%
CGCGGTGGAACTGTTGGAAG+AGG + chr2_4:50088093-50088112 Msa0332790:CDS 60.0%
ACCAGAATGGCGCGCCTTGA+TGG + chr2_4:50088302-50088321 Msa0332790:CDS 60.0%
TCCATCAAGGCGCGCCATTC+TGG - chr2_4:50088306-50088325 None:intergenic 60.0%
! GCGCGCCTTGATGGATCAGA+TGG + chr2_4:50088311-50088330 Msa0332790:CDS 60.0%
CCGGCAAAGAGAAGGCCTAG+TGG + chr2_4:50088653-50088672 Msa0332790:CDS 60.0%
GCTCCAAAGCCCAGCCATAC+TGG - chr2_4:50088743-50088762 None:intergenic 60.0%
GTGTTTGCCAAGGGAGACCC+TGG + chr2_4:50088869-50088888 Msa0332790:CDS 60.0%
GCTGCTGGCATGCAGAACAC+TGG + chr2_4:50089639-50089658 Msa0332790:CDS 60.0%
ACCATGTTCCACGGTCGCGG+TGG + chr2_4:50088078-50088097 Msa0332790:CDS 65.0%
TCCACCGCGACCGTGGAACA+TGG - chr2_4:50088082-50088101 None:intergenic 65.0%
CAACAGTTCCACCGCGACCG+TGG - chr2_4:50088089-50088108 None:intergenic 65.0%
CACGGTCGCGGTGGAACTGT+TGG + chr2_4:50088087-50088106 Msa0332790:CDS 65.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 50084232 50089889 50084232 ID=Msa0332790;Name=Msa0332790
chr2_4 mRNA 50084232 50089889 50084232 ID=Msa0332790-mRNA-1;Parent=Msa0332790;Name=Msa0332790-mRNA-1;_AED=0.05;_eAED=0.05;_QI=246|1|1|1|0.9|0.81|11|224|966
chr2_4 exon 50084232 50084456 50084232 ID=Msa0332790-mRNA-1:exon:14953;Parent=Msa0332790-mRNA-1
chr2_4 exon 50084860 50085045 50084860 ID=Msa0332790-mRNA-1:exon:14954;Parent=Msa0332790-mRNA-1
chr2_4 exon 50085688 50086079 50085688 ID=Msa0332790-mRNA-1:exon:14955;Parent=Msa0332790-mRNA-1
chr2_4 exon 50086169 50086253 50086169 ID=Msa0332790-mRNA-1:exon:14956;Parent=Msa0332790-mRNA-1
chr2_4 exon 50086375 50086597 50086375 ID=Msa0332790-mRNA-1:exon:14957;Parent=Msa0332790-mRNA-1
chr2_4 exon 50086692 50086795 50086692 ID=Msa0332790-mRNA-1:exon:14958;Parent=Msa0332790-mRNA-1
chr2_4 exon 50086896 50086989 50086896 ID=Msa0332790-mRNA-1:exon:14959;Parent=Msa0332790-mRNA-1
chr2_4 exon 50087114 50087268 50087114 ID=Msa0332790-mRNA-1:exon:14960;Parent=Msa0332790-mRNA-1
chr2_4 exon 50087406 50088404 50087406 ID=Msa0332790-mRNA-1:exon:14961;Parent=Msa0332790-mRNA-1
chr2_4 exon 50088608 50088994 50088608 ID=Msa0332790-mRNA-1:exon:14962;Parent=Msa0332790-mRNA-1
chr2_4 exon 50089369 50089889 50089369 ID=Msa0332790-mRNA-1:exon:14963;Parent=Msa0332790-mRNA-1
chr2_4 five_prime_UTR 50084232 50084456 50084232 ID=Msa0332790-mRNA-1:five_prime_utr;Parent=Msa0332790-mRNA-1
chr2_4 five_prime_UTR 50084860 50084880 50084860 ID=Msa0332790-mRNA-1:five_prime_utr;Parent=Msa0332790-mRNA-1
chr2_4 CDS 50084881 50085045 50084881 ID=Msa0332790-mRNA-1:cds;Parent=Msa0332790-mRNA-1
chr2_4 CDS 50085688 50086079 50085688 ID=Msa0332790-mRNA-1:cds;Parent=Msa0332790-mRNA-1
chr2_4 CDS 50086169 50086253 50086169 ID=Msa0332790-mRNA-1:cds;Parent=Msa0332790-mRNA-1
chr2_4 CDS 50086375 50086597 50086375 ID=Msa0332790-mRNA-1:cds;Parent=Msa0332790-mRNA-1
chr2_4 CDS 50086692 50086795 50086692 ID=Msa0332790-mRNA-1:cds;Parent=Msa0332790-mRNA-1
chr2_4 CDS 50086896 50086989 50086896 ID=Msa0332790-mRNA-1:cds;Parent=Msa0332790-mRNA-1
chr2_4 CDS 50087114 50087268 50087114 ID=Msa0332790-mRNA-1:cds;Parent=Msa0332790-mRNA-1
chr2_4 CDS 50087406 50088404 50087406 ID=Msa0332790-mRNA-1:cds;Parent=Msa0332790-mRNA-1
chr2_4 CDS 50088608 50088994 50088608 ID=Msa0332790-mRNA-1:cds;Parent=Msa0332790-mRNA-1
chr2_4 CDS 50089369 50089665 50089369 ID=Msa0332790-mRNA-1:cds;Parent=Msa0332790-mRNA-1
chr2_4 three_prime_UTR 50089666 50089889 50089666 ID=Msa0332790-mRNA-1:three_prime_utr;Parent=Msa0332790-mRNA-1
Gene Sequence

>Msa0332790

ATGGCAAACAAGATGGAAAAAATGGCATCAATTGATGCACAGCTTAGGCAATTGGTTCCTGCAAAAGTGAGTGAAGATGATAAACTTATTGAGTATGATGCTTTGTTGTTGGATCGGTTTCTTGATATTCTTCAAGATTTACATGGAGAGGATCTGAAGGATTCTGTTCAAGAAGTGTATGAACTGTCTGCTGAATATGAAAGAAAGCATGATCCTAAGAAACTTGAAGAGCTTGGAAATTTGATCACAAGTTTCGATGCAGGTGACTCAATTGTTGTTGCCAAGTCCTTTTCACACATGCTTAACTTGGCCAACTTAGCTGAAGAGGTTCAAATTGCGCACCGCCGAAGGAACAAGTTGAAGAAAGGTGATTTTAGGGATGAGAGCAATGCAACCACTGAATCTGACATTGAGGAAACTCTCAAGAAACTTGTGTTTGACATGAAGAAATCTCCTCAAGAGGTTTTTGATGCATTGAAGAACCAGACTGTTGATCTTGTTCTTACTGCTCATCCTACTCAGTCGGTTCGTCGATCTTTGCTTCAAAAGCACGGAAGGGTAAGGAACTGTTTATCTCAATTGTATGCTAAAGACATCACTCCTGATGATAAGCAGGAGCTTGATGAAGCTCTCCAGAGGGAGATTCAAGCTGCATTCCGTACTGACGAAATCAAGAGGACTCCACCAACTCCCCAAGATGAAATGAGAGCTGGGATGAGTTACTTCCATGAAACAATTTGGAAGGGTGTCCCTAAATTTCTTCGCCGTGTTGATACAGCATTGAAGAACATAGGGATTAACGAACGTGTTCCCTATAATGCTCCTCTTATTCAATTTTCTTCTTGGATGGGTGGTGATCGTGACGGTAATCCAAGAGTGACTCCTGAAGTGACAAGGGATGTTTGCTTACTAGCTAGAATGATGGCTGCTAACTTGTATTATTCACAGATAGAAGATCTTATGTTTGAACTTTCTATGTGGCGTTGCAATGATGAGCTACGTGTTCGCGCAGAAGAACTTCACAGGAATTCCAAGAAAGATGAAGTTGCAAAACACTATATAGAGTTTTGGAAAAAAATTCCTTTGAACGAACCGTACCGTGTTGTACTCGGGGAGGTGAGGGACAAGCTCTATCGCACTCGTGAGCGTTCTCGTTATCTCCTAGCTCATGGCTATTGTGAAATTCCTGAAGAAGCCACATTCACCAATGTAGATGAGTTTCTGGAACCTCTTGAACTCTGCTACAGATCACTCTGTGCTTGTGGTGATCGTGCAATTGCTGATGGAAGCCTTCTTGATTTCTTGAGGCAAGTTTCCACTTTTGGACTGTCACTTGTAAGGCTTGATATAAGGCAAGAGTCTGATCGTCACACTGACGTGATGGATGCCATTACCAAACATTTGGAAATTGGATCCTACCAAGAATGGTCTGAAGAAAAAAGACAGGAATGGCTTTTGTCTGAGTTGATTGGCAAAAGGCCACTTTTTGGACCTGACCTACCCCAAACCGATGAAATTAGAGATGTTTTAGACACGTTCCGTGTCATAGCAGAACTTCCATCTGACAACTTTGGAGCCTACATCATTTCGATGGCAACTGCACCGTCTGATGTGCTGGCAGTTGAACTTCTTCAACGTGAATGCAAAGTCAGGAATCCATTAAGAGTCGTTCCGTTGTTTGAGAAGCTTGATGATCTTGAGTCTGCTCCTGCTGCATTGGCTCGGTTGTTCTCCATAAACTGGTACATTAACCGGATCGATGGGAAGCAAGAAGTTATGATTGGATATTCTGATTCAGGAAAAGATGCTGGAAGGTTTTCTGCAGCATGGCAGCTATATAAGGCTCAGGAGGACCTCATCAAAGTCGCACAGAAATTTGGTGTTAAGCTAACCATGTTCCACGGTCGCGGTGGAACTGTTGGAAGAGGAGGTGGACCTACCCATCTTGCCATCTTGTCTCAACCACCAGAAACAATTCACGGATCTCTTCGTGTGACAGTTCAAGGTGAAGTTATTGAACAGTCGTTCGGTGAGGAACACTTGTGCTTTAGGACACTGCAACGTTTCACTGCTGCTACTCTAGAACATGGAATGCGTCCCCCAAGCTCTCCAAAACCAGAATGGCGCGCCTTGATGGATCAGATGGCTGTCATTGCAACTGAGGAATACCGTTCAATTGTGTTCAAGGAACCACGTTTTGTTGAGTATTTCCGTCTGGCTACACCAGAGATGGAGTATGGTAGGATGAACATTGGAAGTCGACCGGCAAAGAGAAGGCCTAGTGGAGGCATTGAAACACTGCGTGCGATACCATGGATCTTTGCCTGGACACAGACAAGGTTTCATCTTCCAGTATGGCTGGGCTTTGGAGCAGCATTTAGACAAGTTGTTCAGAAGGATGTTAAGAATCTCCATATGCTGCAAGAGATGTACAATCAATGGCCTTTCTTTAGGGTTACCATTGATTTAGTTGAAATGGTGTTTGCCAAGGGAGACCCTGGTATTGCAGCACTGAATGATAGGCTCCTAGTTTCAAAGGATCTGTGGCCATTTGGGGAACAATTGAGAAGCAAATATGAAGAAACTAAGAAACTCCTACTTCAGGTGGCTGCACACAAGGAAGTTCTTGAAGGTGACCCCTACTTGAAGCAAAGACTCAGACTCCGTGATTCGTACATTACAACCCTTAATGTTTTCCAAGCCTACACATTGAAACGGATCCGCGATCCAAACTACAAGGTGGAGGTGCGCCCCCCAATATCGAAAGAGTCTGCTGAAACAAGTAAACCAGCTGATGAACTTGTAACATTGAATCCAACAAGTGAATATGCTCCTGGTTTGGAAGACACACTCATTCTTACCATGAAGGGTATTGCTGCTGGCATGCAGAACACTGGTTAA
Protein sequence

>Msa0332790

MANKMEKMASIDAQLRQLVPAKVSEDDKLIEYDALLLDRFLDILQDLHGEDLKDSVQEVYELSAEYERKHDPKKLEELGNLITSFDAGDSIVVAKSFSHMLNLANLAEEVQIAHRRRNKLKKGDFRDESNATTESDIEETLKKLVFDMKKSPQEVFDALKNQTVDLVLTAHPTQSVRRSLLQKHGRVRNCLSQLYAKDITPDDKQELDEALQREIQAAFRTDEIKRTPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYYSQIEDLMFELSMWRCNDELRVRAEELHRNSKKDEVAKHYIEFWKKIPLNEPYRVVLGEVRDKLYRTRERSRYLLAHGYCEIPEEATFTNVDEFLEPLELCYRSLCACGDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVMDAITKHLEIGSYQEWSEEKRQEWLLSELIGKRPLFGPDLPQTDEIRDVLDTFRVIAELPSDNFGAYIISMATAPSDVLAVELLQRECKVRNPLRVVPLFEKLDDLESAPAALARLFSINWYINRIDGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEDLIKVAQKFGVKLTMFHGRGGTVGRGGGPTHLAILSQPPETIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMRPPSSPKPEWRALMDQMAVIATEEYRSIVFKEPRFVEYFRLATPEMEYGRMNIGSRPAKRRPSGGIETLRAIPWIFAWTQTRFHLPVWLGFGAAFRQVVQKDVKNLHMLQEMYNQWPFFRVTIDLVEMVFAKGDPGIAALNDRLLVSKDLWPFGEQLRSKYEETKKLLLQVAAHKEVLEGDPYLKQRLRLRDSYITTLNVFQAYTLKRIRDPNYKVEVRPPISKESAETSKPADELVTLNPTSEYAPGLEDTLILTMKGIAAGMQNTG*