Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0333820 | XP_013465511.1 | 99.704 | 675 | 2 | 0 | 1 | 675 | 1 | 675 | 0.0 | 1396 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0333820 | sp|P36444|MAOC_FLAPR | 78.664 | 614 | 125 | 2 | 68 | 675 | 34 | 647 | 0.0 | 1021 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006070 | Msa0333820 | -0.816388 | 5.673595e-52 | -8.615850e-47 |
| Msa0091210 | Msa0333820 | 0.810362 | 1.196841e-50 | -8.615850e-47 |
| Msa0224810 | Msa0333820 | -0.818915 | 1.527654e-52 | -8.615850e-47 |
| Msa0248330 | Msa0333820 | 0.889629 | 2.041614e-73 | -8.615850e-47 |
| Msa0303890 | Msa0333820 | 0.935384 | 9.238220e-97 | -8.615850e-47 |
| Msa0333820 | Msa0580420 | -0.807929 | 3.975645e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0333820 | MtrunA17_Chr2g0331051 | 100.000 | 641 | 0 | 0 | 35 | 675 | 1 | 641 | 0.0 | 1332 |
| Msa0333820 | MtrunA17_Chr8g0340671 | 83.553 | 608 | 72 | 1 | 96 | 675 | 9 | 616 | 0.0 | 1041 |
| Msa0333820 | MtrunA17_Chr3g0140501 | 81.690 | 568 | 104 | 0 | 108 | 675 | 11 | 578 | 0.0 | 973 |
| Msa0333820 | MtrunA17_Chr8g0389961 | 78.342 | 591 | 128 | 0 | 85 | 675 | 1 | 591 | 0.0 | 967 |
| Msa0333820 | MtrunA17_Chr8g0337031 | 41.725 | 568 | 283 | 11 | 123 | 649 | 28 | 588 | 1.32e-143 | 432 |
| Msa0333820 | MtrunA17_Chr8g0349861 | 40.388 | 567 | 305 | 9 | 136 | 671 | 33 | 597 | 1.55e-141 | 426 |
| Msa0333820 | MtrunA17_Chr7g0247001 | 40.388 | 567 | 305 | 8 | 136 | 671 | 30 | 594 | 1.66e-141 | 426 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0333820 | AT1G79750.1 | 80.532 | 601 | 116 | 1 | 75 | 675 | 47 | 646 | 0.0 | 1007 |
| Msa0333820 | AT5G25880.1 | 79.401 | 568 | 117 | 0 | 108 | 675 | 21 | 588 | 0.0 | 964 |
| Msa0333820 | AT5G11670.1 | 79.066 | 578 | 120 | 1 | 99 | 675 | 11 | 588 | 0.0 | 946 |
| Msa0333820 | AT2G19900.1 | 78.483 | 567 | 122 | 0 | 109 | 675 | 15 | 581 | 0.0 | 933 |
| Msa0333820 | AT5G25880.2 | 79.815 | 540 | 109 | 0 | 108 | 647 | 21 | 560 | 0.0 | 917 |
| Msa0333820 | AT2G19900.2 | 80.498 | 482 | 94 | 0 | 194 | 675 | 1 | 482 | 0.0 | 805 |
| Msa0333820 | AT5G25880.3 | 79.819 | 441 | 89 | 0 | 108 | 548 | 21 | 461 | 0.0 | 758 |
| Msa0333820 | AT2G13560.1 | 42.133 | 572 | 293 | 10 | 136 | 671 | 46 | 615 | 6.77e-147 | 441 |
| Msa0333820 | AT4G00570.1 | 41.062 | 565 | 301 | 9 | 136 | 671 | 39 | 600 | 4.46e-143 | 431 |
Find 209 sgRNAs with CRISPR-Local
Find 371 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATATTCAACCGGCGAAAA+TGG | 0.198852 | 2_4:-51866730 | None:intergenic |
| ATTAAGCCAACAGTGCTTAT+TGG | 0.199640 | 2_4:+51866354 | Msa0333820:CDS |
| GGTGGGTTTGTAAGGAAATT+AGG | 0.233834 | 2_4:+51867603 | Msa0333820:three_prime_UTR |
| ACGAAGTGCGCAAGAATATT+TGG | 0.247961 | 2_4:+51866123 | Msa0333820:CDS |
| GTATATGTTTGAATTGAAAA+TGG | 0.253491 | 2_4:+51867765 | Msa0333820:three_prime_UTR |
| GGCGGTCCTCGCGATGTTTA+TGG | 0.265257 | 2_4:+51863635 | Msa0333820:CDS |
| CTCAATGATGAATTATATAT+CGG | 0.286816 | 2_4:+51865335 | Msa0333820:CDS |
| TTCAAGAAGTACTGAGAAAT+TGG | 0.292051 | 2_4:+51864893 | Msa0333820:CDS |
| ACCTTTGAAAGAAATTAAAA+AGG | 0.309592 | 2_4:+51863571 | Msa0333820:CDS |
| ACTAGTTGCAGCTTTGAAAT+TGG | 0.312159 | 2_4:+51865762 | Msa0333820:CDS |
| ACAGCATCGGTTGTTCTTGC+TGG | 0.313332 | 2_4:+51865739 | Msa0333820:CDS |
| CACCGGTAGCTTCTGTAGGC+TGG | 0.319833 | 2_4:-51867496 | None:intergenic |
| CCTTCCACAGCCGAAAGATT+TGG | 0.330794 | 2_4:+51867444 | Msa0333820:CDS |
| TTTACAAGTCATAATTGTAT+TGG | 0.330980 | 2_4:+51867581 | Msa0333820:three_prime_UTR |
| TTACAAGTCATAATTGTATT+GGG | 0.337018 | 2_4:+51867582 | Msa0333820:three_prime_UTR |
| GGAAGAAGTTGAGGGTAGTT+TGG | 0.339854 | 2_4:+51862692 | Msa0333820:five_prime_UTR |
| ATATTCCCTGGTTTCGGCCT+AGG | 0.341563 | 2_4:+51866875 | Msa0333820:CDS |
| GAGCAGGGTTGCTCAGGATT+AGG | 0.343833 | 2_4:+51863437 | Msa0333820:intron |
| CGCAACCAGATGCACCTTCC+TGG | 0.347752 | 2_4:+51863080 | Msa0333820:CDS |
| TTGTATTGGGTGGGTTTGTA+AGG | 0.348589 | 2_4:+51867595 | Msa0333820:three_prime_UTR |
| CATGGCAATGATGGATCTTC+AGG | 0.348590 | 2_4:+51864366 | Msa0333820:CDS |
| TTCGAAAGAGAAAGAATAAT+AGG | 0.351219 | 2_4:-51866543 | None:intergenic |
| GGCCTAGGTTTAATAATGTC+TGG | 0.353628 | 2_4:+51866890 | Msa0333820:CDS |
| GAGAACGGATCTTGGGTCTT+GGG | 0.354537 | 2_4:+51864953 | Msa0333820:CDS |
| CTGCCATTTCTATCATTGAT+TGG | 0.363401 | 2_4:-51863527 | None:intergenic |
| CATCGCCTCAACCACCTCTT+TGG | 0.369878 | 2_4:-51866403 | None:intergenic |
| ATCTTGGGTCTTGGGGATCT+AGG | 0.377783 | 2_4:+51864961 | Msa0333820:CDS |
| GCATACATATTCCCTGGTTT+CGG | 0.381227 | 2_4:+51866869 | Msa0333820:CDS |
| AACTGACGGAGAACGGATCT+TGG | 0.382641 | 2_4:+51864945 | Msa0333820:CDS |
| CTAAAGCAAAGACGAGCAAC+TGG | 0.382953 | 2_4:+51865359 | Msa0333820:CDS |
| CGATGTTTATGGCGAGGATA+AGG | 0.386932 | 2_4:+51863646 | Msa0333820:CDS |
| TGCACTTGAAACATCTAAAC+AGG | 0.390476 | 2_4:+51865993 | Msa0333820:CDS |
| TTGCAGCTTTGAAATTGGTT+GGG | 0.391250 | 2_4:+51865767 | Msa0333820:CDS |
| GACCACAAATTCTTATTCCT+TGG | 0.393449 | 2_4:+51865802 | Msa0333820:CDS |
| TGGTGGTTGCAGGCGGGCAC+TGG | 0.394769 | 2_4:+51865955 | Msa0333820:intron |
| TTTCTTGAGGAATAGTTGTT+GGG | 0.398481 | 2_4:-51864285 | None:intergenic |
| AATGTTGGAGTGATTCTTTA+CGG | 0.399579 | 2_4:-51866178 | None:intergenic |
| TCTGCAGCGGAACTTGATAT+TGG | 0.406075 | 2_4:-51864339 | None:intergenic |
| GCAAACTTCACCAAATCTTT+CGG | 0.406965 | 2_4:-51867454 | None:intergenic |
| GTTTCTTGAGGAATAGTTGT+TGG | 0.410920 | 2_4:-51864286 | None:intergenic |
| ACGGTATTCAAATTTAGAAA+TGG | 0.412514 | 2_4:+51867702 | Msa0333820:three_prime_UTR |
| TTTGTGAGGTCACCTTAAAA+AGG | 0.413924 | 2_4:-51862779 | None:intergenic |
| TCTTGCGCACTTCGTCCAAT+GGG | 0.414035 | 2_4:-51866115 | None:intergenic |
| ATGTTGGAGTGATTCTTTAC+GGG | 0.416918 | 2_4:-51866177 | None:intergenic |
| GTCCCAACATCAATAGTAAT+AGG | 0.416974 | 2_4:-51865296 | None:intergenic |
| AGCTTCTTCAGCGGTACATT+CGG | 0.417313 | 2_4:-51866580 | None:intergenic |
| GGTGGACAGAGAAGGGGTTA+TGG | 0.419901 | 2_4:+51863479 | Msa0333820:CDS |
| GGAGAACGGATCTTGGGTCT+TGG | 0.422394 | 2_4:+51864952 | Msa0333820:CDS |
| ACTTTCCCCTTATATTCAAC+CGG | 0.431090 | 2_4:-51866739 | None:intergenic |
| GGCGAGGCTTGCCAGAAATA+CGG | 0.435554 | 2_4:+51864681 | Msa0333820:CDS |
| TCACCAATCAATGATAGAAA+TGG | 0.438037 | 2_4:+51863524 | Msa0333820:CDS |
| TAGTGGTAGTTGGACTACTA+AGG | 0.438046 | 2_4:+51867632 | Msa0333820:three_prime_UTR |
| ACCGGTAGCTTCTGTAGGCT+GGG | 0.438513 | 2_4:-51867495 | None:intergenic |
| TATTACGAGCAGGGTTGCTC+AGG | 0.442722 | 2_4:+51863431 | Msa0333820:intron |
| CTGCCTATTACTATTGATGT+TGG | 0.446320 | 2_4:+51865293 | Msa0333820:CDS |
| GATTACCAGGAAGGTGCATC+TGG | 0.447748 | 2_4:-51863085 | None:intergenic |
| TACATTCGGACTGTGATGTT+GGG | 0.447948 | 2_4:-51866566 | None:intergenic |
| TTCTTGCGCACTTCGTCCAA+TGG | 0.448381 | 2_4:-51866116 | None:intergenic |
| ATGACTTGAATGTTCTTCTC+AGG | 0.450733 | 2_4:-51864916 | None:intergenic |
| GAAAGTGTTTGTGCCTGGCC+AGG | 0.451079 | 2_4:+51866756 | Msa0333820:CDS |
| TCTTGGGGATCTAGGTTGTC+AGG | 0.451273 | 2_4:+51864969 | Msa0333820:CDS |
| ACTGACGGAGAACGGATCTT+GGG | 0.451817 | 2_4:+51864946 | Msa0333820:CDS |
| ATAAGCTTTAGCAGCAACTT+TGG | 0.454475 | 2_4:-51867147 | None:intergenic |
| GCGAGGCTTGCCAGAAATAC+GGG | 0.458405 | 2_4:+51864682 | Msa0333820:CDS |
| TTCTCAGGGGATGGGAATAC+CGG | 0.461682 | 2_4:+51865090 | Msa0333820:intron |
| TAGGAAGGTGTAGTGGTAGT+TGG | 0.462789 | 2_4:+51867622 | Msa0333820:three_prime_UTR |
| TATATTCAACCGGCGAAAAT+GGG | 0.463892 | 2_4:-51866729 | None:intergenic |
| AAAATATAGATCAACACATC+TGG | 0.469282 | 2_4:+51865597 | Msa0333820:CDS |
| AGGATCACTTTGTGACTCCT+TGG | 0.470415 | 2_4:+51863675 | Msa0333820:CDS |
| CCCACGGCTTCTTGAAATGT+TGG | 0.470716 | 2_4:-51866193 | None:intergenic |
| TGCCTATTACTATTGATGTT+GGG | 0.470896 | 2_4:+51865294 | Msa0333820:CDS |
| TGGGAAATGGTGTTCAATCC+TGG | 0.472484 | 2_4:+51862727 | Msa0333820:CDS |
| GTTGCAGCTTTGAAATTGGT+TGG | 0.474733 | 2_4:+51865766 | Msa0333820:CDS |
| CTTGGAGTGTTTCTGTTGCT+AGG | 0.475788 | 2_4:+51863693 | Msa0333820:CDS |
| CTTGATATTGGCGTATGTGC+TGG | 0.477673 | 2_4:-51864327 | None:intergenic |
| CTTTCTTTATATACTGCACT+AGG | 0.479696 | 2_4:+51865121 | Msa0333820:CDS |
| AGCTGAAATCTTTCTGATGT+TGG | 0.479781 | 2_4:-51867114 | None:intergenic |
| TGCAGCTTTGAAATTGGTTG+GGG | 0.485824 | 2_4:+51865768 | Msa0333820:CDS |
| TTCACCAAATCTTTCGGCTG+TGG | 0.487173 | 2_4:-51867448 | None:intergenic |
| CAAAGAGGTGGTTGAGGCGA+TGG | 0.487602 | 2_4:+51866404 | Msa0333820:CDS |
| AACTTGTTTCAACAAGTGCC+AGG | 0.492140 | 2_4:-51862745 | None:intergenic |
| TAGTTTGGTAAGACCGAGGA+TGG | 0.494244 | 2_4:+51862707 | Msa0333820:exon |
| GTACATTCGGACTGTGATGT+TGG | 0.495071 | 2_4:-51866567 | None:intergenic |
| GCAGAGATACATGGCAATGA+TGG | 0.495415 | 2_4:+51864357 | Msa0333820:CDS |
| CAGGAAGGTGCATCTGGTTG+CGG | 0.497828 | 2_4:-51863079 | None:intergenic |
| ATCTTTCTGATGTTGGTGAA+TGG | 0.499491 | 2_4:-51867107 | None:intergenic |
| TCTTGGGCTTAGACCTGGCC+AGG | 0.502152 | 2_4:-51866769 | None:intergenic |
| ACTAAGTACCTCGTTAATAG+AGG | 0.503924 | 2_4:-51866427 | None:intergenic |
| TATTTGGTTGGTGGACTCAA+AGG | 0.506374 | 2_4:+51866139 | Msa0333820:CDS |
| AATAATGCATACATATTCCC+TGG | 0.508008 | 2_4:+51866863 | Msa0333820:CDS |
| GCCTAGGTTTAATAATGTCT+GGG | 0.511042 | 2_4:+51866891 | Msa0333820:CDS |
| ATTTGGTTGGTGGACTCAAA+GGG | 0.512793 | 2_4:+51866140 | Msa0333820:CDS |
| CGAGATCCACACTTCAACAA+AGG | 0.513276 | 2_4:+51864208 | Msa0333820:CDS |
| TTCCTCACCTGAGTTTCTTG+AGG | 0.515530 | 2_4:-51864298 | None:intergenic |
| GTAAGACCGAGGATGGGAAA+TGG | 0.515743 | 2_4:+51862714 | Msa0333820:exon |
| CATTTCTGATACAGCAAAGC+AGG | 0.516038 | 2_4:+51863019 | Msa0333820:intron |
| ACAGTGCTTATTGGAACATC+GGG | 0.517722 | 2_4:+51866363 | Msa0333820:CDS |
| GCGCAAGAATATTTGGTTGG+TGG | 0.519227 | 2_4:+51866130 | Msa0333820:CDS |
| TGCTCAGGATTAGGTGGGAG+TGG | 0.522946 | 2_4:+51863446 | Msa0333820:CDS |
| AAGTCATAATTGTATTGGGT+GGG | 0.523261 | 2_4:+51867586 | Msa0333820:three_prime_UTR |
| CATCTGTGGTGGACAGAGAA+GGG | 0.524428 | 2_4:+51863472 | Msa0333820:CDS |
| CAGTTGGAGTATACACGATT+GGG | 0.524429 | 2_4:-51864656 | None:intergenic |
| TGGCAAGCCTCGCCAACAGT+TGG | 0.524943 | 2_4:-51864672 | None:intergenic |
| CACCAAGGAATAAGAATTTG+TGG | 0.527209 | 2_4:-51865804 | None:intergenic |
| AAATTCTTATTCCTTGGTGC+CGG | 0.527719 | 2_4:+51865808 | Msa0333820:CDS |
| TCAATGATGAATTATATATC+GGG | 0.527768 | 2_4:+51865336 | Msa0333820:CDS |
| ACTTACAGGCAGCAAGAAGC+AGG | 0.528795 | 2_4:-51866934 | None:intergenic |
| CGAGGACCGCCACCGGAGAT+CGG | 0.530083 | 2_4:-51863623 | None:intergenic |
| AGAACGGATCTTGGGTCTTG+GGG | 0.533680 | 2_4:+51864954 | Msa0333820:CDS |
| GAGATCCACACTTCAACAAA+GGG | 0.535263 | 2_4:+51864209 | Msa0333820:CDS |
| AAGGGGAAAGTGTTTGTGCC+TGG | 0.536779 | 2_4:+51866751 | Msa0333820:CDS |
| CCAAATCTTTCGGCTGTGGA+AGG | 0.537409 | 2_4:-51867444 | None:intergenic |
| GCTGCTAAAGCTTATGAACT+TGG | 0.538654 | 2_4:+51867155 | Msa0333820:CDS |
| TGAACACCATTTCCCATCCT+CGG | 0.538701 | 2_4:-51862720 | None:intergenic |
| ACAGTTGGAGTATACACGAT+TGG | 0.538743 | 2_4:-51864657 | None:intergenic |
| CAGGGTTGCTCAGGATTAGG+TGG | 0.538947 | 2_4:+51863440 | Msa0333820:intron |
| ATCAGAAGAGAACTTTGAGA+AGG | 0.539232 | 2_4:+51867070 | Msa0333820:CDS |
| CAACATCAATAGTAATAGGC+AGG | 0.539508 | 2_4:-51865292 | None:intergenic |
| TTCTGATGTTGGTGAATGGT+GGG | 0.541430 | 2_4:-51867103 | None:intergenic |
| GAATGGAACAGCTGAGGCAT+TGG | 0.543029 | 2_4:+51867037 | Msa0333820:intron |
| AACTATTCCTCAAGAAACTC+AGG | 0.543335 | 2_4:+51864291 | Msa0333820:CDS |
| AGAGAAGGGGTTATGGACCT+TGG | 0.544391 | 2_4:+51863486 | Msa0333820:CDS |
| TAGTCGTAACTGACGGAGAA+CGG | 0.544724 | 2_4:+51864938 | Msa0333820:CDS |
| GATGCAGACAAATGCCCCAT+TGG | 0.548923 | 2_4:+51866100 | Msa0333820:intron |
| CAAGTCATAATTGTATTGGG+TGG | 0.549761 | 2_4:+51867585 | Msa0333820:three_prime_UTR |
| TCAGAAGAGAACTTTGAGAA+GGG | 0.550927 | 2_4:+51867071 | Msa0333820:CDS |
| GCAAAGACGAGCAACTGGGC+AGG | 0.551006 | 2_4:+51865364 | Msa0333820:CDS |
| GTGGATGATAATCCGATCTC+CGG | 0.551065 | 2_4:+51863611 | Msa0333820:CDS |
| GAGAAAATGGATTACCAGGA+AGG | 0.553962 | 2_4:-51863094 | None:intergenic |
| TTATTGTCTTGTTGTATCAC+CGG | 0.554736 | 2_4:-51867513 | None:intergenic |
| GCCAACCCTTTGTTGAAGTG+TGG | 0.558358 | 2_4:-51864214 | None:intergenic |
| GATAATCCGATCTCCGGTGG+CGG | 0.561055 | 2_4:+51863617 | Msa0333820:CDS |
| ACTGCAGTCAAGCAAACTTA+CGG | 0.561180 | 2_4:+51865416 | Msa0333820:CDS |
| ATTAAACCTAGGCCGAAACC+AGG | 0.561358 | 2_4:-51866881 | None:intergenic |
| TTCTTGAGGAATAGTTGTTG+GGG | 0.562054 | 2_4:-51864284 | None:intergenic |
| TCCAACATTTCAAGAAGCCG+TGG | 0.562460 | 2_4:+51866192 | Msa0333820:CDS |
| GTATCACCGGTAGCTTCTGT+AGG | 0.562772 | 2_4:-51867500 | None:intergenic |
| AGTTCCGCTGCAGAGATACA+TGG | 0.564512 | 2_4:+51864348 | Msa0333820:CDS |
| AACATCGCGAGGACCGCCAC+CGG | 0.565118 | 2_4:-51863630 | None:intergenic |
| TTTGTTCCAGGGAACAGCAT+CGG | 0.566162 | 2_4:+51865726 | Msa0333820:intron |
| GATGTTCCAATAAGCACTGT+TGG | 0.567606 | 2_4:-51866360 | None:intergenic |
| CAAGCAGATCAAAAGCATTG+TGG | 0.567935 | 2_4:-51865573 | None:intergenic |
| ACATCTGTGGTGGACAGAGA+AGG | 0.570588 | 2_4:+51863471 | Msa0333820:CDS |
| GGAAGCGGTGGTTGAAGATG+TGG | 0.573628 | 2_4:+51863592 | Msa0333820:CDS |
| AACAGTGCTTATTGGAACAT+CGG | 0.574999 | 2_4:+51866362 | Msa0333820:CDS |
| TTTCGCCGGTTGAATATAAG+GGG | 0.577166 | 2_4:+51866734 | Msa0333820:CDS |
| GGTTGCGGAGATCATGATGA+TGG | 0.581814 | 2_4:-51863064 | None:intergenic |
| TGGCAGTGTTGTTAATGTGA+TGG | 0.582189 | 2_4:+51863544 | Msa0333820:CDS |
| TGAAATATACTTACAGCTGA+AGG | 0.582276 | 2_4:-51865154 | None:intergenic |
| TTTCTGATGTTGGTGAATGG+TGG | 0.584930 | 2_4:-51867104 | None:intergenic |
| CTTATTGGAACATCGGGACA+AGG | 0.586028 | 2_4:+51866369 | Msa0333820:CDS |
| ATCGTGTATACTCCAACTGT+TGG | 0.586387 | 2_4:+51864660 | Msa0333820:CDS |
| GACATACACGTCACTCTCCA+AGG | 0.588877 | 2_4:-51863503 | None:intergenic |
| CTTATTCCTTGGTGCCGGCG+AGG | 0.593339 | 2_4:+51865813 | Msa0333820:CDS |
| GGTTTGTAAGGAAATTAGGA+AGG | 0.597977 | 2_4:+51867607 | Msa0333820:three_prime_UTR |
| AGTGCGCAAGAATATTTGGT+TGG | 0.599784 | 2_4:+51866127 | Msa0333820:CDS |
| CCGGTAGCTTCTGTAGGCTG+GGG | 0.599908 | 2_4:-51867494 | None:intergenic |
| AGGAAATTAGGAAGGTGTAG+TGG | 0.603029 | 2_4:+51867615 | Msa0333820:three_prime_UTR |
| TCCACACTTCAACAAAGGGT+TGG | 0.604356 | 2_4:+51864213 | Msa0333820:CDS |
| GACATACCTCGCCGGCACCA+AGG | 0.605182 | 2_4:-51865819 | None:intergenic |
| GTTTACCAAAGAGGTGGTTG+AGG | 0.606667 | 2_4:+51866398 | Msa0333820:CDS |
| TCCTCGCGATGTTTATGGCG+AGG | 0.611759 | 2_4:+51863640 | Msa0333820:CDS |
| GTATACTCCAACTGTTGGCG+AGG | 0.612280 | 2_4:+51864665 | Msa0333820:CDS |
| TCAGGGGATGGGAATACCGG+TGG | 0.614003 | 2_4:+51865093 | Msa0333820:intron |
| GGTTCGTGTTCATGAGCCCA+CGG | 0.614980 | 2_4:-51866209 | None:intergenic |
| TGGGGTATACATACAGCTCT+CGG | 0.615153 | 2_4:-51867476 | None:intergenic |
| GATGATAATCCGATCTCCGG+TGG | 0.620961 | 2_4:+51863614 | Msa0333820:CDS |
| AGGAAGTGCGTTTACCAAAG+AGG | 0.621719 | 2_4:+51866389 | Msa0333820:CDS |
| TCCTCGCCATAAACATCGCG+AGG | 0.626700 | 2_4:-51863641 | None:intergenic |
| GGAGATCATGATGATGGGTA+TGG | 0.627196 | 2_4:-51863058 | None:intergenic |
| CCCCAGCCTACAGAAGCTAC+CGG | 0.627715 | 2_4:+51867494 | Msa0333820:CDS |
| ATCTGTGGTGGACAGAGAAG+GGG | 0.627759 | 2_4:+51863473 | Msa0333820:CDS |
| GTACATTAACAGCATCGAGA+AGG | 0.628699 | 2_4:-51866241 | None:intergenic |
| TTTCGGCTGTGGAAGGCGAG+TGG | 0.629320 | 2_4:-51867437 | None:intergenic |
| GGACGTGCGATCTTTGCAAG+TGG | 0.629712 | 2_4:+51866703 | Msa0333820:CDS |
| AGGGTTGCTCAGGATTAGGT+GGG | 0.630605 | 2_4:+51863441 | Msa0333820:intron |
| GGGAGTGGTAACATCTGTGG+TGG | 0.633634 | 2_4:+51863461 | Msa0333820:CDS |
| AGTGGTAGTTGGACTACTAA+GGG | 0.634455 | 2_4:+51867633 | Msa0333820:three_prime_UTR |
| GACGTGCGATCTTTGCAAGT+GGG | 0.636596 | 2_4:+51866704 | Msa0333820:CDS |
| TTCCTCAAGAAACTCAGGTG+AGG | 0.644386 | 2_4:+51864296 | Msa0333820:CDS |
| AGGAATAAGACATACCTCGC+CGG | 0.646107 | 2_4:-51865827 | None:intergenic |
| TCTTTATATACTGCACTAGG+AGG | 0.647726 | 2_4:+51865124 | Msa0333820:CDS |
| CAGGTCGTCATGTACACGAA+TGG | 0.648656 | 2_4:-51866915 | None:intergenic |
| ATTGCCATGTATCTCTGCAG+CGG | 0.652441 | 2_4:-51864352 | None:intergenic |
| TAAAGCAAAGACGAGCAACT+GGG | 0.653376 | 2_4:+51865360 | Msa0333820:CDS |
| CAAGTCATAGTCGTAACTGA+CGG | 0.653587 | 2_4:+51864931 | Msa0333820:CDS |
| CTTGCGCACTTCGTCCAATG+GGG | 0.656636 | 2_4:-51866114 | None:intergenic |
| GGTGGGAGTGGTAACATCTG+TGG | 0.657067 | 2_4:+51863458 | Msa0333820:CDS |
| AAGTGCGTTTACCAAAGAGG+TGG | 0.663594 | 2_4:+51866392 | Msa0333820:CDS |
| CAGGGGATGGGAATACCGGT+GGG | 0.664476 | 2_4:+51865094 | Msa0333820:intron |
| TCTTGAGGAATAGTTGTTGG+GGG | 0.666205 | 2_4:-51864283 | None:intergenic |
| AGTTTGGTAAGACCGAGGAT+GGG | 0.666330 | 2_4:+51862708 | Msa0333820:exon |
| CCAACATTTCAAGAAGCCGT+GGG | 0.668065 | 2_4:+51866193 | Msa0333820:CDS |
| TTAAACCTAGGCCGAAACCA+GGG | 0.671079 | 2_4:-51866880 | None:intergenic |
| AGAAGCTTATACGTGGACCC+AGG | 0.672069 | 2_4:+51866596 | Msa0333820:CDS |
| ATGTTGGGACAAACAACGAG+AGG | 0.675167 | 2_4:+51865309 | Msa0333820:CDS |
| GTTGCGGAGATCATGATGAT+GGG | 0.677547 | 2_4:-51863063 | None:intergenic |
| AGGGATGCACACTACTTGCG+TGG | 0.680318 | 2_4:+51864253 | Msa0333820:CDS |
| AGGGTAGTTTGGTAAGACCG+AGG | 0.680927 | 2_4:+51862703 | Msa0333820:five_prime_UTR |
| CCGCTGAAGAAGCTTATACG+TGG | 0.683051 | 2_4:+51866589 | Msa0333820:CDS |
| CGAGGCTTGCCAGAAATACG+GGG | 0.683912 | 2_4:+51864683 | Msa0333820:CDS |
| GCAGCTTTGAAATTGGTTGG+GGG | 0.689153 | 2_4:+51865769 | Msa0333820:CDS |
| CTAGCAACAGAAACACTCCA+AGG | 0.695145 | 2_4:-51863692 | None:intergenic |
| AAACTTATATAAAGACCCTG+TGG | 0.705672 | 2_4:-51864720 | None:intergenic |
| CCACGTATAAGCTTCTTCAG+CGG | 0.718316 | 2_4:-51866589 | None:intergenic |
| GGCGATGGCCTCTATTAACG+AGG | 0.722025 | 2_4:+51866419 | Msa0333820:CDS |
| TCCCAGACATTATTAAACCT+AGG | 0.725512 | 2_4:-51866892 | None:intergenic |
| AGTCACAAAGTGATCCTCAG+TGG | 0.733513 | 2_4:-51863669 | None:intergenic |
| TGGCGAGGATAAGGCCACTG+AGG | 0.738727 | 2_4:+51863655 | Msa0333820:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAAAAATAAATAAAT+GGG | - | chr2_4:51867543-51867562 | None:intergenic | 0.0% |
| !! | AAAATAAAAAAATAAATAAA+TGG | - | chr2_4:51867544-51867563 | None:intergenic | 0.0% |
| !!! | TAATTTTTTTTTCATTTTGA+TGG | + | chr2_4:51863404-51863423 | Msa0333820:intron | 10.0% |
| !!! | TTTTATTTAATTTAACAAAG+GGG | + | chr2_4:51863926-51863945 | Msa0333820:intron | 10.0% |
| !! | CAAAAAAAATAAAAAATCTT+GGG | - | chr2_4:51866788-51866807 | None:intergenic | 10.0% |
| !! | AATTTCAAATAAATGTAATA+AGG | + | chr2_4:51866977-51866996 | Msa0333820:intron | 10.0% |
| !! | ATAAAAAAATAAATAAATGG+GGG | - | chr2_4:51867541-51867560 | None:intergenic | 10.0% |
| !! | TCTAAATCACAAAATAAATA+TGG | + | chr2_4:51863115-51863134 | Msa0333820:intron | 15.0% |
| !!! | ATTAGTTGATTTATTTATCT+GGG | + | chr2_4:51863344-51863363 | Msa0333820:intron | 15.0% |
| !!! | TTTATTTAATTTAACAAAGG+GGG | + | chr2_4:51863927-51863946 | Msa0333820:intron | 15.0% |
| !!! | ATACTTTGTTTTTAAGTTAT+TGG | + | chr2_4:51865203-51865222 | Msa0333820:intron | 15.0% |
| !! | GATAACATTAAAGATTTAAT+AGG | - | chr2_4:51865253-51865272 | None:intergenic | 15.0% |
| !! | CCAAAAAAAATAAAAAATCT+TGG | - | chr2_4:51866789-51866808 | None:intergenic | 15.0% |
| !!! | CCAAGATTTTTTATTTTTTT+TGG | + | chr2_4:51866786-51866805 | Msa0333820:intron | 15.0% |
| !!! | TTTTAATCTTTCTTATTGAA+TGG | + | chr2_4:51867020-51867039 | Msa0333820:intron | 15.0% |
| !! | AACAAAAGATAAAATAAAGT+CGG | + | chr2_4:51867345-51867364 | Msa0333820:intron | 15.0% |
| !!! | ATTTTGTGATTTAGAGAAAA+TGG | - | chr2_4:51863110-51863129 | None:intergenic | 20.0% |
| !! | TTAAATATTCAACAAGTTTC+TGG | + | chr2_4:51863143-51863162 | Msa0333820:intron | 20.0% |
| !! | TAAATATTCAACAAGTTTCT+GGG | + | chr2_4:51863144-51863163 | Msa0333820:intron | 20.0% |
| !!! | GATTAGTTGATTTATTTATC+TGG | + | chr2_4:51863343-51863362 | Msa0333820:intron | 20.0% |
| !!! | ACCTTTGAAAGAAATTAAAA+AGG | + | chr2_4:51863571-51863590 | Msa0333820:CDS | 20.0% |
| !!! | TCCTTTTTAATTTCTTTCAA+AGG | - | chr2_4:51863575-51863594 | None:intergenic | 20.0% |
| !!! | AAAAGTTTTGTTGTTATGAA+TGG | + | chr2_4:51863888-51863907 | Msa0333820:intron | 20.0% |
| !! | TTAATGTAAAAACCATATGT+TGG | + | chr2_4:51864495-51864514 | Msa0333820:intron | 20.0% |
| !!! | TTTATTGTTTCTTTTTCTCT+TGG | + | chr2_4:51864844-51864863 | Msa0333820:intron | 20.0% |
| !!! | TTATTGTTTCTTTTTCTCTT+GGG | + | chr2_4:51864845-51864864 | Msa0333820:intron | 20.0% |
| !! | CTCAATGATGAATTATATAT+CGG | + | chr2_4:51865335-51865354 | Msa0333820:CDS | 20.0% |
| !! | TCAATGATGAATTATATATC+GGG | + | chr2_4:51865336-51865355 | Msa0333820:CDS | 20.0% |
| !!! | ATGTAGGTTTTTTAAAATCT+TGG | + | chr2_4:51865876-51865895 | Msa0333820:intron | 20.0% |
| !!! | TAGTATTTTCATGTCAAATA+AGG | + | chr2_4:51866811-51866830 | Msa0333820:intron | 20.0% |
| !! | CAAATAAATGTAATAAGGTA+TGG | + | chr2_4:51866982-51867001 | Msa0333820:intron | 20.0% |
| !! | TTTACAAGTCATAATTGTAT+TGG | + | chr2_4:51867581-51867600 | Msa0333820:three_prime_UTR | 20.0% |
| !! | TTACAAGTCATAATTGTATT+GGG | + | chr2_4:51867582-51867601 | Msa0333820:three_prime_UTR | 20.0% |
| !! | GTATATGTTTGAATTGAAAA+TGG | + | chr2_4:51867765-51867784 | Msa0333820:three_prime_UTR | 20.0% |
| !! | ATTAGCTGATTTATTCATCT+GGG | + | chr2_4:51863227-51863246 | Msa0333820:intron | 25.0% |
| !! | TATTAACGTTCACAATTTTC+TGG | + | chr2_4:51863256-51863275 | Msa0333820:intron | 25.0% |
| !! | ATTAACGTTCACAATTTTCT+GGG | + | chr2_4:51863257-51863276 | Msa0333820:intron | 25.0% |
| ! | GAAAGAAATTAAAAAGGAAG+CGG | + | chr2_4:51863577-51863596 | Msa0333820:CDS | 25.0% |
| ! | ATGATATGTGATCAAAATCA+AGG | - | chr2_4:51863759-51863778 | None:intergenic | 25.0% |
| ! | ACATACGACGATATAAATTA+GGG | - | chr2_4:51864001-51864020 | None:intergenic | 25.0% |
| ! | AACATACGACGATATAAATT+AGG | - | chr2_4:51864002-51864021 | None:intergenic | 25.0% |
| !!! | GTTTTGACAATGTTCAAAAA+GGG | - | chr2_4:51864419-51864438 | None:intergenic | 25.0% |
| !!! | AGTTTTGACAATGTTCAAAA+AGG | - | chr2_4:51864420-51864439 | None:intergenic | 25.0% |
| ! | AATTCAAAATATTGCCAATC+AGG | - | chr2_4:51864540-51864559 | None:intergenic | 25.0% |
| ! | CTTTCACTTTGATATATTGT+TGG | + | chr2_4:51864571-51864590 | Msa0333820:intron | 25.0% |
| ! | AATACAAAATAGGTTGTCAA+AGG | - | chr2_4:51865072-51865091 | None:intergenic | 25.0% |
| ! | AAAATATAGATCAACACATC+TGG | + | chr2_4:51865597-51865616 | Msa0333820:CDS | 25.0% |
| !!! | TTTTGAAACTTGTTAGATGT+AGG | + | chr2_4:51865860-51865879 | Msa0333820:intron | 25.0% |
| !! | TTAATGTACGGTCAATTTTT+CGG | + | chr2_4:51866255-51866274 | Msa0333820:intron | 25.0% |
| !! | CATATACACAACATAAGTTT+TGG | + | chr2_4:51866299-51866318 | Msa0333820:intron | 25.0% |
| ! | TTCGAAAGAGAAAGAATAAT+AGG | - | chr2_4:51866546-51866565 | None:intergenic | 25.0% |
| !! | TTGAAATTTGAGCGTATTTT+TGG | + | chr2_4:51866646-51866665 | Msa0333820:intron | 25.0% |
| !!! | TATTCTGTTTCATTTTTCTC+AGG | + | chr2_4:51866681-51866700 | Msa0333820:intron | 25.0% |
| !!! | ATTCTGTTTCATTTTTCTCA+GGG | + | chr2_4:51866682-51866701 | Msa0333820:intron | 25.0% |
| ! | ATGTCAAATAAGGTCTAATT+TGG | + | chr2_4:51866821-51866840 | Msa0333820:intron | 25.0% |
| !! | TTAAGTTGTTTATCCAAGTA+GGG | - | chr2_4:51867256-51867275 | None:intergenic | 25.0% |
| !! | ATTAAGTTGTTTATCCAAGT+AGG | - | chr2_4:51867257-51867276 | None:intergenic | 25.0% |
| !! | ATTATTTTCTCTTTGTGTGA+CGG | + | chr2_4:51867683-51867702 | Msa0333820:three_prime_UTR | 25.0% |
| ! | ACGGTATTCAAATTTAGAAA+TGG | + | chr2_4:51867702-51867721 | Msa0333820:three_prime_UTR | 25.0% |
| ! | TGTGTTGTTGGAATGAATTA+TGG | - | chr2_4:51862818-51862837 | None:intergenic | 30.0% |
| AAGAGAAATGAATGTGTTGT+TGG | - | chr2_4:51862830-51862849 | None:intergenic | 30.0% | |
| !! | TTTAGAGAAAATGGATTACC+AGG | - | chr2_4:51863101-51863120 | None:intergenic | 30.0% |
| ! | GATTAGCTGATTTATTCATC+TGG | + | chr2_4:51863226-51863245 | Msa0333820:intron | 30.0% |
| TCACCAATCAATGATAGAAA+TGG | + | chr2_4:51863524-51863543 | Msa0333820:CDS | 30.0% | |
| TCGAATATGAATCTAGCAAA+GGG | - | chr2_4:51863800-51863819 | None:intergenic | 30.0% | |
| ATCGAATATGAATCTAGCAA+AGG | - | chr2_4:51863801-51863820 | None:intergenic | 30.0% | |
| !!! | TTTTCAAGTACTCCAATTGA+GGG | - | chr2_4:51863852-51863871 | None:intergenic | 30.0% |
| !!! | ATTTTCAAGTACTCCAATTG+AGG | - | chr2_4:51863853-51863872 | None:intergenic | 30.0% |
| CATACGACGATATAAATTAG+GGG | - | chr2_4:51864000-51864019 | None:intergenic | 30.0% | |
| TTTCTTGAGGAATAGTTGTT+GGG | - | chr2_4:51864288-51864307 | None:intergenic | 30.0% | |
| GAAGACATAAATTGTTGACA+AGG | - | chr2_4:51864397-51864416 | None:intergenic | 30.0% | |
| ATGTAAAAACCATATGTTGG+TGG | + | chr2_4:51864498-51864517 | Msa0333820:intron | 30.0% | |
| AATTAACTTCCACCAACATA+TGG | - | chr2_4:51864510-51864529 | None:intergenic | 30.0% | |
| ! | TTTGATATATTGTTGGTTGC+AGG | + | chr2_4:51864578-51864597 | Msa0333820:intron | 30.0% |
| AAACTTATATAAAGACCCTG+TGG | - | chr2_4:51864723-51864742 | None:intergenic | 30.0% | |
| ATTCTACGAGAATAAACAAG+CGG | - | chr2_4:51864771-51864790 | None:intergenic | 30.0% | |
| !! | TTCAAGAAGTACTGAGAAAT+TGG | + | chr2_4:51864893-51864912 | Msa0333820:CDS | 30.0% |
| ! | ACAACCTATTTTGTATTCTC+AGG | + | chr2_4:51865075-51865094 | Msa0333820:intron | 30.0% |
| ! | CAACCTATTTTGTATTCTCA+GGG | + | chr2_4:51865076-51865095 | Msa0333820:intron | 30.0% |
| ! | AACCTATTTTGTATTCTCAG+GGG | + | chr2_4:51865077-51865096 | Msa0333820:intron | 30.0% |
| ! | TATAAAGAAAGTTTTCCCAC+CGG | - | chr2_4:51865112-51865131 | None:intergenic | 30.0% |
| CTTTCTTTATATACTGCACT+AGG | + | chr2_4:51865121-51865140 | Msa0333820:CDS | 30.0% | |
| TGAAATATACTTACAGCTGA+AGG | - | chr2_4:51865157-51865176 | None:intergenic | 30.0% | |
| !! | AGGCACTGTAATGATTTTAA+CGG | - | chr2_4:51865275-51865294 | None:intergenic | 30.0% |
| TGCCTATTACTATTGATGTT+GGG | + | chr2_4:51865294-51865313 | Msa0333820:CDS | 30.0% | |
| GTCTTAATTCAGGTATCAAT+CGG | + | chr2_4:51865446-51865465 | Msa0333820:intron | 30.0% | |
| ! | AAAAGGCACAATTTATTTCC+TGG | + | chr2_4:51865473-51865492 | Msa0333820:intron | 30.0% |
| AATTAGTACAGATTACAGTC+CGG | - | chr2_4:51865503-51865522 | None:intergenic | 30.0% | |
| AGAGACAGAAAACAGAAAAA+TGG | - | chr2_4:51865526-51865545 | None:intergenic | 30.0% | |
| ACTTTATCTACTTTGTTCCA+GGG | + | chr2_4:51865715-51865734 | Msa0333820:intron | 30.0% | |
| AGTTTCAAAATGCTATGTCA+AGG | - | chr2_4:51865850-51865869 | None:intergenic | 30.0% | |
| TAAAATCTTGGAGTAACAAC+TGG | + | chr2_4:51865888-51865907 | Msa0333820:intron | 30.0% | |
| TTACATCCATTTACTCTTTG+TGG | + | chr2_4:51865917-51865936 | Msa0333820:intron | 30.0% | |
| AATGTTGGAGTGATTCTTTA+CGG | - | chr2_4:51866181-51866200 | None:intergenic | 30.0% | |
| TTGTGTATATGCATGTATCA+AGG | - | chr2_4:51866290-51866309 | None:intergenic | 30.0% | |
| ATTCAGACATGAAATTGCAT+GGG | - | chr2_4:51866482-51866501 | None:intergenic | 30.0% | |
| TATTCAGACATGAAATTGCA+TGG | - | chr2_4:51866483-51866502 | None:intergenic | 30.0% | |
| ! | CAAGTTAGTTTCTATTACCT+GGG | - | chr2_4:51866616-51866635 | None:intergenic | 30.0% |
| ! | ACAAGTTAGTTTCTATTACC+TGG | - | chr2_4:51866617-51866636 | None:intergenic | 30.0% |
| !! | ATTTGGATGTTTTGTTCATC+AGG | + | chr2_4:51866838-51866857 | Msa0333820:intron | 30.0% |
| AATAATGCATACATATTCCC+TGG | + | chr2_4:51866863-51866882 | Msa0333820:CDS | 30.0% | |
| GTAATAAGGTATGGTTGAAA+TGG | + | chr2_4:51866991-51867010 | Msa0333820:intron | 30.0% | |
| ! | TACATGTTTTGCATCTTTGA+AGG | + | chr2_4:51867216-51867235 | Msa0333820:intron | 30.0% |
| TAATTAAGCGCTTATAGCAT+AGG | + | chr2_4:51867273-51867292 | Msa0333820:intron | 30.0% | |
| ! | TTATTGTCTTGTTGTATCAC+CGG | - | chr2_4:51867516-51867535 | None:intergenic | 30.0% |
| AAGTCATAATTGTATTGGGT+GGG | + | chr2_4:51867586-51867605 | Msa0333820:three_prime_UTR | 30.0% | |
| TTTGTGAGGTCACCTTAAAA+AGG | - | chr2_4:51862782-51862801 | None:intergenic | 35.0% | |
| TGATGGAAATTATTACGAGC+AGG | + | chr2_4:51863421-51863440 | Msa0333820:intron | 35.0% | |
| GATGGAAATTATTACGAGCA+GGG | + | chr2_4:51863422-51863441 | Msa0333820:intron | 35.0% | |
| ! | CTGCCATTTCTATCATTGAT+TGG | - | chr2_4:51863530-51863549 | None:intergenic | 35.0% |
| AGAAATTAAAAAGGAAGCGG+TGG | + | chr2_4:51863580-51863599 | Msa0333820:CDS | 35.0% | |
| CATAGACAACACAGTAAACA+AGG | - | chr2_4:51863824-51863843 | None:intergenic | 35.0% | |
| ! | TTTCAAGTACTCCAATTGAG+GGG | - | chr2_4:51863851-51863870 | None:intergenic | 35.0% |
| ACATGTAAGAACATGGATCA+TGG | - | chr2_4:51864151-51864170 | None:intergenic | 35.0% | |
| TGATCCATGTTCTTACATGT+TGG | + | chr2_4:51864151-51864170 | Msa0333820:intron | 35.0% | |
| TCAACCAACATGTAAGAACA+TGG | - | chr2_4:51864158-51864177 | None:intergenic | 35.0% | |
| ! | CTTACATGTTGGTTGATTCT+TGG | + | chr2_4:51864162-51864181 | Msa0333820:intron | 35.0% |
| !! | GGTTGATTCTTGGTTTTTAG+TGG | + | chr2_4:51864172-51864191 | Msa0333820:intron | 35.0% |
| !!! | ATCCCTCTCTTTTTCAGTAA+AGG | - | chr2_4:51864239-51864258 | None:intergenic | 35.0% |
| TTCTTGAGGAATAGTTGTTG+GGG | - | chr2_4:51864287-51864306 | None:intergenic | 35.0% | |
| GTTTCTTGAGGAATAGTTGT+TGG | - | chr2_4:51864289-51864308 | None:intergenic | 35.0% | |
| AACTATTCCTCAAGAAACTC+AGG | + | chr2_4:51864291-51864310 | Msa0333820:CDS | 35.0% | |
| TTGGTGGAAGTTAATTCACA+TGG | + | chr2_4:51864514-51864533 | Msa0333820:intron | 35.0% | |
| TAAAAATGTCCCCGTATTTC+TGG | - | chr2_4:51864695-51864714 | None:intergenic | 35.0% | |
| TTCTACGAGAATAAACAAGC+GGG | - | chr2_4:51864770-51864789 | None:intergenic | 35.0% | |
| TAGATTAGAGACTCGATCAA+AGG | - | chr2_4:51864810-51864829 | None:intergenic | 35.0% | |
| !! | TTGTTTCTTTTTCTCTTGGG+CGG | + | chr2_4:51864848-51864867 | Msa0333820:intron | 35.0% |
| TTGGGCGGTGTTTAAATTAT+AGG | + | chr2_4:51864863-51864882 | Msa0333820:intron | 35.0% | |
| TGGGCGGTGTTTAAATTATA+GGG | + | chr2_4:51864864-51864883 | Msa0333820:intron | 35.0% | |
| ATGACTTGAATGTTCTTCTC+AGG | - | chr2_4:51864919-51864938 | None:intergenic | 35.0% | |
| ATCCCCTGAGAATACAAAAT+AGG | - | chr2_4:51865082-51865101 | None:intergenic | 35.0% | |
| ! | TATTTTGTATTCTCAGGGGA+TGG | + | chr2_4:51865081-51865100 | Msa0333820:intron | 35.0% |
| ! | ATTTTGTATTCTCAGGGGAT+GGG | + | chr2_4:51865082-51865101 | Msa0333820:intron | 35.0% |
| TCTTTATATACTGCACTAGG+AGG | + | chr2_4:51865124-51865143 | Msa0333820:CDS | 35.0% | |
| CAACATCAATAGTAATAGGC+AGG | - | chr2_4:51865295-51865314 | None:intergenic | 35.0% | |
| CTGCCTATTACTATTGATGT+TGG | + | chr2_4:51865293-51865312 | Msa0333820:CDS | 35.0% | |
| GTCCCAACATCAATAGTAAT+AGG | - | chr2_4:51865299-51865318 | None:intergenic | 35.0% | |
| CGGTGAAAAAGTCTTAATTC+AGG | + | chr2_4:51865436-51865455 | Msa0333820:CDS | 35.0% | |
| AGGTATCAATCGGTATCAAA+AGG | + | chr2_4:51865456-51865475 | Msa0333820:intron | 35.0% | |
| CAATTTATTTCCTGGCTTAC+CGG | + | chr2_4:51865481-51865500 | Msa0333820:intron | 35.0% | |
| !! | AAGTAGATAAAGTGTCGAGA+CGG | - | chr2_4:51865708-51865727 | None:intergenic | 35.0% |
| CACTTTATCTACTTTGTTCC+AGG | + | chr2_4:51865714-51865733 | Msa0333820:intron | 35.0% | |
| !! | ACTAGTTGCAGCTTTGAAAT+TGG | + | chr2_4:51865762-51865781 | Msa0333820:CDS | 35.0% |
| !! | TTGCAGCTTTGAAATTGGTT+GGG | + | chr2_4:51865767-51865786 | Msa0333820:CDS | 35.0% |
| GACCACAAATTCTTATTCCT+TGG | + | chr2_4:51865802-51865821 | Msa0333820:CDS | 35.0% | |
| CACCAAGGAATAAGAATTTG+TGG | - | chr2_4:51865807-51865826 | None:intergenic | 35.0% | |
| ! | AAATTCTTATTCCTTGGTGC+CGG | + | chr2_4:51865808-51865827 | Msa0333820:CDS | 35.0% |
| CTTAAGCCACAAAGAGTAAA+TGG | - | chr2_4:51865926-51865945 | None:intergenic | 35.0% | |
| TGTGGCTTAAGTGTATTGTT+TGG | + | chr2_4:51865935-51865954 | Msa0333820:intron | 35.0% | |
| TGCACTTGAAACATCTAAAC+AGG | + | chr2_4:51865993-51866012 | Msa0333820:CDS | 35.0% | |
| CTTGAAACATCTAAACAGGT+TGG | + | chr2_4:51865997-51866016 | Msa0333820:intron | 35.0% | |
| ATGTTGGAGTGATTCTTTAC+GGG | - | chr2_4:51866180-51866199 | None:intergenic | 35.0% | |
| TTCTCGATGCTGTTAATGTA+CGG | + | chr2_4:51866243-51866262 | Msa0333820:intron | 35.0% | |
| ATTAAGCCAACAGTGCTTAT+TGG | + | chr2_4:51866354-51866373 | Msa0333820:CDS | 35.0% | |
| AACAGTGCTTATTGGAACAT+CGG | + | chr2_4:51866362-51866381 | Msa0333820:CDS | 35.0% | |
| ACTAAGTACCTCGTTAATAG+AGG | - | chr2_4:51866430-51866449 | None:intergenic | 35.0% | |
| TATATTCAACCGGCGAAAAT+GGG | - | chr2_4:51866732-51866751 | None:intergenic | 35.0% | |
| TTATATTCAACCGGCGAAAA+TGG | - | chr2_4:51866733-51866752 | None:intergenic | 35.0% | |
| !! | ATTTTCGCCGGTTGAATATA+AGG | + | chr2_4:51866732-51866751 | Msa0333820:CDS | 35.0% |
| !! | TTTTCGCCGGTTGAATATAA+GGG | + | chr2_4:51866733-51866752 | Msa0333820:CDS | 35.0% |
| ACTTTCCCCTTATATTCAAC+CGG | - | chr2_4:51866742-51866761 | None:intergenic | 35.0% | |
| GCCTAGGTTTAATAATGTCT+GGG | + | chr2_4:51866891-51866910 | Msa0333820:CDS | 35.0% | |
| TCCCAGACATTATTAAACCT+AGG | - | chr2_4:51866895-51866914 | None:intergenic | 35.0% | |
| CAAATCAGTTGTGAACTTAC+AGG | - | chr2_4:51866951-51866970 | None:intergenic | 35.0% | |
| ! | ATCAGAAGAGAACTTTGAGA+AGG | + | chr2_4:51867070-51867089 | Msa0333820:CDS | 35.0% |
| ! | TCAGAAGAGAACTTTGAGAA+GGG | + | chr2_4:51867071-51867090 | Msa0333820:CDS | 35.0% |
| ! | ATCTTTCTGATGTTGGTGAA+TGG | - | chr2_4:51867110-51867129 | None:intergenic | 35.0% |
| AGCTGAAATCTTTCTGATGT+TGG | - | chr2_4:51867117-51867136 | None:intergenic | 35.0% | |
| ! | ATAAGCTTTAGCAGCAACTT+TGG | - | chr2_4:51867150-51867169 | None:intergenic | 35.0% |
| CAAAGATGCAAAACATGTAC+TGG | - | chr2_4:51867215-51867234 | None:intergenic | 35.0% | |
| ! | TTCTTGTTTGCATTTCTGTC+AGG | + | chr2_4:51867409-51867428 | Msa0333820:intron | 35.0% |
| GCAAACTTCACCAAATCTTT+CGG | - | chr2_4:51867457-51867476 | None:intergenic | 35.0% | |
| CAAGTCATAATTGTATTGGG+TGG | + | chr2_4:51867585-51867604 | Msa0333820:three_prime_UTR | 35.0% | |
| GGTTTGTAAGGAAATTAGGA+AGG | + | chr2_4:51867607-51867626 | Msa0333820:three_prime_UTR | 35.0% | |
| ! | AACTTGTTTCAACAAGTGCC+AGG | - | chr2_4:51862748-51862767 | None:intergenic | 40.0% |
| ! | TGCGAGTTCCAACCTTTTTA+AGG | + | chr2_4:51862767-51862786 | Msa0333820:CDS | 40.0% |
| TGAGGTCACCTTAAAAAGGT+TGG | - | chr2_4:51862778-51862797 | None:intergenic | 40.0% | |
| ! | GAAGTGAAACACGTTTTGTG+AGG | - | chr2_4:51862796-51862815 | None:intergenic | 40.0% |
| GAGAGAGAGAGAGATTGTTA+TGG | - | chr2_4:51862973-51862992 | None:intergenic | 40.0% | |
| CATTTCTGATACAGCAAAGC+AGG | + | chr2_4:51863019-51863038 | Msa0333820:intron | 40.0% | |
| !! | GAGAAAATGGATTACCAGGA+AGG | - | chr2_4:51863097-51863116 | None:intergenic | 40.0% |
| ! | TGGCAGTGTTGTTAATGTGA+TGG | + | chr2_4:51863544-51863563 | Msa0333820:CDS | 40.0% |
| GAGATCCACACTTCAACAAA+GGG | + | chr2_4:51864209-51864228 | Msa0333820:CDS | 40.0% | |
| TGGCCTTTACTGAAAAAGAG+AGG | + | chr2_4:51864233-51864252 | Msa0333820:CDS | 40.0% | |
| GGCCTTTACTGAAAAAGAGA+GGG | + | chr2_4:51864234-51864253 | Msa0333820:CDS | 40.0% | |
| TCTTGAGGAATAGTTGTTGG+GGG | - | chr2_4:51864286-51864305 | None:intergenic | 40.0% | |
| GTCAAAACTGTCGTGTTCTT+TGG | + | chr2_4:51864431-51864450 | Msa0333820:intron | 40.0% | |
| GTTAATTCACATGGCCTGAT+TGG | + | chr2_4:51864523-51864542 | Msa0333820:intron | 40.0% | |
| CAGTTGGAGTATACACGATT+GGG | - | chr2_4:51864659-51864678 | None:intergenic | 40.0% | |
| ACAGTTGGAGTATACACGAT+TGG | - | chr2_4:51864660-51864679 | None:intergenic | 40.0% | |
| ATCGTGTATACTCCAACTGT+TGG | + | chr2_4:51864660-51864679 | Msa0333820:CDS | 40.0% | |
| ! | GACATTTTTATGCGTCCACA+GGG | + | chr2_4:51864705-51864724 | Msa0333820:CDS | 40.0% |
| GGGCGGTGTTTAAATTATAG+GGG | + | chr2_4:51864865-51864884 | Msa0333820:intron | 40.0% | |
| GGCGGTGTTTAAATTATAGG+GGG | + | chr2_4:51864866-51864885 | Msa0333820:intron | 40.0% | |
| GGTGTTTAAATTATAGGGGG+AGG | + | chr2_4:51864869-51864888 | Msa0333820:intron | 40.0% | |
| CAAGTCATAGTCGTAACTGA+CGG | + | chr2_4:51864931-51864950 | Msa0333820:CDS | 40.0% | |
| TAAAGCAAAGACGAGCAACT+GGG | + | chr2_4:51865360-51865379 | Msa0333820:CDS | 40.0% | |
| ACTGCAGTCAAGCAAACTTA+CGG | + | chr2_4:51865416-51865435 | Msa0333820:CDS | 40.0% | |
| !! | CAAGCAGATCAAAAGCATTG+TGG | - | chr2_4:51865576-51865595 | None:intergenic | 40.0% |
| ! | GGTTTTCAACGACGATATTC+AGG | + | chr2_4:51865618-51865637 | Msa0333820:CDS | 40.0% |
| !! | GTTGCAGCTTTGAAATTGGT+TGG | + | chr2_4:51865766-51865785 | Msa0333820:CDS | 40.0% |
| !! | TGCAGCTTTGAAATTGGTTG+GGG | + | chr2_4:51865768-51865787 | Msa0333820:CDS | 40.0% |
| GGCTTAAGTGTATTGTTTGG+TGG | + | chr2_4:51865938-51865957 | Msa0333820:intron | 40.0% | |
| !!! | ACAGGTTGGTAGCTACTTTT+AGG | + | chr2_4:51866011-51866030 | Msa0333820:intron | 40.0% |
| !!! | CAGGTTGGTAGCTACTTTTA+GGG | + | chr2_4:51866012-51866031 | Msa0333820:intron | 40.0% |
| GCATTTGTCTGCATCAAAGA+TGG | - | chr2_4:51866095-51866114 | None:intergenic | 40.0% | |
| ACGAAGTGCGCAAGAATATT+TGG | + | chr2_4:51866123-51866142 | Msa0333820:CDS | 40.0% | |
| AGTGCGCAAGAATATTTGGT+TGG | + | chr2_4:51866127-51866146 | Msa0333820:CDS | 40.0% | |
| !! | TATTTGGTTGGTGGACTCAA+AGG | + | chr2_4:51866139-51866158 | Msa0333820:CDS | 40.0% |
| !! | ATTTGGTTGGTGGACTCAAA+GGG | + | chr2_4:51866140-51866159 | Msa0333820:CDS | 40.0% |
| ! | GCATCGAGAAGGTTTTTAAC+AGG | - | chr2_4:51866233-51866252 | None:intergenic | 40.0% |
| ! | GTACATTAACAGCATCGAGA+AGG | - | chr2_4:51866244-51866263 | None:intergenic | 40.0% |
| ! | GATGTTCCAATAAGCACTGT+TGG | - | chr2_4:51866363-51866382 | None:intergenic | 40.0% |
| ACAGTGCTTATTGGAACATC+GGG | + | chr2_4:51866363-51866382 | Msa0333820:CDS | 40.0% | |
| TACATTCGGACTGTGATGTT+GGG | - | chr2_4:51866569-51866588 | None:intergenic | 40.0% | |
| ! | TTTCGCCGGTTGAATATAAG+GGG | + | chr2_4:51866734-51866753 | Msa0333820:CDS | 40.0% |
| AAAAATCTTGGGCTTAGACC+TGG | - | chr2_4:51866777-51866796 | None:intergenic | 40.0% | |
| GCATACATATTCCCTGGTTT+CGG | + | chr2_4:51866869-51866888 | Msa0333820:CDS | 40.0% | |
| GGCCTAGGTTTAATAATGTC+TGG | + | chr2_4:51866890-51866909 | Msa0333820:CDS | 40.0% | |
| AAGGTATGGTTGAAATGGCA+TGG | + | chr2_4:51866996-51867015 | Msa0333820:intron | 40.0% | |
| CTTATTGAATGGAACAGCTG+AGG | + | chr2_4:51867031-51867050 | Msa0333820:intron | 40.0% | |
| ! | TTCTGATGTTGGTGAATGGT+GGG | - | chr2_4:51867106-51867125 | None:intergenic | 40.0% |
| ! | TTTCTGATGTTGGTGAATGG+TGG | - | chr2_4:51867107-51867126 | None:intergenic | 40.0% |
| GCTGCTAAAGCTTATGAACT+TGG | + | chr2_4:51867155-51867174 | Msa0333820:CDS | 40.0% | |
| ACTGGAGTTGAGAAAAGGAA+AGG | - | chr2_4:51867197-51867216 | None:intergenic | 40.0% | |
| CATGTACTGGAGTTGAGAAA+AGG | - | chr2_4:51867202-51867221 | None:intergenic | 40.0% | |
| AAAATGACGAACACCCTACT+TGG | + | chr2_4:51867240-51867259 | Msa0333820:intron | 40.0% | |
| ! | TTGTATTGGGTGGGTTTGTA+AGG | + | chr2_4:51867595-51867614 | Msa0333820:three_prime_UTR | 40.0% |
| ! | GGTGGGTTTGTAAGGAAATT+AGG | + | chr2_4:51867603-51867622 | Msa0333820:three_prime_UTR | 40.0% |
| ! | AGGAAATTAGGAAGGTGTAG+TGG | + | chr2_4:51867615-51867634 | Msa0333820:three_prime_UTR | 40.0% |
| TAGTGGTAGTTGGACTACTA+AGG | + | chr2_4:51867632-51867651 | Msa0333820:three_prime_UTR | 40.0% | |
| AGTGGTAGTTGGACTACTAA+GGG | + | chr2_4:51867633-51867652 | Msa0333820:three_prime_UTR | 40.0% | |
| GGAAGAAGTTGAGGGTAGTT+TGG | + | chr2_4:51862692-51862711 | Msa0333820:five_prime_UTR | 45.0% | |
| TAGTTTGGTAAGACCGAGGA+TGG | + | chr2_4:51862707-51862726 | Msa0333820:exon | 45.0% | |
| AGTTTGGTAAGACCGAGGAT+GGG | + | chr2_4:51862708-51862727 | Msa0333820:exon | 45.0% | |
| TGAACACCATTTCCCATCCT+CGG | - | chr2_4:51862723-51862742 | None:intergenic | 45.0% | |
| TGGGAAATGGTGTTCAATCC+TGG | + | chr2_4:51862727-51862746 | Msa0333820:CDS | 45.0% | |
| GAGAGAGAAAGAGAGATCAG+AGG | - | chr2_4:51862853-51862872 | None:intergenic | 45.0% | |
| CTCAACTCAGCATCATCATC+AGG | + | chr2_4:51862904-51862923 | Msa0333820:intron | 45.0% | |
| !! | GGAGATCATGATGATGGGTA+TGG | - | chr2_4:51863061-51863080 | None:intergenic | 45.0% |
| GTTGCGGAGATCATGATGAT+GGG | - | chr2_4:51863066-51863085 | None:intergenic | 45.0% | |
| GTGGATGATAATCCGATCTC+CGG | + | chr2_4:51863611-51863630 | Msa0333820:CDS | 45.0% | |
| CGATGTTTATGGCGAGGATA+AGG | + | chr2_4:51863646-51863665 | Msa0333820:CDS | 45.0% | |
| AGTCACAAAGTGATCCTCAG+TGG | - | chr2_4:51863672-51863691 | None:intergenic | 45.0% | |
| AGGATCACTTTGTGACTCCT+TGG | + | chr2_4:51863675-51863694 | Msa0333820:CDS | 45.0% | |
| CTAGCAACAGAAACACTCCA+AGG | - | chr2_4:51863695-51863714 | None:intergenic | 45.0% | |
| ! | CTTGGAGTGTTTCTGTTGCT+AGG | + | chr2_4:51863693-51863712 | Msa0333820:CDS | 45.0% |
| TTTCTGTTGCTAGGTGAGTG+TGG | + | chr2_4:51863702-51863721 | Msa0333820:intron | 45.0% | |
| GTCTATGACATCCCCTCAAT+TGG | + | chr2_4:51863837-51863856 | Msa0333820:intron | 45.0% | |
| CGAGATCCACACTTCAACAA+AGG | + | chr2_4:51864208-51864227 | Msa0333820:CDS | 45.0% | |
| TCCACACTTCAACAAAGGGT+TGG | + | chr2_4:51864213-51864232 | Msa0333820:CDS | 45.0% | |
| TTCCTCAAGAAACTCAGGTG+AGG | + | chr2_4:51864296-51864315 | Msa0333820:CDS | 45.0% | |
| TTCCTCACCTGAGTTTCTTG+AGG | - | chr2_4:51864301-51864320 | None:intergenic | 45.0% | |
| CTTGATATTGGCGTATGTGC+TGG | - | chr2_4:51864330-51864349 | None:intergenic | 45.0% | |
| TCTGCAGCGGAACTTGATAT+TGG | - | chr2_4:51864342-51864361 | None:intergenic | 45.0% | |
| ATTGCCATGTATCTCTGCAG+CGG | - | chr2_4:51864355-51864374 | None:intergenic | 45.0% | |
| GCAGAGATACATGGCAATGA+TGG | + | chr2_4:51864357-51864376 | Msa0333820:CDS | 45.0% | |
| !! | CATGGCAATGATGGATCTTC+AGG | + | chr2_4:51864366-51864385 | Msa0333820:CDS | 45.0% |
| ! | GGACATTTTTATGCGTCCAC+AGG | + | chr2_4:51864704-51864723 | Msa0333820:CDS | 45.0% |
| TAGTCGTAACTGACGGAGAA+CGG | + | chr2_4:51864938-51864957 | Msa0333820:CDS | 45.0% | |
| ATGTTGGGACAAACAACGAG+AGG | + | chr2_4:51865309-51865328 | Msa0333820:CDS | 45.0% | |
| CTAAAGCAAAGACGAGCAAC+TGG | + | chr2_4:51865359-51865378 | Msa0333820:CDS | 45.0% | |
| TTTGTTCCAGGGAACAGCAT+CGG | + | chr2_4:51865726-51865745 | Msa0333820:intron | 45.0% | |
| !! | GCAGCTTTGAAATTGGTTGG+GGG | + | chr2_4:51865769-51865788 | Msa0333820:CDS | 45.0% |
| AGGAATAAGACATACCTCGC+CGG | - | chr2_4:51865830-51865849 | None:intergenic | 45.0% | |
| ! | GTGTATTGTTTGGTGGTTGC+AGG | + | chr2_4:51865945-51865964 | Msa0333820:intron | 45.0% |
| ! | TATTGTTTGGTGGTTGCAGG+CGG | + | chr2_4:51865948-51865967 | Msa0333820:intron | 45.0% |
| !!! | GTTGGTAGCTACTTTTAGGG+TGG | + | chr2_4:51866015-51866034 | Msa0333820:intron | 45.0% |
| GCGCAAGAATATTTGGTTGG+TGG | + | chr2_4:51866130-51866149 | Msa0333820:CDS | 45.0% | |
| TCCAACATTTCAAGAAGCCG+TGG | + | chr2_4:51866192-51866211 | Msa0333820:CDS | 45.0% | |
| CCAACATTTCAAGAAGCCGT+GGG | + | chr2_4:51866193-51866212 | Msa0333820:CDS | 45.0% | |
| CTTATTGGAACATCGGGACA+AGG | + | chr2_4:51866369-51866388 | Msa0333820:CDS | 45.0% | |
| ! | AGGAAGTGCGTTTACCAAAG+AGG | + | chr2_4:51866389-51866408 | Msa0333820:CDS | 45.0% |
| AAGTGCGTTTACCAAAGAGG+TGG | + | chr2_4:51866392-51866411 | Msa0333820:CDS | 45.0% | |
| GTTTACCAAAGAGGTGGTTG+AGG | + | chr2_4:51866398-51866417 | Msa0333820:CDS | 45.0% | |
| TTGCATGGGAGATACTAGCT+AGG | - | chr2_4:51866468-51866487 | None:intergenic | 45.0% | |
| GTACATTCGGACTGTGATGT+TGG | - | chr2_4:51866570-51866589 | None:intergenic | 45.0% | |
| AGCTTCTTCAGCGGTACATT+CGG | - | chr2_4:51866583-51866602 | None:intergenic | 45.0% | |
| CCACGTATAAGCTTCTTCAG+CGG | - | chr2_4:51866592-51866611 | None:intergenic | 45.0% | |
| TTAAACCTAGGCCGAAACCA+GGG | - | chr2_4:51866883-51866902 | None:intergenic | 45.0% | |
| ATTAAACCTAGGCCGAAACC+AGG | - | chr2_4:51866884-51866903 | None:intergenic | 45.0% | |
| GTTTGCATTTCTGTCAGGCT+TGG | + | chr2_4:51867414-51867433 | Msa0333820:intron | 45.0% | |
| TTCACCAAATCTTTCGGCTG+TGG | - | chr2_4:51867451-51867470 | None:intergenic | 45.0% | |
| TGGGGTATACATACAGCTCT+CGG | - | chr2_4:51867479-51867498 | None:intergenic | 45.0% | |
| ! | TAGGAAGGTGTAGTGGTAGT+TGG | + | chr2_4:51867622-51867641 | Msa0333820:three_prime_UTR | 45.0% |
| !!! | TATTTTATTTAATTTAACAA+AGG | + | chr2_4:51863924-51863943 | Msa0333820:intron | 5.0% |
| !!! | ATTTTATTTAATTTAACAAA+GGG | + | chr2_4:51863925-51863944 | Msa0333820:intron | 5.0% |
| !! | AATAAAAAAATAAATAAATG+GGG | - | chr2_4:51867542-51867561 | None:intergenic | 5.0% |
| AGGGTAGTTTGGTAAGACCG+AGG | + | chr2_4:51862703-51862722 | Msa0333820:five_prime_UTR | 50.0% | |
| GTAAGACCGAGGATGGGAAA+TGG | + | chr2_4:51862714-51862733 | Msa0333820:exon | 50.0% | |
| GGTTGCGGAGATCATGATGA+TGG | - | chr2_4:51863067-51863086 | None:intergenic | 50.0% | |
| ! | GATTACCAGGAAGGTGCATC+TGG | - | chr2_4:51863088-51863107 | None:intergenic | 50.0% |
| TATTACGAGCAGGGTTGCTC+AGG | + | chr2_4:51863431-51863450 | Msa0333820:intron | 50.0% | |
| AGGGTTGCTCAGGATTAGGT+GGG | + | chr2_4:51863441-51863460 | Msa0333820:intron | 50.0% | |
| !! | ACATCTGTGGTGGACAGAGA+AGG | + | chr2_4:51863471-51863490 | Msa0333820:CDS | 50.0% |
| !! | CATCTGTGGTGGACAGAGAA+GGG | + | chr2_4:51863472-51863491 | Msa0333820:CDS | 50.0% |
| !! | ATCTGTGGTGGACAGAGAAG+GGG | + | chr2_4:51863473-51863492 | Msa0333820:CDS | 50.0% |
| AGAGAAGGGGTTATGGACCT+TGG | + | chr2_4:51863486-51863505 | Msa0333820:CDS | 50.0% | |
| GACATACACGTCACTCTCCA+AGG | - | chr2_4:51863506-51863525 | None:intergenic | 50.0% | |
| GATGATAATCCGATCTCCGG+TGG | + | chr2_4:51863614-51863633 | Msa0333820:CDS | 50.0% | |
| GCCAACCCTTTGTTGAAGTG+TGG | - | chr2_4:51864217-51864236 | None:intergenic | 50.0% | |
| AGTTCCGCTGCAGAGATACA+TGG | + | chr2_4:51864348-51864367 | Msa0333820:CDS | 50.0% | |
| GTATACTCCAACTGTTGGCG+AGG | + | chr2_4:51864665-51864684 | Msa0333820:CDS | 50.0% | |
| AACTGACGGAGAACGGATCT+TGG | + | chr2_4:51864945-51864964 | Msa0333820:CDS | 50.0% | |
| ACTGACGGAGAACGGATCTT+GGG | + | chr2_4:51864946-51864965 | Msa0333820:CDS | 50.0% | |
| GAGAACGGATCTTGGGTCTT+GGG | + | chr2_4:51864953-51864972 | Msa0333820:CDS | 50.0% | |
| AGAACGGATCTTGGGTCTTG+GGG | + | chr2_4:51864954-51864973 | Msa0333820:CDS | 50.0% | |
| ATCTTGGGTCTTGGGGATCT+AGG | + | chr2_4:51864961-51864980 | Msa0333820:CDS | 50.0% | |
| TCTTGGGGATCTAGGTTGTC+AGG | + | chr2_4:51864969-51864988 | Msa0333820:CDS | 50.0% | |
| TTCTCAGGGGATGGGAATAC+CGG | + | chr2_4:51865090-51865109 | Msa0333820:intron | 50.0% | |
| AGATTACAGTCCGGTAAGCC+AGG | - | chr2_4:51865494-51865513 | None:intergenic | 50.0% | |
| !! | ACAGCATCGGTTGTTCTTGC+TGG | + | chr2_4:51865739-51865758 | Msa0333820:CDS | 50.0% |
| ! | ATTGTTTGGTGGTTGCAGGC+GGG | + | chr2_4:51865949-51865968 | Msa0333820:intron | 50.0% |
| GATGCAGACAAATGCCCCAT+TGG | + | chr2_4:51866100-51866119 | Msa0333820:intron | 50.0% | |
| TCTTGCGCACTTCGTCCAAT+GGG | - | chr2_4:51866118-51866137 | None:intergenic | 50.0% | |
| TTCTTGCGCACTTCGTCCAA+TGG | - | chr2_4:51866119-51866138 | None:intergenic | 50.0% | |
| CCCACGGCTTCTTGAAATGT+TGG | - | chr2_4:51866196-51866215 | None:intergenic | 50.0% | |
| CCGCTGAAGAAGCTTATACG+TGG | + | chr2_4:51866589-51866608 | Msa0333820:CDS | 50.0% | |
| AGAAGCTTATACGTGGACCC+AGG | + | chr2_4:51866596-51866615 | Msa0333820:CDS | 50.0% | |
| GACGTGCGATCTTTGCAAGT+GGG | + | chr2_4:51866704-51866723 | Msa0333820:CDS | 50.0% | |
| !! | AAGGGGAAAGTGTTTGTGCC+TGG | + | chr2_4:51866751-51866770 | Msa0333820:CDS | 50.0% |
| ATATTCCCTGGTTTCGGCCT+AGG | + | chr2_4:51866875-51866894 | Msa0333820:CDS | 50.0% | |
| CAGGTCGTCATGTACACGAA+TGG | - | chr2_4:51866918-51866937 | None:intergenic | 50.0% | |
| ACTTACAGGCAGCAAGAAGC+AGG | - | chr2_4:51866937-51866956 | None:intergenic | 50.0% | |
| GAATGGAACAGCTGAGGCAT+TGG | + | chr2_4:51867037-51867056 | Msa0333820:intron | 50.0% | |
| CCAAATCTTTCGGCTGTGGA+AGG | - | chr2_4:51867447-51867466 | None:intergenic | 50.0% | |
| CCTTCCACAGCCGAAAGATT+TGG | + | chr2_4:51867444-51867463 | Msa0333820:CDS | 50.0% | |
| GTATCACCGGTAGCTTCTGT+AGG | - | chr2_4:51867503-51867522 | None:intergenic | 50.0% | |
| ! | CAGGAAGGTGCATCTGGTTG+CGG | - | chr2_4:51863082-51863101 | None:intergenic | 55.0% |
| GAGCAGGGTTGCTCAGGATT+AGG | + | chr2_4:51863437-51863456 | Msa0333820:intron | 55.0% | |
| CAGGGTTGCTCAGGATTAGG+TGG | + | chr2_4:51863440-51863459 | Msa0333820:intron | 55.0% | |
| TGCTCAGGATTAGGTGGGAG+TGG | + | chr2_4:51863446-51863465 | Msa0333820:CDS | 55.0% | |
| GGTGGGAGTGGTAACATCTG+TGG | + | chr2_4:51863458-51863477 | Msa0333820:CDS | 55.0% | |
| GGGAGTGGTAACATCTGTGG+TGG | + | chr2_4:51863461-51863480 | Msa0333820:CDS | 55.0% | |
| GGTGGACAGAGAAGGGGTTA+TGG | + | chr2_4:51863479-51863498 | Msa0333820:CDS | 55.0% | |
| GGAAGCGGTGGTTGAAGATG+TGG | + | chr2_4:51863592-51863611 | Msa0333820:CDS | 55.0% | |
| GATAATCCGATCTCCGGTGG+CGG | + | chr2_4:51863617-51863636 | Msa0333820:CDS | 55.0% | |
| TCCTCGCGATGTTTATGGCG+AGG | + | chr2_4:51863640-51863659 | Msa0333820:CDS | 55.0% | |
| TCCTCGCCATAAACATCGCG+AGG | - | chr2_4:51863644-51863663 | None:intergenic | 55.0% | |
| AGGGATGCACACTACTTGCG+TGG | + | chr2_4:51864253-51864272 | Msa0333820:CDS | 55.0% | |
| GGCGAGGCTTGCCAGAAATA+CGG | + | chr2_4:51864681-51864700 | Msa0333820:CDS | 55.0% | |
| GCGAGGCTTGCCAGAAATAC+GGG | + | chr2_4:51864682-51864701 | Msa0333820:CDS | 55.0% | |
| CGAGGCTTGCCAGAAATACG+GGG | + | chr2_4:51864683-51864702 | Msa0333820:CDS | 55.0% | |
| GGAGAACGGATCTTGGGTCT+TGG | + | chr2_4:51864952-51864971 | Msa0333820:CDS | 55.0% | |
| GAACAACCGATGCTGTTCCC+TGG | - | chr2_4:51865735-51865754 | None:intergenic | 55.0% | |
| CTTGCGCACTTCGTCCAATG+GGG | - | chr2_4:51866117-51866136 | None:intergenic | 55.0% | |
| GGTTCGTGTTCATGAGCCCA+CGG | - | chr2_4:51866212-51866231 | None:intergenic | 55.0% | |
| CATCGCCTCAACCACCTCTT+TGG | - | chr2_4:51866406-51866425 | None:intergenic | 55.0% | |
| CAAAGAGGTGGTTGAGGCGA+TGG | + | chr2_4:51866404-51866423 | Msa0333820:CDS | 55.0% | |
| GGCGATGGCCTCTATTAACG+AGG | + | chr2_4:51866419-51866438 | Msa0333820:CDS | 55.0% | |
| GGACGTGCGATCTTTGCAAG+TGG | + | chr2_4:51866703-51866722 | Msa0333820:CDS | 55.0% | |
| ! | AAGTGGGAGCCCATTTTCGC+CGG | + | chr2_4:51866720-51866739 | Msa0333820:CDS | 55.0% |
| !! | GAAAGTGTTTGTGCCTGGCC+AGG | + | chr2_4:51866756-51866775 | Msa0333820:CDS | 55.0% |
| ACCGGTAGCTTCTGTAGGCT+GGG | - | chr2_4:51867498-51867517 | None:intergenic | 55.0% | |
| CGCAACCAGATGCACCTTCC+TGG | + | chr2_4:51863080-51863099 | Msa0333820:CDS | 60.0% | |
| GGCGGTCCTCGCGATGTTTA+TGG | + | chr2_4:51863635-51863654 | Msa0333820:CDS | 60.0% | |
| TGGCGAGGATAAGGCCACTG+AGG | + | chr2_4:51863655-51863674 | Msa0333820:CDS | 60.0% | |
| TGGCAAGCCTCGCCAACAGT+TGG | - | chr2_4:51864675-51864694 | None:intergenic | 60.0% | |
| TCAGGGGATGGGAATACCGG+TGG | + | chr2_4:51865093-51865112 | Msa0333820:intron | 60.0% | |
| CAGGGGATGGGAATACCGGT+GGG | + | chr2_4:51865094-51865113 | Msa0333820:intron | 60.0% | |
| GCAAAGACGAGCAACTGGGC+AGG | + | chr2_4:51865364-51865383 | Msa0333820:CDS | 60.0% | |
| !! | CTTATTCCTTGGTGCCGGCG+AGG | + | chr2_4:51865813-51865832 | Msa0333820:CDS | 60.0% |
| TCTTGGGCTTAGACCTGGCC+AGG | - | chr2_4:51866772-51866791 | None:intergenic | 60.0% | |
| TTTCGGCTGTGGAAGGCGAG+TGG | - | chr2_4:51867440-51867459 | None:intergenic | 60.0% | |
| CCGGTAGCTTCTGTAGGCTG+GGG | - | chr2_4:51867497-51867516 | None:intergenic | 60.0% | |
| CCCCAGCCTACAGAAGCTAC+CGG | + | chr2_4:51867494-51867513 | Msa0333820:CDS | 60.0% | |
| CACCGGTAGCTTCTGTAGGC+TGG | - | chr2_4:51867499-51867518 | None:intergenic | 60.0% | |
| AACATCGCGAGGACCGCCAC+CGG | - | chr2_4:51863633-51863652 | None:intergenic | 65.0% | |
| GACATACCTCGCCGGCACCA+AGG | - | chr2_4:51865822-51865841 | None:intergenic | 65.0% | |
| CGAGGACCGCCACCGGAGAT+CGG | - | chr2_4:51863626-51863645 | None:intergenic | 70.0% | |
| TGGTGGTTGCAGGCGGGCAC+TGG | + | chr2_4:51865955-51865974 | Msa0333820:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 51862688 | 51867803 | 51862688 | ID=Msa0333820;Name=Msa0333820 |
| chr2_4 | mRNA | 51862688 | 51867803 | 51862688 | ID=Msa0333820-mRNA-1;Parent=Msa0333820;Name=Msa0333820-mRNA-1;_AED=0.16;_eAED=0.16;_QI=38|1|0.94|1|0.94|1|18|284|675 |
| chr2_4 | exon | 51862688 | 51862788 | 51862688 | ID=Msa0333820-mRNA-1:exon:15543;Parent=Msa0333820-mRNA-1 |
| chr2_4 | exon | 51863033 | 51863101 | 51863033 | ID=Msa0333820-mRNA-1:exon:15544;Parent=Msa0333820-mRNA-1 |
| chr2_4 | exon | 51863443 | 51863714 | 51863443 | ID=Msa0333820-mRNA-1:exon:15545;Parent=Msa0333820-mRNA-1 |
| chr2_4 | exon | 51864192 | 51864387 | 51864192 | ID=Msa0333820-mRNA-1:exon:15546;Parent=Msa0333820-mRNA-1 |
| chr2_4 | exon | 51864600 | 51864751 | 51864600 | ID=Msa0333820-mRNA-1:exon:15547;Parent=Msa0333820-mRNA-1 |
| chr2_4 | exon | 51864885 | 51864990 | 51864885 | ID=Msa0333820-mRNA-1:exon:15548;Parent=Msa0333820-mRNA-1 |
| chr2_4 | exon | 51865097 | 51865162 | 51865097 | ID=Msa0333820-mRNA-1:exon:15549;Parent=Msa0333820-mRNA-1 |
| chr2_4 | exon | 51865290 | 51865457 | 51865290 | ID=Msa0333820-mRNA-1:exon:15550;Parent=Msa0333820-mRNA-1 |
| chr2_4 | exon | 51865556 | 51865639 | 51865556 | ID=Msa0333820-mRNA-1:exon:15551;Parent=Msa0333820-mRNA-1 |
| chr2_4 | exon | 51865736 | 51865834 | 51865736 | ID=Msa0333820-mRNA-1:exon:15552;Parent=Msa0333820-mRNA-1 |
| chr2_4 | exon | 51865967 | 51866014 | 51865967 | ID=Msa0333820-mRNA-1:exon:15553;Parent=Msa0333820-mRNA-1 |
| chr2_4 | exon | 51866107 | 51866259 | 51866107 | ID=Msa0333820-mRNA-1:exon:15554;Parent=Msa0333820-mRNA-1 |
| chr2_4 | exon | 51866351 | 51866440 | 51866351 | ID=Msa0333820-mRNA-1:exon:15555;Parent=Msa0333820-mRNA-1 |
| chr2_4 | exon | 51866540 | 51866617 | 51866540 | ID=Msa0333820-mRNA-1:exon:15556;Parent=Msa0333820-mRNA-1 |
| chr2_4 | exon | 51866703 | 51866777 | 51866703 | ID=Msa0333820-mRNA-1:exon:15557;Parent=Msa0333820-mRNA-1 |
| chr2_4 | exon | 51866860 | 51866950 | 51866860 | ID=Msa0333820-mRNA-1:exon:15558;Parent=Msa0333820-mRNA-1 |
| chr2_4 | exon | 51867048 | 51867176 | 51867048 | ID=Msa0333820-mRNA-1:exon:15559;Parent=Msa0333820-mRNA-1 |
| chr2_4 | exon | 51867431 | 51867803 | 51867431 | ID=Msa0333820-mRNA-1:exon:15560;Parent=Msa0333820-mRNA-1 |
| chr2_4 | five_prime_UTR | 51862688 | 51862725 | 51862688 | ID=Msa0333820-mRNA-1:five_prime_utr;Parent=Msa0333820-mRNA-1 |
| chr2_4 | CDS | 51862726 | 51862788 | 51862726 | ID=Msa0333820-mRNA-1:cds;Parent=Msa0333820-mRNA-1 |
| chr2_4 | CDS | 51863033 | 51863101 | 51863033 | ID=Msa0333820-mRNA-1:cds;Parent=Msa0333820-mRNA-1 |
| chr2_4 | CDS | 51863443 | 51863714 | 51863443 | ID=Msa0333820-mRNA-1:cds;Parent=Msa0333820-mRNA-1 |
| chr2_4 | CDS | 51864192 | 51864387 | 51864192 | ID=Msa0333820-mRNA-1:cds;Parent=Msa0333820-mRNA-1 |
| chr2_4 | CDS | 51864600 | 51864751 | 51864600 | ID=Msa0333820-mRNA-1:cds;Parent=Msa0333820-mRNA-1 |
| chr2_4 | CDS | 51864885 | 51864990 | 51864885 | ID=Msa0333820-mRNA-1:cds;Parent=Msa0333820-mRNA-1 |
| chr2_4 | CDS | 51865097 | 51865162 | 51865097 | ID=Msa0333820-mRNA-1:cds;Parent=Msa0333820-mRNA-1 |
| chr2_4 | CDS | 51865290 | 51865457 | 51865290 | ID=Msa0333820-mRNA-1:cds;Parent=Msa0333820-mRNA-1 |
| chr2_4 | CDS | 51865556 | 51865639 | 51865556 | ID=Msa0333820-mRNA-1:cds;Parent=Msa0333820-mRNA-1 |
| chr2_4 | CDS | 51865736 | 51865834 | 51865736 | ID=Msa0333820-mRNA-1:cds;Parent=Msa0333820-mRNA-1 |
| chr2_4 | CDS | 51865967 | 51866014 | 51865967 | ID=Msa0333820-mRNA-1:cds;Parent=Msa0333820-mRNA-1 |
| chr2_4 | CDS | 51866107 | 51866259 | 51866107 | ID=Msa0333820-mRNA-1:cds;Parent=Msa0333820-mRNA-1 |
| chr2_4 | CDS | 51866351 | 51866440 | 51866351 | ID=Msa0333820-mRNA-1:cds;Parent=Msa0333820-mRNA-1 |
| chr2_4 | CDS | 51866540 | 51866617 | 51866540 | ID=Msa0333820-mRNA-1:cds;Parent=Msa0333820-mRNA-1 |
| chr2_4 | CDS | 51866703 | 51866777 | 51866703 | ID=Msa0333820-mRNA-1:cds;Parent=Msa0333820-mRNA-1 |
| chr2_4 | CDS | 51866860 | 51866950 | 51866860 | ID=Msa0333820-mRNA-1:cds;Parent=Msa0333820-mRNA-1 |
| chr2_4 | CDS | 51867048 | 51867176 | 51867048 | ID=Msa0333820-mRNA-1:cds;Parent=Msa0333820-mRNA-1 |
| chr2_4 | CDS | 51867431 | 51867519 | 51867431 | ID=Msa0333820-mRNA-1:cds;Parent=Msa0333820-mRNA-1 |
| chr2_4 | three_prime_UTR | 51867520 | 51867803 | 51867520 | ID=Msa0333820-mRNA-1:three_prime_utr;Parent=Msa0333820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
