AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0224810


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0224810 MtrunA17_Chr2g0331001 96.579 1140 39 0 1 1140 1 1140 0.0 2260
Msa0224810 MtrunA17_Chr5g0439481 85.789 1140 161 1 1 1140 1 1139 0.0 1937
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0224810 AT5G48120.3 45.620 1153 591 11 1 1138 2 1133 0.0 953
Msa0224810 AT5G48120.1 45.620 1153 591 11 1 1138 2 1133 0.0 953
Msa0224810 AT5G48120.2 45.620 1153 591 11 1 1138 2 1133 0.0 953

Find 226 sgRNAs with CRISPR-Local

Find 627 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTAAGAATGATGGATAAAT+TGG 0.076592 2_1:+74767991 Msa0224810:CDS
AGACACTTTATATACTTATT+TGG 0.080986 2_1:+74767667 Msa0224810:CDS
TGCAGAAGCCCTCTTATATT+TGG 0.180661 2_1:-74770414 None:intergenic
ATATTCTCAAATGTTGATTT+TGG 0.185446 2_1:-74769100 None:intergenic
TGCAATTTGCTGTGGATATT+TGG 0.195724 2_1:+74769968 Msa0224810:CDS
CATGAGACGTTAAATTTCTT+TGG 0.197723 2_1:-74769662 None:intergenic
TCAATTATCATAGAAGATTT+TGG 0.200733 2_1:+74769139 Msa0224810:CDS
TGAAACTGCTGTTCAGCTTT+TGG 0.210397 2_1:+74769683 Msa0224810:CDS
GACACTTTATATACTTATTT+GGG 0.214061 2_1:+74767668 Msa0224810:CDS
ATGATGATTGAAGAGAATTT+AGG 0.220322 2_1:-74762470 None:intergenic
TCAACTACAACTTCGTTCTT+TGG 0.238088 2_1:-74767740 None:intergenic
TCTATGGTTGTAACTCTTAC+TGG 0.239099 2_1:+74773087 Msa0224810:three_prime_UTR
CTTGCAAAATGGCGGTATTT+TGG 0.239622 2_1:+74768039 Msa0224810:CDS
GCTTCTACTTTGAGTGAAAA+AGG 0.241798 2_1:-74769313 None:intergenic
TATACTGAATGAAGCTAAAA+AGG 0.249796 2_1:+74771360 Msa0224810:CDS
TATATTTGGAATGTGTGTTT+TGG 0.269755 2_1:-74770400 None:intergenic
TTATATTCAACACAAAATTA+TGG 0.275586 2_1:+74770571 Msa0224810:CDS
TGTTCCAGTTGCACAGGCTT+TGG 0.282641 2_1:+74770467 Msa0224810:CDS
GCTGTCTTATTTAATGCCTT+TGG 0.286607 2_1:+74768187 Msa0224810:CDS
TACACAGACCTCGGATAAAT+TGG 0.288390 2_1:-74769410 None:intergenic
GTTCCAGTTGCACAGGCTTT+GGG 0.289048 2_1:+74770468 Msa0224810:CDS
TTATTGCTTGTAAATATCTA+TGG 0.291094 2_1:+74773071 Msa0224810:three_prime_UTR
CACTTGCAGGTTCAATCTTT+AGG 0.305593 2_1:+74764200 Msa0224810:CDS
TGATGATTGAAGAGAATTTA+GGG 0.309829 2_1:-74762469 None:intergenic
GCAGCTCATACCAGTTCTTC+TGG 0.317367 2_1:+74771483 Msa0224810:intron
AAAGCAAGCATTAAACATTC+TGG 0.318254 2_1:-74765658 None:intergenic
TTGAAAGCATTATTTCATAT+TGG 0.321286 2_1:+74769187 Msa0224810:CDS
AACATTGATGGCTTGCAAAA+TGG 0.325223 2_1:+74768028 Msa0224810:CDS
CAAAATATACTGGAGCTATT+TGG 0.332127 2_1:+74767633 Msa0224810:CDS
GCCTCACAAAGTGTTAATTT+CGG 0.341373 2_1:+74768061 Msa0224810:CDS
GAGCCCAAAGCCTGTGCAAC+TGG 0.345968 2_1:-74770471 None:intergenic
TTCTTCAGGAATTCTTCTTC+TGG 0.346745 2_1:+74763450 Msa0224810:intron
CATACAAGATATCTTTATCT+TGG 0.362497 2_1:-74771534 None:intergenic
AAAAGTACCCCTTCATCCTT+AGG 0.362568 2_1:-74770345 None:intergenic
TGAATGGTCAATTGTTTCAA+TGG 0.368540 2_1:-74773171 None:intergenic
CAATTGACCATTCATAACTA+TGG 0.370655 2_1:+74773180 Msa0224810:three_prime_UTR
GTTGCAAGCTTGGATGCAAT+TGG 0.372632 2_1:+74762651 Msa0224810:CDS
TCACCTCCAATGTATATATC+AGG 0.379956 2_1:-74768250 None:intergenic
AGCTGAGGAACTATGAAGTA+TGG 0.382318 2_1:-74768167 None:intergenic
ACTTCCGTGCCTTTAGTTGA+AGG 0.385121 2_1:+74770816 Msa0224810:CDS
ATGGGCAGGATCCTTGAAAA+TGG 0.386884 2_1:+74769925 Msa0224810:intron
ATCTTTATCTTGGATATCTT+CGG 0.387694 2_1:-74771524 None:intergenic
GCTACCCGATTCCAAGCTAT+TGG 0.387701 2_1:+74772983 Msa0224810:three_prime_UTR
AAAAGATTGAGTAATGGATT+TGG 0.388568 2_1:-74764171 None:intergenic
ACTTTGAAACACAGCATTGC+AGG 0.391348 2_1:-74767963 None:intergenic
GATTCTCTCTGCTCCATACT+TGG 0.393299 2_1:-74767609 None:intergenic
ATGCCATTTGTGGGCTCTCA+TGG 0.397432 2_1:+74770703 Msa0224810:CDS
AGAGTGTGCTCCTCCAAGTA+TGG 0.397798 2_1:+74767596 Msa0224810:CDS
GGAAGATTGACATTAACTTC+TGG 0.399199 2_1:+74770306 Msa0224810:CDS
GTAGTTCTATACAGAGATAA+AGG 0.401655 2_1:-74768087 None:intergenic
TCTAATAATATGTTACAGAT+AGG 0.403816 2_1:+74770600 Msa0224810:CDS
CGTTTCCAATAGCTTGGAAT+CGG 0.404546 2_1:-74772988 None:intergenic
GAGAGAATCGCAAAATATAC+TGG 0.405525 2_1:+74767623 Msa0224810:CDS
CTTCAAACCAATGCCATTTG+TGG 0.407593 2_1:+74770693 Msa0224810:CDS
AGGTGCGCTCGTTGGTTGCT+TGG 0.408972 2_1:+74764100 Msa0224810:CDS
TAATTCTCCATTTGAGGAAA+AGG 0.410569 2_1:+74770017 Msa0224810:CDS
AGTGTTGTGGGTACGGTAAC+GGG 0.413671 2_1:+74764140 Msa0224810:CDS
GAAGTACTGACCATGCTTGC+CGG 0.413682 2_1:-74772822 None:intergenic
GCGCAATAAGCTGCTGAAGC+AGG 0.414918 2_1:-74767772 None:intergenic
TTAAGAATGATGGATAAATT+GGG 0.416904 2_1:+74767992 Msa0224810:CDS
GTTCTTACTGATTTATGTCT+CGG 0.417407 2_1:+74770651 Msa0224810:CDS
ACTCTCAGGATGCAGGGAAT+TGG 0.421940 2_1:+74768108 Msa0224810:CDS
TCAAGTGAGCCTTCAACTAA+AGG 0.422165 2_1:-74770825 None:intergenic
AATCCATGCAATTTCCTGCT+TGG 0.428610 2_1:-74769993 None:intergenic
AAGAAGAAAGTTTCTGAAGA+AGG 0.429146 2_1:-74767406 None:intergenic
ACACACATTCCAAATATAAG+AGG 0.429195 2_1:+74770405 Msa0224810:CDS
GTAGAAGCATTATATGATAT+CGG 0.429218 2_1:+74769328 Msa0224810:CDS
AAGAAGAAACTACATGCTAT+TGG 0.431368 2_1:+74767902 Msa0224810:CDS
AAGTCTGATACCGTCTTATG+AGG 0.431679 2_1:-74772086 None:intergenic
GACAAGCAATCCAGAAGAAC+TGG 0.432210 2_1:-74771493 None:intergenic
TTGGTTGCTTGGCACTGATA+AGG 0.433268 2_1:+74764111 Msa0224810:CDS
TTCAAACCAATGCCATTTGT+GGG 0.435695 2_1:+74770694 Msa0224810:CDS
TAGCTTGGTTGGGTTCTTCA+AGG 0.437441 2_1:+74763525 Msa0224810:CDS
TGTATTGCAGGTTGCAAGCT+TGG 0.439105 2_1:+74762641 Msa0224810:intron
ATCAGACTTCTCTGCACCAT+TGG 0.440405 2_1:-74770520 None:intergenic
GATCTGATTCTTTATTGTCC+AGG 0.441249 2_1:+74771027 Msa0224810:CDS
TGGCATTCCATAGTACTGTT+TGG 0.446947 2_1:-74769162 None:intergenic
AGGAATTCTTCTTCTGGCAG+AGG 0.451191 2_1:+74763456 Msa0224810:intron
AAAACTATACATAGCTTGGT+TGG 0.451872 2_1:+74763514 Msa0224810:CDS
CAGAATCGTTTCCAATAGCT+TGG 0.456767 2_1:-74772994 None:intergenic
GGGTGTTGTTCCAGTTGCAC+AGG 0.458087 2_1:+74770461 Msa0224810:CDS
CACAGCATTGCAGGAAGGAA+TGG 0.459401 2_1:-74767954 None:intergenic
AATCTTTAGGACTGCATGAC+AGG 0.461991 2_1:+74764213 Msa0224810:CDS
AAAGTACCCCTTCATCCTTA+GGG 0.462262 2_1:-74770344 None:intergenic
TAGGTAATGGATCAAGTAAT+GGG 0.464527 2_1:+74770619 Msa0224810:CDS
CAAGATAAAGATATCTTGTA+TGG 0.465086 2_1:+74771535 Msa0224810:CDS
TGAGATCAATTGCAGAAAGA+TGG 0.467104 2_1:-74771003 None:intergenic
CGCAATAAGCTGCTGAAGCA+GGG 0.468242 2_1:-74767771 None:intergenic
GCTAGAGTAAAAGAGAAATC+TGG 0.469250 2_1:-74767695 None:intergenic
CGATTATATCCTGATCCATC+TGG 0.470202 2_1:+74765703 Msa0224810:CDS
TAGAACTACTCTCAGGATGC+AGG 0.472025 2_1:+74768101 Msa0224810:CDS
GGGCTCTCATGGATTGGAAA+AGG 0.473984 2_1:+74770714 Msa0224810:CDS
TGGGAGTGAACCTGGTGAGA+TGG 0.474738 2_1:-74762559 None:intergenic
AAGTTTCAGCTTAATGATGT+AGG 0.474859 2_1:+74770285 Msa0224810:CDS
TTGCAAGCTTGGATGCAATT+GGG 0.475056 2_1:+74762652 Msa0224810:CDS
CTTACATGTGTAAAGTGAAT+CGG 0.477840 2_1:-74765778 None:intergenic
ATTTGTGGGCTCTCATGGAT+TGG 0.477974 2_1:+74770708 Msa0224810:CDS
TTATTTATAATCAGGCAGAT+TGG 0.478009 2_1:+74764066 Msa0224810:intron
GCACACTCTAAGATATTGTA+AGG 0.481622 2_1:-74767582 None:intergenic
AAACTATACATAGCTTGGTT+GGG 0.482444 2_1:+74763515 Msa0224810:CDS
GTAAAGTGAATCGGAAAGTA+AGG 0.484365 2_1:-74765769 None:intergenic
AATGCACATATTATCATCAA+TGG 0.492111 2_1:+74772041 Msa0224810:CDS
TGGGTTCTTCAAGGAAAGAA+TGG 0.495618 2_1:+74763534 Msa0224810:CDS
AAAATTCAGCGAGTCTGAAA+AGG 0.497418 2_1:+74769222 Msa0224810:CDS
GACATTTCCCCTAAGGATGA+AGG 0.497426 2_1:+74770336 Msa0224810:CDS
CTCATAAGATGCAATGCTGT+TGG 0.497867 2_1:-74767852 None:intergenic
TGCCGATTCAATTGCCTCGT+TGG 0.498692 2_1:+74764658 Msa0224810:CDS
ATAGCTTGGAATCGGGTAGC+TGG 0.500468 2_1:-74772980 None:intergenic
GAGGAAAAGTGTTGTGGGTA+CGG 0.500931 2_1:+74764133 Msa0224810:CDS
AATATGTTACAGATAGGTAA+TGG 0.501229 2_1:+74770606 Msa0224810:CDS
TGAAATTTAGGTTAGAGAGT+TGG 0.502230 2_1:+74762833 Msa0224810:intron
TACCAACGAGGCAATTGAAT+CGG 0.503379 2_1:-74764660 None:intergenic
TTCTTCACTTCATTCAGCAA+AGG 0.505611 2_1:+74767424 Msa0224810:CDS
AAGTGTTGTGGGTACGGTAA+CGG 0.511090 2_1:+74764139 Msa0224810:CDS
AGAGCAGAAATGTGATCCTC+TGG 0.513326 2_1:+74770857 Msa0224810:CDS
GCAGGAAGGAATGGAAGTCT+TGG 0.514261 2_1:-74767945 None:intergenic
TGGAAAGTTAATACCATCTG+TGG 0.516141 2_1:-74767720 None:intergenic
GCAAGTAGACCAGATGGATC+AGG 0.516624 2_1:-74765712 None:intergenic
TTGCAGAAAGATGGGCATCA+TGG 0.520421 2_1:-74770994 None:intergenic
CTGTCAAATGCCGGCAAGCA+TGG 0.520628 2_1:+74772812 Msa0224810:CDS
CTCTTCAACTCCATCTCACC+AGG 0.521795 2_1:+74762549 Msa0224810:CDS
TCTGATCCTGATATATACAT+TGG 0.522783 2_1:+74768244 Msa0224810:CDS
GAAAGTTTCTGAAGAAGGAG+AGG 0.523072 2_1:-74767401 None:intergenic
GCAGTACGAGGTGCGCTCGT+TGG 0.524945 2_1:+74764092 Msa0224810:CDS
TGAGAGCCCACAAATGGCAT+TGG 0.529030 2_1:-74770700 None:intergenic
TACATCATTAAGCTGAAACT+TGG 0.529117 2_1:-74770283 None:intergenic
CTTCAATCATCATCGATCAA+TGG 0.529278 2_1:+74762480 Msa0224810:exon
AGAAGGAGAGGAATGACAAA+TGG 0.529592 2_1:-74767389 None:intergenic
GAAGTCTGATGAACTTACCT+TGG 0.531629 2_1:+74770533 Msa0224810:CDS
AATCCATGAGAGCCCACAAA+TGG 0.532104 2_1:-74770706 None:intergenic
GCTTACAATTCTTCAAGCGA+TGG 0.534202 2_1:+74769372 Msa0224810:CDS
TTATATGATATCGGCATGAC+CGG 0.534310 2_1:+74769337 Msa0224810:CDS
GAGATCAATTGCAGAAAGAT+GGG 0.536252 2_1:-74771002 None:intergenic
TTTAATAATAACCCTCCTCA+AGG 0.537659 2_1:+74770440 Msa0224810:CDS
TTAATCTCCATAGTTATGAA+TGG 0.539279 2_1:-74773187 None:intergenic
GTTTCCAATAGCTTGGAATC+GGG 0.540362 2_1:-74772987 None:intergenic
GGGCATCGATTGCCTCATCT+AGG 0.541580 2_1:+74772933 Msa0224810:intron
ATAGGTAATGGATCAAGTAA+TGG 0.542296 2_1:+74770618 Msa0224810:CDS
AAAATATGACATTTCCCCTA+AGG 0.543815 2_1:+74770329 Msa0224810:CDS
ACATTTCCCCTAAGGATGAA+GGG 0.544414 2_1:+74770337 Msa0224810:CDS
CTCTGTATAGAACTACTCTC+AGG 0.544666 2_1:+74768094 Msa0224810:CDS
GAACCAAGCAGGAAATTGCA+TGG 0.546490 2_1:+74769990 Msa0224810:CDS
ATAAGGAGGAAAAGTGTTGT+GGG 0.547829 2_1:+74764128 Msa0224810:CDS
TCTCTCTGCTCCATACTTGG+AGG 0.547967 2_1:-74767606 None:intergenic
GTACCATCAGAGTCCTTGAT+AGG 0.548690 2_1:-74766147 None:intergenic
AAGCATATTCGGTATTGTAG+TGG 0.552220 2_1:-74762396 None:intergenic
GTGGATATTTGGAACCAAGC+AGG 0.552500 2_1:+74769979 Msa0224810:CDS
GCAATGAAGCTGTCAAATGC+CGG 0.553254 2_1:+74772803 Msa0224810:CDS
TGGAGGTGCAGAGGATTTCG+TGG 0.554978 2_1:+74769945 Msa0224810:CDS
ATTCTTGCAAGCTACTTCCA+TGG 0.557389 2_1:+74769712 Msa0224810:CDS
GATCCTGATATATACATTGG+AGG 0.557628 2_1:+74768247 Msa0224810:CDS
TGCAACGAGATGACCTATCA+AGG 0.557982 2_1:+74766134 Msa0224810:CDS
GATACAGTTATTCGATCAAG+AGG 0.561676 2_1:+74762876 Msa0224810:CDS
AATCGGCATGATGTTCTAGC+AGG 0.561685 2_1:-74764643 None:intergenic
GAAAATTTCATGCCACAGTA+CGG 0.562746 2_1:+74770943 Msa0224810:CDS
TTGTAGAAAAGATTGAGTAA+TGG 0.565621 2_1:-74764177 None:intergenic
GATAAGGAGGAAAAGTGTTG+TGG 0.565850 2_1:+74764127 Msa0224810:CDS
ATGTATATATCAGGATCAGA+GGG 0.568346 2_1:-74768241 None:intergenic
TGCTTCTAGAGTTAAAGCAT+TGG 0.570514 2_1:-74762688 None:intergenic
AAAGCGATGAAAGTTTCTGT+TGG 0.571764 2_1:+74770195 Msa0224810:CDS
ACAATTCTTCAAGCGATGGA+AGG 0.572459 2_1:+74769376 Msa0224810:CDS
CTGGTGAGATGGAGTTGAAG+AGG 0.576523 2_1:-74762548 None:intergenic
CAGTAAAACTATACATAGCT+TGG 0.576918 2_1:+74763510 Msa0224810:CDS
AATGTATATATCAGGATCAG+AGG 0.579679 2_1:-74768242 None:intergenic
TTCTTTACCAGCAAACCAGT+GGG 0.580902 2_1:+74766101 Msa0224810:intron
TCCGAAATTAACACTTTGTG+AGG 0.585080 2_1:-74768062 None:intergenic
CAATGGTCTAACTAAGCTTG+TGG 0.585599 2_1:+74772058 Msa0224810:CDS
GTGGCACATTTCCTTGCCAG+AGG 0.587914 2_1:-74770873 None:intergenic
AAGCGATGAAAGTTTCTGTT+GGG 0.589357 2_1:+74770196 Msa0224810:CDS
TAGCTTGATAATTGATGATG+AGG 0.592254 2_1:+74767814 Msa0224810:CDS
GGAATTGGTTATTCTGTCTG+AGG 0.592338 2_1:+74768123 Msa0224810:CDS
AAGCTTGCAAGTAGACCAGA+TGG 0.592834 2_1:-74765718 None:intergenic
AATATCAAGAGCTTCTTCCA+AGG 0.593516 2_1:-74770550 None:intergenic
GTTGCTTGGCACTGATAAGG+AGG 0.593536 2_1:+74764114 Msa0224810:CDS
TTTAGGACTGCATGACAGGA+AGG 0.596853 2_1:+74764217 Msa0224810:CDS
TATCTATCCGTTGAGAACAC+AGG 0.597641 2_1:+74772544 Msa0224810:CDS
CACACATTCCAAATATAAGA+GGG 0.598820 2_1:+74770406 Msa0224810:CDS
TTAATAATAACCCTCCTCAA+GGG 0.599027 2_1:+74770441 Msa0224810:CDS
TTTCGTGGTGCAATTTGCTG+TGG 0.599331 2_1:+74769960 Msa0224810:CDS
TTTCTTTACCAGCAAACCAG+TGG 0.603166 2_1:+74766100 Msa0224810:intron
TCATTCAGTATAACAATCAG+TGG 0.604482 2_1:-74771349 None:intergenic
TATATTTACCAATTTATCCG+AGG 0.604801 2_1:+74769402 Msa0224810:CDS
TTTACTCTAGCACCCACAGA+TGG 0.604886 2_1:+74767707 Msa0224810:CDS
ACACTTTATATACTTATTTG+GGG 0.607680 2_1:+74767669 Msa0224810:CDS
AGAACTACTCTCAGGATGCA+GGG 0.611678 2_1:+74768102 Msa0224810:CDS
GGAAAAGGTTTGCTGTTGCG+TGG 0.612022 2_1:+74770729 Msa0224810:CDS
CTGGAACAACACCCTTGAGG+AGG 0.612104 2_1:-74770452 None:intergenic
TACAGCTAAGACTGAACCAA+AGG 0.615923 2_1:-74768203 None:intergenic
AGAAATGTGATCCTCTGGCA+AGG 0.616514 2_1:+74770862 Msa0224810:CDS
CCTTGAAAATGGAGGTGCAG+AGG 0.618663 2_1:+74769936 Msa0224810:CDS
AGTCTGATACCGTCTTATGA+GGG 0.618808 2_1:-74772085 None:intergenic
TGACCTATCAAGGACTCTGA+TGG 0.620654 2_1:+74766144 Msa0224810:CDS
GGAAAGTTAATACCATCTGT+GGG 0.621048 2_1:-74767719 None:intergenic
AAACTCACTTCGAAAACCAA+TGG 0.626907 2_1:+74770504 Msa0224810:CDS
GACCGAGGTGGATGAAAGCG+TGG 0.627263 2_1:+74773251 Msa0224810:three_prime_UTR
CATTTCCCCTAAGGATGAAG+GGG 0.630449 2_1:+74770338 Msa0224810:CDS
TTCCACGCTTTCATCCACCT+CGG 0.631137 2_1:-74773253 None:intergenic
CACTTTATATACTTATTTGG+GGG 0.631526 2_1:+74767670 Msa0224810:CDS
TGACAAACCTGTGTTCTCAA+CGG 0.634669 2_1:-74772551 None:intergenic
AAGTACCCCTTCATCCTTAG+GGG 0.634965 2_1:-74770343 None:intergenic
GTCAGACATGACATGTGCAA+AGG 0.638569 2_1:-74771323 None:intergenic
TGAGCCTTCAACTAAAGGCA+CGG 0.639359 2_1:-74770820 None:intergenic
TGGAACAACACCCTTGAGGA+GGG 0.639744 2_1:-74770451 None:intergenic
GGCATTAAATAAGACAGCTG+AGG 0.645320 2_1:-74768182 None:intergenic
TTGCACATGAGTATCCCCAC+TGG 0.650398 2_1:-74766116 None:intergenic
CTTATATAGAGGCCGTACTG+TGG 0.653810 2_1:-74770955 None:intergenic
AAGAACATGAAAAGCTTCCG+TGG 0.653843 2_1:-74770892 None:intergenic
TGAAACACAGCATTGCAGGA+AGG 0.653866 2_1:-74767959 None:intergenic
ATGAAATAATGCTTTCAATG+TGG 0.654390 2_1:-74769182 None:intergenic
AACGGATAGATACGCACATG+AGG 0.657874 2_1:-74772533 None:intergenic
TACGGCCTCTATATAAGCAG+AGG 0.658188 2_1:+74770961 Msa0224810:CDS
GGCAGGATCCTTGAAAATGG+AGG 0.660852 2_1:+74769928 Msa0224810:intron
AACAATTTGTATGACCGAGG+TGG 0.664590 2_1:+74773239 Msa0224810:three_prime_UTR
TCTGGCAAGGAAATGTGCCA+CGG 0.665729 2_1:+74770875 Msa0224810:CDS
CAATCATCATCGATCAATGG+CGG 0.667078 2_1:+74762483 Msa0224810:exon
TGTGGACTACCCTCATAAGA+CGG 0.673290 2_1:+74772076 Msa0224810:CDS
ATTGATGGCTTGCAAAATGG+CGG 0.675116 2_1:+74768031 Msa0224810:CDS
CAACTGGAACAACACCCTTG+AGG 0.676901 2_1:-74770455 None:intergenic
GAAACGAAGACTCCTAGATG+AGG 0.685715 2_1:-74772945 None:intergenic
AATGTGACGAGTCAATTGAG+TGG 0.686701 2_1:-74762509 None:intergenic
GCAGATTGGAAAGCAGTACG+AGG 0.712571 2_1:+74764080 Msa0224810:CDS
TCTTTACCAGCAAACCAGTG+GGG 0.721811 2_1:+74766102 Msa0224810:intron
TGAAACAATTTGTATGACCG+AGG 0.735294 2_1:+74773236 Msa0224810:three_prime_UTR
AGTTGAAGAGGAGTCAACGT+AGG 0.742240 2_1:-74762536 None:intergenic
TGTATATATCAGGATCAGAG+GGG 0.758584 2_1:-74768240 None:intergenic
GGAAGTAAGGACTACCAACG+AGG 0.776043 2_1:-74764672 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATCAAAATTGAATT+GGG - chr2_1:74762587-74762606 None:intergenic 10.0%
!! ATAATATTAGAAAATATCAT+CGG - chr2_1:74764050-74764069 None:intergenic 10.0%
!! TTCTAATATTATTTATAATC+AGG + chr2_1:74764058-74764077 Msa0224810:intron 10.0%
!! TAAATAGAACAAAAATATAA+TGG + chr2_1:74765414-74765433 Msa0224810:intron 10.0%
!! ATTTATATAATAATAAGTAC+AGG - chr2_1:74770099-74770118 None:intergenic 10.0%
!! AAAATTAATAATGATATTGA+TGG + chr2_1:74772435-74772454 Msa0224810:intron 10.0%
!! TAACATTAAGAATAAAAAAT+AGG - chr2_1:74772715-74772734 None:intergenic 10.0%
!! AAAAAATCAAAATTGAATTG+GGG - chr2_1:74762586-74762605 None:intergenic 15.0%
!! GAAAAAAATCAAAATTGAAT+TGG - chr2_1:74762588-74762607 None:intergenic 15.0%
!! TATCTATATACATAAATAGA+CGG - chr2_1:74763067-74763086 None:intergenic 15.0%
!!! TTCTTTTCAAAATGATAAAT+GGG - chr2_1:74763832-74763851 None:intergenic 15.0%
!!! TTTCTTTTCAAAATGATAAA+TGG - chr2_1:74763833-74763852 None:intergenic 15.0%
!! TTCATAAAATATCAAAACTT+TGG - chr2_1:74763908-74763927 None:intergenic 15.0%
!!! AAATTATTTTTGTTGTCAAA+AGG + chr2_1:74764242-74764261 Msa0224810:intron 15.0%
!! CATAAAAATATTTACTAAGA+AGG - chr2_1:74764407-74764426 None:intergenic 15.0%
!! TATTAAAACAGAGAAATTAA+AGG - chr2_1:74764594-74764613 None:intergenic 15.0%
!! AAACTAGATTATTATCAATT+GGG + chr2_1:74765103-74765122 Msa0224810:intron 15.0%
!! CTCTTAATATTTATAGAATT+CGG - chr2_1:74765187-74765206 None:intergenic 15.0%
!!! ATATTTTTGTTCTATTTAGT+TGG - chr2_1:74765412-74765431 None:intergenic 15.0%
!! AATAAATAACAAAGTGAAAA+TGG - chr2_1:74766069-74766088 None:intergenic 15.0%
!!! TTTTAAAAAAAAAGGTATGA+TGG - chr2_1:74767503-74767522 None:intergenic 15.0%
!!! TTTAATTGTATTTTGTTAAG+TGG + chr2_1:74768316-74768335 Msa0224810:intron 15.0%
!! AACATTATAGTAAAAACAAA+AGG - chr2_1:74769537-74769556 None:intergenic 15.0%
!!! TGATATTTTTGAATTGAATA+TGG + chr2_1:74769906-74769925 Msa0224810:intron 15.0%
!!! GATATTTTTGAATTGAATAT+GGG + chr2_1:74769907-74769926 Msa0224810:intron 15.0%
!!! ATTTTAACAATGTTCTTATA+GGG - chr2_1:74770076-74770095 None:intergenic 15.0%
!! TTATATTCAACACAAAATTA+TGG + chr2_1:74770571-74770590 Msa0224810:CDS 15.0%
!!! AATTTTCGAAAATTTTCTTT+GGG - chr2_1:74773033-74773052 None:intergenic 15.0%
!!! AAATTTTCGAAAATTTTCTT+TGG - chr2_1:74773034-74773053 None:intergenic 15.0%
!! AAAAATCAAAATTGAATTGG+GGG - chr2_1:74762585-74762604 None:intergenic 20.0%
!!! TTTTTCCTGTTTTGAAATTT+AGG + chr2_1:74762821-74762840 Msa0224810:intron 20.0%
!! TTATGTATATAGATAGCATA+CGG + chr2_1:74763072-74763091 Msa0224810:intron 20.0%
!! CTTTATATTTACTACAAACA+AGG + chr2_1:74763742-74763761 Msa0224810:intron 20.0%
!! AAAATTATACATCATCAAAG+TGG - chr2_1:74764027-74764046 None:intergenic 20.0%
!! CACTTGACATTATTATATAT+TGG + chr2_1:74764351-74764370 Msa0224810:intron 20.0%
!!! TTATCTGTTATTTTTCTTAG+TGG + chr2_1:74764481-74764500 Msa0224810:intron 20.0%
!!! TATCTGTTATTTTTCTTAGT+GGG + chr2_1:74764482-74764501 Msa0224810:intron 20.0%
!!! TTTCGTTTTACTTTATTCAT+TGG - chr2_1:74764713-74764732 None:intergenic 20.0%
!! AAACAAATCATTCATATCAT+CGG - chr2_1:74764766-74764785 None:intergenic 20.0%
!! GGTAATAAATTGTATAAACA+GGG - chr2_1:74764830-74764849 None:intergenic 20.0%
!! TGGTAATAAATTGTATAAAC+AGG - chr2_1:74764831-74764850 None:intergenic 20.0%
!! CAAACTAGATTATTATCAAT+TGG + chr2_1:74765102-74765121 Msa0224810:intron 20.0%
!!! CTTTTTTTTTTTTTTTGGAG+AGG - chr2_1:74765371-74765390 None:intergenic 20.0%
!!! CTGCTCTTTTTTTTTTTTTT+TGG - chr2_1:74765376-74765395 None:intergenic 20.0%
!! AAAAAAAAAAAAAAGAGCAG+AGG + chr2_1:74765376-74765395 Msa0224810:intron 20.0%
!! AAAAAAAAAAAAAGAGCAGA+GGG + chr2_1:74765377-74765396 Msa0224810:intron 20.0%
!! AAATAAGTATGATTACAAAC+CGG - chr2_1:74765488-74765507 None:intergenic 20.0%
!!! AGGGTCATTTATTTTTTTTT+TGG + chr2_1:74765547-74765566 Msa0224810:intron 20.0%
!!! CTTTTACATACAAAAAATCT+GGG - chr2_1:74766759-74766778 None:intergenic 20.0%
!!! ACTTTTACATACAAAAAATC+TGG - chr2_1:74766760-74766779 None:intergenic 20.0%
!!! ATATATTAGATAGATTTGCT+TGG + chr2_1:74767040-74767059 Msa0224810:intron 20.0%
!!! TATATTAGATAGATTTGCTT+GGG + chr2_1:74767041-74767060 Msa0224810:intron 20.0%
!! ATGGTAATTACACAAATATT+TGG - chr2_1:74767484-74767503 None:intergenic 20.0%
!! AGACACTTTATATACTTATT+TGG + chr2_1:74767667-74767686 Msa0224810:CDS 20.0%
!! GACACTTTATATACTTATTT+GGG + chr2_1:74767668-74767687 Msa0224810:CDS 20.0%
!! ACACTTTATATACTTATTTG+GGG + chr2_1:74767669-74767688 Msa0224810:CDS 20.0%
!!! AAGTTTTTTCTTAAGAATGA+TGG + chr2_1:74767982-74768001 Msa0224810:CDS 20.0%
!!! TTAAGAATGATGGATAAATT+GGG + chr2_1:74767992-74768011 Msa0224810:CDS 20.0%
!!! TGTAAAAGATAGTTCTAATT+TGG - chr2_1:74768931-74768950 None:intergenic 20.0%
!!! ATATTCTCAAATGTTGATTT+TGG - chr2_1:74769103-74769122 None:intergenic 20.0%
!!! TCAATTATCATAGAAGATTT+TGG + chr2_1:74769139-74769158 Msa0224810:CDS 20.0%
!!! TTGAAAGCATTATTTCATAT+TGG + chr2_1:74769187-74769206 Msa0224810:CDS 20.0%
!!! TTTTGTTGTAGACAAAATTA+TGG + chr2_1:74769261-74769280 Msa0224810:CDS 20.0%
!!! ATGTTGTGTTTTTACTTATT+TGG + chr2_1:74769602-74769621 Msa0224810:intron 20.0%
!!! TGGATATTATTTTAACTTTC+TGG + chr2_1:74769622-74769641 Msa0224810:intron 20.0%
!!! GATTTTAACAATGTTCTTAT+AGG - chr2_1:74770077-74770096 None:intergenic 20.0%
!! TCTAATAATATGTTACAGAT+AGG + chr2_1:74770600-74770619 Msa0224810:CDS 20.0%
!! AGCAGTAAATAAATTATACA+AGG - chr2_1:74772112-74772131 None:intergenic 20.0%
!! TGACTTTAGTTGTATTATAA+AGG + chr2_1:74772141-74772160 Msa0224810:intron 20.0%
!! ATTAATAATGATATTGATGG+TGG + chr2_1:74772438-74772457 Msa0224810:intron 20.0%
!!! AACCTTTGTATTTTCATTTT+TGG + chr2_1:74772676-74772695 Msa0224810:intron 20.0%
!! TTCCAAAAATGAAAATACAA+AGG - chr2_1:74772681-74772700 None:intergenic 20.0%
!! TTATTGCTTGTAAATATCTA+TGG + chr2_1:74773071-74773090 Msa0224810:three_prime_UTR 20.0%
!!! TTTTAGGGTTTAAGCATATT+CGG - chr2_1:74762410-74762429 None:intergenic 25.0%
!!! TTTTAGAAATTGTAGTTACG+GGG - chr2_1:74762449-74762468 None:intergenic 25.0%
!!! GTTTTAGAAATTGTAGTTAC+GGG - chr2_1:74762450-74762469 None:intergenic 25.0%
!!! GGTTTTAGAAATTGTAGTTA+CGG - chr2_1:74762451-74762470 None:intergenic 25.0%
! TGATGATTGAAGAGAATTTA+GGG - chr2_1:74762472-74762491 None:intergenic 25.0%
! ATGATGATTGAAGAGAATTT+AGG - chr2_1:74762473-74762492 None:intergenic 25.0%
! TATTAATGCTTATGTATTGC+AGG + chr2_1:74762629-74762648 Msa0224810:intron 25.0%
! TCTAACCTAAATTTCAAAAC+AGG - chr2_1:74762829-74762848 None:intergenic 25.0%
!!! AAAGTTTTAGCATACAAATC+AGG - chr2_1:74762992-74763011 None:intergenic 25.0%
! TCATATTAGTTAATGTCTAC+TGG + chr2_1:74763140-74763159 Msa0224810:intron 25.0%
! CATATTAGTTAATGTCTACT+GGG + chr2_1:74763141-74763160 Msa0224810:intron 25.0%
! TGAAAGGTTACTATCTATAT+GGG + chr2_1:74763270-74763289 Msa0224810:intron 25.0%
! ATTTACAATCATGCACAAAT+AGG - chr2_1:74763369-74763388 None:intergenic 25.0%
!!! TGTAACATGGATTTTAGAAA+AGG - chr2_1:74763697-74763716 None:intergenic 25.0%
! TTATTTATAATCAGGCAGAT+TGG + chr2_1:74764066-74764085 Msa0224810:intron 25.0%
!!! AAAAGATTGAGTAATGGATT+TGG - chr2_1:74764174-74764193 None:intergenic 25.0%
! TTGTAGAAAAGATTGAGTAA+TGG - chr2_1:74764180-74764199 None:intergenic 25.0%
!!! ATCTGTTATTTTTCTTAGTG+GGG + chr2_1:74764483-74764502 Msa0224810:intron 25.0%
! CATTGGTATATAGAAGTTTA+GGG - chr2_1:74764696-74764715 None:intergenic 25.0%
! TCATTGGTATATAGAAGTTT+AGG - chr2_1:74764697-74764716 None:intergenic 25.0%
! TCCTGAATGTACTATTATTA+TGG + chr2_1:74764740-74764759 Msa0224810:intron 25.0%
!! TGGCTTTTAAATGATTAGTA+TGG + chr2_1:74764865-74764884 Msa0224810:intron 25.0%
!! TTAGTATGGCTTTTAAATGA+AGG + chr2_1:74764859-74764878 Msa0224810:intron 25.0%
! TATGATTATGAAGCAACTAT+AGG + chr2_1:74764911-74764930 Msa0224810:intron 25.0%
!! TATTTTACTCAACATAGACA+AGG - chr2_1:74765026-74765045 None:intergenic 25.0%
! AAAGGAATGTATTATTGAAG+CGG - chr2_1:74765055-74765074 None:intergenic 25.0%
!! ATACATTCCTTTTCTTTTCT+TGG + chr2_1:74765063-74765082 Msa0224810:intron 25.0%
! TAAACAACCAAGAAAAGAAA+AGG - chr2_1:74765073-74765092 None:intergenic 25.0%
!!! AAAACATATCAGTTGCTTTT+GGG - chr2_1:74765158-74765177 None:intergenic 25.0%
!!! TAAAACATATCAGTTGCTTT+TGG - chr2_1:74765159-74765178 None:intergenic 25.0%
! TAATAAAGTATAAGAGCAGA+GGG + chr2_1:74765339-74765358 Msa0224810:intron 25.0%
! AAAAAAAAAAAAGAGCAGAG+GGG + chr2_1:74765378-74765397 Msa0224810:intron 25.0%
! AAAAAAATAAATGACCCTAC+CGG - chr2_1:74765545-74765564 None:intergenic 25.0%
! CTTCACAAATTCCAAAAATA+AGG - chr2_1:74765618-74765637 None:intergenic 25.0%
! TAGCAATCAGAATTCATAAA+TGG - chr2_1:74765841-74765860 None:intergenic 25.0%
! CATCAGTACTCAATATAAAA+TGG - chr2_1:74765958-74765977 None:intergenic 25.0%
! TCTGAAAATATCCATTATCA+CGG + chr2_1:74766006-74766025 Msa0224810:intron 25.0%
!! AAGTGAAAATGGATATTTTC+AGG - chr2_1:74766058-74766077 None:intergenic 25.0%
!! TAATTCGTTGTCTGAAATTA+TGG + chr2_1:74766253-74766272 Msa0224810:intron 25.0%
! CATCATTTAAATTTCAGACA+AGG - chr2_1:74766288-74766307 None:intergenic 25.0%
!!! TGCATATTGTTGTCTTTTTT+AGG + chr2_1:74767078-74767097 Msa0224810:intron 25.0%
! ATATACATGTTTGTGTGTAT+AGG + chr2_1:74767158-74767177 Msa0224810:intron 25.0%
! CACTTTATATACTTATTTGG+GGG + chr2_1:74767670-74767689 Msa0224810:CDS 25.0%
!!! CTTAAGAATGATGGATAAAT+TGG + chr2_1:74767991-74768010 Msa0224810:CDS 25.0%
!!! TGGCAGTTTTGTAATTAAAA+GGG - chr2_1:74768526-74768545 None:intergenic 25.0%
! TTCTTGAAATGATGAAAACA+AGG + chr2_1:74768583-74768602 Msa0224810:intron 25.0%
!!! TTTTTTTCCTCAAATCAATC+AGG + chr2_1:74768649-74768668 Msa0224810:intron 25.0%
!! AAATTGTTACTCTTTGGTTT+AGG + chr2_1:74768871-74768890 Msa0224810:intron 25.0%
!!! AAAAGATAGTTCTAATTTGG+TGG - chr2_1:74768928-74768947 None:intergenic 25.0%
!!! TCAAATGTTGATTTTGGTAT+TGG - chr2_1:74769097-74769116 None:intergenic 25.0%
! ATGAAATAATGCTTTCAATG+TGG - chr2_1:74769185-74769204 None:intergenic 25.0%
!!! GTAGAAGCATTATATGATAT+CGG + chr2_1:74769328-74769347 Msa0224810:CDS 25.0%
!! TGTAAGCATATTTTTCATAC+CGG - chr2_1:74769359-74769378 None:intergenic 25.0%
! TATATTTACCAATTTATCCG+AGG + chr2_1:74769402-74769421 Msa0224810:CDS 25.0%
! TTATAGTAAAAACAAAAGGC+CGG - chr2_1:74769533-74769552 None:intergenic 25.0%
!!! TTTCTGGTTTTTGTTTATCT+AGG + chr2_1:74769638-74769657 Msa0224810:intron 25.0%
!! CTTTATTATAGCTGATGTTT+TGG + chr2_1:74769792-74769811 Msa0224810:intron 25.0%
!!! ATGTTTTGGATTAGAAGTAA+CGG + chr2_1:74769806-74769825 Msa0224810:intron 25.0%
!!! ATATTTGGAATGTGTGTTTT+GGG - chr2_1:74770402-74770421 None:intergenic 25.0%
!!! TATATTTGGAATGTGTGTTT+TGG - chr2_1:74770403-74770422 None:intergenic 25.0%
! AATATGTTACAGATAGGTAA+TGG + chr2_1:74770606-74770625 Msa0224810:CDS 25.0%
! TAGAAGTTTAGATATTTGTG+AGG - chr2_1:74771271-74771290 None:intergenic 25.0%
! TATACTGAATGAAGCTAAAA+AGG + chr2_1:74771360-74771379 Msa0224810:CDS 25.0%
! ATCTTTATCTTGGATATCTT+CGG - chr2_1:74771527-74771546 None:intergenic 25.0%
! CATACAAGATATCTTTATCT+TGG - chr2_1:74771537-74771556 None:intergenic 25.0%
! CAAGATAAAGATATCTTGTA+TGG + chr2_1:74771535-74771554 Msa0224810:CDS 25.0%
!!! CTTAACTTACCTGTTTTTTA+AGG + chr2_1:74771620-74771639 Msa0224810:intron 25.0%
! AAACTACAACCTTAAAAAAC+AGG - chr2_1:74771632-74771651 None:intergenic 25.0%
!! GATGACAATCATGTAATTTT+TGG + chr2_1:74771946-74771965 Msa0224810:intron 25.0%
! AATGCACATATTATCATCAA+TGG + chr2_1:74772041-74772060 Msa0224810:CDS 25.0%
! ATTCAAACTGACAAAATGTT+AGG - chr2_1:74772177-74772196 None:intergenic 25.0%
!! TTATTCACGCTGATTATATT+AGG + chr2_1:74772732-74772751 Msa0224810:intron 25.0%
! TGCAACAGATAGAAAATTAA+AGG - chr2_1:74772862-74772881 None:intergenic 25.0%
!! AATTTTCGAAAATTTTGCAC+TGG + chr2_1:74773039-74773058 Msa0224810:three_prime_UTR 25.0%
! TTAATCTCCATAGTTATGAA+TGG - chr2_1:74773190-74773209 None:intergenic 25.0%
! TGAAATTTAGGTTAGAGAGT+TGG + chr2_1:74762833-74762852 Msa0224810:intron 30.0%
ATATGTACTTGTATGCATGT+GGG + chr2_1:74763029-74763048 Msa0224810:intron 30.0%
! TTCTTCAGGAATTCTTTTTC+TGG + chr2_1:74763169-74763188 Msa0224810:intron 30.0%
AAGAGTTATATGTACTTGTG+TGG + chr2_1:74763244-74763263 Msa0224810:intron 30.0%
GTGAAAGGTTACTATCTATA+TGG + chr2_1:74763269-74763288 Msa0224810:intron 30.0%
TCTTATTAGTGAATGTCTAC+TGG + chr2_1:74763421-74763440 Msa0224810:intron 30.0%
CAGTAAAACTATACATAGCT+TGG + chr2_1:74763510-74763529 Msa0224810:CDS 30.0%
AAAACTATACATAGCTTGGT+TGG + chr2_1:74763514-74763533 Msa0224810:CDS 30.0%
AAACTATACATAGCTTGGTT+GGG + chr2_1:74763515-74763534 Msa0224810:CDS 30.0%
!! TTCTAGTTCGTTTGTTATGA+TGG + chr2_1:74763639-74763658 Msa0224810:intron 30.0%
GAATTGTGAGAATAAAGAGA+AGG - chr2_1:74763675-74763694 None:intergenic 30.0%
TGAATGAAATCTCTGTAACA+TGG - chr2_1:74763710-74763729 None:intergenic 30.0%
GGTATATTATGTGTTTGGAA+GGG - chr2_1:74763773-74763792 None:intergenic 30.0%
TGGTATATTATGTGTTTGGA+AGG - chr2_1:74763774-74763793 None:intergenic 30.0%
! GACTTGGTATATTATGTGTT+TGG - chr2_1:74763778-74763797 None:intergenic 30.0%
ATGATAAATGGGATAGAGTT+AGG - chr2_1:74763821-74763840 None:intergenic 30.0%
AGTTTAATCAGCAATGCTAA+AGG - chr2_1:74763946-74763965 None:intergenic 30.0%
! TTTAGCATTGCTGATTAAAC+TGG + chr2_1:74763945-74763964 Msa0224810:intron 30.0%
AAATCATCAATCGCAAAACT+GGG - chr2_1:74764000-74764019 None:intergenic 30.0%
! AATTTTATGCTTCTGCTGTA+AGG + chr2_1:74764271-74764290 Msa0224810:intron 30.0%
TTATCAGTCTGATAGTTGAT+CGG + chr2_1:74764380-74764399 Msa0224810:intron 30.0%
!!! TCTGTTATTTTTCTTAGTGG+GGG + chr2_1:74764484-74764503 Msa0224810:intron 30.0%
TATAGCTTACATGAACTTAG+AGG - chr2_1:74764555-74764574 None:intergenic 30.0%
TATAGAAGTTTAGGGAAGTA+AGG - chr2_1:74764688-74764707 None:intergenic 30.0%
GCCATAATAATAGTACATTC+AGG - chr2_1:74764744-74764763 None:intergenic 30.0%
AAATTGTATAAACAGGGAAG+TGG - chr2_1:74764824-74764843 None:intergenic 30.0%
TTACCAATCAGTTCTTAGTA+TGG + chr2_1:74764845-74764864 Msa0224810:intron 30.0%
CAATAAACTATGAGATACCA+TGG - chr2_1:74764971-74764990 None:intergenic 30.0%
GTAATAAAGTATAAGAGCAG+AGG + chr2_1:74765338-74765357 Msa0224810:intron 30.0%
AAAAAAAAAAAGAGCAGAGG+GGG + chr2_1:74765379-74765398 Msa0224810:intron 30.0%
AAAGCAAGCATTAAACATTC+TGG - chr2_1:74765661-74765680 None:intergenic 30.0%
! TTTTCATATTGTCGAGTCTT+TGG + chr2_1:74765678-74765697 Msa0224810:CDS 30.0%
CTTACATGTGTAAAGTGAAT+CGG - chr2_1:74765781-74765800 None:intergenic 30.0%
CATAAATGGAAGATGTTCAA+TGG - chr2_1:74765827-74765846 None:intergenic 30.0%
ATTAGTGTGTGGATCATATA+TGG - chr2_1:74765883-74765902 None:intergenic 30.0%
CAAATCAGATTATTAGTGTG+TGG - chr2_1:74765894-74765913 None:intergenic 30.0%
!! TTTATATTGAGTACTGATGC+TGG + chr2_1:74765959-74765978 Msa0224810:intron 30.0%
CAAACAAATAACCGTGATAA+TGG - chr2_1:74766020-74766039 None:intergenic 30.0%
ATTTCAGACAACGAATTAAG+AGG - chr2_1:74766251-74766270 None:intergenic 30.0%
! CATGGTTTAAAATCAACAGT+TGG - chr2_1:74766327-74766346 None:intergenic 30.0%
AAAGTACAACGACTATAACA+TGG - chr2_1:74766345-74766364 None:intergenic 30.0%
! TTTTGAACATAGACAGTAGT+TGG + chr2_1:74766457-74766476 Msa0224810:intron 30.0%
!! ACAGTTATGTTGCTTTCTTT+AGG + chr2_1:74766579-74766598 Msa0224810:intron 30.0%
TTCAATAAAAGAAACGCTCA+TGG - chr2_1:74766863-74766882 None:intergenic 30.0%
! TGAGCGTTTCTTTTATTGAA+AGG + chr2_1:74766863-74766882 Msa0224810:intron 30.0%
CTCAAAAGCTGACTAATTAT+TGG - chr2_1:74766916-74766935 None:intergenic 30.0%
!! TTAGCTTTTGCGTTTATTAG+TGG + chr2_1:74766985-74767004 Msa0224810:intron 30.0%
TATATGTCACTCCTAAATCT+AGG - chr2_1:74767023-74767042 None:intergenic 30.0%
TTGCTTCCTTTATTAGGTAA+AGG - chr2_1:74767131-74767150 None:intergenic 30.0%
! TGCATTTTGCTTCCTTTATT+AGG - chr2_1:74767137-74767156 None:intergenic 30.0%
AGGATTCATTTCATGTTGTT+CGG + chr2_1:74767178-74767197 Msa0224810:intron 30.0%
! AAGAAGAAAGTTTCTGAAGA+AGG - chr2_1:74767409-74767428 None:intergenic 30.0%
AACACACAGGAAACTATAAA+TGG - chr2_1:74767537-74767556 None:intergenic 30.0%
ATTTATAGTTTCCTGTGTGT+TGG + chr2_1:74767536-74767555 Msa0224810:intron 30.0%
CAAAATATACTGGAGCTATT+TGG + chr2_1:74767633-74767652 Msa0224810:CDS 30.0%
!! TAGCTTGATAATTGATGATG+AGG + chr2_1:74767814-74767833 Msa0224810:CDS 30.0%
AAGAAGAAACTACATGCTAT+TGG + chr2_1:74767902-74767921 Msa0224810:CDS 30.0%
! TTTTCTGTTAGCAACATTGA+TGG + chr2_1:74768016-74768035 Msa0224810:CDS 30.0%
! GTAGTTCTATACAGAGATAA+AGG - chr2_1:74768090-74768109 None:intergenic 30.0%
ATGTATATATCAGGATCAGA+GGG - chr2_1:74768244-74768263 None:intergenic 30.0%
AATGTATATATCAGGATCAG+AGG - chr2_1:74768245-74768264 None:intergenic 30.0%
TCTGATCCTGATATATACAT+TGG + chr2_1:74768244-74768263 Msa0224810:CDS 30.0%
TCATGATACAACTATTGAAG+AGG - chr2_1:74768346-74768365 None:intergenic 30.0%
!!! CATAGTTTTAGATTTTCCTG+AGG + chr2_1:74768381-74768400 Msa0224810:intron 30.0%
TGATATACTGAGTCATGTAT+TGG + chr2_1:74768422-74768441 Msa0224810:intron 30.0%
! AATATACCCTAGGATTCTTT+TGG - chr2_1:74768471-74768490 None:intergenic 30.0%
AAAGAATCCTAGGGTATATT+TGG + chr2_1:74768471-74768490 Msa0224810:intron 30.0%
!! GTGGCAGTTTTGTAATTAAA+AGG - chr2_1:74768527-74768546 None:intergenic 30.0%
CAAGAAATAGAGAGCAAATA+AGG - chr2_1:74768549-74768568 None:intergenic 30.0%
TGTATAGTGACAAGAAATCT+CGG - chr2_1:74768749-74768768 None:intergenic 30.0%
GTCACTATACACAGTTTAAT+TGG + chr2_1:74768758-74768777 Msa0224810:intron 30.0%
GATGTCAAATTGTTACTCTT+TGG + chr2_1:74768865-74768884 Msa0224810:intron 30.0%
ATATAAACATACACAGACCT+CGG - chr2_1:74769422-74769441 None:intergenic 30.0%
!! TCTCACTTTTAGAAAGTTGT+TGG + chr2_1:74769491-74769510 Msa0224810:intron 30.0%
!! CTCACTTTTAGAAAGTTGTT+GGG + chr2_1:74769492-74769511 Msa0224810:intron 30.0%
CATGAGACGTTAAATTTCTT+TGG - chr2_1:74769665-74769684 None:intergenic 30.0%
ACATTATGCTATTCAGAAAC+TGG + chr2_1:74769867-74769886 Msa0224810:intron 30.0%
! TTTTTGAATTGAATATGGGC+AGG + chr2_1:74769911-74769930 Msa0224810:intron 30.0%
!!! GGATTTTAATTCTCCATTTG+AGG + chr2_1:74770011-74770030 Msa0224810:CDS 30.0%
TAATTCTCCATTTGAGGAAA+AGG + chr2_1:74770017-74770036 Msa0224810:CDS 30.0%
! AGATTTACCTTTTCCTCAAA+TGG - chr2_1:74770027-74770046 None:intergenic 30.0%
GAAAAATCACTATTACTACC+GGG - chr2_1:74770139-74770158 None:intergenic 30.0%
GGAAAAATCACTATTACTAC+CGG - chr2_1:74770140-74770159 None:intergenic 30.0%
TACATCATTAAGCTGAAACT+TGG - chr2_1:74770286-74770305 None:intergenic 30.0%
AAGTTTCAGCTTAATGATGT+AGG + chr2_1:74770285-74770304 Msa0224810:CDS 30.0%
AAAATATGACATTTCCCCTA+AGG + chr2_1:74770329-74770348 Msa0224810:CDS 30.0%
!! TATTTGGAATGTGTGTTTTG+GGG - chr2_1:74770401-74770420 None:intergenic 30.0%
ACACACATTCCAAATATAAG+AGG + chr2_1:74770405-74770424 Msa0224810:CDS 30.0%
CACACATTCCAAATATAAGA+GGG + chr2_1:74770406-74770425 Msa0224810:CDS 30.0%
TTTAATAATAACCCTCCTCA+AGG + chr2_1:74770440-74770459 Msa0224810:CDS 30.0%
TTAATAATAACCCTCCTCAA+GGG + chr2_1:74770441-74770460 Msa0224810:CDS 30.0%
!! ATAGGTAATGGATCAAGTAA+TGG + chr2_1:74770618-74770637 Msa0224810:CDS 30.0%
!! TAGGTAATGGATCAAGTAAT+GGG + chr2_1:74770619-74770638 Msa0224810:CDS 30.0%
!! GTTCTTACTGATTTATGTCT+CGG + chr2_1:74770651-74770670 Msa0224810:CDS 30.0%
AAAAACCTCTGCTTATATAG+AGG - chr2_1:74770969-74770988 None:intergenic 30.0%
! CAGACTAGTTACAGTTAAAA+AGG - chr2_1:74771139-74771158 None:intergenic 30.0%
TCATTCAGTATAACAATCAG+TGG - chr2_1:74771352-74771371 None:intergenic 30.0%
GAGAAAAATGGTAATTACGA+TGG + chr2_1:74771589-74771608 Msa0224810:intron 30.0%
GATCAGTTTCAATGTTAGTA+CGG + chr2_1:74771752-74771771 Msa0224810:intron 30.0%
CATTCTAGTCATAATTGTGT+CGG + chr2_1:74771914-74771933 Msa0224810:intron 30.0%
ATTCTAGTCATAATTGTGTC+GGG + chr2_1:74771915-74771934 Msa0224810:intron 30.0%
!!! GAAGCAGCTTGTTTTTAATT+GGG - chr2_1:74772301-74772320 None:intergenic 30.0%
!!! TGAAGCAGCTTGTTTTTAAT+TGG - chr2_1:74772302-74772321 None:intergenic 30.0%
TTCTCAAACTTATTCAGTGA+TGG + chr2_1:74772335-74772354 Msa0224810:intron 30.0%
CAAAGTTATGAGGGATTTAA+AGG - chr2_1:74772388-74772407 None:intergenic 30.0%
AGATTGCAACAAAGTTATGA+GGG - chr2_1:74772397-74772416 None:intergenic 30.0%
AAGATTGCAACAAAGTTATG+AGG - chr2_1:74772398-74772417 None:intergenic 30.0%
ATTGAACAATCAGCACATAT+TGG - chr2_1:74772619-74772638 None:intergenic 30.0%
GATAGAAAATTAAAGGTTCC+TGG - chr2_1:74772855-74772874 None:intergenic 30.0%
TGAATGGTCAATTGTTTCAA+TGG - chr2_1:74773174-74773193 None:intergenic 30.0%
CAATTGACCATTCATAACTA+TGG + chr2_1:74773180-74773199 Msa0224810:three_prime_UTR 30.0%
AAGCATATTCGGTATTGTAG+TGG - chr2_1:74762399-74762418 None:intergenic 35.0%
CTTCAATCATCATCGATCAA+TGG + chr2_1:74762480-74762499 Msa0224810:exon 35.0%
ATCAAAATTGAATTGGGGGT+GGG - chr2_1:74762581-74762600 None:intergenic 35.0%
AATCAAAATTGAATTGGGGG+TGG - chr2_1:74762582-74762601 None:intergenic 35.0%
!! TGCTTCTAGAGTTAAAGCAT+TGG - chr2_1:74762691-74762710 None:intergenic 35.0%
GATACAGTTATTCGATCAAG+AGG + chr2_1:74762876-74762895 Msa0224810:CDS 35.0%
GAATACAGTTGAATGCGTAT+TGG - chr2_1:74762962-74762981 None:intergenic 35.0%
CATATGTACTTGTATGCATG+TGG + chr2_1:74763028-74763047 Msa0224810:intron 35.0%
TACTATCTATATGGGCATAC+CGG + chr2_1:74763278-74763297 Msa0224810:intron 35.0%
!!! CGGTAGTTTTTTTTATGAGC+AGG - chr2_1:74763315-74763334 None:intergenic 35.0%
TATCTGTATGCGATTGCTAT+CGG - chr2_1:74763335-74763354 None:intergenic 35.0%
TCTACTGGATAAACTTCTTC+AGG + chr2_1:74763436-74763455 Msa0224810:intron 35.0%
TTCTTCAGGAATTCTTCTTC+TGG + chr2_1:74763450-74763469 Msa0224810:intron 35.0%
! TTGCTGATTAAACTGGATTG+TGG + chr2_1:74763952-74763971 Msa0224810:intron 35.0%
CAAATCATCAATCGCAAAAC+TGG - chr2_1:74764001-74764020 None:intergenic 35.0%
!! ATAAGGAGGAAAAGTGTTGT+GGG + chr2_1:74764128-74764147 Msa0224810:CDS 35.0%
! ATCTTTTCTACAACACTTGC+AGG + chr2_1:74764187-74764206 Msa0224810:CDS 35.0%
AGACTTGCATTCAAAGTGAA+AGG + chr2_1:74764315-74764334 Msa0224810:intron 35.0%
!!! CTGTTATTTTTCTTAGTGGG+GGG + chr2_1:74764485-74764504 Msa0224810:intron 35.0%
AAGCCATACTAAGAACTGAT+TGG - chr2_1:74764851-74764870 None:intergenic 35.0%
ATTATGAAGCAACTATAGGC+TGG + chr2_1:74764915-74764934 Msa0224810:intron 35.0%
CTGATATCTCTATGCAAAAG+TGG - chr2_1:74765247-74765266 None:intergenic 35.0%
! CACTTTTGCATAGAGATATC+AGG + chr2_1:74765245-74765264 Msa0224810:intron 35.0%
!! TGTTTCAAGTTTACCGCTTA+TGG + chr2_1:74765507-74765526 Msa0224810:intron 35.0%
TTTGTTCTTGACTCTCTTGT+AGG + chr2_1:74765585-74765604 Msa0224810:intron 35.0%
! TGGATCTTTTTCTGCATCTA+TGG - chr2_1:74765641-74765660 None:intergenic 35.0%
GTAAAGTGAATCGGAAAGTA+AGG - chr2_1:74765772-74765791 None:intergenic 35.0%
TGTGGATCATATATGGTCAT+TGG - chr2_1:74765876-74765895 None:intergenic 35.0%
ATAAAATGGCATAGCCACAT+AGG - chr2_1:74765944-74765963 None:intergenic 35.0%
! GAACTTTTGTCCAGATTTTG+TGG + chr2_1:74766173-74766192 Msa0224810:intron 35.0%
AACTTAAGCACCACAAAATC+TGG - chr2_1:74766186-74766205 None:intergenic 35.0%
! GTTAGAGCAGAACAGTTTTA+TGG + chr2_1:74766414-74766433 Msa0224810:intron 35.0%
CAGCAATTTCTTTCTATCTC+CGG - chr2_1:74766502-74766521 None:intergenic 35.0%
GGAGATAGAAAGAAATTGCT+GGG + chr2_1:74766501-74766520 Msa0224810:intron 35.0%
ACATAACTGTATGTGGATGT+TGG - chr2_1:74766569-74766588 None:intergenic 35.0%
GAAAGCAACATAACTGTATG+TGG - chr2_1:74766576-74766595 None:intergenic 35.0%
TGAGAAGACAGAACATAGAT+GGG - chr2_1:74766620-74766639 None:intergenic 35.0%
ATGAGAAGACAGAACATAGA+TGG - chr2_1:74766621-74766640 None:intergenic 35.0%
! GGATTGCATTTTCTGTGTTT+TGG + chr2_1:74766676-74766695 Msa0224810:intron 35.0%
!! TTGCATTTTCTGTGTTTTGG+TGG + chr2_1:74766679-74766698 Msa0224810:intron 35.0%
ATCCACACACTTGTTTCATA+TGG + chr2_1:74766800-74766819 Msa0224810:intron 35.0%
!!! TGCTTTTAACTTTATTGCCC+TGG + chr2_1:74766961-74766980 Msa0224810:intron 35.0%
TAAACGCAAAAGCTAATCCA+GGG - chr2_1:74766981-74767000 None:intergenic 35.0%
ATAAACGCAAAAGCTAATCC+AGG - chr2_1:74766982-74767001 None:intergenic 35.0%
CTGCTTCCTTTACCTAATAA+AGG + chr2_1:74767122-74767141 Msa0224810:intron 35.0%
GGATTCATTTCATGTTGTTC+GGG + chr2_1:74767179-74767198 Msa0224810:intron 35.0%
GGCTTACTATCCTCAATAAA+TGG + chr2_1:74767200-74767219 Msa0224810:intron 35.0%
ACATGCTCTTCCATTTATTG+AGG - chr2_1:74767213-74767232 None:intergenic 35.0%
TTCTTCACTTCATTCAGCAA+AGG + chr2_1:74767424-74767443 Msa0224810:CDS 35.0%
!! GCACACTCTAAGATATTGTA+AGG - chr2_1:74767585-74767604 None:intergenic 35.0%
GAGAGAATCGCAAAATATAC+TGG + chr2_1:74767623-74767642 Msa0224810:CDS 35.0%
GCTAGAGTAAAAGAGAAATC+TGG - chr2_1:74767698-74767717 None:intergenic 35.0%
GGAAAGTTAATACCATCTGT+GGG - chr2_1:74767722-74767741 None:intergenic 35.0%
TGGAAAGTTAATACCATCTG+TGG - chr2_1:74767723-74767742 None:intergenic 35.0%
TCAACTACAACTTCGTTCTT+TGG - chr2_1:74767743-74767762 None:intergenic 35.0%
! AACATTGATGGCTTGCAAAA+TGG + chr2_1:74768028-74768047 Msa0224810:CDS 35.0%
! GCCTCACAAAGTGTTAATTT+CGG + chr2_1:74768061-74768080 Msa0224810:CDS 35.0%
TCCGAAATTAACACTTTGTG+AGG - chr2_1:74768065-74768084 None:intergenic 35.0%
!! GCTGTCTTATTTAATGCCTT+TGG + chr2_1:74768187-74768206 Msa0224810:CDS 35.0%
TGTATATATCAGGATCAGAG+GGG - chr2_1:74768243-74768262 None:intergenic 35.0%
GATCCTGATATATACATTGG+AGG + chr2_1:74768247-74768266 Msa0224810:CDS 35.0%
TCACCTCCAATGTATATATC+AGG - chr2_1:74768253-74768272 None:intergenic 35.0%
ACTGAGTCATGTATTGGAAA+AGG + chr2_1:74768428-74768447 Msa0224810:intron 35.0%
CTGAGTCATGTATTGGAAAA+GGG + chr2_1:74768429-74768448 Msa0224810:intron 35.0%
AAACACACCAAAAGAATCCT+AGG + chr2_1:74768461-74768480 Msa0224810:intron 35.0%
AACACACCAAAAGAATCCTA+GGG + chr2_1:74768462-74768481 Msa0224810:intron 35.0%
GAAATAGAGAGCAAATAAGG+TGG - chr2_1:74768546-74768565 None:intergenic 35.0%
GAGAGTTTGGATTGAGAAAA+GGG - chr2_1:74768709-74768728 None:intergenic 35.0%
TGAGAGTTTGGATTGAGAAA+AGG - chr2_1:74768710-74768729 None:intergenic 35.0%
TCCAAACTCTCAAATACTTG+TGG + chr2_1:74768718-74768737 Msa0224810:intron 35.0%
! TAGGAGTATATAGTCATTGC+TGG + chr2_1:74768890-74768909 Msa0224810:intron 35.0%
!! GCTGATTTCTGTTTTGCTTT+TGG + chr2_1:74769014-74769033 Msa0224810:intron 35.0%
!! ATTTTGGCCAAACAGTACTA+TGG + chr2_1:74769155-74769174 Msa0224810:CDS 35.0%
! CTCGCTGAATTTTTGAACAA+AGG - chr2_1:74769215-74769234 None:intergenic 35.0%
AAAATTCAGCGAGTCTGAAA+AGG + chr2_1:74769222-74769241 Msa0224810:CDS 35.0%
GCTTCTACTTTGAGTGAAAA+AGG - chr2_1:74769316-74769335 None:intergenic 35.0%
TTATATGATATCGGCATGAC+CGG + chr2_1:74769337-74769356 Msa0224810:CDS 35.0%
!! TGCAATTTGCTGTGGATATT+TGG + chr2_1:74769968-74769987 Msa0224810:CDS 35.0%
TGCAACTAAGTAGATAATCC+CGG + chr2_1:74770118-74770137 Msa0224810:intron 35.0%
AAAGCGATGAAAGTTTCTGT+TGG + chr2_1:74770195-74770214 Msa0224810:CDS 35.0%
AAGCGATGAAAGTTTCTGTT+GGG + chr2_1:74770196-74770215 Msa0224810:CDS 35.0%
GGAAGATTGACATTAACTTC+TGG + chr2_1:74770306-74770325 Msa0224810:CDS 35.0%
AAACTCACTTCGAAAACCAA+TGG + chr2_1:74770504-74770523 Msa0224810:CDS 35.0%
AATATCAAGAGCTTCTTCCA+AGG - chr2_1:74770553-74770572 None:intergenic 35.0%
! TTCAAACCAATGCCATTTGT+GGG + chr2_1:74770694-74770713 Msa0224810:CDS 35.0%
! GTACTGTGGCATGAAATTTT+CGG - chr2_1:74770944-74770963 None:intergenic 35.0%
GAAAATTTCATGCCACAGTA+CGG + chr2_1:74770943-74770962 Msa0224810:CDS 35.0%
GAGATCAATTGCAGAAAGAT+GGG - chr2_1:74771005-74771024 None:intergenic 35.0%
TGAGATCAATTGCAGAAAGA+TGG - chr2_1:74771006-74771025 None:intergenic 35.0%
GATCTGATTCTTTATTGTCC+AGG + chr2_1:74771027-74771046 Msa0224810:CDS 35.0%
! AAAACTATTTTCCCTCGTAG+TGG + chr2_1:74771076-74771095 Msa0224810:intron 35.0%
TACTGCATTCTTTGAGTGTA+CGG - chr2_1:74771181-74771200 None:intergenic 35.0%
!!! CTGTAGCAGCTATTTTTACT+TGG + chr2_1:74771220-74771239 Msa0224810:intron 35.0%
TTAGATATTTGTGAGGCGAA+GGG - chr2_1:74771264-74771283 None:intergenic 35.0%
TTTAGATATTTGTGAGGCGA+AGG - chr2_1:74771265-74771284 None:intergenic 35.0%
!!! GTCTGTTGCTAGTTTTATCT+GGG + chr2_1:74771557-74771576 Msa0224810:CDS 35.0%
TTGAAACTGATCCTTCTAGT+GGG - chr2_1:74771744-74771763 None:intergenic 35.0%
ATTGAAACTGATCCTTCTAG+TGG - chr2_1:74771745-74771764 None:intergenic 35.0%
AGTTACTGCCAAAAATAACC+AGG - chr2_1:74772258-74772277 None:intergenic 35.0%
TATTTGCACGACTATTTGAC+AGG + chr2_1:74772912-74772931 Msa0224810:intron 35.0%
ATTTGCACGACTATTTGACA+GGG + chr2_1:74772913-74772932 Msa0224810:intron 35.0%
TCTATGGTTGTAACTCTTAC+TGG + chr2_1:74773087-74773106 Msa0224810:three_prime_UTR 35.0%
TGAAACAATTTGTATGACCG+AGG + chr2_1:74773236-74773255 Msa0224810:three_prime_UTR 35.0%
!! ACAGAGAGTGCAGTGTTTTA+GGG - chr2_1:74762425-74762444 None:intergenic 40.0%
!! AACAGAGAGTGCAGTGTTTT+AGG - chr2_1:74762426-74762445 None:intergenic 40.0%
CAATCATCATCGATCAATGG+CGG + chr2_1:74762483-74762502 Msa0224810:exon 40.0%
AATGTGACGAGTCAATTGAG+TGG - chr2_1:74762512-74762531 None:intergenic 40.0%
TTGCAAGCTTGGATGCAATT+GGG + chr2_1:74762652-74762671 Msa0224810:CDS 40.0%
!! TGCGTATTGGTTGTGTAATG+TGG - chr2_1:74762949-74762968 None:intergenic 40.0%
CATGCGTATTTGTGTATGCA+TGG + chr2_1:74763105-74763124 Msa0224810:intron 40.0%
TCTACTGGGTAAACTTCTTC+AGG + chr2_1:74763155-74763174 Msa0224810:intron 40.0%
TGTACTTGTGTGGATGTGAA+AGG + chr2_1:74763254-74763273 Msa0224810:intron 40.0%
ACTATCTATATGGGCATACC+GGG + chr2_1:74763279-74763298 Msa0224810:intron 40.0%
TGCACAAATAGGCATGTGAA+TGG - chr2_1:74763358-74763377 None:intergenic 40.0%
TGGGTTCTTCAAGGAAAGAA+TGG + chr2_1:74763534-74763553 Msa0224810:CDS 40.0%
!! GATAAGGAGGAAAAGTGTTG+TGG + chr2_1:74764127-74764146 Msa0224810:CDS 40.0%
CACTTGCAGGTTCAATCTTT+AGG + chr2_1:74764200-74764219 Msa0224810:CDS 40.0%
!! AATCTTTAGGACTGCATGAC+AGG + chr2_1:74764213-74764232 Msa0224810:CDS 40.0%
CTTACATGAACTTAGAGGTG+GGG - chr2_1:74764550-74764569 None:intergenic 40.0%
GCTTACATGAACTTAGAGGT+GGG - chr2_1:74764551-74764570 None:intergenic 40.0%
AGCTTACATGAACTTAGAGG+TGG - chr2_1:74764552-74764571 None:intergenic 40.0%
TACCAACGAGGCAATTGAAT+CGG - chr2_1:74764663-74764682 None:intergenic 40.0%
ATACCATGGCACTAATCAAC+GGG - chr2_1:74764957-74764976 None:intergenic 40.0%
GATACCATGGCACTAATCAA+CGG - chr2_1:74764958-74764977 None:intergenic 40.0%
CTCAACATAGACAAGGTACA+TGG - chr2_1:74765019-74765038 None:intergenic 40.0%
CTTACAATCTGCAATCCCAA+AGG + chr2_1:74765448-74765467 Msa0224810:intron 40.0%
GCTTCATAAAACACGCCTTT+GGG - chr2_1:74765466-74765485 None:intergenic 40.0%
!! AAAGGCGTGTTTTATGAAGC+CGG + chr2_1:74765466-74765485 Msa0224810:intron 40.0%
!!! TAGGAGGAGGACCTTATTTT+TGG + chr2_1:74765604-74765623 Msa0224810:intron 40.0%
CGATTATATCCTGATCCATC+TGG + chr2_1:74765703-74765722 Msa0224810:CDS 40.0%
TTTCTTTACCAGCAAACCAG+TGG + chr2_1:74766100-74766119 Msa0224810:intron 40.0%
TTCTTTACCAGCAAACCAGT+GGG + chr2_1:74766101-74766120 Msa0224810:intron 40.0%
CTGAAAACCTCACAAAGTTC+CGG + chr2_1:74766480-74766499 Msa0224810:intron 40.0%
CGGAGATAGAAAGAAATTGC+TGG + chr2_1:74766500-74766519 Msa0224810:intron 40.0%
GAGAAGACAGAACATAGATG+GGG - chr2_1:74766619-74766638 None:intergenic 40.0%
CAAGACATGAAGTTCCATCA+GGG - chr2_1:74766657-74766676 None:intergenic 40.0%
!!! TGTGTTTTGGTGGAAGATAG+AGG + chr2_1:74766689-74766708 Msa0224810:intron 40.0%
!!! GTGTTTTGGTGGAAGATAGA+GGG + chr2_1:74766690-74766709 Msa0224810:intron 40.0%
!!! TGTTTTGGTGGAAGATAGAG+GGG + chr2_1:74766691-74766710 Msa0224810:intron 40.0%
GAATGCTACTCAGTATTGCA+TGG - chr2_1:74766722-74766741 None:intergenic 40.0%
CACCATATGAAACAAGTGTG+TGG - chr2_1:74766805-74766824 None:intergenic 40.0%
ATATGGTGTAGCGAGTAATC+TGG + chr2_1:74766817-74766836 Msa0224810:intron 40.0%
TATGGTGTAGCGAGTAATCT+GGG + chr2_1:74766818-74766837 Msa0224810:intron 40.0%
ATGTCACTCCTAAATCTAGG+TGG - chr2_1:74767020-74767039 None:intergenic 40.0%
GAAGCAGAATATGAGGAGAA+TGG - chr2_1:74767109-74767128 None:intergenic 40.0%
GGTAAAGGAAGCAGAATATG+AGG - chr2_1:74767116-74767135 None:intergenic 40.0%
AGAAGGAGAGGAATGACAAA+TGG - chr2_1:74767392-74767411 None:intergenic 40.0%
! GAAAGTTTCTGAAGAAGGAG+AGG - chr2_1:74767404-74767423 None:intergenic 40.0%
TCACTTCATTCAGCAAAGGT+TGG + chr2_1:74767428-74767447 Msa0224810:intron 40.0%
TGCATAGAAAACCAACACAC+AGG - chr2_1:74767550-74767569 None:intergenic 40.0%
CTCATAAGATGCAATGCTGT+TGG - chr2_1:74767855-74767874 None:intergenic 40.0%
!! ACTTTGAAACACAGCATTGC+AGG - chr2_1:74767966-74767985 None:intergenic 40.0%
! ATTGATGGCTTGCAAAATGG+CGG + chr2_1:74768031-74768050 Msa0224810:CDS 40.0%
! CTTGCAAAATGGCGGTATTT+TGG + chr2_1:74768039-74768058 Msa0224810:CDS 40.0%
CTCTGTATAGAACTACTCTC+AGG + chr2_1:74768094-74768113 Msa0224810:CDS 40.0%
GGAATTGGTTATTCTGTCTG+AGG + chr2_1:74768123-74768142 Msa0224810:CDS 40.0%
AGCTGAGGAACTATGAAGTA+TGG - chr2_1:74768170-74768189 None:intergenic 40.0%
GGCATTAAATAAGACAGCTG+AGG - chr2_1:74768185-74768204 None:intergenic 40.0%
TACAGCTAAGACTGAACCAA+AGG - chr2_1:74768206-74768225 None:intergenic 40.0%
! AGATTTTCCTGAGGTTGTCA+AGG + chr2_1:74768390-74768409 Msa0224810:intron 40.0%
GCTCAAACCAAATATACCCT+AGG - chr2_1:74768481-74768500 None:intergenic 40.0%
! ATCAGGCGTTAGGATTCTTT+TGG + chr2_1:74768666-74768685 Msa0224810:intron 40.0%
GCCACAAGTATTTGAGAGTT+TGG - chr2_1:74768722-74768741 None:intergenic 40.0%
!! TTGGTGCTGATATACAGTGA+AGG + chr2_1:74769033-74769052 Msa0224810:intron 40.0%
!! TGGTGCTGATATACAGTGAA+GGG + chr2_1:74769034-74769053 Msa0224810:intron 40.0%
TGGCATTCCATAGTACTGTT+TGG - chr2_1:74769165-74769184 None:intergenic 40.0%
GCTTACAATTCTTCAAGCGA+TGG + chr2_1:74769372-74769391 Msa0224810:CDS 40.0%
ACAATTCTTCAAGCGATGGA+AGG + chr2_1:74769376-74769395 Msa0224810:CDS 40.0%
TACACAGACCTCGGATAAAT+TGG - chr2_1:74769413-74769432 None:intergenic 40.0%
ATCATCTTATCTGTCGTCCA+AGG + chr2_1:74769451-74769470 Msa0224810:intron 40.0%
TGACATATTCCATGATGCCT+TGG - chr2_1:74769471-74769490 None:intergenic 40.0%
AACCAAGTATCCCACTAAGT+GGG - chr2_1:74769571-74769590 None:intergenic 40.0%
TTAGTGGGATACTTGGTTGT+TGG + chr2_1:74769573-74769592 Msa0224810:intron 40.0%
! TGAAACTGCTGTTCAGCTTT+TGG + chr2_1:74769683-74769702 Msa0224810:CDS 40.0%
ATTCTTGCAAGCTACTTCCA+TGG + chr2_1:74769712-74769731 Msa0224810:CDS 40.0%
!! GCTCTGAAAACTGAATACCA+TGG - chr2_1:74769732-74769751 None:intergenic 40.0%
AATCCATGCAATTTCCTGCT+TGG - chr2_1:74769996-74770015 None:intergenic 40.0%
ACATTTCCCCTAAGGATGAA+GGG + chr2_1:74770337-74770356 Msa0224810:CDS 40.0%
! AAAGTACCCCTTCATCCTTA+GGG - chr2_1:74770347-74770366 None:intergenic 40.0%
!! AAAAGTACCCCTTCATCCTT+AGG - chr2_1:74770348-74770367 None:intergenic 40.0%
TGCAGAAGCCCTCTTATATT+TGG - chr2_1:74770417-74770436 None:intergenic 40.0%
GAAGTCTGATGAACTTACCT+TGG + chr2_1:74770533-74770552 Msa0224810:CDS 40.0%
! CTTCAAACCAATGCCATTTG+TGG + chr2_1:74770693-74770712 Msa0224810:CDS 40.0%
TCAAGTGAGCCTTCAACTAA+AGG - chr2_1:74770828-74770847 None:intergenic 40.0%
AAGAACATGAAAAGCTTCCG+TGG - chr2_1:74770895-74770914 None:intergenic 40.0%
TGTACGGAGACTTAAGACAA+TGG - chr2_1:74771165-74771184 None:intergenic 40.0%
!!! GGTCTGTTGCTAGTTTTATC+TGG + chr2_1:74771556-74771575 Msa0224810:CDS 40.0%
GGGATGTTGACAGAGAAAAA+TGG + chr2_1:74771577-74771596 Msa0224810:CDS 40.0%
TGAAACTGATCCTTCTAGTG+GGG - chr2_1:74771743-74771762 None:intergenic 40.0%
CATCCGTTGCTAGATTACTA+TGG + chr2_1:74771798-74771817 Msa0224810:intron 40.0%
GCACCATAGTAATCTAGCAA+CGG - chr2_1:74771804-74771823 None:intergenic 40.0%
AATACTAGTGTGTTCCTTGC+TGG + chr2_1:74771841-74771860 Msa0224810:intron 40.0%
CAATGGTCTAACTAAGCTTG+TGG + chr2_1:74772058-74772077 Msa0224810:CDS 40.0%
AGTCTGATACCGTCTTATGA+GGG - chr2_1:74772088-74772107 None:intergenic 40.0%
AAGTCTGATACCGTCTTATG+AGG - chr2_1:74772089-74772108 None:intergenic 40.0%
! TTGCTGTTCTGAGCTACATT+AGG + chr2_1:74772210-74772229 Msa0224810:intron 40.0%
! TGCTGTTCTGAGCTACATTA+GGG + chr2_1:74772211-74772230 Msa0224810:intron 40.0%
ACATTAGGGCCAGAAAAACA+TGG + chr2_1:74772225-74772244 Msa0224810:intron 40.0%
!! GCTGAACTCCTGGTTATTTT+TGG + chr2_1:74772247-74772266 Msa0224810:intron 40.0%
AAGCTGCTTCAAAAGAGCTT+AGG + chr2_1:74772311-74772330 Msa0224810:intron 40.0%
TATCTATCCGTTGAGAACAC+AGG + chr2_1:74772544-74772563 Msa0224810:CDS 40.0%
TGACAAACCTGTGTTCTCAA+CGG - chr2_1:74772554-74772573 None:intergenic 40.0%
GTCAGTACTTCAGAATTTCC+AGG + chr2_1:74772834-74772853 Msa0224810:intron 40.0%
GTTTCCAATAGCTTGGAATC+GGG - chr2_1:74772990-74773009 None:intergenic 40.0%
CGTTTCCAATAGCTTGGAAT+CGG - chr2_1:74772991-74773010 None:intergenic 40.0%
CAGAATCGTTTCCAATAGCT+TGG - chr2_1:74772997-74773016 None:intergenic 40.0%
AACAATTTGTATGACCGAGG+TGG + chr2_1:74773239-74773258 Msa0224810:three_prime_UTR 40.0%
AGTTGAAGAGGAGTCAACGT+AGG - chr2_1:74762539-74762558 None:intergenic 45.0%
TGTATTGCAGGTTGCAAGCT+TGG + chr2_1:74762641-74762660 Msa0224810:intron 45.0%
GTTGCAAGCTTGGATGCAAT+TGG + chr2_1:74762651-74762670 Msa0224810:CDS 45.0%
TGTACTTGTATGCATGTGGG+CGG + chr2_1:74763032-74763051 Msa0224810:intron 45.0%
!! TGAGCAGGATTTGCTATACC+CGG - chr2_1:74763300-74763319 None:intergenic 45.0%
AGGAATTCTTCTTCTGGCAG+AGG + chr2_1:74763456-74763475 Msa0224810:intron 45.0%
TAGCTTGGTTGGGTTCTTCA+AGG + chr2_1:74763525-74763544 Msa0224810:CDS 45.0%
!! TTGGTTGCTTGGCACTGATA+AGG + chr2_1:74764111-74764130 Msa0224810:CDS 45.0%
!! GAGGAAAAGTGTTGTGGGTA+CGG + chr2_1:74764133-74764152 Msa0224810:CDS 45.0%
! AAGTGTTGTGGGTACGGTAA+CGG + chr2_1:74764139-74764158 Msa0224810:CDS 45.0%
! TTTAGGACTGCATGACAGGA+AGG + chr2_1:74764217-74764236 Msa0224810:CDS 45.0%
AATCGGCATGATGTTCTAGC+AGG - chr2_1:74764646-74764665 None:intergenic 45.0%
AAGCAACTATAGGCTGGACT+GGG + chr2_1:74764921-74764940 Msa0224810:intron 45.0%
GGCTTCATAAAACACGCCTT+TGG - chr2_1:74765467-74765486 None:intergenic 45.0%
GTTCTTGACTCTCTTGTAGG+AGG + chr2_1:74765588-74765607 Msa0224810:intron 45.0%
AAGCTTGCAAGTAGACCAGA+TGG - chr2_1:74765721-74765740 None:intergenic 45.0%
AGCCACATAGGTGGAAAACA+GGG - chr2_1:74765932-74765951 None:intergenic 45.0%
TAGCCACATAGGTGGAAAAC+AGG - chr2_1:74765933-74765952 None:intergenic 45.0%
AAATGGCATAGCCACATAGG+TGG - chr2_1:74765941-74765960 None:intergenic 45.0%
TCTTTACCAGCAAACCAGTG+GGG + chr2_1:74766102-74766121 Msa0224810:intron 45.0%
TGCAACGAGATGACCTATCA+AGG + chr2_1:74766134-74766153 Msa0224810:CDS 45.0%
TGACCTATCAAGGACTCTGA+TGG + chr2_1:74766144-74766163 Msa0224810:CDS 45.0%
GTACCATCAGAGTCCTTGAT+AGG - chr2_1:74766150-74766169 None:intergenic 45.0%
ACGATTAGAGCAGAACAGTC+AGG + chr2_1:74766377-74766396 Msa0224810:intron 45.0%
CAGTCAGGATACGAAGTAGA+AGG + chr2_1:74766392-74766411 Msa0224810:intron 45.0%
TCTATCTCCGGAACTTTGTG+AGG - chr2_1:74766490-74766509 None:intergenic 45.0%
!! TTCGAAGTGCTTTTCCCTGA+TGG + chr2_1:74766640-74766659 Msa0224810:intron 45.0%
CCAAGACATGAAGTTCCATC+AGG - chr2_1:74766658-74766677 None:intergenic 45.0%
CCTGATGGAACTTCATGTCT+TGG + chr2_1:74766655-74766674 Msa0224810:intron 45.0%
!! GTTTTGGTGGAAGATAGAGG+GGG + chr2_1:74766692-74766711 Msa0224810:intron 45.0%
! TTTTGGTGGAAGATAGAGGG+GGG + chr2_1:74766693-74766712 Msa0224810:intron 45.0%
CTAAATCTAGGTGGTGCAGA+AGG - chr2_1:74767011-74767030 None:intergenic 45.0%
CTTCTGCACCACCTAGATTT+AGG + chr2_1:74767009-74767028 Msa0224810:intron 45.0%
GATTCTCTCTGCTCCATACT+TGG - chr2_1:74767612-74767631 None:intergenic 45.0%
TTTACTCTAGCACCCACAGA+TGG + chr2_1:74767707-74767726 Msa0224810:CDS 45.0%
TGAAACACAGCATTGCAGGA+AGG - chr2_1:74767962-74767981 None:intergenic 45.0%
TAGAACTACTCTCAGGATGC+AGG + chr2_1:74768101-74768120 Msa0224810:CDS 45.0%
AGAACTACTCTCAGGATGCA+GGG + chr2_1:74768102-74768121 Msa0224810:CDS 45.0%
!! CCTAACGCCTGATTGATTTG+AGG - chr2_1:74768659-74768678 None:intergenic 45.0%
CCTCAAATCAATCAGGCGTT+AGG + chr2_1:74768656-74768675 Msa0224810:intron 45.0%
!! ATAGTCATTGCTGGTTCCAG+AGG + chr2_1:74768899-74768918 Msa0224810:intron 45.0%
!! TAGTCATTGCTGGTTCCAGA+GGG + chr2_1:74768900-74768919 Msa0224810:intron 45.0%
! TCTAATTTGGTGGTTCCCTC+TGG - chr2_1:74768918-74768937 None:intergenic 45.0%
CAGAAATCAGCGATGTGTCT+TGG - chr2_1:74769005-74769024 None:intergenic 45.0%
!!! TGGGCTTATTTTGTCACTGC+CGG + chr2_1:74769511-74769530 Msa0224810:intron 45.0%
ACCAAGTATCCCACTAAGTG+GGG - chr2_1:74769570-74769589 None:intergenic 45.0%
CAACCAAGTATCCCACTAAG+TGG - chr2_1:74769572-74769591 None:intergenic 45.0%
ATGGGCAGGATCCTTGAAAA+TGG + chr2_1:74769925-74769944 Msa0224810:intron 45.0%
!! TTTCGTGGTGCAATTTGCTG+TGG + chr2_1:74769960-74769979 Msa0224810:CDS 45.0%
! GTGGATATTTGGAACCAAGC+AGG + chr2_1:74769979-74769998 Msa0224810:CDS 45.0%
GAACCAAGCAGGAAATTGCA+TGG + chr2_1:74769990-74770009 Msa0224810:CDS 45.0%
GACATTTCCCCTAAGGATGA+AGG + chr2_1:74770336-74770355 Msa0224810:CDS 45.0%
CATTTCCCCTAAGGATGAAG+GGG + chr2_1:74770338-74770357 Msa0224810:CDS 45.0%
AAGTACCCCTTCATCCTTAG+GGG - chr2_1:74770346-74770365 None:intergenic 45.0%
ATCAGACTTCTCTGCACCAT+TGG - chr2_1:74770523-74770542 None:intergenic 45.0%
AATCCATGAGAGCCCACAAA+TGG - chr2_1:74770709-74770728 None:intergenic 45.0%
ATTTGTGGGCTCTCATGGAT+TGG + chr2_1:74770708-74770727 Msa0224810:CDS 45.0%
ACTTCCGTGCCTTTAGTTGA+AGG + chr2_1:74770816-74770835 Msa0224810:CDS 45.0%
TGAGCCTTCAACTAAAGGCA+CGG - chr2_1:74770823-74770842 None:intergenic 45.0%
AGAGCAGAAATGTGATCCTC+TGG + chr2_1:74770857-74770876 Msa0224810:CDS 45.0%
AGAAATGTGATCCTCTGGCA+AGG + chr2_1:74770862-74770881 Msa0224810:CDS 45.0%
CTTATATAGAGGCCGTACTG+TGG - chr2_1:74770958-74770977 None:intergenic 45.0%
TACGGCCTCTATATAAGCAG+AGG + chr2_1:74770961-74770980 Msa0224810:CDS 45.0%
TTGCAGAAAGATGGGCATCA+TGG - chr2_1:74770997-74771016 None:intergenic 45.0%
AGAGCGCATTACATCTTACC+TGG - chr2_1:74771048-74771067 None:intergenic 45.0%
ACTCACAAATGCCACTACGA+GGG - chr2_1:74771090-74771109 None:intergenic 45.0%
TACTCACAAATGCCACTACG+AGG - chr2_1:74771091-74771110 None:intergenic 45.0%
GTCAGACATGACATGTGCAA+AGG - chr2_1:74771326-74771345 None:intergenic 45.0%
GACAAGCAATCCAGAAGAAC+TGG - chr2_1:74771496-74771515 None:intergenic 45.0%
GGCTCAGTTTCTTTCACACA+AGG - chr2_1:74771722-74771741 None:intergenic 45.0%
TAATCTAGCAACGGATGCAG+TGG - chr2_1:74771795-74771814 None:intergenic 45.0%
ACGTAAACCATGTTGCATGC+AGG + chr2_1:74771999-74772018 Msa0224810:intron 45.0%
TTCTTGTCCTGCATGCAACA+TGG - chr2_1:74772009-74772028 None:intergenic 45.0%
! TGTGGACTACCCTCATAAGA+CGG + chr2_1:74772076-74772095 Msa0224810:CDS 45.0%
! GGAGTTCAGCCATGTTTTTC+TGG - chr2_1:74772237-74772256 None:intergenic 45.0%
GAAAAACATGGCTGAACTCC+TGG + chr2_1:74772237-74772256 Msa0224810:intron 45.0%
AACGGATAGATACGCACATG+AGG - chr2_1:74772536-74772555 None:intergenic 45.0%
GCAATGAAGCTGTCAAATGC+CGG + chr2_1:74772803-74772822 Msa0224810:CDS 45.0%
GAAACGAAGACTCCTAGATG+AGG - chr2_1:74772948-74772967 None:intergenic 45.0%
!!! TTTTTAAGTTATTTTTTTTT+TGG + chr2_1:74763598-74763617 Msa0224810:intron 5.0%
!!! AGTTTTTTTTTTAAAAAAAA+AGG - chr2_1:74767511-74767530 None:intergenic 5.0%
CTGGTGAGATGGAGTTGAAG+AGG - chr2_1:74762551-74762570 None:intergenic 50.0%
CTCTTCAACTCCATCTCACC+AGG + chr2_1:74762549-74762568 Msa0224810:CDS 50.0%
GTACTTGTATGCATGTGGGC+GGG + chr2_1:74763033-74763052 Msa0224810:intron 50.0%
AGTATCACAGCGCACAGACT+TGG - chr2_1:74763794-74763813 None:intergenic 50.0%
GCAGATTGGAAAGCAGTACG+AGG + chr2_1:74764080-74764099 Msa0224810:CDS 50.0%
!! GTTGCTTGGCACTGATAAGG+AGG + chr2_1:74764114-74764133 Msa0224810:CDS 50.0%
AGTGTTGTGGGTACGGTAAC+GGG + chr2_1:74764140-74764159 Msa0224810:CDS 50.0%
ATGAACTTAGAGGTGGGGAG+AGG - chr2_1:74764545-74764564 None:intergenic 50.0%
!! TGCCGATTCAATTGCCTCGT+TGG + chr2_1:74764658-74764677 Msa0224810:CDS 50.0%
GGAAGTAAGGACTACCAACG+AGG - chr2_1:74764675-74764694 None:intergenic 50.0%
AAGCCTGAGGGAAAAGGGAA+TGG - chr2_1:74764801-74764820 None:intergenic 50.0%
AGTGGAAGCCTGAGGGAAAA+GGG - chr2_1:74764806-74764825 None:intergenic 50.0%
AAGTGGAAGCCTGAGGGAAA+AGG - chr2_1:74764807-74764826 None:intergenic 50.0%
GAAGCAACTATAGGCTGGAC+TGG + chr2_1:74764920-74764939 Msa0224810:intron 50.0%
! TAGCCCGTTGATTAGTGCCA+TGG + chr2_1:74764951-74764970 Msa0224810:intron 50.0%
GTGTCACAGAGAGCCATAAG+CGG - chr2_1:74765523-74765542 None:intergenic 50.0%
CTTATGGCTCTCTGTGACAC+CGG + chr2_1:74765523-74765542 Msa0224810:intron 50.0%
CTTGACTCTCTTGTAGGAGG+AGG + chr2_1:74765591-74765610 Msa0224810:intron 50.0%
GCAAGTAGACCAGATGGATC+AGG - chr2_1:74765715-74765734 None:intergenic 50.0%
! CTCCCTGTTTTCCACCTATG+TGG + chr2_1:74765927-74765946 Msa0224810:intron 50.0%
TTGCACATGAGTATCCCCAC+TGG - chr2_1:74766119-74766138 None:intergenic 50.0%
TCAAGGACTCTGATGGTACG+TGG + chr2_1:74766151-74766170 Msa0224810:intron 50.0%
TTTGGTGGAAGATAGAGGGG+GGG + chr2_1:74766694-74766713 Msa0224810:intron 50.0%
AGAGTGTGCTCCTCCAAGTA+TGG + chr2_1:74767596-74767615 Msa0224810:CDS 50.0%
TCTCTCTGCTCCATACTTGG+AGG - chr2_1:74767609-74767628 None:intergenic 50.0%
CGCAATAAGCTGCTGAAGCA+GGG - chr2_1:74767774-74767793 None:intergenic 50.0%
GCAGGAAGGAATGGAAGTCT+TGG - chr2_1:74767948-74767967 None:intergenic 50.0%
CACAGCATTGCAGGAAGGAA+TGG - chr2_1:74767957-74767976 None:intergenic 50.0%
ACTCTCAGGATGCAGGGAAT+TGG + chr2_1:74768108-74768127 Msa0224810:CDS 50.0%
GTCTTCTCCTTGACAACCTC+AGG - chr2_1:74768400-74768419 None:intergenic 50.0%
! ATCTGTCGTCCAAGGCATCA+TGG + chr2_1:74769459-74769478 Msa0224810:intron 50.0%
TGAAGTCGACCCCACTTAGT+GGG + chr2_1:74769558-74769577 Msa0224810:intron 50.0%
ACCCCACTTAGTGGGATACT+TGG + chr2_1:74769566-74769585 Msa0224810:intron 50.0%
GGCAGGATCCTTGAAAATGG+AGG + chr2_1:74769928-74769947 Msa0224810:intron 50.0%
! CCTCTGCACCTCCATTTTCA+AGG - chr2_1:74769939-74769958 None:intergenic 50.0%
! CCTTGAAAATGGAGGTGCAG+AGG + chr2_1:74769936-74769955 Msa0224810:CDS 50.0%
GTAGACTCTGCAGAACAAGC+AGG - chr2_1:74770161-74770180 None:intergenic 50.0%
TGGAACAACACCCTTGAGGA+GGG - chr2_1:74770454-74770473 None:intergenic 50.0%
CAACTGGAACAACACCCTTG+AGG - chr2_1:74770458-74770477 None:intergenic 50.0%
TGTTCCAGTTGCACAGGCTT+TGG + chr2_1:74770467-74770486 Msa0224810:CDS 50.0%
GTTCCAGTTGCACAGGCTTT+GGG + chr2_1:74770468-74770487 Msa0224810:CDS 50.0%
TGAGAGCCCACAAATGGCAT+TGG - chr2_1:74770703-74770722 None:intergenic 50.0%
! ATGCCATTTGTGGGCTCTCA+TGG + chr2_1:74770703-74770722 Msa0224810:CDS 50.0%
!! GGGCTCTCATGGATTGGAAA+AGG + chr2_1:74770714-74770733 Msa0224810:CDS 50.0%
!! GGAAAAGGTTTGCTGTTGCG+TGG + chr2_1:74770729-74770748 Msa0224810:CDS 50.0%
TCTGGCAAGGAAATGTGCCA+CGG + chr2_1:74770875-74770894 Msa0224810:CDS 50.0%
GCAGCTCATACCAGTTCTTC+TGG + chr2_1:74771483-74771502 Msa0224810:intron 50.0%
AGAAACTGAGCCCCACTAGA+AGG + chr2_1:74771730-74771749 Msa0224810:intron 50.0%
!! AAGTATCGAGTGTGCCAGCA+AGG - chr2_1:74771858-74771877 None:intergenic 50.0%
!! GAAGTACTGACCATGCTTGC+CGG - chr2_1:74772825-74772844 None:intergenic 50.0%
ATAGCTTGGAATCGGGTAGC+TGG - chr2_1:74772983-74773002 None:intergenic 50.0%
GCTACCCGATTCCAAGCTAT+TGG + chr2_1:74772983-74773002 Msa0224810:three_prime_UTR 50.0%
TTCCACGCTTTCATCCACCT+CGG - chr2_1:74773256-74773275 None:intergenic 50.0%
TGGGAGTGAACCTGGTGAGA+TGG - chr2_1:74762562-74762581 None:intergenic 55.0%
! GCACCATTCCCTTTTCCCTC+AGG + chr2_1:74764795-74764814 Msa0224810:intron 55.0%
ACAGGGAAGTGGAAGCCTGA+GGG - chr2_1:74764813-74764832 None:intergenic 55.0%
AACAGGGAAGTGGAAGCCTG+AGG - chr2_1:74764814-74764833 None:intergenic 55.0%
!! GAGTATCCCCACTGGTTTGC+TGG - chr2_1:74766111-74766130 None:intergenic 55.0%
GCGCAATAAGCTGCTGAAGC+AGG - chr2_1:74767775-74767794 None:intergenic 55.0%
GTGAAGTCGACCCCACTTAG+TGG + chr2_1:74769557-74769576 Msa0224810:intron 55.0%
! TGGAGGTGCAGAGGATTTCG+TGG + chr2_1:74769945-74769964 Msa0224810:CDS 55.0%
CTGGAACAACACCCTTGAGG+AGG - chr2_1:74770455-74770474 None:intergenic 55.0%
!! GGGTGTTGTTCCAGTTGCAC+AGG + chr2_1:74770461-74770480 Msa0224810:CDS 55.0%
GTGGCACATTTCCTTGCCAG+AGG - chr2_1:74770876-74770895 None:intergenic 55.0%
TCTCCCGAACAAGCTGCACA+GGG - chr2_1:74772478-74772497 None:intergenic 55.0%
CTGTCAAATGCCGGCAAGCA+TGG + chr2_1:74772812-74772831 Msa0224810:CDS 55.0%
!! GGGCATCGATTGCCTCATCT+AGG + chr2_1:74772933-74772952 Msa0224810:intron 55.0%
ATTGGGGGTGGGAGTGAACC+TGG - chr2_1:74762570-74762589 None:intergenic 60.0%
CTTGTATGCATGTGGGCGGG+TGG + chr2_1:74763036-74763055 Msa0224810:intron 60.0%
! AGGTGCGCTCGTTGGTTGCT+TGG + chr2_1:74764100-74764119 Msa0224810:CDS 60.0%
TGGCTCTCTGTGACACCGGT+AGG + chr2_1:74765527-74765546 Msa0224810:intron 60.0%
GGCTCTCTGTGACACCGGTA+GGG + chr2_1:74765528-74765547 Msa0224810:intron 60.0%
GAGCCCAAAGCCTGTGCAAC+TGG - chr2_1:74770474-74770493 None:intergenic 60.0%
! CTCCCCCTGTGCAGCTTGTT+CGG + chr2_1:74772471-74772490 Msa0224810:intron 60.0%
! TCCCCCTGTGCAGCTTGTTC+GGG + chr2_1:74772472-74772491 Msa0224810:intron 60.0%
TCCCGAACAAGCTGCACAGG+GGG - chr2_1:74772476-74772495 None:intergenic 60.0%
CTCCCGAACAAGCTGCACAG+GGG - chr2_1:74772477-74772496 None:intergenic 60.0%
GTCTCCCGAACAAGCTGCAC+AGG - chr2_1:74772479-74772498 None:intergenic 60.0%
GACCGAGGTGGATGAAAGCG+TGG + chr2_1:74773251-74773270 Msa0224810:three_prime_UTR 60.0%
GCAGTACGAGGTGCGCTCGT+TGG + chr2_1:74764092-74764111 Msa0224810:CDS 65.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 74762380 74773301 74762380 ID=Msa0224810;Name=Msa0224810
chr2_1 mRNA 74762380 74773301 74762380 ID=Msa0224810-mRNA-1;Parent=Msa0224810;Name=Msa0224810-mRNA-1;_AED=0.08;_eAED=0.08;_QI=119|1|1|1|1|1|20|331|1140
chr2_1 exon 74762380 74762570 74762380 ID=Msa0224810-mRNA-1:exon:22199;Parent=Msa0224810-mRNA-1
chr2_1 exon 74762651 74762713 74762651 ID=Msa0224810-mRNA-1:exon:22200;Parent=Msa0224810-mRNA-1
chr2_1 exon 74762843 74762897 74762843 ID=Msa0224810-mRNA-1:exon:22201;Parent=Msa0224810-mRNA-1
chr2_1 exon 74763458 74763555 74763458 ID=Msa0224810-mRNA-1:exon:22202;Parent=Msa0224810-mRNA-1
chr2_1 exon 74764080 74764238 74764080 ID=Msa0224810-mRNA-1:exon:22203;Parent=Msa0224810-mRNA-1
chr2_1 exon 74764620 74764679 74764620 ID=Msa0224810-mRNA-1:exon:22204;Parent=Msa0224810-mRNA-1
chr2_1 exon 74765607 74765795 74765607 ID=Msa0224810-mRNA-1:exon:22205;Parent=Msa0224810-mRNA-1
chr2_1 exon 74766112 74766165 74766112 ID=Msa0224810-mRNA-1:exon:22206;Parent=Msa0224810-mRNA-1
chr2_1 exon 74767359 74767445 74767359 ID=Msa0224810-mRNA-1:exon:22207;Parent=Msa0224810-mRNA-1
chr2_1 exon 74767575 74768268 74767575 ID=Msa0224810-mRNA-1:exon:22208;Parent=Msa0224810-mRNA-1
chr2_1 exon 74769050 74769423 74769050 ID=Msa0224810-mRNA-1:exon:22209;Parent=Msa0224810-mRNA-1
chr2_1 exon 74769660 74769733 74769660 ID=Msa0224810-mRNA-1:exon:22210;Parent=Msa0224810-mRNA-1
chr2_1 exon 74769933 74770038 74769933 ID=Msa0224810-mRNA-1:exon:22211;Parent=Msa0224810-mRNA-1
chr2_1 exon 74770174 74771048 74770174 ID=Msa0224810-mRNA-1:exon:22212;Parent=Msa0224810-mRNA-1
chr2_1 exon 74771306 74771381 74771306 ID=Msa0224810-mRNA-1:exon:22213;Parent=Msa0224810-mRNA-1
chr2_1 exon 74771487 74771598 74771487 ID=Msa0224810-mRNA-1:exon:22214;Parent=Msa0224810-mRNA-1
chr2_1 exon 74772021 74772097 74772021 ID=Msa0224810-mRNA-1:exon:22215;Parent=Msa0224810-mRNA-1
chr2_1 exon 74772485 74772565 74772485 ID=Msa0224810-mRNA-1:exon:22216;Parent=Msa0224810-mRNA-1
chr2_1 exon 74772754 74772833 74772754 ID=Msa0224810-mRNA-1:exon:22217;Parent=Msa0224810-mRNA-1
chr2_1 exon 74772934 74773301 74772934 ID=Msa0224810-mRNA-1:exon:22218;Parent=Msa0224810-mRNA-1
chr2_1 five_prime_UTR 74762380 74762498 74762380 ID=Msa0224810-mRNA-1:five_prime_utr;Parent=Msa0224810-mRNA-1
chr2_1 CDS 74762499 74762570 74762499 ID=Msa0224810-mRNA-1:cds;Parent=Msa0224810-mRNA-1
chr2_1 CDS 74762651 74762713 74762651 ID=Msa0224810-mRNA-1:cds;Parent=Msa0224810-mRNA-1
chr2_1 CDS 74762843 74762897 74762843 ID=Msa0224810-mRNA-1:cds;Parent=Msa0224810-mRNA-1
chr2_1 CDS 74763458 74763555 74763458 ID=Msa0224810-mRNA-1:cds;Parent=Msa0224810-mRNA-1
chr2_1 CDS 74764080 74764238 74764080 ID=Msa0224810-mRNA-1:cds;Parent=Msa0224810-mRNA-1
chr2_1 CDS 74764620 74764679 74764620 ID=Msa0224810-mRNA-1:cds;Parent=Msa0224810-mRNA-1
chr2_1 CDS 74765607 74765795 74765607 ID=Msa0224810-mRNA-1:cds;Parent=Msa0224810-mRNA-1
chr2_1 CDS 74766112 74766165 74766112 ID=Msa0224810-mRNA-1:cds;Parent=Msa0224810-mRNA-1
chr2_1 CDS 74767359 74767445 74767359 ID=Msa0224810-mRNA-1:cds;Parent=Msa0224810-mRNA-1
chr2_1 CDS 74767575 74768268 74767575 ID=Msa0224810-mRNA-1:cds;Parent=Msa0224810-mRNA-1
chr2_1 CDS 74769050 74769423 74769050 ID=Msa0224810-mRNA-1:cds;Parent=Msa0224810-mRNA-1
chr2_1 CDS 74769660 74769733 74769660 ID=Msa0224810-mRNA-1:cds;Parent=Msa0224810-mRNA-1
chr2_1 CDS 74769933 74770038 74769933 ID=Msa0224810-mRNA-1:cds;Parent=Msa0224810-mRNA-1
chr2_1 CDS 74770174 74771048 74770174 ID=Msa0224810-mRNA-1:cds;Parent=Msa0224810-mRNA-1
chr2_1 CDS 74771306 74771381 74771306 ID=Msa0224810-mRNA-1:cds;Parent=Msa0224810-mRNA-1
chr2_1 CDS 74771487 74771598 74771487 ID=Msa0224810-mRNA-1:cds;Parent=Msa0224810-mRNA-1
chr2_1 CDS 74772021 74772097 74772021 ID=Msa0224810-mRNA-1:cds;Parent=Msa0224810-mRNA-1
chr2_1 CDS 74772485 74772565 74772485 ID=Msa0224810-mRNA-1:cds;Parent=Msa0224810-mRNA-1
chr2_1 CDS 74772754 74772833 74772754 ID=Msa0224810-mRNA-1:cds;Parent=Msa0224810-mRNA-1
chr2_1 CDS 74772934 74772970 74772934 ID=Msa0224810-mRNA-1:cds;Parent=Msa0224810-mRNA-1
chr2_1 three_prime_UTR 74772971 74773301 74772971 ID=Msa0224810-mRNA-1:three_prime_utr;Parent=Msa0224810-mRNA-1
Gene Sequence

>Msa0224810

ATGGCGGAAACCACTCAATTGACTCGTCACATTGAGTCCTACGTTGACTCCTCTTCAACTCCATCTCACCAGGTTGCAAGCTTGGATGCAATTGGGTTATTGATAAAGACCAATGCTTTAACTCTAGAAGCACTTGTTAGAGAGTTGGATATGTATTTGACTTCAACAGATACAGTTATTCGATCAAGAGGAATTCTTCTTCTGGCAGAGGTGCTTACTCGTATTAACTCAATATCTCTAGACAGTAAAACTATACATAGCTTGGTTGGGTTCTTCAAGGAAAGAATGGCAGATTGGAAAGCAGTACGAGGTGCGCTCGTTGGTTGCTTGGCACTGATAAGGAGGAAAAGTGTTGTGGGTACGGTAACGGGTAGTGATGCCAAATCCATTACTCAATCTTTTCTACAACACTTGCAGGTTCAATCTTTAGGACTGCATGACAGGAAGCTATGCTTTGAACTGCTTGATTACCTGCTAGAACATCATGCCGATTCAATTGCCTCGTTGGAGGAGGACCTTATTTTTGGAATTTGTGAAGCCATAGATGCAGAAAAAGATCCAGAATGTTTAATGCTTGCTTTTCATATTGTCGAGTCTTTGGCACGATTATATCCTGATCCATCTGGTCTACTTGCAAGCTTTGCTAGAGATGTTTTTGATCTTTTAGAACCTTACTTTCCGATTCACTTTACACATCAAACCAGTGGGGATACTCATGTGCAACGAGATGACCTATCAAGGACTCTGATGTCTGCATTCGCTTCTACACCCGTTTTTGAGCCATTTGTCATTCCTCTCCTTCTTCAGAAACTTTCTTCTTCACTTCATTCAGCAAAGATTGATTCCTTACAATATCTTAGAGTGTGCTCCTCCAAGTATGGAGCAGAGAGAATCGCAAAATATACTGGAGCTATTTGGTCTTCATTAAAAGACACTTTATATACTTATTTGGGGGAGCCAGATTTCTCTTTTACTCTAGCACCCACAGATGGTATTAACTTTCCAAAGAACGAAGTTGTAGTTGAAGCTCTCTCCCTGCTTCAGCAGCTTATTGCGCAAAATAGTAGTCAGTTAGTTAGCTTGATAATTGATGATGAGGATGTCAACTTCATTACCAACAGCATTGCATCTTATGAGATGTACGACACTATTTCTGTGCAAGAAAAGAAGAAACTACATGCTATTGGTCGCATTTTATATATTTCTGCCAAGACTTCCATTCCTTCCTGCAATGCTGTGTTTCAAAGTTTTTTCTTAAGAATGATGGATAAATTGGGATTTTCTGTTAGCAACATTGATGGCTTGCAAAATGGCGGTATTTTGGCCTCACAAAGTGTTAATTTCGGATTCCTTTATCTCTGTATAGAACTACTCTCAGGATGCAGGGAATTGGTTATTCTGTCTGAGGAAAAGCATGAGACATATTGCTCCATACTTCATAGTTCCTCAGCTGTCTTATTTAATGCCTTTGGTTCAGTCTTAGCTGTAACTGCTGACAGATGCCCCTCTGATCCTGATATATACATTGGAGTGAAGGGCTTGCAGATTCTAGCAATGTTTCATTTAGATGTTTTTCCAATACCAAAATCAACATTTGAGAATATTTTGAAGAAATTCATGTCAATTATCATAGAAGATTTTGGCCAAACAGTACTATGGAATGCCACATTGAAAGCATTATTTCATATTGGCTCCTTTGTTCAAAAATTCAGCGAGTCTGAAAAGGCTATGAGCTACAAGAGTTTTGTTGTAGACAAAATTATGGAAATGCTGTCTCTTGATGATATTGTTCTGCCTTTTTCACTCAAAGTAGAAGCATTATATGATATCGGCATGACCGGTATGAAAAATATGCTTACAATTCTTCAAGCGATGGAAGGAGCTATATTTACCAATTTATCCGAGGTCCAAAGAAATTTAACGTCTCATGAAACTGCTGTTCAGCTTTTGGAGTGCTATTCTTGCAAGCTACTTCCATGGATCCTTGAAAATGGAGGTGCAGAGGATTTCGTGGTGCAATTTGCTGTGGATATTTGGAACCAAGCAGGAAATTGCATGGATTTTAATTCTCCATTTGAGGAAAAGAGTCTACTTGATGCAATGATGAAAGCGATGAAAGTTTCTGTTGGGTGTTGCTCTGTAGAGAGTCAAAATGTTATAATTCAAAAAGCTTACAGTATACTGTCTTCACATACCAAGTTTCAGCTTAATGATGTAGGAAGATTGACATTAACTTCTGGAAAATATGACATTTCCCCTAAGGATGAAGGGGTACTTTTATTATTTGCATCAGTAATTATTGCACTTCTCCCCAAAACACACATTCCAAATATAAGAGGGCTTCTGCATCTTTTAATAATAACCCTCCTCAAGGGTGTTGTTCCAGTTGCACAGGCTTTGGGCTCTATGCTCAACAAACTCACTTCGAAAACCAATGGTGCAGAGAAGTCTGATGAACTTACCTTGGAAGAAGCTCTTGATATTATATTCAACACAAAATTATGGTTTTCTTCTAATAATATGTTACAGATAGGTAATGGATCAAGTAATGGGAGCGAAATTGTTCTTACTGATTTATGTCTCGGCATCGCAAATGATAGATTTCTTCAAACCAATGCCATTTGTGGGCTCTCATGGATTGGAAAAGGTTTGCTGTTGCGTGGTCATGAAAAGATTAAAGATATCACAATGATATTTATAGAGTGCTTAATATCAGACAGAAGAAAGACTTCCGTGCCTTTAGTTGAAGGCTCACTTGAAAATACTGAAGAGCAGAAATGTGATCCTCTGGCAAGGAAATGTGCCACGGAAGCTTTTCATGTTCTTATGAGTGATGCTGAAGATTGTTTGAACCGAAAATTTCATGCCACAGTACGGCCTCTATATAAGCAGAGGTTTTTCTCTTCCATGATGCCCATCTTTCTGCAATTGATCTCAAGATCTGATTCTTTATTGTCCAGATCTTTATTGTTACGAGCCTTTGCACATGTCATGTCTGACACTCCACTGATTGTTATACTGAATGAAGCTAAAAAGCTCATACCAGTTCTTCTGGATTGCTTGTCTATGTTGACCGAAGATATCCAAGATAAAGATATCTTGTATGGTCTGTTGCTAGTTTTATCTGGGATGTTGACAGAGAAAAATGGACAAGAAGCAGTCATTGAGAATGCACATATTATCATCAATGGTCTAACTAAGCTTGTGGACTACCCTCATAAGACGCTTGTTCGGGAGACAGCTATTCAATGTCTTGTTGCATTGTCTGAGCTTCCTCATGTGCGTATCTATCCGTTGAGAACACAGGTTCTGCAAGCAATATTTAAGTGTCTTGATGATACAAAGAGATCTGTTCGCAATGAAGCTGTCAAATGCCGGCAAGCATGGGCATCGATTGCCTCATCTAGGAGTCTTCGTTTCTGA

Protein sequence

>Msa0224810

MAETTQLTRHIESYVDSSSTPSHQVASLDAIGLLIKTNALTLEALVRELDMYLTSTDTVIRSRGILLLAEVLTRINSISLDSKTIHSLVGFFKERMADWKAVRGALVGCLALIRRKSVVGTVTGSDAKSITQSFLQHLQVQSLGLHDRKLCFELLDYLLEHHADSIASLEEDLIFGICEAIDAEKDPECLMLAFHIVESLARLYPDPSGLLASFARDVFDLLEPYFPIHFTHQTSGDTHVQRDDLSRTLMSAFASTPVFEPFVIPLLLQKLSSSLHSAKIDSLQYLRVCSSKYGAERIAKYTGAIWSSLKDTLYTYLGEPDFSFTLAPTDGINFPKNEVVVEALSLLQQLIAQNSSQLVSLIIDDEDVNFITNSIASYEMYDTISVQEKKKLHAIGRILYISAKTSIPSCNAVFQSFFLRMMDKLGFSVSNIDGLQNGGILASQSVNFGFLYLCIELLSGCRELVILSEEKHETYCSILHSSSAVLFNAFGSVLAVTADRCPSDPDIYIGVKGLQILAMFHLDVFPIPKSTFENILKKFMSIIIEDFGQTVLWNATLKALFHIGSFVQKFSESEKAMSYKSFVVDKIMEMLSLDDIVLPFSLKVEALYDIGMTGMKNMLTILQAMEGAIFTNLSEVQRNLTSHETAVQLLECYSCKLLPWILENGGAEDFVVQFAVDIWNQAGNCMDFNSPFEEKSLLDAMMKAMKVSVGCCSVESQNVIIQKAYSILSSHTKFQLNDVGRLTLTSGKYDISPKDEGVLLLFASVIIALLPKTHIPNIRGLLHLLIITLLKGVVPVAQALGSMLNKLTSKTNGAEKSDELTLEEALDIIFNTKLWFSSNNMLQIGNGSSNGSEIVLTDLCLGIANDRFLQTNAICGLSWIGKGLLLRGHEKIKDITMIFIECLISDRRKTSVPLVEGSLENTEEQKCDPLARKCATEAFHVLMSDAEDCLNRKFHATVRPLYKQRFFSSMMPIFLQLISRSDSLLSRSLLLRAFAHVMSDTPLIVILNEAKKLIPVLLDCLSMLTEDIQDKDILYGLLLVLSGMLTEKNGQEAVIENAHIIINGLTKLVDYPHKTLVRETAIQCLVALSELPHVRIYPLRTQVLQAIFKCLDDTKRSVRNEAVKCRQAWASIASSRSLRF*