AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0091210

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0091210 MtrunA17_Chr1g0211291 100.000 489 0 0 1 489 1 489 0.0 1002
Msa0091210 MtrunA17_Chr7g0250051 98.364 489 6 2 1 489 1 487 0.0 978
Msa0091210 MtrunA17_Chr1g0208751 28.846 364 228 8 89 444 153 493 8.70e-29 119
Msa0091210 MtrunA17_Chr4g0015651 30.363 303 191 5 84 384 87 371 1.18e-28 119
Msa0091210 MtrunA17_Chr4g0016741 30.363 303 191 5 84 384 87 371 1.18e-28 119
Msa0091210 MtrunA17_CPg0492941 30.363 303 191 5 84 384 87 371 1.18e-28 119
Msa0091210 MtrunA17_Chr1g0208761 28.642 405 251 12 52 444 118 496 1.21e-27 116
Msa0091210 MtrunA17_Chr3g0090971 27.198 364 233 7 89 444 94 433 2.03e-25 108
Msa0091210 MtrunA17_Chr4g0016371 27.397 365 231 7 89 444 55 394 2.14e-25 108
Msa0091210 MtrunA17_CPg0493401 27.397 365 231 7 89 444 94 433 2.98e-25 108
Msa0091210 MtrunA17_Chr7g0229391 27.123 365 232 8 89 444 94 433 2.04e-24 105
Msa0091210 MtrunA17_MTg0490471 26.586 331 229 5 57 384 62 381 5.10e-24 105
Msa0091210 MtrunA17_Chr4g0000341 28.936 235 158 4 226 453 303 535 2.92e-21 97.1
Msa0091210 MtrunA17_Chr2g0278821 27.000 200 118 4 244 441 11 184 1.69e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0091210 AT4G38510.5 96.933 489 13 2 1 489 8 494 0.0 963
Msa0091210 AT4G38510.1 96.933 489 13 2 1 489 1 487 0.0 962
Msa0091210 AT4G38510.3 96.933 489 13 2 1 489 1 487 0.0 962
Msa0091210 AT4G38510.4 96.933 489 13 2 1 489 1 487 0.0 962
Msa0091210 AT4G38510.2 96.933 489 13 2 1 489 1 487 0.0 962
Msa0091210 AT1G20260.1 95.464 485 22 0 3 487 1 485 0.0 953
Msa0091210 AT1G76030.1 96.888 482 14 1 6 487 4 484 0.0 951
Msa0091210 ATCG00120.1 27.809 356 212 6 84 437 87 399 1.16e-28 119
Msa0091210 AT5G08690.1 28.967 397 246 11 60 444 121 493 3.52e-28 118
Msa0091210 AT5G08670.1 28.967 397 246 11 60 444 121 493 4.33e-28 117
Msa0091210 AT5G08680.1 28.967 397 246 11 60 444 124 496 5.26e-28 117
Msa0091210 ATMG01190.1 27.492 331 226 5 57 384 62 381 1.69e-26 112
Msa0091210 AT2G07698.1 27.219 338 232 5 57 391 332 658 5.24e-26 112
Msa0091210 ATCG00480.1 28.090 356 238 5 90 444 95 433 7.26e-26 110
Msa0091210 AT1G78900.1 28.936 235 158 4 226 453 302 534 2.86e-21 97.8
Msa0091210 AT1G78900.2 28.936 235 158 4 226 453 302 534 2.86e-21 97.8

Find 184 sgRNAs with CRISPR-Local

Find 482 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGACAATCTCTTGATATT+TGG 0.086118 1_2:+73357092 None:intergenic
GCATGGTTAGAATTGGAATT+TGG 0.112862 1_2:+73353132 None:intergenic
ACAGTTGTATCTGGAATTTC+TGG 0.143455 1_2:-73352003 Msa0091210:intron
CTCCGAATTGTTAATTAGTT+TGG 0.238354 1_2:-73351323 Msa0091210:three_prime_UTR
ATCTTGTAATTTCATTATTT+AGG 0.241526 1_2:-73351488 Msa0091210:three_prime_UTR
TATTTAGGATATTTGTAATA+AGG 0.248801 1_2:-73351473 Msa0091210:three_prime_UTR
ACATCTACGGGTTCTCCTTT+TGG 0.257173 1_2:+73351638 None:intergenic
TTGACAATCTCTTGATATTT+GGG 0.268902 1_2:+73357093 None:intergenic
TTTACGACCGTACAGTTTAC+TGG 0.269439 1_2:-73356689 Msa0091210:CDS
GGTCGGATATTTAACGGTTC+TGG 0.297261 1_2:-73355804 Msa0091210:CDS
CATGGTTAGAATTGGAATTT+GGG 0.316289 1_2:+73353133 None:intergenic
CCAGGATAACCACGTCTTCC+TGG 0.316708 1_2:+73353227 None:intergenic
ATATTATTAACAGTTGTATC+TGG 0.321630 1_2:-73352012 Msa0091210:intron
TCACCACTGCAGAGTGCTAT+TGG 0.329482 1_2:-73352364 Msa0091210:intron
TACTTGTGTTGCACACAGTT+TGG 0.330060 1_2:-73351572 Msa0091210:three_prime_UTR
TCTTACTACTGCTGAATATC+TGG 0.332465 1_2:-73353571 Msa0091210:CDS
ATTCTCTCTGTATGGTGCTT+TGG 0.332926 1_2:-73351292 Msa0091210:three_prime_UTR
TCATTTGGCATGGTTAGAAT+TGG 0.334129 1_2:+73353125 None:intergenic
TGCGGGTGTCGTAGGCTCCC+TGG 0.338118 1_2:+73351955 None:intergenic
CACCACTGCAGAGTGCTATT+GGG 0.340834 1_2:-73352363 Msa0091210:intron
ATTATTTCTTTACCATCATT+TGG 0.341729 1_2:+73353110 None:intergenic
CAGGTATTTGAAGGTACATC+TGG 0.345618 1_2:-73356725 Msa0091210:CDS
GAGATTGTCAATATTCGTTT+AGG 0.348480 1_2:-73357081 Msa0091210:CDS
CTGTGCAGCAATTTCATTAT+GGG 0.352240 1_2:+73355506 None:intergenic
TCTGTGCAGCAATTTCATTA+TGG 0.352813 1_2:+73355505 None:intergenic
CAGCATCTCGGCTGTAAAAC+TGG 0.358949 1_2:+73351844 None:intergenic
GTCCGTCATAAATATAATAA+AGG 0.361171 1_2:-73351706 Msa0091210:three_prime_UTR
GCACCATACAGAGAGAATTA+TGG 0.370583 1_2:+73351297 None:intergenic
GAATCTGGCAAAAGTGGCTT+TGG 0.372685 1_2:-73351361 Msa0091210:three_prime_UTR
GGAACGTGGGTGAGACTCAC+TGG 0.376659 1_2:+73358580 None:intergenic
AAGTAAGCCTCAGGTAAAAT+TGG 0.379673 1_2:+73355759 None:intergenic
CTAATTAACAATTCGGAGCT+TGG 0.392355 1_2:+73351328 None:intergenic
TTTGGGATGGTTGGAATTTG+TGG 0.399858 1_2:-73351554 Msa0091210:three_prime_UTR
GAGGCTTACTTGGATATATC+AGG 0.401427 1_2:-73355747 Msa0091210:intron
GTGATAATACGTTCAATTGT+AGG 0.404208 1_2:+73353606 None:intergenic
CATCCAACTCCTGATCTTAC+CGG 0.404800 1_2:-73352998 Msa0091210:CDS
AGGACTGTGTCTGGAGTTGC+CGG 0.405257 1_2:-73357248 Msa0091210:CDS
GGTTCTCTCACTAGGGTTGA+TGG 0.409584 1_2:+73355629 None:intergenic
AGATTACCAAATTAAGGAAA+AGG 0.411767 1_2:+73354213 None:intergenic
TGGCGAAAAGGCTGTTGTTC+AGG 0.415818 1_2:-73357019 Msa0091210:intron
ACTTGTGTTGCACACAGTTT+GGG 0.417897 1_2:-73351571 Msa0091210:three_prime_UTR
CCAAGCATGTCCAGTGATAC+AGG 0.419348 1_2:+73355825 None:intergenic
AATCAATTGCCCATGACATT+AGG 0.421049 1_2:+73351766 None:intergenic
TTTACGCCCCTCAATTCTTC+CGG 0.423822 1_2:+73353166 None:intergenic
TCTTCCTGGCACCTCTTCTC+TGG 0.425819 1_2:+73353241 None:intergenic
TACCAAACTAATTAACAATT+CGG 0.429020 1_2:+73351321 None:intergenic
CAACAACAGCTTTCATTGCC+TGG 0.434544 1_2:+73352149 None:intergenic
TCGGGATAGGTTCTCTCACT+AGG 0.437152 1_2:+73355621 None:intergenic
TGAGAGGAAGTTTGTTGCCC+AGG 0.437811 1_2:-73351973 Msa0091210:CDS
ATGCTTGGTCGGATATTTAA+CGG 0.442245 1_2:-73355810 Msa0091210:CDS
ACAGAATACAGGACTGTGTC+TGG 0.446233 1_2:-73357257 Msa0091210:intron
GATTACCAAATTAAGGAAAA+GGG 0.449091 1_2:+73354214 None:intergenic
TGATCTTACCGGATATATTA+CGG 0.452298 1_2:-73352987 Msa0091210:CDS
TAGAGACTGGAATATATTGC+GGG 0.454648 1_2:+73351938 None:intergenic
GCCTGTTCAGTTAGTCCAAA+AGG 0.458937 1_2:-73351653 Msa0091210:three_prime_UTR
ATTGGCGGACCATTGTCAAT+TGG 0.464082 1_2:+73355777 None:intergenic
CCAGGAAGACGTGGTTATCC+TGG 0.466984 1_2:-73353227 Msa0091210:CDS
TATCCATAATTCTCTCTGTA+TGG 0.467790 1_2:-73351300 Msa0091210:three_prime_UTR
CTGCCCCTCCGTAATATATC+CGG 0.472296 1_2:+73352979 None:intergenic
GGACAAGTTCTCGAGGTTGA+TGG 0.472504 1_2:-73357039 Msa0091210:CDS
TTATTAATGTCACAGAATAC+AGG 0.473189 1_2:-73357268 Msa0091210:intron
GTCAATATTCGTTTAGGCGA+TGG 0.473500 1_2:-73357075 Msa0091210:CDS
AGACCGGCAGCTGAAAATAG+AGG 0.475986 1_2:+73355531 None:intergenic
TGAACGTGCCGGAAGAATTG+AGG 0.476839 1_2:-73353174 Msa0091210:CDS
GCGGGTGTCGTAGGCTCCCT+GGG 0.477631 1_2:+73351956 None:intergenic
ACTATTGATCAGGTATTTGA+AGG 0.479209 1_2:-73356734 Msa0091210:intron
GATTGTTTGAAGTTCTAAGA+TGG 0.489532 1_2:-73357564 Msa0091210:intron
TTGTGATCAGAGAGGGAGAT+GGG 0.490683 1_2:+73358559 None:intergenic
TCCAGTCTGTATCATCTCCT+CGG 0.491457 1_2:+73355602 None:intergenic
GTAATATATCCGGTAAGATC+AGG 0.495201 1_2:+73352989 None:intergenic
TGCACACAGTTTGGGATGGT+TGG 0.495421 1_2:-73351563 Msa0091210:three_prime_UTR
CTCAAGAATGACCAATGGTC+CGG 0.496147 1_2:+73357229 None:intergenic
CTTTGAGGAGAACGGCTCAA+TGG 0.497375 1_2:-73354246 Msa0091210:CDS
ATTGTTTGAAGTTCTAAGAT+GGG 0.497535 1_2:-73357563 Msa0091210:intron
GCACAGATTTGTCGTCAAGC+TGG 0.499909 1_2:-73355489 Msa0091210:CDS
CTCGAGAACTTGTCCACGCC+GGG 0.500617 1_2:+73357047 None:intergenic
GACGACGGCACCTTGGAGAT+AGG 0.501299 1_2:-73357515 Msa0091210:CDS
CCAGTCTGTATCATCTCCTC+GGG 0.502795 1_2:+73355603 None:intergenic
GCTGCCAGAGAAGAGGTGCC+AGG 0.506143 1_2:-73353245 Msa0091210:CDS
AACCTTTATTATATTTATGA+CGG 0.506323 1_2:+73351704 None:intergenic
GAACGTGCCGGAAGAATTGA+GGG 0.506526 1_2:-73353173 Msa0091210:CDS
TTCTTTACCATCATTTGGCA+TGG 0.507173 1_2:+73353115 None:intergenic
TGAAACAAGCAAACATACAC+TGG 0.507667 1_2:+73351522 None:intergenic
GAATATATTGCGGGTGTCGT+AGG 0.509788 1_2:+73351947 None:intergenic
ATGTTCTTCCATCACTATCT+CGG 0.513623 1_2:-73352496 Msa0091210:CDS
CTGTATGCAAATTATGCCAT+TGG 0.516378 1_2:-73352181 Msa0091210:CDS
TCAATCAGCGCCTAATGTCA+TGG 0.516471 1_2:-73351776 Msa0091210:three_prime_UTR
CTGTATCATCTCCTCGGGAT+AGG 0.517113 1_2:+73355608 None:intergenic
TGCAGCTATGGGAGTTAACA+TGG 0.517732 1_2:-73354294 Msa0091210:CDS
CGACAATGACGACGGCACCT+TGG 0.517816 1_2:-73357522 Msa0091210:CDS
TGCCATTGGAAAGGATGTCC+AGG 0.518353 1_2:-73352167 Msa0091210:CDS
ATCACTATCTCGGTTGATGA+AGG 0.519694 1_2:-73352486 Msa0091210:intron
ACATTAGGCGCTGATTGAGC+AGG 0.520877 1_2:+73351781 None:intergenic
ATTCTAACCATGCCAAATGA+TGG 0.521293 1_2:-73353122 Msa0091210:intron
TCTGGGGAATCTGGCAAAAG+TGG 0.522767 1_2:-73351367 Msa0091210:three_prime_UTR
GTCTGGAGTTGCCGGACCAT+TGG 0.523391 1_2:-73357240 Msa0091210:CDS
ATCTTGCATGGACCTTACTC+CGG 0.526356 1_2:-73351914 Msa0091210:CDS
TATAGGAATCACAACATCTA+CGG 0.526427 1_2:+73351625 None:intergenic
GTAAAACTGGTCAAGAGTCT+TGG 0.529021 1_2:+73351857 None:intergenic
TGGGGAGGGAATGACTAGAA+AGG 0.531100 1_2:-73352344 Msa0091210:CDS
CAGGCAATGAAAGCTGTTGT+TGG 0.535099 1_2:-73352148 Msa0091210:CDS
ACTGAACAGGCTCGAAAATG+AGG 0.535618 1_2:+73351665 None:intergenic
TAATAAGGATAGTTGTCACT+TGG 0.536391 1_2:-73351458 Msa0091210:three_prime_UTR
GATATATCCAAGTAAGCCTC+AGG 0.536974 1_2:+73355750 None:intergenic
TCTCGAGGTTGATGGCGAAA+AGG 0.540595 1_2:-73357031 Msa0091210:CDS
TCCATGCAAGATCTAGAGAC+TGG 0.542399 1_2:+73351925 None:intergenic
CCTGTATCACTGGACATGCT+TGG 0.543279 1_2:-73355825 Msa0091210:CDS
TAGGCAGTTGCATAATAGAC+AGG 0.544818 1_2:-73352945 Msa0091210:intron
TCCAGTCTCTAGATCTTGCA+TGG 0.545696 1_2:-73351926 Msa0091210:CDS
GGCACCTTGGAGATAGGAAT+GGG 0.545991 1_2:-73357509 Msa0091210:intron
CGGCACCTTGGAGATAGGAA+TGG 0.547991 1_2:-73357510 Msa0091210:CDS
GAGAGGAAGTTTGTTGCCCA+GGG 0.548471 1_2:-73351972 Msa0091210:CDS
ATCATCAATTACCAGCATCT+CGG 0.552362 1_2:+73351832 None:intergenic
AGTGATGGAAGAACATTGAT+TGG 0.552550 1_2:+73352503 None:intergenic
CAATCAGCGCCTAATGTCAT+GGG 0.553748 1_2:-73351775 Msa0091210:three_prime_UTR
TTTGTGATCAGAGAGGGAGA+TGG 0.553774 1_2:+73358558 None:intergenic
TCTTGATTTATGCAGGGAGG+AGG 0.554491 1_2:-73354344 Msa0091210:intron
AACTGGTCAAGAGTCTTGGC+TGG 0.554684 1_2:+73351861 None:intergenic
CCCGAGGAGATGATACAGAC+TGG 0.555094 1_2:-73355603 Msa0091210:CDS
GGAAGAATTGAGGGGCGTAA+AGG 0.556865 1_2:-73353164 Msa0091210:CDS
TTGAAGTTCTAAGATGGGTG+TGG 0.557939 1_2:-73357558 Msa0091210:intron
AAGCGTGACTTTGAGGAGAA+CGG 0.558460 1_2:-73354254 Msa0091210:CDS
ACCACTGCAGAGTGCTATTG+GGG 0.563672 1_2:-73352362 Msa0091210:intron
CAGAGAGGGAGATGGGAACG+TGG 0.564661 1_2:+73358566 None:intergenic
CGGGATAGGTTCTCTCACTA+GGG 0.566355 1_2:+73355622 None:intergenic
ATAGGAATCACAACATCTAC+GGG 0.567475 1_2:+73351626 None:intergenic
TATACGATGAAGAAGTTCAC+GGG 0.567632 1_2:+73351884 None:intergenic
GCAACAATTTATGAACGTGC+CGG 0.568995 1_2:-73353185 Msa0091210:CDS
TGCCTGGACATCCTTTCCAA+TGG 0.569487 1_2:+73352165 None:intergenic
CTGCAGAGTGCTATTGGGGA+GGG 0.572458 1_2:-73352358 Msa0091210:intron
TATCACTGGACATGCTTGGT+CGG 0.573162 1_2:-73355821 Msa0091210:CDS
CTAGAGACTGGAATATATTG+CGG 0.576024 1_2:+73351937 None:intergenic
TGTGCAGCAATTTCATTATG+GGG 0.578028 1_2:+73355507 None:intergenic
TCATTCTGATGTGTCCAACC+AGG 0.578586 1_2:-73352320 Msa0091210:intron
AGCACTTTCATCTGAGGACC+TGG 0.579733 1_2:-73352119 Msa0091210:intron
TAAGCCTCAGGTAAAATTGG+CGG 0.582523 1_2:+73355762 None:intergenic
ACGAACAGATAAATACATCA+AGG 0.595675 1_2:+73351429 None:intergenic
GGACAGAACAAATGTGGACT+AGG 0.598393 1_2:+73351725 None:intergenic
AGGGGCAGATATACATCGAT+AGG 0.599010 1_2:-73352964 Msa0091210:CDS
ATGGAAGAACATTGATTGGT+GGG 0.602705 1_2:+73352507 None:intergenic
GTGTTGCACACAGTTTGGGA+TGG 0.602819 1_2:-73351567 Msa0091210:three_prime_UTR
AGGTATTTGAAGGTACATCT+GGG 0.603787 1_2:-73356724 Msa0091210:CDS
AATTTCTGGACAAGTTTGAG+AGG 0.606081 1_2:-73351989 Msa0091210:CDS
ACTTTCTCAAGAATGACCAA+TGG 0.606143 1_2:+73357224 None:intergenic
GTATACGATGAAGAAGTTCA+CGG 0.610810 1_2:+73351883 None:intergenic
TATCCGGTAAGATCAGGAGT+TGG 0.612787 1_2:+73352995 None:intergenic
TTCATCAACCGAGATAGTGA+TGG 0.612897 1_2:+73352488 None:intergenic
AGAAGAAGCACTTTCATCTG+AGG 0.617772 1_2:-73352125 Msa0091210:CDS
GGTCATTCTTGAGAAAGTGA+AGG 0.620043 1_2:-73357219 Msa0091210:intron
TTATGCTGATGCTCTTCGTG+AGG 0.621125 1_2:-73353499 Msa0091210:intron
GTCATGAATTCTATTGCTAG+AGG 0.622259 1_2:-73355564 Msa0091210:CDS
GGTATCTGCTGCCAGAGAAG+AGG 0.624465 1_2:-73353252 Msa0091210:CDS
GAAGAGGTGCCAGGAAGACG+TGG 0.628045 1_2:-73353236 Msa0091210:CDS
GACCGTACAGTTTACTGGAG+AGG 0.629013 1_2:-73356684 Msa0091210:intron
GTGCAGCAATTTCATTATGG+GGG 0.632413 1_2:+73355508 None:intergenic
TACCTCTCCAGTAAACTGTA+CGG 0.633139 1_2:+73356682 None:intergenic
GATGGAAGAACATTGATTGG+TGG 0.633609 1_2:+73352506 None:intergenic
ACTGCAGAGTGCTATTGGGG+AGG 0.635578 1_2:-73352359 Msa0091210:intron
GGCGATGGAACTACCCGGCG+TGG 0.636786 1_2:-73357060 Msa0091210:CDS
CGTACCCATTCCTATCTCCA+AGG 0.637796 1_2:+73357505 None:intergenic
GACCGGCAGCTGAAAATAGA+GGG 0.638267 1_2:+73355532 None:intergenic
CCTCGAGAACTTGTCCACGC+CGG 0.642978 1_2:+73357046 None:intergenic
GAAACAAGCAAACATACACT+GGG 0.645433 1_2:+73351523 None:intergenic
GAATATCTGGCGTATGAATG+TGG 0.645805 1_2:-73353558 Msa0091210:CDS
TGCAAATTATGCCATTGGAA+AGG 0.646117 1_2:-73352176 Msa0091210:CDS
GAAGTCTGATAATCTTCTTG+AGG 0.648163 1_2:-73355448 Msa0091210:intron
GAACGTGGGTGAGACTCACT+GGG 0.650343 1_2:+73358581 None:intergenic
CTTACCGGATATATTACGGA+GGG 0.654500 1_2:-73352983 Msa0091210:CDS
AGAGAGGGAGATGGGAACGT+GGG 0.657598 1_2:+73358567 None:intergenic
AGATCTGTATACATATAACC+AGG 0.661413 1_2:+73353209 None:intergenic
TATGACGGACAGAACAAATG+TGG 0.665248 1_2:+73351719 None:intergenic
CAAACAAGAAGAGACCTGGT+TGG 0.666933 1_2:+73352306 None:intergenic
CCGGCGTGGACAAGTTCTCG+AGG 0.672366 1_2:-73357046 Msa0091210:CDS
TCTGGAAAACCAATTGACAA+TGG 0.674567 1_2:-73355786 Msa0091210:CDS
GTTTAGGCGATGGAACTACC+CGG 0.676003 1_2:-73357065 Msa0091210:CDS
AATGCTAGCGACAATGACGA+CGG 0.701949 1_2:-73357530 Msa0091210:CDS
TTACCGGATATATTACGGAG+GGG 0.706702 1_2:-73352982 Msa0091210:CDS
TAGTGAGAGAACCTATCCCG+AGG 0.712174 1_2:-73355619 Msa0091210:CDS
ATACGATGAAGAAGTTCACG+GGG 0.717533 1_2:+73351885 None:intergenic
TGACGTACATACCTGTGCTG+TGG 0.719259 1_2:+73358525 None:intergenic
TCTTACCGGATATATTACGG+AGG 0.726344 1_2:-73352984 Msa0091210:CDS
GCAGTAGTAAGAGCAATACG+AGG 0.737884 1_2:+73353582 None:intergenic
AACGTGCCGGAAGAATTGAG+GGG 0.763048 1_2:-73353172 Msa0091210:CDS
TACGATGAAGAAGTTCACGG+GGG 0.801804 1_2:+73351886 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATTATATTATTAATTA+AGG - chr1_2:73354793-73354812 Msa0091210:intron 0.0%
!! TAATCTTAATTAAAAATTGA+AGG + chr1_2:73351435-73351454 None:intergenic 10.0%
!!! TAATATATTTCTAATTATTC+AGG - chr1_2:73354182-73354201 Msa0091210:intron 10.0%
!!! TTATAATTTTTTTAATAAGG+GGG + chr1_2:73356126-73356145 None:intergenic 10.0%
!! AATAGTTAATAAGGATAATT+TGG + chr1_2:73351981-73352000 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG - chr1_2:73351980-73351999 Msa0091210:CDS 15.0%
!!! TTAGTTTTAAAGTAATACTT+TGG - chr1_2:73352003-73352022 Msa0091210:intron 15.0%
!!! TCTTTTTATTGATTTATCAA+TGG + chr1_2:73352417-73352436 None:intergenic 15.0%
!! AAACTATAAAATGACATTAA+CGG + chr1_2:73353070-73353089 None:intergenic 15.0%
!!! TAAACAGCATATATTTTTAT+GGG + chr1_2:73353265-73353284 None:intergenic 15.0%
!!! ATAAACAGCATATATTTTTA+TGG + chr1_2:73353266-73353285 None:intergenic 15.0%
!! GAAAAGAAATATTATAAGAT+AGG - chr1_2:73354563-73354582 Msa0091210:intron 15.0%
!!! TTTTAAAGATTACCAAATTA+AGG + chr1_2:73355635-73355654 None:intergenic 15.0%
!!! AATTTTCTAAAAACGTTAAA+TGG - chr1_2:73356005-73356024 Msa0091210:intron 15.0%
!! TTATATGTAAACTATCTTAT+TGG - chr1_2:73357578-73357597 Msa0091210:intron 15.0%
!! AAAAAAAAAGACTATCTTAA+TGG - chr1_2:73357614-73357633 Msa0091210:intron 15.0%
!! AACCTTTATTATATTTATGA+CGG + chr1_2:73358138-73358157 None:intergenic 15.0%
!! ATCTTGTAATTTCATTATTT+AGG - chr1_2:73358351-73358370 Msa0091210:intron 15.0%
!!! TATTTAGGATATTTGTAATA+AGG - chr1_2:73358366-73358385 Msa0091210:intron 15.0%
!! ATTAAAAATTGAAGGAAGTA+TGG + chr1_2:73351427-73351446 None:intergenic 20.0%
!!! TAATGAGTTGAATAGAAATA+TGG - chr1_2:73351862-73351881 Msa0091210:CDS 20.0%
!! AATGATTAAAAGAAAGAGAA+TGG - chr1_2:73351947-73351966 Msa0091210:CDS 20.0%
!! AAACTAACCAATAGTTAATA+AGG + chr1_2:73351990-73352009 None:intergenic 20.0%
!! TTGAGAAATTATTATTGCAT+TGG - chr1_2:73352055-73352074 Msa0091210:intron 20.0%
!! AGAACATTCAATAAGAATAT+CGG + chr1_2:73352669-73352688 None:intergenic 20.0%
!! TCTTAATTAACTCAAAAGAT+AGG + chr1_2:73352887-73352906 None:intergenic 20.0%
!! CTTTATTAAAACTATTGATC+AGG - chr1_2:73353095-73353114 Msa0091210:intron 20.0%
!! TATCTTCTTTATCATTATCT+GGG + chr1_2:73353472-73353491 None:intergenic 20.0%
!! TTATCTTCTTTATCATTATC+TGG + chr1_2:73353473-73353492 None:intergenic 20.0%
!!! TTTAACTTGAAATTTTGTAG+TGG - chr1_2:73353609-73353628 Msa0091210:CDS 20.0%
!! TTAAATCTGCTTAGAAAATA+GGG - chr1_2:73353696-73353715 Msa0091210:intron 20.0%
!! AAACTAATAGAATAGTAATC+AGG + chr1_2:73353767-73353786 None:intergenic 20.0%
!! TAAAAGTTCTTCCTTTAAAT+TGG - chr1_2:73353886-73353905 Msa0091210:intron 20.0%
!! AAATATTATAAGATAGGAAC+TGG - chr1_2:73354569-73354588 Msa0091210:intron 20.0%
!! AATATTATAAGATAGGAACT+GGG - chr1_2:73354570-73354589 Msa0091210:intron 20.0%
!!! TCATTTTGACTGTAAAAAAA+AGG - chr1_2:73354961-73354980 Msa0091210:intron 20.0%
!! AATATGTCAATAGGAATAAA+GGG + chr1_2:73355268-73355287 None:intergenic 20.0%
!! TAATATGTCAATAGGAATAA+AGG + chr1_2:73355269-73355288 None:intergenic 20.0%
!! ATAGTGATTAATATGTCAAT+AGG + chr1_2:73355277-73355296 None:intergenic 20.0%
!! TACTCATATTACATAAAGTA+TGG + chr1_2:73355456-73355475 None:intergenic 20.0%
!! TACTTTATGTAATATGAGTA+AGG - chr1_2:73355456-73355475 Msa0091210:CDS 20.0%
!!! TTTGATTCTTCATTTTTCTT+TGG - chr1_2:73355811-73355830 Msa0091210:CDS 20.0%
!!! TTGATTCTTCATTTTTCTTT+GGG - chr1_2:73355812-73355831 Msa0091210:CDS 20.0%
!! ATCAATAGATATATATGTAG+AGG - chr1_2:73355897-73355916 Msa0091210:intron 20.0%
!! TTTAATGTAGAACTAGTATT+TGG - chr1_2:73355933-73355952 Msa0091210:intron 20.0%
!!! GACTTCATTATTTTGTTTAA+TGG - chr1_2:73356054-73356073 Msa0091210:intron 20.0%
!! GGGTAAGAAATAAAAATTAT+CGG + chr1_2:73356160-73356179 None:intergenic 20.0%
!!! TTTTCCTAATAAATTACAGT+TGG + chr1_2:73356373-73356392 None:intergenic 20.0%
!!! ATTATTTCTTTACCATCATT+TGG + chr1_2:73356732-73356751 None:intergenic 20.0%
!! ATATAAAAGCAGTTAATCAT+TGG - chr1_2:73357046-73357065 Msa0091210:CDS 20.0%
!! ACATATGTTTCTTAATCAAA+AGG - chr1_2:73357419-73357438 Msa0091210:intron 20.0%
!! TAAAAAAAGAAAACTACACA+GGG + chr1_2:73357561-73357580 None:intergenic 20.0%
!! ATAAAAAAAGAAAACTACAC+AGG + chr1_2:73357562-73357581 None:intergenic 20.0%
!! ATACAACTGTTAATAATATG+GGG + chr1_2:73357826-73357845 None:intergenic 20.0%
!! GATACAACTGTTAATAATAT+GGG + chr1_2:73357827-73357846 None:intergenic 20.0%
!! AGATACAACTGTTAATAATA+TGG + chr1_2:73357828-73357847 None:intergenic 20.0%
!! ATATTATTAACAGTTGTATC+TGG - chr1_2:73357827-73357846 Msa0091210:intron 20.0%
!! TACCAAACTAATTAACAATT+CGG + chr1_2:73358521-73358540 None:intergenic 20.0%
!! ATTAGTTTCATACTGAGATT+TGG + chr1_2:73351383-73351402 None:intergenic 25.0%
! TTAGCACAAAATAAAGAATC+AGG + chr1_2:73351459-73351478 None:intergenic 25.0%
! CAAAAATTACCATTTGCAAT+AGG - chr1_2:73351683-73351702 Msa0091210:three_prime_UTR 25.0%
!! AATTTAGAACCTATTGCAAA+TGG + chr1_2:73351695-73351714 None:intergenic 25.0%
! GAAACAAAAATTGATCTGAT+TGG + chr1_2:73351734-73351753 None:intergenic 25.0%
!!! ATTGTTTGAAGTTCTAAGAT+GGG - chr1_2:73352276-73352295 Msa0091210:intron 25.0%
! AACAAACAGACACATAATTT+AGG + chr1_2:73352552-73352571 None:intergenic 25.0%
! TTATTAATGTCACAGAATAC+AGG - chr1_2:73352571-73352590 Msa0091210:intron 25.0%
! TTGACAATCTCTTGATATTT+GGG + chr1_2:73352749-73352768 None:intergenic 25.0%
! ATTGACAATCTCTTGATATT+TGG + chr1_2:73352750-73352769 None:intergenic 25.0%
! TAATTAACTCAAAAGATAGG+AGG + chr1_2:73352884-73352903 None:intergenic 25.0%
! TGTCTTATCTCAATGAAATT+TGG - chr1_2:73353286-73353305 Msa0091210:intron 25.0%
! TAACAGCTAATGCATTATTT+AGG + chr1_2:73353323-73353342 None:intergenic 25.0%
! CTTAAATCTGCTTAGAAAAT+AGG - chr1_2:73353695-73353714 Msa0091210:intron 25.0%
! TAAATCTGCTTAGAAAATAG+GGG - chr1_2:73353697-73353716 Msa0091210:intron 25.0%
! TTGAAATTCTAGTAATCACA+AGG - chr1_2:73353735-73353754 Msa0091210:intron 25.0%
!!! ACTATTCTATTAGTTTGTTC+TGG - chr1_2:73353771-73353790 Msa0091210:intron 25.0%
! CAATTCAATAACCAAATACT+TGG + chr1_2:73353863-73353882 None:intergenic 25.0%
!!! ACATTTTGCTTTTACTATAG+TGG - chr1_2:73353928-73353947 Msa0091210:intron 25.0%
! TTTCTTATCCATCATCAATA+AGG + chr1_2:73354547-73354566 None:intergenic 25.0%
! TGGGAATTAAAAATGTGATA+AGG - chr1_2:73354589-73354608 Msa0091210:intron 25.0%
!!! CTATGATTGTGCTTATTTTA+TGG + chr1_2:73354669-73354688 None:intergenic 25.0%
! TCTTATTACCTTAGATTAAG+AGG - chr1_2:73355392-73355411 Msa0091210:intron 25.0%
! AAATTAGACCTCTTAATCTA+AGG + chr1_2:73355403-73355422 None:intergenic 25.0%
! TTTATGTAATATGAGTAAGG+TGG - chr1_2:73355459-73355478 Msa0091210:CDS 25.0%
! TTACAAATCTTGATTTATGC+AGG - chr1_2:73355488-73355507 Msa0091210:CDS 25.0%
! TACAAATCTTGATTTATGCA+GGG - chr1_2:73355489-73355508 Msa0091210:CDS 25.0%
! GATTACCAAATTAAGGAAAA+GGG + chr1_2:73355628-73355647 None:intergenic 25.0%
! AGATTACCAAATTAAGGAAA+AGG + chr1_2:73355629-73355648 None:intergenic 25.0%
! AACCAAAATTACCAGAATAA+GGG + chr1_2:73355684-73355703 None:intergenic 25.0%
! AAACCAAAATTACCAGAATA+AGG + chr1_2:73355685-73355704 None:intergenic 25.0%
! AATAAATGTCTCATAATGCT+TGG - chr1_2:73355764-73355783 Msa0091210:CDS 25.0%
!!! TGATTCTTCATTTTTCTTTG+GGG - chr1_2:73355813-73355832 Msa0091210:CDS 25.0%
!!! TACTAGTTCTACATTAAAGA+TGG + chr1_2:73355931-73355950 None:intergenic 25.0%
! TGTACCAACTGTAATTTATT+AGG - chr1_2:73356366-73356385 Msa0091210:intron 25.0%
! TAAAGAAAAATACAGGAGAA+TGG + chr1_2:73356446-73356465 None:intergenic 25.0%
!! AATCCTCTAAAGAAAAATAC+AGG + chr1_2:73356453-73356472 None:intergenic 25.0%
!! ATGAATTTTGTCTTCTGTTT+TGG - chr1_2:73356750-73356769 Msa0091210:intron 25.0%
! TGCATTATTATGTGAGAATT+TGG - chr1_2:73356976-73356995 Msa0091210:intron 25.0%
!! TTCAATTCTCTTTCTTTTCT+TGG - chr1_2:73357129-73357148 Msa0091210:intron 25.0%
! TACAACTGTTAATAATATGG+GGG + chr1_2:73357825-73357844 None:intergenic 25.0%
! GTCCGTCATAAATATAATAA+AGG - chr1_2:73358133-73358152 Msa0091210:intron 25.0%
! CCAAAAGTAAAAAATGGTAT+AGG + chr1_2:73358234-73358253 None:intergenic 25.0%
!!! CCTATACCATTTTTTACTTT+TGG - chr1_2:73358231-73358250 Msa0091210:intron 25.0%
!!! TACCATTTTTTACTTTTGGT+TGG - chr1_2:73358235-73358254 Msa0091210:intron 25.0%
!!! ACCATTTTTTACTTTTGGTT+GGG - chr1_2:73358236-73358255 Msa0091210:intron 25.0%
!!! TGATTTTTTGTGATCAGAGA+GGG + chr1_2:73351290-73351309 None:intergenic 30.0%
!!! TTGATTTTTTGTGATCAGAG+AGG + chr1_2:73351291-73351310 None:intergenic 30.0%
AAAACGAAGAAGAATTGGAT+CGG + chr1_2:73351351-73351370 None:intergenic 30.0%
ATCGAAAAACGAAGAAGAAT+TGG + chr1_2:73351356-73351375 None:intergenic 30.0%
!!! GAAGTATGGTTTTAAGAGAT+CGG + chr1_2:73351413-73351432 None:intergenic 30.0%
! ATTGGATCAAACCAGATTTT+TGG - chr1_2:73351499-73351518 Msa0091210:three_prime_UTR 30.0%
ACTTAATCCATCCAAAAATC+TGG + chr1_2:73351513-73351532 None:intergenic 30.0%
! AAGTAAACTGATTCAGAGAT+CGG + chr1_2:73351559-73351578 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG + chr1_2:73351922-73351941 None:intergenic 30.0%
!! AAGCGACACTCATTTTAAAA+CGG - chr1_2:73352123-73352142 Msa0091210:CDS 30.0%
!! GATTGTTTGAAGTTCTAAGA+TGG - chr1_2:73352275-73352294 Msa0091210:intron 30.0%
! AGTGTGACTAAATTTTACGT+TGG - chr1_2:73352707-73352726 Msa0091210:intron 30.0%
GAGATTGTCAATATTCGTTT+AGG - chr1_2:73352758-73352777 Msa0091210:intron 30.0%
ACTATTGATCAGGTATTTGA+AGG - chr1_2:73353105-73353124 Msa0091210:intron 30.0%
CAATGAAATTTGGATTATGC+AGG - chr1_2:73353296-73353315 Msa0091210:intron 30.0%
TTCTTTATCATTATCTGGGA+CGG + chr1_2:73353468-73353487 None:intergenic 30.0%
TTGCATGTCATCTTGATTAA+TGG - chr1_2:73353553-73353572 Msa0091210:CDS 30.0%
!! ATTCTATTAGTTTGTTCTGG+AGG - chr1_2:73353774-73353793 Msa0091210:intron 30.0%
!! TTCTATTAGTTTGTTCTGGA+GGG - chr1_2:73353775-73353794 Msa0091210:intron 30.0%
!!! TCCTTTAAATTGGTTTTGCT+CGG - chr1_2:73353896-73353915 Msa0091210:intron 30.0%
! CTCTTGAATTGTATGACTTT+TGG - chr1_2:73354487-73354506 Msa0091210:intron 30.0%
ATTGTGATCTGTGTTTCATT+TGG - chr1_2:73354516-73354535 Msa0091210:intron 30.0%
! TGGATTTTCCTTATTGATGA+TGG - chr1_2:73354536-73354555 Msa0091210:intron 30.0%
CAGTCAAAATGAAGAAGAAA+GGG + chr1_2:73354953-73354972 None:intergenic 30.0%
ACAGTCAAAATGAAGAAGAA+AGG + chr1_2:73354954-73354973 None:intergenic 30.0%
AGTTTCTACATAAGAGTTGT+CGG + chr1_2:73355313-73355332 None:intergenic 30.0%
TATAAGCAATATCACAAGTG+AGG + chr1_2:73355357-73355376 None:intergenic 30.0%
ACCAAAATTACCAGAATAAG+GGG + chr1_2:73355683-73355702 None:intergenic 30.0%
TTCAACAATCAATACTGGTA+AGG + chr1_2:73355725-73355744 None:intergenic 30.0%
!! TACCAGTATTGATTGTTGAA+TGG - chr1_2:73355725-73355744 Msa0091210:intron 30.0%
!! TTCATTTTTCTTTGGGGATT+GGG - chr1_2:73355819-73355838 Msa0091210:CDS 30.0%
! ATGTCTGTACAATTGCTATT+GGG - chr1_2:73356190-73356209 Msa0091210:intron 30.0%
AGAATGGTAAAAGCAGTAAA+AGG + chr1_2:73356430-73356449 None:intergenic 30.0%
! TCTCCTGTATTTTTCTTTAG+AGG - chr1_2:73356447-73356466 Msa0091210:intron 30.0%
AGATCTGTATACATATAACC+AGG + chr1_2:73356633-73356652 None:intergenic 30.0%
CATGGTTAGAATTGGAATTT+GGG + chr1_2:73356709-73356728 None:intergenic 30.0%
!! TGTCTTCTGTTTTGGATAAA+AGG - chr1_2:73356758-73356777 Msa0091210:intron 30.0%
TGATCTTACCGGATATATTA+CGG - chr1_2:73356852-73356871 Msa0091210:intron 30.0%
AACTAATCCAACATGGTTTA+TGG + chr1_2:73356954-73356973 None:intergenic 30.0%
!! ATTGGCTTGTGTTATATAGT+GGG - chr1_2:73357064-73357083 Msa0091210:CDS 30.0%
! TTGTGTTATATAGTGGGATT+CGG - chr1_2:73357070-73357089 Msa0091210:CDS 30.0%
!! GGTATTCTCTCTGAAAATTT+TGG - chr1_2:73357091-73357110 Msa0091210:CDS 30.0%
CAGGGATCATATATATTTCA+TGG + chr1_2:73357216-73357235 None:intergenic 30.0%
TACCAATCTCATACAATTCA+GGG + chr1_2:73357234-73357253 None:intergenic 30.0%
ATACCAATCTCATACAATTC+AGG + chr1_2:73357235-73357254 None:intergenic 30.0%
TAATGCTTAGAATGTTTACC+AGG + chr1_2:73357275-73357294 None:intergenic 30.0%
ACACTCTAATGATGTATCAT+TGG - chr1_2:73357452-73357471 Msa0091210:intron 30.0%
AGAGAAAATTAGTAGATACC+AGG + chr1_2:73357741-73357760 None:intergenic 30.0%
GTTTCATTAATACCACTTCA+AGG + chr1_2:73357795-73357814 None:intergenic 30.0%
TATAGGAATCACAACATCTA+CGG + chr1_2:73358217-73358236 None:intergenic 30.0%
TAATAAGGATAGTTGTCACT+TGG - chr1_2:73358381-73358400 Msa0091210:intron 30.0%
ACGAACAGATAAATACATCA+AGG + chr1_2:73358413-73358432 None:intergenic 30.0%
!!! TGAAACAAGCTTTTTTAGTC+TGG - chr1_2:73358454-73358473 Msa0091210:intron 30.0%
!!! GAAACAAGCTTTTTTAGTCT+GGG - chr1_2:73358455-73358474 Msa0091210:intron 30.0%
!!! AAACAAGCTTTTTTAGTCTG+GGG - chr1_2:73358456-73358475 Msa0091210:intron 30.0%
!!! AAAAGTGGCTTTGGTTTTAT+AGG - chr1_2:73358487-73358506 Msa0091210:intron 30.0%
CTCCGAATTGTTAATTAGTT+TGG - chr1_2:73358516-73358535 Msa0091210:intron 30.0%
TATCCATAATTCTCTCTGTA+TGG - chr1_2:73358539-73358558 Msa0091210:five_prime_UTR 30.0%
AAAATCAAAAACCACAGCAC+AGG - chr1_2:73351303-73351322 Msa0091210:three_prime_UTR 35.0%
CCAATTGAACTCAGAAACAA+TGG + chr1_2:73351484-73351503 None:intergenic 35.0%
!! CCATTGTTTCTGAGTTCAAT+TGG - chr1_2:73351481-73351500 Msa0091210:three_prime_UTR 35.0%
!! GATCAAACCAGATTTTTGGA+TGG - chr1_2:73351503-73351522 Msa0091210:three_prime_UTR 35.0%
! TGTTTAGTTTCGATTCACTG+TGG - chr1_2:73351605-73351624 Msa0091210:three_prime_UTR 35.0%
!! AAACGGAGGTCATTTTGAAA+CGG + chr1_2:73351905-73351924 None:intergenic 35.0%
!!! GACACTCATTTTAAAACGGA+GGG - chr1_2:73352127-73352146 Msa0091210:CDS 35.0%
! CAAGTCTTATCCTACTAAGT+GGG + chr1_2:73352170-73352189 None:intergenic 35.0%
TCCATCAATCATTAAGACAG+CGG + chr1_2:73352215-73352234 None:intergenic 35.0%
ACGAATACCATGAGTTATCA+AGG + chr1_2:73352509-73352528 None:intergenic 35.0%
ACTTTCTCAAGAATGACCAA+TGG + chr1_2:73352618-73352637 None:intergenic 35.0%
! AGGTATTTGAAGGTACATCT+GGG - chr1_2:73353115-73353134 Msa0091210:intron 35.0%
AAAACACATAATTGAGCCGA+TGG - chr1_2:73353404-73353423 Msa0091210:intron 35.0%
TTAAAAGGATAGCCAACCAT+CGG + chr1_2:73353423-73353442 None:intergenic 35.0%
ACATGTAAACCTAGAAACTG+TGG - chr1_2:73353662-73353681 Msa0091210:intron 35.0%
TTTCAGTTTCCACAGTTTCT+AGG + chr1_2:73353674-73353693 None:intergenic 35.0%
!! TCTATTAGTTTGTTCTGGAG+GGG - chr1_2:73353776-73353795 Msa0091210:intron 35.0%
AATACTTGGCTAAATTGCAG+AGG + chr1_2:73353849-73353868 None:intergenic 35.0%
CTGCAATTTAGCCAAGTATT+TGG - chr1_2:73353849-73353868 Msa0091210:intron 35.0%
CTACGGATATAAACAAGAGA+GGG + chr1_2:73353982-73354001 None:intergenic 35.0%
! ACAGGAGTTTTTAACACCTA+CGG + chr1_2:73353999-73354018 None:intergenic 35.0%
GTTAAAAACTCCTGTATCAC+TGG - chr1_2:73354004-73354023 Msa0091210:intron 35.0%
ATGCTTGGTCGGATATTTAA+CGG - chr1_2:73354029-73354048 Msa0091210:intron 35.0%
TCTGGAAAACCAATTGACAA+TGG - chr1_2:73354053-73354072 Msa0091210:intron 35.0%
AAGTAAGCCTCAGGTAAAAT+TGG + chr1_2:73354083-73354102 None:intergenic 35.0%
! AATTTTACCTGAGGCTTACT+TGG - chr1_2:73354082-73354101 Msa0091210:intron 35.0%
ACTGCATGTTTGTTTATGTC+TGG - chr1_2:73354140-73354159 Msa0091210:intron 35.0%
GTCATGAATTCTATTGCTAG+AGG - chr1_2:73354275-73354294 Msa0091210:CDS 35.0%
TGTGCAGCAATTTCATTATG+GGG + chr1_2:73354335-73354354 None:intergenic 35.0%
CTGTGCAGCAATTTCATTAT+GGG + chr1_2:73354336-73354355 None:intergenic 35.0%
TCTGTGCAGCAATTTCATTA+TGG + chr1_2:73354337-73354356 None:intergenic 35.0%
GAAGTCTGATAATCTTCTTG+AGG - chr1_2:73354391-73354410 Msa0091210:intron 35.0%
!! TTTGACTACTTTTGCAAAGG+TGG + chr1_2:73354646-73354665 None:intergenic 35.0%
!! TGGTTTGACTACTTTTGCAA+AGG + chr1_2:73354649-73354668 None:intergenic 35.0%
CACAATCATAGTTGTCAAAG+CGG - chr1_2:73354678-73354697 Msa0091210:intron 35.0%
GGAAGAAGTGAAAGATTGAT+TGG + chr1_2:73354932-73354951 None:intergenic 35.0%
! AGAACAGAGATGAGATTTTG+TGG - chr1_2:73354995-73355014 Msa0091210:intron 35.0%
AAATCTTGATTTATGCAGGG+AGG - chr1_2:73355492-73355511 Msa0091210:CDS 35.0%
! AGTGACCCTTTTCCTTAATT+TGG - chr1_2:73355620-73355639 Msa0091210:CDS 35.0%
TCTTTAATTCCCCCTTATTC+TGG - chr1_2:73355670-73355689 Msa0091210:intron 35.0%
CCAAAATTACCAGAATAAGG+GGG + chr1_2:73355682-73355701 None:intergenic 35.0%
AGCCATTCAACAATCAATAC+TGG + chr1_2:73355730-73355749 None:intergenic 35.0%
!! CTTCATTTTTCTTTGGGGAT+TGG - chr1_2:73355818-73355837 Msa0091210:CDS 35.0%
!! TCATTTTTCTTTGGGGATTG+GGG - chr1_2:73355820-73355839 Msa0091210:CDS 35.0%
GTACAGACATGTAAGAAACA+GGG + chr1_2:73356180-73356199 None:intergenic 35.0%
TGTACAGACATGTAAGAAAC+AGG + chr1_2:73356181-73356200 None:intergenic 35.0%
CATGTCTGTACAATTGCTAT+TGG - chr1_2:73356189-73356208 Msa0091210:intron 35.0%
! TTGCTATTGGGATTTACTGT+AGG - chr1_2:73356202-73356221 Msa0091210:intron 35.0%
TCTTACTACTGCTGAATATC+TGG - chr1_2:73356268-73356287 Msa0091210:intron 35.0%
GCATGGTTAGAATTGGAATT+TGG + chr1_2:73356710-73356729 None:intergenic 35.0%
TCATTTGGCATGGTTAGAAT+TGG + chr1_2:73356717-73356736 None:intergenic 35.0%
ATTCTAACCATGCCAAATGA+TGG - chr1_2:73356717-73356736 Msa0091210:CDS 35.0%
TTCTTTACCATCATTTGGCA+TGG + chr1_2:73356727-73356746 None:intergenic 35.0%
GTAATATATCCGGTAAGATC+AGG + chr1_2:73356853-73356872 None:intergenic 35.0%
ATGAATGCCATAAACCATGT+TGG - chr1_2:73356944-73356963 Msa0091210:intron 35.0%
!! CATTGGCTTGTGTTATATAG+TGG - chr1_2:73357063-73357082 Msa0091210:CDS 35.0%
ATCCCTGAATTGTATGAGAT+TGG - chr1_2:73357229-73357248 Msa0091210:CDS 35.0%
! ATGGAAGAACATTGATTGGT+GGG + chr1_2:73357335-73357354 None:intergenic 35.0%
! AGTGATGGAAGAACATTGAT+TGG + chr1_2:73357339-73357358 None:intergenic 35.0%
ATGTTCTTCCATCACTATCT+CGG - chr1_2:73357343-73357362 Msa0091210:intron 35.0%
GATTTCAAAGTTCTGTCAAG+TGG - chr1_2:73357393-73357412 Msa0091210:intron 35.0%
CTGTATGCAAATTATGCCAT+TGG - chr1_2:73357658-73357677 Msa0091210:intron 35.0%
TGCAAATTATGCCATTGGAA+AGG - chr1_2:73357663-73357682 Msa0091210:intron 35.0%
TAGTGAAATTGTCCTTGAAG+TGG - chr1_2:73357780-73357799 Msa0091210:intron 35.0%
! ACAGTTGTATCTGGAATTTC+TGG - chr1_2:73357836-73357855 Msa0091210:intron 35.0%
! AATTTCTGGACAAGTTTGAG+AGG - chr1_2:73357850-73357869 Msa0091210:intron 35.0%
TAGAGACTGGAATATATTGC+GGG + chr1_2:73357904-73357923 None:intergenic 35.0%
CTAGAGACTGGAATATATTG+CGG + chr1_2:73357905-73357924 None:intergenic 35.0%
TATACGATGAAGAAGTTCAC+GGG + chr1_2:73357958-73357977 None:intergenic 35.0%
GTATACGATGAAGAAGTTCA+CGG + chr1_2:73357959-73357978 None:intergenic 35.0%
ATCATCAATTACCAGCATCT+CGG + chr1_2:73358010-73358029 None:intergenic 35.0%
AATCAATTGCCCATGACATT+AGG + chr1_2:73358076-73358095 None:intergenic 35.0%
ATAGGAATCACAACATCTAC+GGG + chr1_2:73358216-73358235 None:intergenic 35.0%
GCCCAACCAAAAGTAAAAAA+TGG + chr1_2:73358240-73358259 None:intergenic 35.0%
GAAACAAGCAAACATACACT+GGG + chr1_2:73358319-73358338 None:intergenic 35.0%
TGAAACAAGCAAACATACAC+TGG + chr1_2:73358320-73358339 None:intergenic 35.0%
CTAATTAACAATTCGGAGCT+TGG + chr1_2:73358514-73358533 None:intergenic 35.0%
!!! CGACACTCATTTTAAAACGG+AGG - chr1_2:73352126-73352145 Msa0091210:CDS 40.0%
AATTGTGGAACCCACTTAGT+AGG - chr1_2:73352157-73352176 Msa0091210:CDS 40.0%
! CCAAGTCTTATCCTACTAAG+TGG + chr1_2:73352171-73352190 None:intergenic 40.0%
CCACTTAGTAGGATAAGACT+TGG - chr1_2:73352168-73352187 Msa0091210:CDS 40.0%
CCATCAATCATTAAGACAGC+GGG + chr1_2:73352214-73352233 None:intergenic 40.0%
!! TTGAAGTTCTAAGATGGGTG+TGG - chr1_2:73352281-73352300 Msa0091210:intron 40.0%
!! ACGTGTCTTATTGGTTTACG+TGG - chr1_2:73352354-73352373 Msa0091210:CDS 40.0%
! GCATGTTAATTTTCCCCTGT+GGG - chr1_2:73352376-73352395 Msa0091210:intron 40.0%
TATGTATACACACACCCACA+GGG + chr1_2:73352393-73352412 None:intergenic 40.0%
! CAATCTGCCTTGATAACTCA+TGG - chr1_2:73352499-73352518 Msa0091210:CDS 40.0%
GGTCATTCTTGAGAAAGTGA+AGG - chr1_2:73352620-73352639 Msa0091210:intron 40.0%
GTCAATATTCGTTTAGGCGA+TGG - chr1_2:73352764-73352783 Msa0091210:intron 40.0%
ATGATGGTTATGCATGCTGA+AGG + chr1_2:73352852-73352871 None:intergenic 40.0%
AAGAATGCTACTCAGAAGCT+CGG + chr1_2:73352952-73352971 None:intergenic 40.0%
! CAGGTATTTGAAGGTACATC+TGG - chr1_2:73353114-73353133 Msa0091210:intron 40.0%
TTTACGACCGTACAGTTTAC+TGG - chr1_2:73353150-73353169 Msa0091210:CDS 40.0%
TACCTCTCCAGTAAACTGTA+CGG + chr1_2:73353160-73353179 None:intergenic 40.0%
GGTAGCAGTAGCAGTTTAAA+AGG + chr1_2:73353438-73353457 None:intergenic 40.0%
! ATTATCTGGGACGGTTTAGT+AGG + chr1_2:73353459-73353478 None:intergenic 40.0%
GCTTAGGGGATAGTTACAAT+TGG + chr1_2:73353498-73353517 None:intergenic 40.0%
ATCTGCTTAGAAAATAGGGG+AGG - chr1_2:73353700-73353719 Msa0091210:intron 40.0%
!! CTATTAGTTTGTTCTGGAGG+GGG - chr1_2:73353777-73353796 Msa0091210:intron 40.0%
GCCGAGCAAAACCAATTTAA+AGG + chr1_2:73353900-73353919 None:intergenic 40.0%
CCTACGGATATAAACAAGAG+AGG + chr1_2:73353983-73354002 None:intergenic 40.0%
! CCTCTCTTGTTTATATCCGT+AGG - chr1_2:73353980-73353999 Msa0091210:intron 40.0%
TAAGCCTCAGGTAAAATTGG+CGG + chr1_2:73354080-73354099 None:intergenic 40.0%
GATATATCCAAGTAAGCCTC+AGG + chr1_2:73354092-73354111 None:intergenic 40.0%
GAGGCTTACTTGGATATATC+AGG - chr1_2:73354092-73354111 Msa0091210:intron 40.0%
AATTTCATTATGGGGGAGAC+CGG + chr1_2:73354327-73354346 None:intergenic 40.0%
GTGCAGCAATTTCATTATGG+GGG + chr1_2:73354334-73354353 None:intergenic 40.0%
GATTGGAGATCTAGAGATCT+AGG + chr1_2:73354915-73354934 None:intergenic 40.0%
!!! TGCCATTGTTTTTGCAGCTA+TGG - chr1_2:73355533-73355552 Msa0091210:CDS 40.0%
!!! GCCATTGTTTTTGCAGCTAT+GGG - chr1_2:73355534-73355553 Msa0091210:CDS 40.0%
TCCCATAGCTGCAAAAACAA+TGG + chr1_2:73355538-73355557 None:intergenic 40.0%
!!! GTTTTTCAAGCGTGACTTTG+AGG - chr1_2:73355578-73355597 Msa0091210:CDS 40.0%
! CCCCCTTATTCTGGTAATTT+TGG - chr1_2:73355679-73355698 Msa0091210:intron 40.0%
!! CATTTTTCTTTGGGGATTGG+GGG - chr1_2:73355821-73355840 Msa0091210:CDS 40.0%
!! ACTTCGCATGTGTTTGGTTT+TGG + chr1_2:73355967-73355986 None:intergenic 40.0%
GAATATCTGGCGTATGAATG+TGG - chr1_2:73356281-73356300 Msa0091210:intron 40.0%
CTGTAGGATCAAGAACAAGA+AGG + chr1_2:73356568-73356587 None:intergenic 40.0%
CTTCTTGTTCTTGATCCTAC+AGG - chr1_2:73356566-73356585 Msa0091210:intron 40.0%
GCAACAATTTATGAACGTGC+CGG - chr1_2:73356654-73356673 Msa0091210:intron 40.0%
TCTTACCGGATATATTACGG+AGG - chr1_2:73356855-73356874 Msa0091210:intron 40.0%
CTTACCGGATATATTACGGA+GGG - chr1_2:73356856-73356875 Msa0091210:intron 40.0%
TTACCGGATATATTACGGAG+GGG - chr1_2:73356857-73356876 Msa0091210:intron 40.0%
TAGGCAGTTGCATAATAGAC+AGG - chr1_2:73356894-73356913 Msa0091210:intron 40.0%
CAGTTGCATAATAGACAGGT+GGG - chr1_2:73356898-73356917 Msa0091210:intron 40.0%
ATGCAGCAACTAATCCAACA+TGG + chr1_2:73356961-73356980 None:intergenic 40.0%
TACAATCAGTCTAAGTGACC+TGG - chr1_2:73357254-73357273 Msa0091210:CDS 40.0%
! GATGGAAGAACATTGATTGG+TGG + chr1_2:73357336-73357355 None:intergenic 40.0%
TTCATCAACCGAGATAGTGA+TGG + chr1_2:73357354-73357373 None:intergenic 40.0%
!! ATCACTATCTCGGTTGATGA+AGG - chr1_2:73357353-73357372 Msa0091210:intron 40.0%
!! AGAAGAAGCACTTTCATCTG+AGG - chr1_2:73357714-73357733 Msa0091210:intron 40.0%
ATACGATGAAGAAGTTCACG+GGG + chr1_2:73357957-73357976 None:intergenic 40.0%
GTAAAACTGGTCAAGAGTCT+TGG + chr1_2:73357985-73358004 None:intergenic 40.0%
!! TATGACGGACAGAACAAATG+TGG + chr1_2:73358123-73358142 None:intergenic 40.0%
! TCCTTTTGGACTAACTGAAC+AGG + chr1_2:73358190-73358209 None:intergenic 40.0%
TACTTGTGTTGCACACAGTT+TGG - chr1_2:73358267-73358286 Msa0091210:intron 40.0%
ACTTGTGTTGCACACAGTTT+GGG - chr1_2:73358268-73358287 Msa0091210:intron 40.0%
! TTTGGGATGGTTGGAATTTG+TGG - chr1_2:73358285-73358304 Msa0091210:intron 40.0%
!!! CTTTTTTAGTCTGGGGAATC+TGG - chr1_2:73358463-73358482 Msa0091210:intron 40.0%
GCACCATACAGAGAGAATTA+TGG + chr1_2:73358545-73358564 None:intergenic 40.0%
ATTCTCTCTGTATGGTGCTT+TGG - chr1_2:73358547-73358566 Msa0091210:five_prime_UTR 40.0%
TTGTGATCAGAGAGGGAGAT+GGG + chr1_2:73351283-73351302 None:intergenic 45.0%
TTTGTGATCAGAGAGGGAGA+TGG + chr1_2:73351284-73351303 None:intergenic 45.0%
!!! GGAGGTCATTTTGAAACGGA+GGG + chr1_2:73351901-73351920 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr1_2:73351919-73351938 None:intergenic 45.0%
ACGGAGGGAGTAGAAAATTG+TGG - chr1_2:73352142-73352161 Msa0091210:CDS 45.0%
CCCGCTGTCTTAATGATTGA+TGG - chr1_2:73352211-73352230 Msa0091210:intron 45.0%
AATGCTAGCGACAATGACGA+CGG - chr1_2:73352309-73352328 Msa0091210:intron 45.0%
GGAATGGGTACGTGTCTTAT+TGG - chr1_2:73352345-73352364 Msa0091210:CDS 45.0%
! GGCATGTTAATTTTCCCCTG+TGG - chr1_2:73352375-73352394 Msa0091210:intron 45.0%
ATGTATACACACACCCACAG+GGG + chr1_2:73352392-73352411 None:intergenic 45.0%
CTATGTATACACACACCCAC+AGG + chr1_2:73352394-73352413 None:intergenic 45.0%
ACAGAATACAGGACTGTGTC+TGG - chr1_2:73352582-73352601 Msa0091210:intron 45.0%
CTCAAGAATGACCAATGGTC+CGG + chr1_2:73352613-73352632 None:intergenic 45.0%
TTACGTTGGTCAACTGCATC+AGG - chr1_2:73352721-73352740 Msa0091210:intron 45.0%
TACGTTGGTCAACTGCATCA+GGG - chr1_2:73352722-73352741 Msa0091210:intron 45.0%
TAGGAGGCAAGTACAGATGA+TGG + chr1_2:73352868-73352887 None:intergenic 45.0%
AATAAAGCAGACAGCGATGG+AGG + chr1_2:73352985-73353004 None:intergenic 45.0%
GTGAATAAAGCAGACAGCGA+TGG + chr1_2:73352988-73353007 None:intergenic 45.0%
CACATAATTGAGCCGATGGT+TGG - chr1_2:73353408-73353427 Msa0091210:intron 45.0%
!! AGCAGTTTTGGCATGCTTAG+GGG + chr1_2:73353512-73353531 None:intergenic 45.0%
!! CAGCAGTTTTGGCATGCTTA+GGG + chr1_2:73353513-73353532 None:intergenic 45.0%
!! ACAGCAGTTTTGGCATGCTT+AGG + chr1_2:73353514-73353533 None:intergenic 45.0%
! AAGGGGGATAACAGCAGTTT+TGG + chr1_2:73353524-73353543 None:intergenic 45.0%
ACATGCAACACAGTCTGAAG+GGG + chr1_2:73353541-73353560 None:intergenic 45.0%
GACATGCAACACAGTCTGAA+GGG + chr1_2:73353542-73353561 None:intergenic 45.0%
TGACATGCAACACAGTCTGA+AGG + chr1_2:73353543-73353562 None:intergenic 45.0%
ATTGCAGAGGAACAGAGGAT+GGG + chr1_2:73353836-73353855 None:intergenic 45.0%
AATTGCAGAGGAACAGAGGA+TGG + chr1_2:73353837-73353856 None:intergenic 45.0%
GCTAAATTGCAGAGGAACAG+AGG + chr1_2:73353841-73353860 None:intergenic 45.0%
TATCACTGGACATGCTTGGT+CGG - chr1_2:73354018-73354037 Msa0091210:intron 45.0%
GGTCGGATATTTAACGGTTC+TGG - chr1_2:73354035-73354054 Msa0091210:intron 45.0%
! ATTGGCGGACCATTGTCAAT+TGG + chr1_2:73354065-73354084 None:intergenic 45.0%
TCCAGTCTGTATCATCTCCT+CGG + chr1_2:73354240-73354259 None:intergenic 45.0%
! ATCCCTCTATTTTCAGCTGC+CGG - chr1_2:73354305-73354324 Msa0091210:CDS 45.0%
! TGATAAGGTTACAGCGCTGA+AGG - chr1_2:73354604-73354623 Msa0091210:intron 45.0%
TAGTTGTCAAAGCGGAAACG+CGG - chr1_2:73354686-73354705 Msa0091210:intron 45.0%
AGGCAAAAGCGGAACAAAAG+CGG + chr1_2:73355095-73355114 None:intergenic 45.0%
TTGTCAATAGCGGTCTAACG+CGG + chr1_2:73355183-73355202 None:intergenic 45.0%
GTGCTCTCTGTTGTCAATAG+CGG + chr1_2:73355193-73355212 None:intergenic 45.0%
TCTTGATTTATGCAGGGAGG+AGG - chr1_2:73355495-73355514 Msa0091210:CDS 45.0%
TGCAGCTATGGGAGTTAACA+TGG - chr1_2:73355545-73355564 Msa0091210:CDS 45.0%
! AAGCGTGACTTTGAGGAGAA+CGG - chr1_2:73355585-73355604 Msa0091210:CDS 45.0%
ACCAAACACATGCGAAGTGT+AGG - chr1_2:73355969-73355988 Msa0091210:intron 45.0%
CCAAACACATGCGAAGTGTA+GGG - chr1_2:73355970-73355989 Msa0091210:intron 45.0%
GCAGTAGTAAGAGCAATACG+AGG + chr1_2:73356260-73356279 None:intergenic 45.0%
TTATGCTGATGCTCTTCGTG+AGG - chr1_2:73356340-73356359 Msa0091210:intron 45.0%
TTTACGCCCCTCAATTCTTC+CGG + chr1_2:73356676-73356695 None:intergenic 45.0%
CATCCAACTCCTGATCTTAC+CGG - chr1_2:73356841-73356860 Msa0091210:intron 45.0%
TATCCGGTAAGATCAGGAGT+TGG + chr1_2:73356847-73356866 None:intergenic 45.0%
AGGGGCAGATATACATCGAT+AGG - chr1_2:73356875-73356894 Msa0091210:intron 45.0%
GCAGTTGCATAATAGACAGG+TGG - chr1_2:73356897-73356916 Msa0091210:intron 45.0%
TCATTCTGATGTGTCCAACC+AGG - chr1_2:73357519-73357538 Msa0091210:CDS 45.0%
CAAACAAGAAGAGACCTGGT+TGG + chr1_2:73357536-73357555 None:intergenic 45.0%
GGAACAAACAAGAAGAGACC+TGG + chr1_2:73357540-73357559 None:intergenic 45.0%
CAACAACAGCTTTCATTGCC+TGG + chr1_2:73357693-73357712 None:intergenic 45.0%
CAGGCAATGAAAGCTGTTGT+TGG - chr1_2:73357691-73357710 Msa0091210:intron 45.0%
! GAATATATTGCGGGTGTCGT+AGG + chr1_2:73357895-73357914 None:intergenic 45.0%
TCCAGTCTCTAGATCTTGCA+TGG - chr1_2:73357913-73357932 Msa0091210:intron 45.0%
TCCATGCAAGATCTAGAGAC+TGG + chr1_2:73357917-73357936 None:intergenic 45.0%
ATCTTGCATGGACCTTACTC+CGG - chr1_2:73357925-73357944 Msa0091210:intron 45.0%
TACGATGAAGAAGTTCACGG+GGG + chr1_2:73357956-73357975 None:intergenic 45.0%
TCAATCAGCGCCTAATGTCA+TGG - chr1_2:73358063-73358082 Msa0091210:intron 45.0%
CAATCAGCGCCTAATGTCAT+GGG - chr1_2:73358064-73358083 Msa0091210:intron 45.0%
GGACAGAACAAATGTGGACT+AGG + chr1_2:73358117-73358136 None:intergenic 45.0%
ACTGAACAGGCTCGAAAATG+AGG + chr1_2:73358177-73358196 None:intergenic 45.0%
GCCTGTTCAGTTAGTCCAAA+AGG - chr1_2:73358186-73358205 Msa0091210:intron 45.0%
! ACATCTACGGGTTCTCCTTT+TGG + chr1_2:73358204-73358223 None:intergenic 45.0%
GAATCTGGCAAAAGTGGCTT+TGG - chr1_2:73358478-73358497 Msa0091210:intron 45.0%
!!! ATTATAATTTTTTTAATAAG+GGG + chr1_2:73356127-73356146 None:intergenic 5.0%
!!! CATTATAATTTTTTTAATAA+GGG + chr1_2:73356128-73356147 None:intergenic 5.0%
!!! TCATTATAATTTTTTTAATA+AGG + chr1_2:73356129-73356148 None:intergenic 5.0%
TGACGTACATACCTGTGCTG+TGG + chr1_2:73351317-73351336 None:intergenic 50.0%
!!! CGGAGGTCATTTTGAAACGG+AGG + chr1_2:73351902-73351921 None:intergenic 50.0%
GGCACCTTGGAGATAGGAAT+GGG - chr1_2:73352330-73352349 Msa0091210:CDS 50.0%
CGTACCCATTCCTATCTCCA+AGG + chr1_2:73352337-73352356 None:intergenic 50.0%
GTTTAGGCGATGGAACTACC+CGG - chr1_2:73352774-73352793 Msa0091210:intron 50.0%
GGACAAGTTCTCGAGGTTGA+TGG - chr1_2:73352800-73352819 Msa0091210:intron 50.0%
!! TCTCGAGGTTGATGGCGAAA+AGG - chr1_2:73352808-73352827 Msa0091210:intron 50.0%
TGGCGAAAAGGCTGTTGTTC+AGG - chr1_2:73352820-73352839 Msa0091210:intron 50.0%
CTCAGAAGCTCGGAACACTT+TGG + chr1_2:73352942-73352961 None:intergenic 50.0%
GACCGTACAGTTTACTGGAG+AGG - chr1_2:73353155-73353174 Msa0091210:CDS 50.0%
CATGCAACACAGTCTGAAGG+GGG + chr1_2:73353540-73353559 None:intergenic 50.0%
! TTCTGGAGGGGGAATTTCTC+AGG - chr1_2:73353788-73353807 Msa0091210:intron 50.0%
!! AGGATGGGCTAAATCTCGTG+AGG + chr1_2:73353821-73353840 None:intergenic 50.0%
AGAGGGACAGATGAAGTCAG+AGG + chr1_2:73353965-73353984 None:intergenic 50.0%
CCAAGCATGTCCAGTGATAC+AGG + chr1_2:73354017-73354036 None:intergenic 50.0%
CCTGTATCACTGGACATGCT+TGG - chr1_2:73354014-73354033 Msa0091210:intron 50.0%
! TGGTCCGCCAATTTTACCTG+AGG - chr1_2:73354073-73354092 Msa0091210:intron 50.0%
GGTTCTCTCACTAGGGTTGA+TGG + chr1_2:73354213-73354232 None:intergenic 50.0%
CGGGATAGGTTCTCTCACTA+GGG + chr1_2:73354220-73354239 None:intergenic 50.0%
TCGGGATAGGTTCTCTCACT+AGG + chr1_2:73354221-73354240 None:intergenic 50.0%
TAGTGAGAGAACCTATCCCG+AGG - chr1_2:73354220-73354239 Msa0091210:CDS 50.0%
CTGTATCATCTCCTCGGGAT+AGG + chr1_2:73354234-73354253 None:intergenic 50.0%
CCAGTCTGTATCATCTCCTC+GGG + chr1_2:73354239-73354258 None:intergenic 50.0%
GACCGGCAGCTGAAAATAGA+GGG + chr1_2:73354310-73354329 None:intergenic 50.0%
AGACCGGCAGCTGAAAATAG+AGG + chr1_2:73354311-73354330 None:intergenic 50.0%
GCACAGATTTGTCGTCAAGC+TGG - chr1_2:73354350-73354369 Msa0091210:intron 50.0%
GGCAAAAGCGGAACAAAAGC+GGG + chr1_2:73355094-73355113 None:intergenic 50.0%
! CTTTGAGGAGAACGGCTCAA+TGG - chr1_2:73355593-73355612 Msa0091210:CDS 50.0%
CCCTACACTTCGCATGTGTT+TGG + chr1_2:73355973-73355992 None:intergenic 50.0%
TGAACGTGCCGGAAGAATTG+AGG - chr1_2:73356665-73356684 Msa0091210:intron 50.0%
GAACGTGCCGGAAGAATTGA+GGG - chr1_2:73356666-73356685 Msa0091210:intron 50.0%
AACGTGCCGGAAGAATTGAG+GGG - chr1_2:73356667-73356686 Msa0091210:intron 50.0%
! GGAAGAATTGAGGGGCGTAA+AGG - chr1_2:73356675-73356694 Msa0091210:intron 50.0%
CTGCCCCTCCGTAATATATC+CGG + chr1_2:73356863-73356882 None:intergenic 50.0%
! TCACCACTGCAGAGTGCTAT+TGG - chr1_2:73357475-73357494 Msa0091210:intron 50.0%
! CACCACTGCAGAGTGCTATT+GGG - chr1_2:73357476-73357495 Msa0091210:intron 50.0%
! ACCACTGCAGAGTGCTATTG+GGG - chr1_2:73357477-73357496 Msa0091210:intron 50.0%
TGGGGAGGGAATGACTAGAA+AGG - chr1_2:73357495-73357514 Msa0091210:intron 50.0%
TGCCATTGGAAAGGATGTCC+AGG - chr1_2:73357672-73357691 Msa0091210:intron 50.0%
TGCCTGGACATCCTTTCCAA+TGG + chr1_2:73357677-73357696 None:intergenic 50.0%
AGCACTTTCATCTGAGGACC+TGG - chr1_2:73357720-73357739 Msa0091210:intron 50.0%
!! TGAGAGGAAGTTTGTTGCCC+AGG - chr1_2:73357866-73357885 Msa0091210:intron 50.0%
!! GAGAGGAAGTTTGTTGCCCA+GGG - chr1_2:73357867-73357886 Msa0091210:intron 50.0%
GAAGTTCACGGGGGAAAATC+CGG + chr1_2:73357947-73357966 None:intergenic 50.0%
AACTGGTCAAGAGTCTTGGC+TGG + chr1_2:73357981-73358000 None:intergenic 50.0%
CAGCATCTCGGCTGTAAAAC+TGG + chr1_2:73357998-73358017 None:intergenic 50.0%
! CAGTTTTACAGCCGAGATGC+TGG - chr1_2:73357996-73358015 Msa0091210:intron 50.0%
!! ACATTAGGCGCTGATTGAGC+AGG + chr1_2:73358061-73358080 None:intergenic 50.0%
GTGTTGCACACAGTTTGGGA+TGG - chr1_2:73358272-73358291 Msa0091210:intron 50.0%
! TGCACACAGTTTGGGATGGT+TGG - chr1_2:73358276-73358295 Msa0091210:intron 50.0%
TCTGGGGAATCTGGCAAAAG+TGG - chr1_2:73358472-73358491 Msa0091210:intron 50.0%
GAACGTGGGTGAGACTCACT+GGG + chr1_2:73351261-73351280 None:intergenic 55.0%
AGAGAGGGAGATGGGAACGT+GGG + chr1_2:73351275-73351294 None:intergenic 55.0%
CGGCACCTTGGAGATAGGAA+TGG - chr1_2:73352329-73352348 Msa0091210:CDS 55.0%
! AGGACTGTGTCTGGAGTTGC+CGG - chr1_2:73352591-73352610 Msa0091210:intron 55.0%
GGGACAGATGAAGTCAGAGG+TGG + chr1_2:73353962-73353981 None:intergenic 55.0%
CCCGAGGAGATGATACAGAC+TGG - chr1_2:73354236-73354255 Msa0091210:CDS 55.0%
GGCCACCCCAAAAATTGACG+CGG - chr1_2:73354717-73354736 Msa0091210:intron 55.0%
! ACCGCGCCGCGTCAATTTTT+GGG + chr1_2:73354726-73354745 None:intergenic 55.0%
! TACCGCGCCGCGTCAATTTT+TGG + chr1_2:73354727-73354746 None:intergenic 55.0%
GAACAAAAGCGGGTCAACGC+GGG + chr1_2:73355084-73355103 None:intergenic 55.0%
GGAACAAAAGCGGGTCAACG+CGG + chr1_2:73355085-73355104 None:intergenic 55.0%
AGTCGCGCGTTAGGCAAAAG+CGG + chr1_2:73355106-73355125 None:intergenic 55.0%
! CTTTTGCCTAACGCGCGACT+CGG - chr1_2:73355106-73355125 Msa0091210:intron 55.0%
CTCTGGCAGCAGATACCTGT+AGG + chr1_2:73356584-73356603 None:intergenic 55.0%
GGTATCTGCTGCCAGAGAAG+AGG - chr1_2:73356587-73356606 Msa0091210:intron 55.0%
TCTTCCTGGCACCTCTTCTC+TGG + chr1_2:73356601-73356620 None:intergenic 55.0%
CCAGGATAACCACGTCTTCC+TGG + chr1_2:73356615-73356634 None:intergenic 55.0%
CCAGGAAGACGTGGTTATCC+TGG - chr1_2:73356612-73356631 Msa0091210:intron 55.0%
TCCCCAATAGCACTCTGCAG+TGG + chr1_2:73357481-73357500 None:intergenic 55.0%
! ACTGCAGAGTGCTATTGGGG+AGG - chr1_2:73357480-73357499 Msa0091210:intron 55.0%
! CTGCAGAGTGCTATTGGGGA+GGG - chr1_2:73357481-73357500 Msa0091210:intron 55.0%
ACGGGGGAAAATCCGGAGTA+AGG + chr1_2:73357940-73357959 None:intergenic 55.0%
GGAACGTGGGTGAGACTCAC+TGG + chr1_2:73351262-73351281 None:intergenic 60.0%
CAGAGAGGGAGATGGGAACG+TGG + chr1_2:73351276-73351295 None:intergenic 60.0%
CGACAATGACGACGGCACCT+TGG - chr1_2:73352317-73352336 Msa0091210:intron 60.0%
GACGACGGCACCTTGGAGAT+AGG - chr1_2:73352324-73352343 Msa0091210:CDS 60.0%
! GTCTGGAGTTGCCGGACCAT+TGG - chr1_2:73352599-73352618 Msa0091210:intron 60.0%
CTCGAGAACTTGTCCACGCC+GGG + chr1_2:73352795-73352814 None:intergenic 60.0%
CCTCGAGAACTTGTCCACGC+CGG + chr1_2:73352796-73352815 None:intergenic 60.0%
!! CGCCGCGTCAATTTTTGGGG+TGG + chr1_2:73354722-73354741 None:intergenic 60.0%
! CCGCGCCGCGTCAATTTTTG+GGG + chr1_2:73354725-73354744 None:intergenic 60.0%
CCCCAAAAATTGACGCGGCG+CGG - chr1_2:73354722-73354741 Msa0091210:intron 60.0%
AATTGACGCGGCGCGGTAAG+CGG - chr1_2:73354729-73354748 Msa0091210:intron 60.0%
! GCGGGCGCTTTTACATGACG+CGG - chr1_2:73354759-73354778 Msa0091210:intron 60.0%
GGTCAACGCGGGCAAAAAGC+GGG + chr1_2:73355045-73355064 None:intergenic 60.0%
GGGTCAACGCGGGCAAAAAG+CGG + chr1_2:73355046-73355065 None:intergenic 60.0%
!! GAAGAGGTGCCAGGAAGACG+TGG - chr1_2:73356603-73356622 Msa0091210:intron 60.0%
CCGGCGTGGACAAGTTCTCG+AGG - chr1_2:73352793-73352812 Msa0091210:intron 65.0%
GTCAAAGCGGAAACGCGGCG+CGG - chr1_2:73354691-73354710 Msa0091210:intron 65.0%
ATTGACGCGGCGCGGTAAGC+GGG - chr1_2:73354730-73354749 Msa0091210:intron 65.0%
!! GCTGCCAGAGAAGAGGTGCC+AGG - chr1_2:73356594-73356613 Msa0091210:intron 65.0%
GGCGATGGAACTACCCGGCG+TGG - chr1_2:73352779-73352798 Msa0091210:intron 70.0%
CGGGCAAAGCGGGTCAACGC+GGG + chr1_2:73355056-73355075 None:intergenic 70.0%
GCGGGCAAAGCGGGTCAACG+CGG + chr1_2:73355057-73355076 None:intergenic 70.0%
GCGGGCAAAGCGGGCAAAGC+GGG + chr1_2:73355066-73355085 None:intergenic 70.0%
CGCGGGCAAAGCGGGCAAAG+CGG + chr1_2:73355067-73355086 None:intergenic 70.0%
CGGGTCAACGCGGGCAAAGC+GGG + chr1_2:73355075-73355094 None:intergenic 70.0%
GCGGGTCAACGCGGGCAAAG+CGG + chr1_2:73355076-73355095 None:intergenic 70.0%
ACGCGACCGAGTCGCGCGTT+AGG + chr1_2:73355115-73355134 None:intergenic 70.0%
CGGTCGCGTTCTGACGCGCT+AGG - chr1_2:73355126-73355145 Msa0091210:intron 70.0%
GGTCTAACGCGGCGCGATCG+CGG + chr1_2:73355172-73355191 None:intergenic 70.0%
! GCGGGTGTCGTAGGCTCCCT+GGG + chr1_2:73357886-73357905 None:intergenic 70.0%
! TGCGGGTGTCGTAGGCTCCC+TGG + chr1_2:73357887-73357906 None:intergenic 70.0%
! AGCGGAAACGCGGCGCGGCG+CGG - chr1_2:73354696-73354715 Msa0091210:intron 80.0%
! CGCGGTAAGCGGGCGCGACG+CGG - chr1_2:73354740-73354759 Msa0091210:intron 80.0%
! GCGGTAAGCGGGCGCGACGC+GGG - chr1_2:73354741-73354760 Msa0091210:intron 80.0%
! AACGCGGCGCGATCGCGGCG+CGG + chr1_2:73355167-73355186 None:intergenic 80.0%
! GGCGCGATCGCGGCGCGGAG+CGG + chr1_2:73355162-73355181 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 73351246 73358615 73351246 ID=Msa0091210;Name=Msa0091210
chr1_2 mRNA 73351246 73358615 73351246 ID=Msa0091210-mRNA-1;Parent=Msa0091210;Name=Msa0091210-mRNA-1;_AED=0.13;_eAED=0.13;_QI=86|1|1|1|0.92|0.93|15|590|489
chr1_2 exon 73351246 73352021 73351246 ID=Msa0091210-mRNA-1:exon:25646;Parent=Msa0091210-mRNA-1
chr1_2 exon 73352120 73352203 73352120 ID=Msa0091210-mRNA-1:exon:25645;Parent=Msa0091210-mRNA-1
chr1_2 exon 73352321 73352374 73352321 ID=Msa0091210-mRNA-1:exon:25644;Parent=Msa0091210-mRNA-1
chr1_2 exon 73352487 73352534 73352487 ID=Msa0091210-mRNA-1:exon:25643;Parent=Msa0091210-mRNA-1
chr1_2 exon 73352946 73353028 73352946 ID=Msa0091210-mRNA-1:exon:25642;Parent=Msa0091210-mRNA-1
chr1_2 exon 73353123 73353273 73353123 ID=Msa0091210-mRNA-1:exon:25641;Parent=Msa0091210-mRNA-1
chr1_2 exon 73353500 73353637 73353500 ID=Msa0091210-mRNA-1:exon:25640;Parent=Msa0091210-mRNA-1
chr1_2 exon 73354220 73354351 73354220 ID=Msa0091210-mRNA-1:exon:25639;Parent=Msa0091210-mRNA-1
chr1_2 exon 73355449 73355657 73355449 ID=Msa0091210-mRNA-1:exon:25638;Parent=Msa0091210-mRNA-1
chr1_2 exon 73355748 73355859 73355748 ID=Msa0091210-mRNA-1:exon:25637;Parent=Msa0091210-mRNA-1
chr1_2 exon 73356685 73356744 73356685 ID=Msa0091210-mRNA-1:exon:25636;Parent=Msa0091210-mRNA-1
chr1_2 exon 73357020 73357118 73357020 ID=Msa0091210-mRNA-1:exon:25635;Parent=Msa0091210-mRNA-1
chr1_2 exon 73357220 73357275 73357220 ID=Msa0091210-mRNA-1:exon:25634;Parent=Msa0091210-mRNA-1
chr1_2 exon 73357510 73357574 73357510 ID=Msa0091210-mRNA-1:exon:25633;Parent=Msa0091210-mRNA-1
chr1_2 exon 73358537 73358615 73358537 ID=Msa0091210-mRNA-1:exon:25632;Parent=Msa0091210-mRNA-1
chr1_2 five_prime_UTR 73358537 73358615 73358537 ID=Msa0091210-mRNA-1:five_prime_utr;Parent=Msa0091210-mRNA-1
chr1_2 five_prime_UTR 73357568 73357574 73357568 ID=Msa0091210-mRNA-1:five_prime_utr;Parent=Msa0091210-mRNA-1
chr1_2 CDS 73357510 73357567 73357510 ID=Msa0091210-mRNA-1:cds;Parent=Msa0091210-mRNA-1
chr1_2 CDS 73357220 73357275 73357220 ID=Msa0091210-mRNA-1:cds;Parent=Msa0091210-mRNA-1
chr1_2 CDS 73357020 73357118 73357020 ID=Msa0091210-mRNA-1:cds;Parent=Msa0091210-mRNA-1
chr1_2 CDS 73356685 73356744 73356685 ID=Msa0091210-mRNA-1:cds;Parent=Msa0091210-mRNA-1
chr1_2 CDS 73355748 73355859 73355748 ID=Msa0091210-mRNA-1:cds;Parent=Msa0091210-mRNA-1
chr1_2 CDS 73355449 73355657 73355449 ID=Msa0091210-mRNA-1:cds;Parent=Msa0091210-mRNA-1
chr1_2 CDS 73354220 73354351 73354220 ID=Msa0091210-mRNA-1:cds;Parent=Msa0091210-mRNA-1
chr1_2 CDS 73353500 73353637 73353500 ID=Msa0091210-mRNA-1:cds;Parent=Msa0091210-mRNA-1
chr1_2 CDS 73353123 73353273 73353123 ID=Msa0091210-mRNA-1:cds;Parent=Msa0091210-mRNA-1
chr1_2 CDS 73352946 73353028 73352946 ID=Msa0091210-mRNA-1:cds;Parent=Msa0091210-mRNA-1
chr1_2 CDS 73352487 73352534 73352487 ID=Msa0091210-mRNA-1:cds;Parent=Msa0091210-mRNA-1
chr1_2 CDS 73352321 73352374 73352321 ID=Msa0091210-mRNA-1:cds;Parent=Msa0091210-mRNA-1
chr1_2 CDS 73352120 73352203 73352120 ID=Msa0091210-mRNA-1:cds;Parent=Msa0091210-mRNA-1
chr1_2 CDS 73351836 73352021 73351836 ID=Msa0091210-mRNA-1:cds;Parent=Msa0091210-mRNA-1
chr1_2 three_prime_UTR 73351246 73351835 73351246 ID=Msa0091210-mRNA-1:three_prime_utr;Parent=Msa0091210-mRNA-1
Gene Sequence

>Msa0091210

ATGGGTGTGGCTCAGAATGCTAGCGACAATGACGACGGCACCTTGGAGATAGGAATGGAATACAGGACTGTGTCTGGAGTTGCCGGACCATTGGTCATTCTTGAGAAAGTGAAGGGACCCAAATATCAAGAGATTGTCAATATTCGTTTAGGCGATGGAACTACCCGGCGTGGACAAGTTCTCGAGGTTGATGGCGAAAAGGCTGTTGTTCAGGTATTTGAAGGTACATCTGGGATTGACAATAAATTTACGACCGTACAGTTTACTGGAGAGGTGTTAAAAACTCCTGTATCACTGGACATGCTTGGTCGGATATTTAACGGTTCTGGAAAACCAATTGACAATGGTCCGCCAATTTTACCTGAGGCTTACTTGGATATATCAGGAAGTTCCATCAACCCTAGTGAGAGAACCTATCCCGAGGAGATGATACAGACTGGAATATCTACAATTGACGTCATGAATTCTATTGCTAGAGGTCAAAAGATCCCTCTATTTTCAGCTGCCGGTCTCCCCCATAATGAAATTGCTGCACAGATTTGTCGTCAAGCTGGCTTAGTCAAGCGACTAGAGAAGTCTGATAATCTTCTTGAGGGAGGAGGAGAAGACGACAATTTTGCCATTGTTTTTGCAGCTATGGGAGTTAACATGGAGACTGCACAGTTTTTCAAGCGTGACTTTGAGGAGAACGGCTCAATGGAGAGAGTGACCCTTTTCCTTAATTTGGCAAATGATCCTACAATTGAACGTATTATCACTCCTCGTATTGCTCTTACTACTGCTGAATATCTGGCGTATGAATGTGGCAAGCATGTTCTCGTGATACTCACAGATATGAGTTCTTATGCTGATGCTCTTCGTGAGGTATCTGCTGCCAGAGAAGAGGTGCCAGGAAGACGTGGTTATCCTGGTTATATGTATACAGATCTTGCAACAATTTATGAACGTGCCGGAAGAATTGAGGGGCGTAAAGGCTCAATTACCCAAATTCCAATTCTAACCATGCCAAATGATGATATTACACATCCAACTCCTGATCTTACCGGATATATTACGGAGGGGCAGATATACATCGATAGGCAGTTGCATAATAGACAGATATACCCACCAATCAATGTTCTTCCATCACTATCTCGGTTGATGAAGAGTGCTATTGGGGAGGGAATGACTAGAAAGGATCATTCTGATGTGTCCAACCAGCTGTATGCAAATTATGCCATTGGAAAGGATGTCCAGGCAATGAAAGCTGTTGTTGGAGAAGAAGCACTTTCATCTGAGGACCTGTTGTATCTGGAATTTCTGGACAAGTTTGAGAGGAAGTTTGTTGCCCAGGGAGCCTACGACACCCGCAATATATTCCAGTCTCTAGATCTTGCATGGACCTTACTCCGGATTTTCCCCCGTGAACTTCTTCATCGTATACCAGCCAAGACTCTTGACCAGTTTTACAGCCGAGATGCTGGTAATTGA
Protein sequence

>Msa0091210

MGVAQNASDNDDGTLEIGMEYRTVSGVAGPLVILEKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSDNLLEGGGEDDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQFYSRDAGN*