Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0336600 | XP_013464986.1 | 95.541 | 471 | 21 | 0 | 1 | 471 | 1 | 471 | 0.0 | 906 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0125600 | Msa0336600 | 0.800663 | 1.296608e-48 | -8.615850e-47 |
| Msa0269240 | Msa0336600 | 0.803715 | 3.054531e-49 | -8.615850e-47 |
| Msa0336600 | Msa0622850 | 0.975624 | 2.698622e-140 | -8.615850e-47 |
| Msa0336600 | Msa1104130 | 0.812907 | 3.347504e-51 | -8.615850e-47 |
| Msa0336600 | Msa1377230 | 0.943275 | 1.614660e-102 | -8.615850e-47 |
| Msa0336600 | Msa1387480 | 0.804542 | 2.054675e-49 | -8.615850e-47 |
| Msa0336600 | Msa1441450 | 0.825942 | 3.560355e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0336600 | MtrunA17_Chr2g0322991 | 95.137 | 473 | 21 | 1 | 1 | 471 | 1 | 473 | 0.0 | 901 |
| Msa0336600 | MtrunA17_Chr4g0023991 | 63.048 | 479 | 153 | 7 | 6 | 471 | 9 | 476 | 0.0 | 574 |
| Msa0336600 | MtrunA17_Chr4g0024001 | 53.846 | 416 | 178 | 6 | 57 | 470 | 74 | 477 | 6.63e-158 | 456 |
| Msa0336600 | MtrunA17_Chr3g0112211 | 43.437 | 419 | 219 | 7 | 56 | 468 | 81 | 487 | 1.01e-120 | 362 |
| Msa0336600 | MtrunA17_Chr2g0327551 | 42.389 | 427 | 226 | 9 | 50 | 467 | 38 | 453 | 9.00e-114 | 342 |
| Msa0336600 | MtrunA17_Chr8g0348511 | 39.516 | 496 | 263 | 10 | 1 | 468 | 1 | 487 | 2.23e-113 | 343 |
| Msa0336600 | MtrunA17_Chr8g0387371 | 41.549 | 426 | 232 | 9 | 50 | 467 | 98 | 514 | 3.05e-111 | 338 |
| Msa0336600 | MtrunA17_Chr7g0239421 | 42.993 | 421 | 218 | 9 | 55 | 462 | 90 | 501 | 5.00e-111 | 337 |
| Msa0336600 | MtrunA17_Chr4g0030331 | 45.404 | 359 | 183 | 7 | 52 | 406 | 102 | 451 | 1.00e-105 | 323 |
| Msa0336600 | MtrunA17_Chr5g0395861 | 35.637 | 463 | 250 | 10 | 33 | 462 | 84 | 531 | 1.40e-90 | 285 |
| Msa0336600 | MtrunA17_Chr7g0248241 | 43.494 | 269 | 123 | 6 | 10 | 260 | 33 | 290 | 8.50e-66 | 214 |
| Msa0336600 | MtrunA17_Chr5g0397301 | 49.763 | 211 | 98 | 3 | 52 | 261 | 77 | 280 | 9.35e-66 | 213 |
| Msa0336600 | MtrunA17_Chr5g0397311 | 33.476 | 233 | 146 | 4 | 240 | 467 | 3 | 231 | 1.50e-36 | 134 |
| Msa0336600 | MtrunA17_Chr7g0248231 | 38.596 | 171 | 97 | 4 | 262 | 425 | 4 | 173 | 7.59e-32 | 120 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0336600 | AT1G05280.1 | 51.717 | 466 | 197 | 10 | 31 | 471 | 28 | 490 | 1.48e-164 | 474 |
| Msa0336600 | AT4G15240.1 | 53.938 | 419 | 180 | 6 | 57 | 471 | 78 | 487 | 5.48e-153 | 444 |
| Msa0336600 | AT1G05280.2 | 51.636 | 428 | 183 | 8 | 31 | 437 | 28 | 452 | 2.26e-150 | 437 |
| Msa0336600 | AT1G01570.1 | 41.597 | 476 | 237 | 11 | 25 | 467 | 5 | 472 | 2.06e-118 | 355 |
| Msa0336600 | AT1G01570.2 | 41.597 | 476 | 237 | 11 | 25 | 467 | 36 | 503 | 1.06e-117 | 355 |
| Msa0336600 | AT5G41460.1 | 41.805 | 421 | 227 | 7 | 57 | 468 | 110 | 521 | 8.42e-113 | 343 |
| Msa0336600 | AT2G37730.1 | 42.067 | 416 | 225 | 8 | 54 | 460 | 93 | 501 | 7.42e-112 | 340 |
| Msa0336600 | AT4G11350.1 | 40.181 | 443 | 242 | 9 | 38 | 467 | 71 | 503 | 2.01e-111 | 338 |
| Msa0336600 | AT4G23490.1 | 41.232 | 422 | 229 | 7 | 57 | 467 | 109 | 522 | 3.27e-111 | 338 |
| Msa0336600 | AT4G00295.1 | 43.276 | 409 | 203 | 9 | 8 | 393 | 14 | 416 | 1.25e-105 | 322 |
| Msa0336600 | AT3G11420.1 | 38.688 | 442 | 253 | 9 | 38 | 468 | 71 | 505 | 3.80e-104 | 320 |
| Msa0336600 | AT1G07850.1 | 41.866 | 418 | 228 | 6 | 57 | 467 | 123 | 532 | 8.27e-102 | 315 |
| Msa0336600 | AT5G12460.1 | 38.642 | 427 | 239 | 7 | 50 | 468 | 29 | 440 | 9.62e-99 | 304 |
| Msa0336600 | AT1G33250.1 | 37.143 | 420 | 236 | 7 | 58 | 462 | 130 | 536 | 8.49e-95 | 297 |
| Msa0336600 | AT4G11350.2 | 46.983 | 232 | 106 | 6 | 38 | 261 | 71 | 293 | 1.12e-63 | 209 |
Find 73 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAGATATTCTCATCTTTA+TGG | 0.124890 | 2_4:-56026540 | Msa0336600:CDS |
| GGGGAACATCTTTGGTTTAT+TGG | 0.179164 | 2_4:-56026195 | Msa0336600:CDS |
| ACATCACAACACTGCCTTCT+TGG | 0.232333 | 2_4:+56025413 | None:intergenic |
| AGTGAAATTAATTTGGTTAC+AGG | 0.243417 | 2_4:+56027200 | None:intergenic |
| TCGTTTGAACAATTATAAAA+AGG | 0.251342 | 2_4:+56025768 | None:intergenic |
| AGATGAGAGTGAAATTAATT+TGG | 0.266326 | 2_4:+56027193 | None:intergenic |
| AAGGATAACAAGGGACTTAA+TGG | 0.285506 | 2_4:+56026164 | None:intergenic |
| AAGATTGCATCAGTAATATC+TGG | 0.291943 | 2_4:+56026134 | None:intergenic |
| CGTAGCAAACAGTTTGTTGT+AGG | 0.303763 | 2_4:+56026042 | None:intergenic |
| TATGAAGGGTCTCAAGCTTT+TGG | 0.308499 | 2_4:-56026648 | Msa0336600:CDS |
| CTGGTAAAAGCACATTGTTT+TGG | 0.309800 | 2_4:+56025964 | None:intergenic |
| GAACAGAATCATCACTATTA+AGG | 0.324638 | 2_4:+56026910 | None:intergenic |
| GTACTATGTTGGAGCTTATT+CGG | 0.326012 | 2_4:-56026676 | Msa0336600:CDS |
| GTGGAAAATCATGGCCTAAT+AGG | 0.338730 | 2_4:-56027019 | Msa0336600:CDS |
| CAAGACATCGTCGAAGAATC+TGG | 0.341468 | 2_4:-56025745 | Msa0336600:CDS |
| AATTGAATCATTCAGATGTT+AGG | 0.344242 | 2_4:-56026782 | Msa0336600:CDS |
| CTAAATATGATCATAGGCTT+TGG | 0.364697 | 2_4:-56026698 | Msa0336600:CDS |
| GCATTACCTGTTTGCTATCA+AGG | 0.365649 | 2_4:+56025691 | None:intergenic |
| ATTTATTACCTGGTGAAAAC+CGG | 0.376989 | 2_4:+56026458 | None:intergenic |
| CACGGACGGTTTCAGTGTCA+TGG | 0.380415 | 2_4:-56026007 | Msa0336600:CDS |
| AATTAATTTGGTTACAGGTT+TGG | 0.387469 | 2_4:+56027205 | None:intergenic |
| GCTAATGATTCCATCTTTAC+CGG | 0.391353 | 2_4:+56025803 | None:intergenic |
| GATGTTAGGTGGTATGTGTT+TGG | 0.412774 | 2_4:-56026768 | Msa0336600:CDS |
| TCTTGCACTCTAAGAACATC+TGG | 0.423499 | 2_4:+56025945 | None:intergenic |
| TTGGATTATAGGTTGATTTG+AGG | 0.424875 | 2_4:-56026217 | Msa0336600:intron |
| TGCATAGCAGAACTTGGTGT+TGG | 0.429174 | 2_4:-56026495 | Msa0336600:CDS |
| TGATGTGGTAAAGAATAGTA+TGG | 0.431239 | 2_4:+56027136 | None:intergenic |
| ACAAGATGATTAACATTGGT+TGG | 0.436739 | 2_4:+56027059 | None:intergenic |
| TTCTCTTGCATAGCAGAACT+TGG | 0.451670 | 2_4:-56026501 | Msa0336600:CDS |
| TGGATTATAGGTTGATTTGA+GGG | 0.458285 | 2_4:-56026216 | Msa0336600:intron |
| CACTTTCTAAATATGATCAT+AGG | 0.459356 | 2_4:-56026704 | Msa0336600:CDS |
| ACGGACGGTTTCAGTGTCAT+GGG | 0.470966 | 2_4:-56026006 | Msa0336600:CDS |
| AGTAATATCTGGGTGATGTA+AGG | 0.472243 | 2_4:+56026145 | None:intergenic |
| CATAGGCTTTGGTACTATGT+TGG | 0.476035 | 2_4:-56026687 | Msa0336600:CDS |
| ACTCTAACTCTGATCAACTA+AGG | 0.476907 | 2_4:-56025385 | Msa0336600:CDS |
| AGTGTCTTAACAAGATTCTC+AGG | 0.478782 | 2_4:+56026723 | None:intergenic |
| AATGTATCTACCGGTAAAGA+TGG | 0.484588 | 2_4:-56025813 | Msa0336600:CDS |
| GTTAGACCTTGATAGCAAAC+AGG | 0.492101 | 2_4:-56025697 | Msa0336600:intron |
| GCTTATTCGGAGAATTATGA+AGG | 0.496075 | 2_4:-56026663 | Msa0336600:CDS |
| AAACTGTTTGCTACGATAGA+CGG | 0.526094 | 2_4:-56026034 | Msa0336600:CDS |
| ATCTTTATGGAAGTGATGCT+AGG | 0.526264 | 2_4:-56026527 | Msa0336600:CDS |
| TTTATTACCTGGTGAAAACC+GGG | 0.543349 | 2_4:+56026459 | None:intergenic |
| TCTTCAGAGACACAAATTTG+AGG | 0.546907 | 2_4:+56026888 | None:intergenic |
| AAAATATGCCAAACTTTGGT+GGG | 0.551639 | 2_4:-56026994 | Msa0336600:CDS |
| TCTTTATGGAAGTGATGCTA+GGG | 0.553538 | 2_4:-56026526 | Msa0336600:CDS |
| TGCAAGAAACATTCAAGCCA+TGG | 0.553702 | 2_4:-56025929 | Msa0336600:CDS |
| CTCTAACTCTGATCAACTAA+GGG | 0.555856 | 2_4:-56025384 | Msa0336600:CDS |
| TTGCATCAAGTGGAAAATCA+TGG | 0.559886 | 2_4:-56027028 | Msa0336600:CDS |
| TTGGTTGGATCAGATTCAGT+AGG | 0.565623 | 2_4:+56027074 | None:intergenic |
| GATTATAGGTTGATTTGAGG+GGG | 0.570849 | 2_4:-56026214 | Msa0336600:intron |
| TATCTAGACAATGTATCTAC+CGG | 0.573162 | 2_4:-56025822 | Msa0336600:CDS |
| TTTAGTTGCAGACTCCAAGA+AGG | 0.573265 | 2_4:-56025427 | Msa0336600:intron |
| GGATTATAGGTTGATTTGAG+GGG | 0.576528 | 2_4:-56026215 | Msa0336600:intron |
| AAGGCAGTGTTGTGATGTGT+TGG | 0.577881 | 2_4:-56025408 | Msa0336600:CDS |
| AAGATAGTAACAATTAACAT+TGG | 0.584281 | 2_4:-56027113 | Msa0336600:CDS |
| AGATTGCATCAGTAATATCT+GGG | 0.584721 | 2_4:+56026135 | None:intergenic |
| TAATGATTTCATGACTAACA+AGG | 0.590494 | 2_4:+56027235 | None:intergenic |
| AGAAACATTCAAGCCATGGA+AGG | 0.593946 | 2_4:-56025925 | Msa0336600:CDS |
| ATCGCTGATCTCAAACCACC+TGG | 0.602809 | 2_4:+56026837 | None:intergenic |
| AATGATTTCATGACTAACAA+GGG | 0.607221 | 2_4:+56027236 | None:intergenic |
| AATTGTTACTATCTTTGATG+TGG | 0.613033 | 2_4:+56027121 | None:intergenic |
| TGAATCATTCAGATGTTAGG+TGG | 0.614320 | 2_4:-56026779 | Msa0336600:CDS |
| TGGGTGATGTAAGGATAACA+AGG | 0.618676 | 2_4:+56026154 | None:intergenic |
| CGGACGGTTTCAGTGTCATG+GGG | 0.643044 | 2_4:-56026005 | Msa0336600:CDS |
| CTTATTCGGAGAATTATGAA+GGG | 0.653583 | 2_4:-56026662 | Msa0336600:CDS |
| AACTACACATATAGACCAGG+TGG | 0.655770 | 2_4:-56026852 | Msa0336600:CDS |
| CTTTCACAACACGTGCCACG+CGG | 0.665049 | 2_4:+56026814 | None:intergenic |
| GTTGGATTAACATATGAACC+CGG | 0.669948 | 2_4:-56026477 | Msa0336600:CDS |
| GAATCTGGAAGTGATCAAAG+TGG | 0.686054 | 2_4:-56025730 | Msa0336600:CDS |
| TTTAACTACACATATAGACC+AGG | 0.706253 | 2_4:-56026855 | Msa0336600:CDS |
| GATTTCATGACTAACAAGGG+AGG | 0.712821 | 2_4:+56027239 | None:intergenic |
| GGGTGATGTAAGGATAACAA+GGG | 0.728977 | 2_4:+56026155 | None:intergenic |
| TTTGAGATCAGCGATCCGCG+TGG | 0.777646 | 2_4:-56026829 | Msa0336600:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGTAAATTATTTATTACC+TGG | + | chr2_4:56026225-56026244 | None:intergenic | 15.0% |
| !!! | TTTGATTTAATGAATTTTGT+TGG | - | chr2_4:56026242-56026261 | Msa0336600:intron | 15.0% |
| !!! | AAAATTTAGTCTCTAAAATT+AGG | + | chr2_4:56026385-56026404 | None:intergenic | 15.0% |
| !! | TATTAATGTGATTATGAAAT+TGG | - | chr2_4:56026434-56026453 | Msa0336600:intron | 15.0% |
| !!! | ATTTTGAATTTGTCATATTA+GGG | + | chr2_4:56026562-56026581 | None:intergenic | 15.0% |
| !!! | AATATGGTTTTTTACATTTT+AGG | - | chr2_4:56027163-56027182 | Msa0336600:CDS | 15.0% |
| !! | AAAGTAAATTATTTATTACC+TGG | + | chr2_4:56026225-56026244 | None:intergenic | 15.0% |
| !!! | TTTGATTTAATGAATTTTGT+TGG | - | chr2_4:56026242-56026261 | Msa0336600:intron | 15.0% |
| !!! | AAAATTTAGTCTCTAAAATT+AGG | + | chr2_4:56026385-56026404 | None:intergenic | 15.0% |
| !! | TATTAATGTGATTATGAAAT+TGG | - | chr2_4:56026434-56026453 | Msa0336600:intron | 15.0% |
| !!! | ATTTTGAATTTGTCATATTA+GGG | + | chr2_4:56026562-56026581 | None:intergenic | 15.0% |
| !!! | AATATGGTTTTTTACATTTT+AGG | - | chr2_4:56027163-56027182 | Msa0336600:CDS | 15.0% |
| !! | AAGATAGTAACAATTAACAT+TGG | - | chr2_4:56025557-56025576 | Msa0336600:intron | 20.0% |
| !! | AAAAACAAGATGATTAACAT+TGG | + | chr2_4:56025618-56025637 | None:intergenic | 20.0% |
| !!! | AATGTTAATCATCTTGTTTT+TGG | - | chr2_4:56025617-56025636 | Msa0336600:intron | 20.0% |
| !! | ACATTAATAGAGGATAAATT+TGG | + | chr2_4:56026423-56026442 | None:intergenic | 20.0% |
| !! | TTTCATAATCACATTAATAG+AGG | + | chr2_4:56026433-56026452 | None:intergenic | 20.0% |
| !! | TGATTATGAAATTGGATTAT+AGG | - | chr2_4:56026442-56026461 | Msa0336600:intron | 20.0% |
| !!! | GATTTTGAATTTGTCATATT+AGG | + | chr2_4:56026563-56026582 | None:intergenic | 20.0% |
| !!! | AAATTTTAGGTCTTTTACAA+GGG | + | chr2_4:56026826-56026845 | None:intergenic | 20.0% |
| !!! | AAAATTTTAGGTCTTTTACA+AGG | + | chr2_4:56026827-56026846 | None:intergenic | 20.0% |
| !!! | TTGTCTAGATAGAAAATTTT+AGG | + | chr2_4:56026839-56026858 | None:intergenic | 20.0% |
| !! | TCGTTTGAACAATTATAAAA+AGG | + | chr2_4:56026905-56026924 | None:intergenic | 20.0% |
| !!! | TTTAAAATCATGCTGAAATA+TGG | - | chr2_4:56027147-56027166 | Msa0336600:CDS | 20.0% |
| !! | CTAATTCATAAACTATACTT+TGG | - | chr2_4:56027218-56027237 | Msa0336600:CDS | 20.0% |
| !! | AAGATAGTAACAATTAACAT+TGG | - | chr2_4:56025557-56025576 | Msa0336600:intron | 20.0% |
| !! | AAAAACAAGATGATTAACAT+TGG | + | chr2_4:56025618-56025637 | None:intergenic | 20.0% |
| !!! | AATGTTAATCATCTTGTTTT+TGG | - | chr2_4:56025617-56025636 | Msa0336600:intron | 20.0% |
| !! | ACATTAATAGAGGATAAATT+TGG | + | chr2_4:56026423-56026442 | None:intergenic | 20.0% |
| !! | TTTCATAATCACATTAATAG+AGG | + | chr2_4:56026433-56026452 | None:intergenic | 20.0% |
| !! | TGATTATGAAATTGGATTAT+AGG | - | chr2_4:56026442-56026461 | Msa0336600:intron | 20.0% |
| !!! | GATTTTGAATTTGTCATATT+AGG | + | chr2_4:56026563-56026582 | None:intergenic | 20.0% |
| !!! | AAATTTTAGGTCTTTTACAA+GGG | + | chr2_4:56026826-56026845 | None:intergenic | 20.0% |
| !!! | AAAATTTTAGGTCTTTTACA+AGG | + | chr2_4:56026827-56026846 | None:intergenic | 20.0% |
| !!! | TTGTCTAGATAGAAAATTTT+AGG | + | chr2_4:56026839-56026858 | None:intergenic | 20.0% |
| !! | TCGTTTGAACAATTATAAAA+AGG | + | chr2_4:56026905-56026924 | None:intergenic | 20.0% |
| !!! | TTTAAAATCATGCTGAAATA+TGG | - | chr2_4:56027147-56027166 | Msa0336600:CDS | 20.0% |
| !! | CTAATTCATAAACTATACTT+TGG | - | chr2_4:56027218-56027237 | Msa0336600:CDS | 20.0% |
| ! | AATGATTTCATGACTAACAA+GGG | + | chr2_4:56025437-56025456 | None:intergenic | 25.0% |
| ! | TAATGATTTCATGACTAACA+AGG | + | chr2_4:56025438-56025457 | None:intergenic | 25.0% |
| !! | AATTAATTTGGTTACAGGTT+TGG | + | chr2_4:56025468-56025487 | None:intergenic | 25.0% |
| !! | AGTGAAATTAATTTGGTTAC+AGG | + | chr2_4:56025473-56025492 | None:intergenic | 25.0% |
| ! | AGATGAGAGTGAAATTAATT+TGG | + | chr2_4:56025480-56025499 | None:intergenic | 25.0% |
| ! | AATTGTTACTATCTTTGATG+TGG | + | chr2_4:56025552-56025571 | None:intergenic | 25.0% |
| !!! | TTGGCATATTTTTTCCTATT+AGG | + | chr2_4:56025668-56025687 | None:intergenic | 25.0% |
| ! | AATTGAATCATTCAGATGTT+AGG | - | chr2_4:56025888-56025907 | Msa0336600:CDS | 25.0% |
| ! | CACTTTCTAAATATGATCAT+AGG | - | chr2_4:56025966-56025985 | Msa0336600:CDS | 25.0% |
| !!! | TTTAGCTAATGTTTTAGCTA+AGG | - | chr2_4:56026090-56026109 | Msa0336600:CDS | 25.0% |
| ! | GAAAGATATTCTCATCTTTA+TGG | - | chr2_4:56026130-56026149 | Msa0336600:CDS | 25.0% |
| !! | CTAATTAGTCTCCAAAATTT+AGG | - | chr2_4:56026326-56026345 | Msa0336600:intron | 25.0% |
| !!! | ACATTCATGGTTTTAAATTG+TGG | - | chr2_4:56027015-56027034 | Msa0336600:CDS | 25.0% |
| !! | CACATTTTACTGCAATATAA+AGG | + | chr2_4:56027053-56027072 | None:intergenic | 25.0% |
| !! | TTGACATGTAAAGAATTTTG+TGG | + | chr2_4:56027102-56027121 | None:intergenic | 25.0% |
| !! | TTCAGCATGATTTTAAATTG+CGG | + | chr2_4:56027144-56027163 | None:intergenic | 25.0% |
| !!! | TTAGGATGATGTTTTTACTT+TGG | - | chr2_4:56027181-56027200 | Msa0336600:CDS | 25.0% |
| ! | AATGATTTCATGACTAACAA+GGG | + | chr2_4:56025437-56025456 | None:intergenic | 25.0% |
| ! | TAATGATTTCATGACTAACA+AGG | + | chr2_4:56025438-56025457 | None:intergenic | 25.0% |
| !! | AATTAATTTGGTTACAGGTT+TGG | + | chr2_4:56025468-56025487 | None:intergenic | 25.0% |
| !! | AGTGAAATTAATTTGGTTAC+AGG | + | chr2_4:56025473-56025492 | None:intergenic | 25.0% |
| ! | AGATGAGAGTGAAATTAATT+TGG | + | chr2_4:56025480-56025499 | None:intergenic | 25.0% |
| ! | AATTGTTACTATCTTTGATG+TGG | + | chr2_4:56025552-56025571 | None:intergenic | 25.0% |
| !!! | TTGGCATATTTTTTCCTATT+AGG | + | chr2_4:56025668-56025687 | None:intergenic | 25.0% |
| ! | AATTGAATCATTCAGATGTT+AGG | - | chr2_4:56025888-56025907 | Msa0336600:CDS | 25.0% |
| ! | CACTTTCTAAATATGATCAT+AGG | - | chr2_4:56025966-56025985 | Msa0336600:CDS | 25.0% |
| !!! | TTTAGCTAATGTTTTAGCTA+AGG | - | chr2_4:56026090-56026109 | Msa0336600:CDS | 25.0% |
| ! | GAAAGATATTCTCATCTTTA+TGG | - | chr2_4:56026130-56026149 | Msa0336600:CDS | 25.0% |
| !! | CTAATTAGTCTCCAAAATTT+AGG | - | chr2_4:56026326-56026345 | Msa0336600:intron | 25.0% |
| !!! | ACATTCATGGTTTTAAATTG+TGG | - | chr2_4:56027015-56027034 | Msa0336600:CDS | 25.0% |
| !! | CACATTTTACTGCAATATAA+AGG | + | chr2_4:56027053-56027072 | None:intergenic | 25.0% |
| !! | TTGACATGTAAAGAATTTTG+TGG | + | chr2_4:56027102-56027121 | None:intergenic | 25.0% |
| !! | TTCAGCATGATTTTAAATTG+CGG | + | chr2_4:56027144-56027163 | None:intergenic | 25.0% |
| !!! | TTAGGATGATGTTTTTACTT+TGG | - | chr2_4:56027181-56027200 | Msa0336600:CDS | 25.0% |
| TGATGTGGTAAAGAATAGTA+TGG | + | chr2_4:56025537-56025556 | None:intergenic | 30.0% | |
| ACAAGATGATTAACATTGGT+TGG | + | chr2_4:56025614-56025633 | None:intergenic | 30.0% | |
| GGAAAAAATATGCCAAACTT+TGG | - | chr2_4:56025672-56025691 | Msa0336600:intron | 30.0% | |
| AAAAATATGCCAAACTTTGG+TGG | - | chr2_4:56025675-56025694 | Msa0336600:intron | 30.0% | |
| AAAATATGCCAAACTTTGGT+GGG | - | chr2_4:56025676-56025695 | Msa0336600:intron | 30.0% | |
| !! | TATGAAAGGTTGTGTTTTTG+TGG | - | chr2_4:56025706-56025725 | Msa0336600:CDS | 30.0% |
| GAACAGAATCATCACTATTA+AGG | + | chr2_4:56025763-56025782 | None:intergenic | 30.0% | |
| TTTAACTACACATATAGACC+AGG | - | chr2_4:56025815-56025834 | Msa0336600:CDS | 30.0% | |
| CTAAATATGATCATAGGCTT+TGG | - | chr2_4:56025972-56025991 | Msa0336600:CDS | 30.0% | |
| CTTATTCGGAGAATTATGAA+GGG | - | chr2_4:56026008-56026027 | Msa0336600:CDS | 30.0% | |
| ATTTATTACCTGGTGAAAAC+CGG | + | chr2_4:56026215-56026234 | None:intergenic | 30.0% | |
| ! | ACTCCATATATTGGTGATTT+AGG | - | chr2_4:56026267-56026286 | Msa0336600:intron | 30.0% |
| GTTCCTAAATCACCAATATA+TGG | + | chr2_4:56026273-56026292 | None:intergenic | 30.0% | |
| !! | TTGGATTATAGGTTGATTTG+AGG | - | chr2_4:56026453-56026472 | Msa0336600:intron | 30.0% |
| !! | TGGATTATAGGTTGATTTGA+GGG | - | chr2_4:56026454-56026473 | Msa0336600:intron | 30.0% |
| AGATTGCATCAGTAATATCT+GGG | + | chr2_4:56026538-56026557 | None:intergenic | 30.0% | |
| AAGATTGCATCAGTAATATC+TGG | + | chr2_4:56026539-56026558 | None:intergenic | 30.0% | |
| ATGGAAGGAAAAACAAGTTT+GGG | - | chr2_4:56026760-56026779 | Msa0336600:CDS | 30.0% | |
| TATCTAGACAATGTATCTAC+CGG | - | chr2_4:56026848-56026867 | Msa0336600:CDS | 30.0% | |
| GCAGTAAAATGTGAAAAATG+CGG | - | chr2_4:56027060-56027079 | Msa0336600:CDS | 30.0% | |
| TGATGTGGTAAAGAATAGTA+TGG | + | chr2_4:56025537-56025556 | None:intergenic | 30.0% | |
| ACAAGATGATTAACATTGGT+TGG | + | chr2_4:56025614-56025633 | None:intergenic | 30.0% | |
| GGAAAAAATATGCCAAACTT+TGG | - | chr2_4:56025672-56025691 | Msa0336600:intron | 30.0% | |
| AAAAATATGCCAAACTTTGG+TGG | - | chr2_4:56025675-56025694 | Msa0336600:intron | 30.0% | |
| AAAATATGCCAAACTTTGGT+GGG | - | chr2_4:56025676-56025695 | Msa0336600:intron | 30.0% | |
| !! | TATGAAAGGTTGTGTTTTTG+TGG | - | chr2_4:56025706-56025725 | Msa0336600:CDS | 30.0% |
| GAACAGAATCATCACTATTA+AGG | + | chr2_4:56025763-56025782 | None:intergenic | 30.0% | |
| TTTAACTACACATATAGACC+AGG | - | chr2_4:56025815-56025834 | Msa0336600:CDS | 30.0% | |
| CTAAATATGATCATAGGCTT+TGG | - | chr2_4:56025972-56025991 | Msa0336600:CDS | 30.0% | |
| CTTATTCGGAGAATTATGAA+GGG | - | chr2_4:56026008-56026027 | Msa0336600:CDS | 30.0% | |
| ATTTATTACCTGGTGAAAAC+CGG | + | chr2_4:56026215-56026234 | None:intergenic | 30.0% | |
| ! | ACTCCATATATTGGTGATTT+AGG | - | chr2_4:56026267-56026286 | Msa0336600:intron | 30.0% |
| GTTCCTAAATCACCAATATA+TGG | + | chr2_4:56026273-56026292 | None:intergenic | 30.0% | |
| !! | TTGGATTATAGGTTGATTTG+AGG | - | chr2_4:56026453-56026472 | Msa0336600:intron | 30.0% |
| !! | TGGATTATAGGTTGATTTGA+GGG | - | chr2_4:56026454-56026473 | Msa0336600:intron | 30.0% |
| AGATTGCATCAGTAATATCT+GGG | + | chr2_4:56026538-56026557 | None:intergenic | 30.0% | |
| AAGATTGCATCAGTAATATC+TGG | + | chr2_4:56026539-56026558 | None:intergenic | 30.0% | |
| ATGGAAGGAAAAACAAGTTT+GGG | - | chr2_4:56026760-56026779 | Msa0336600:CDS | 30.0% | |
| TATCTAGACAATGTATCTAC+CGG | - | chr2_4:56026848-56026867 | Msa0336600:CDS | 30.0% | |
| GCAGTAAAATGTGAAAAATG+CGG | - | chr2_4:56027060-56027079 | Msa0336600:CDS | 30.0% | |
| !!! | GTTTTTGGAATTGCATCAAG+TGG | - | chr2_4:56025632-56025651 | Msa0336600:intron | 35.0% |
| TTGCATCAAGTGGAAAATCA+TGG | - | chr2_4:56025642-56025661 | Msa0336600:intron | 35.0% | |
| ! | ATTTTTGTCCCACCAAAGTT+TGG | + | chr2_4:56025687-56025706 | None:intergenic | 35.0% |
| TGGTGGGACAAAAATATGAA+AGG | - | chr2_4:56025692-56025711 | Msa0336600:intron | 35.0% | |
| !!! | TTGTTGTCATTTTCTTCAGG+TGG | + | chr2_4:56025740-56025759 | None:intergenic | 35.0% |
| !!! | AGGTTGTTGTCATTTTCTTC+AGG | + | chr2_4:56025743-56025762 | None:intergenic | 35.0% |
| TCTTCAGAGACACAAATTTG+AGG | + | chr2_4:56025785-56025804 | None:intergenic | 35.0% | |
| TGAATCATTCAGATGTTAGG+TGG | - | chr2_4:56025891-56025910 | Msa0336600:CDS | 35.0% | |
| AGTGTCTTAACAAGATTCTC+AGG | + | chr2_4:56025950-56025969 | None:intergenic | 35.0% | |
| GTACTATGTTGGAGCTTATT+CGG | - | chr2_4:56025994-56026013 | Msa0336600:CDS | 35.0% | |
| GCTTATTCGGAGAATTATGA+AGG | - | chr2_4:56026007-56026026 | Msa0336600:CDS | 35.0% | |
| !!! | TCAAGCTTTTGGTTTTGGAA+TGG | - | chr2_4:56026033-56026052 | Msa0336600:CDS | 35.0% |
| !!! | TTTGGTTTTGGAATGGCTTT+TGG | - | chr2_4:56026040-56026059 | Msa0336600:CDS | 35.0% |
| ATCTTTATGGAAGTGATGCT+AGG | - | chr2_4:56026143-56026162 | Msa0336600:CDS | 35.0% | |
| TCTTTATGGAAGTGATGCTA+GGG | - | chr2_4:56026144-56026163 | Msa0336600:CDS | 35.0% | |
| GTTGGATTAACATATGAACC+CGG | - | chr2_4:56026193-56026212 | Msa0336600:CDS | 35.0% | |
| TTTATTACCTGGTGAAAACC+GGG | + | chr2_4:56026214-56026233 | None:intergenic | 35.0% | |
| !! | TTGTTGGTGACTCCATATAT+TGG | - | chr2_4:56026258-56026277 | Msa0336600:intron | 35.0% |
| ! | GTCTCCAAAATTTAGGATTC+CGG | - | chr2_4:56026333-56026352 | Msa0336600:intron | 35.0% |
| ! | GAATCCGGAATCCTAAATTT+TGG | + | chr2_4:56026340-56026359 | None:intergenic | 35.0% |
| !! | TAGTCTCTAAAATTAGGACG+CGG | + | chr2_4:56026379-56026398 | None:intergenic | 35.0% |
| !! | GGATTATAGGTTGATTTGAG+GGG | - | chr2_4:56026455-56026474 | Msa0336600:intron | 35.0% |
| !! | GATTATAGGTTGATTTGAGG+GGG | - | chr2_4:56026456-56026475 | Msa0336600:intron | 35.0% |
| AAGGATAACAAGGGACTTAA+TGG | + | chr2_4:56026509-56026528 | None:intergenic | 35.0% | |
| AGTAATATCTGGGTGATGTA+AGG | + | chr2_4:56026528-56026547 | None:intergenic | 35.0% | |
| ! | AAACTGTTTGCTACGATAGA+CGG | - | chr2_4:56026636-56026655 | Msa0336600:CDS | 35.0% |
| !! | CTGGTAAAAGCACATTGTTT+TGG | + | chr2_4:56026709-56026728 | None:intergenic | 35.0% |
| !! | CAAACTTGTTTTTCCTTCCA+TGG | + | chr2_4:56026761-56026780 | None:intergenic | 35.0% |
| CATGGAAGGAAAAACAAGTT+TGG | - | chr2_4:56026759-56026778 | Msa0336600:CDS | 35.0% | |
| AATGTATCTACCGGTAAAGA+TGG | - | chr2_4:56026857-56026876 | Msa0336600:CDS | 35.0% | |
| GCTAATGATTCCATCTTTAC+CGG | + | chr2_4:56026870-56026889 | None:intergenic | 35.0% | |
| !! | GTTTTAGACACTGACATTCA+TGG | - | chr2_4:56027002-56027021 | Msa0336600:CDS | 35.0% |
| ACTCTAACTCTGATCAACTA+AGG | - | chr2_4:56027285-56027304 | Msa0336600:five_prime_UTR | 35.0% | |
| CTCTAACTCTGATCAACTAA+GGG | - | chr2_4:56027286-56027305 | Msa0336600:five_prime_UTR | 35.0% | |
| !!! | GTTTTTGGAATTGCATCAAG+TGG | - | chr2_4:56025632-56025651 | Msa0336600:intron | 35.0% |
| TTGCATCAAGTGGAAAATCA+TGG | - | chr2_4:56025642-56025661 | Msa0336600:intron | 35.0% | |
| ! | ATTTTTGTCCCACCAAAGTT+TGG | + | chr2_4:56025687-56025706 | None:intergenic | 35.0% |
| TGGTGGGACAAAAATATGAA+AGG | - | chr2_4:56025692-56025711 | Msa0336600:intron | 35.0% | |
| !!! | TTGTTGTCATTTTCTTCAGG+TGG | + | chr2_4:56025740-56025759 | None:intergenic | 35.0% |
| !!! | AGGTTGTTGTCATTTTCTTC+AGG | + | chr2_4:56025743-56025762 | None:intergenic | 35.0% |
| TCTTCAGAGACACAAATTTG+AGG | + | chr2_4:56025785-56025804 | None:intergenic | 35.0% | |
| TGAATCATTCAGATGTTAGG+TGG | - | chr2_4:56025891-56025910 | Msa0336600:CDS | 35.0% | |
| AGTGTCTTAACAAGATTCTC+AGG | + | chr2_4:56025950-56025969 | None:intergenic | 35.0% | |
| GTACTATGTTGGAGCTTATT+CGG | - | chr2_4:56025994-56026013 | Msa0336600:CDS | 35.0% | |
| GCTTATTCGGAGAATTATGA+AGG | - | chr2_4:56026007-56026026 | Msa0336600:CDS | 35.0% | |
| !!! | TCAAGCTTTTGGTTTTGGAA+TGG | - | chr2_4:56026033-56026052 | Msa0336600:CDS | 35.0% |
| !!! | TTTGGTTTTGGAATGGCTTT+TGG | - | chr2_4:56026040-56026059 | Msa0336600:CDS | 35.0% |
| ATCTTTATGGAAGTGATGCT+AGG | - | chr2_4:56026143-56026162 | Msa0336600:CDS | 35.0% | |
| TCTTTATGGAAGTGATGCTA+GGG | - | chr2_4:56026144-56026163 | Msa0336600:CDS | 35.0% | |
| GTTGGATTAACATATGAACC+CGG | - | chr2_4:56026193-56026212 | Msa0336600:CDS | 35.0% | |
| TTTATTACCTGGTGAAAACC+GGG | + | chr2_4:56026214-56026233 | None:intergenic | 35.0% | |
| !! | TTGTTGGTGACTCCATATAT+TGG | - | chr2_4:56026258-56026277 | Msa0336600:intron | 35.0% |
| ! | GTCTCCAAAATTTAGGATTC+CGG | - | chr2_4:56026333-56026352 | Msa0336600:intron | 35.0% |
| ! | GAATCCGGAATCCTAAATTT+TGG | + | chr2_4:56026340-56026359 | None:intergenic | 35.0% |
| !! | TAGTCTCTAAAATTAGGACG+CGG | + | chr2_4:56026379-56026398 | None:intergenic | 35.0% |
| !! | GGATTATAGGTTGATTTGAG+GGG | - | chr2_4:56026455-56026474 | Msa0336600:intron | 35.0% |
| !! | GATTATAGGTTGATTTGAGG+GGG | - | chr2_4:56026456-56026475 | Msa0336600:intron | 35.0% |
| AAGGATAACAAGGGACTTAA+TGG | + | chr2_4:56026509-56026528 | None:intergenic | 35.0% | |
| AGTAATATCTGGGTGATGTA+AGG | + | chr2_4:56026528-56026547 | None:intergenic | 35.0% | |
| ! | AAACTGTTTGCTACGATAGA+CGG | - | chr2_4:56026636-56026655 | Msa0336600:CDS | 35.0% |
| !! | CTGGTAAAAGCACATTGTTT+TGG | + | chr2_4:56026709-56026728 | None:intergenic | 35.0% |
| !! | CAAACTTGTTTTTCCTTCCA+TGG | + | chr2_4:56026761-56026780 | None:intergenic | 35.0% |
| CATGGAAGGAAAAACAAGTT+TGG | - | chr2_4:56026759-56026778 | Msa0336600:CDS | 35.0% | |
| AATGTATCTACCGGTAAAGA+TGG | - | chr2_4:56026857-56026876 | Msa0336600:CDS | 35.0% | |
| GCTAATGATTCCATCTTTAC+CGG | + | chr2_4:56026870-56026889 | None:intergenic | 35.0% | |
| !! | GTTTTAGACACTGACATTCA+TGG | - | chr2_4:56027002-56027021 | Msa0336600:CDS | 35.0% |
| ACTCTAACTCTGATCAACTA+AGG | - | chr2_4:56027285-56027304 | Msa0336600:five_prime_UTR | 35.0% | |
| CTCTAACTCTGATCAACTAA+GGG | - | chr2_4:56027286-56027305 | Msa0336600:five_prime_UTR | 35.0% | |
| GATTTCATGACTAACAAGGG+AGG | + | chr2_4:56025434-56025453 | None:intergenic | 40.0% | |
| TTGGTTGGATCAGATTCAGT+AGG | + | chr2_4:56025599-56025618 | None:intergenic | 40.0% | |
| GTGGAAAATCATGGCCTAAT+AGG | - | chr2_4:56025651-56025670 | Msa0336600:intron | 40.0% | |
| AACTACACATATAGACCAGG+TGG | - | chr2_4:56025818-56025837 | Msa0336600:CDS | 40.0% | |
| GATGTTAGGTGGTATGTGTT+TGG | - | chr2_4:56025902-56025921 | Msa0336600:CDS | 40.0% | |
| ! | CATAGGCTTTGGTACTATGT+TGG | - | chr2_4:56025983-56026002 | Msa0336600:CDS | 40.0% |
| ! | TATGAAGGGTCTCAAGCTTT+TGG | - | chr2_4:56026022-56026041 | Msa0336600:CDS | 40.0% |
| TTCTCTTGCATAGCAGAACT+TGG | - | chr2_4:56026169-56026188 | Msa0336600:CDS | 40.0% | |
| GATTTAGGAACCATGTTCTC+AGG | - | chr2_4:56026282-56026301 | Msa0336600:intron | 40.0% | |
| CCAATATAGTCCTGAGAACA+TGG | + | chr2_4:56026295-56026314 | None:intergenic | 40.0% | |
| CCATGTTCTCAGGACTATAT+TGG | - | chr2_4:56026292-56026311 | Msa0336600:intron | 40.0% | |
| ! | GGGGAACATCTTTGGTTTAT+TGG | - | chr2_4:56026475-56026494 | Msa0336600:CDS | 40.0% |
| GGGTGATGTAAGGATAACAA+GGG | + | chr2_4:56026518-56026537 | None:intergenic | 40.0% | |
| TGGGTGATGTAAGGATAACA+AGG | + | chr2_4:56026519-56026538 | None:intergenic | 40.0% | |
| !! | CGTAGCAAACAGTTTGTTGT+AGG | + | chr2_4:56026631-56026650 | None:intergenic | 40.0% |
| ! | TCTTGCACTCTAAGAACATC+TGG | + | chr2_4:56026728-56026747 | None:intergenic | 40.0% |
| TGCAAGAAACATTCAAGCCA+TGG | - | chr2_4:56026741-56026760 | Msa0336600:CDS | 40.0% | |
| AGAAACATTCAAGCCATGGA+AGG | - | chr2_4:56026745-56026764 | Msa0336600:CDS | 40.0% | |
| AAGGAAAAACAAGTTTGGGC+AGG | - | chr2_4:56026764-56026783 | Msa0336600:CDS | 40.0% | |
| GAATCTGGAAGTGATCAAAG+TGG | - | chr2_4:56026940-56026959 | Msa0336600:CDS | 40.0% | |
| ! | GTTAGACCTTGATAGCAAAC+AGG | - | chr2_4:56026973-56026992 | Msa0336600:CDS | 40.0% |
| !! | GCATTACCTGTTTGCTATCA+AGG | + | chr2_4:56026982-56027001 | None:intergenic | 40.0% |
| TTTAGTTGCAGACTCCAAGA+AGG | - | chr2_4:56027243-56027262 | Msa0336600:exon | 40.0% | |
| GATTTCATGACTAACAAGGG+AGG | + | chr2_4:56025434-56025453 | None:intergenic | 40.0% | |
| TTGGTTGGATCAGATTCAGT+AGG | + | chr2_4:56025599-56025618 | None:intergenic | 40.0% | |
| GTGGAAAATCATGGCCTAAT+AGG | - | chr2_4:56025651-56025670 | Msa0336600:intron | 40.0% | |
| AACTACACATATAGACCAGG+TGG | - | chr2_4:56025818-56025837 | Msa0336600:CDS | 40.0% | |
| GATGTTAGGTGGTATGTGTT+TGG | - | chr2_4:56025902-56025921 | Msa0336600:CDS | 40.0% | |
| ! | CATAGGCTTTGGTACTATGT+TGG | - | chr2_4:56025983-56026002 | Msa0336600:CDS | 40.0% |
| ! | TATGAAGGGTCTCAAGCTTT+TGG | - | chr2_4:56026022-56026041 | Msa0336600:CDS | 40.0% |
| TTCTCTTGCATAGCAGAACT+TGG | - | chr2_4:56026169-56026188 | Msa0336600:CDS | 40.0% | |
| GATTTAGGAACCATGTTCTC+AGG | - | chr2_4:56026282-56026301 | Msa0336600:intron | 40.0% | |
| CCAATATAGTCCTGAGAACA+TGG | + | chr2_4:56026295-56026314 | None:intergenic | 40.0% | |
| CCATGTTCTCAGGACTATAT+TGG | - | chr2_4:56026292-56026311 | Msa0336600:intron | 40.0% | |
| ! | GGGGAACATCTTTGGTTTAT+TGG | - | chr2_4:56026475-56026494 | Msa0336600:CDS | 40.0% |
| GGGTGATGTAAGGATAACAA+GGG | + | chr2_4:56026518-56026537 | None:intergenic | 40.0% | |
| TGGGTGATGTAAGGATAACA+AGG | + | chr2_4:56026519-56026538 | None:intergenic | 40.0% | |
| !! | CGTAGCAAACAGTTTGTTGT+AGG | + | chr2_4:56026631-56026650 | None:intergenic | 40.0% |
| ! | TCTTGCACTCTAAGAACATC+TGG | + | chr2_4:56026728-56026747 | None:intergenic | 40.0% |
| TGCAAGAAACATTCAAGCCA+TGG | - | chr2_4:56026741-56026760 | Msa0336600:CDS | 40.0% | |
| AGAAACATTCAAGCCATGGA+AGG | - | chr2_4:56026745-56026764 | Msa0336600:CDS | 40.0% | |
| AAGGAAAAACAAGTTTGGGC+AGG | - | chr2_4:56026764-56026783 | Msa0336600:CDS | 40.0% | |
| GAATCTGGAAGTGATCAAAG+TGG | - | chr2_4:56026940-56026959 | Msa0336600:CDS | 40.0% | |
| ! | GTTAGACCTTGATAGCAAAC+AGG | - | chr2_4:56026973-56026992 | Msa0336600:CDS | 40.0% |
| !! | GCATTACCTGTTTGCTATCA+AGG | + | chr2_4:56026982-56027001 | None:intergenic | 40.0% |
| TTTAGTTGCAGACTCCAAGA+AGG | - | chr2_4:56027243-56027262 | Msa0336600:exon | 40.0% | |
| !!! | GGGTCTCAAGCTTTTGGTTT+TGG | - | chr2_4:56026028-56026047 | Msa0336600:CDS | 45.0% |
| !!! | GGTTTTGGAATGGCTTTTGG+TGG | - | chr2_4:56026043-56026062 | Msa0336600:CDS | 45.0% |
| !! | TTTGGAATGGCTTTTGGTGG+AGG | - | chr2_4:56026046-56026065 | Msa0336600:CDS | 45.0% |
| !! | TGCATAGCAGAACTTGGTGT+TGG | - | chr2_4:56026175-56026194 | Msa0336600:CDS | 45.0% |
| ! | ATATGAACCCGGTTTTCACC+AGG | - | chr2_4:56026204-56026223 | Msa0336600:CDS | 45.0% |
| GATTTGAGGGGGAACATCTT+TGG | - | chr2_4:56026467-56026486 | Msa0336600:CDS | 45.0% | |
| ! | GCTACGATAGACGGTTTTCA+CGG | - | chr2_4:56026645-56026664 | Msa0336600:CDS | 45.0% |
| CAAGACATCGTCGAAGAATC+TGG | - | chr2_4:56026925-56026944 | Msa0336600:CDS | 45.0% | |
| ACATCACAACACTGCCTTCT+TGG | + | chr2_4:56027260-56027279 | None:intergenic | 45.0% | |
| AAGGCAGTGTTGTGATGTGT+TGG | - | chr2_4:56027262-56027281 | Msa0336600:five_prime_UTR | 45.0% | |
| !!! | GGGTCTCAAGCTTTTGGTTT+TGG | - | chr2_4:56026028-56026047 | Msa0336600:CDS | 45.0% |
| !!! | GGTTTTGGAATGGCTTTTGG+TGG | - | chr2_4:56026043-56026062 | Msa0336600:CDS | 45.0% |
| !! | TTTGGAATGGCTTTTGGTGG+AGG | - | chr2_4:56026046-56026065 | Msa0336600:CDS | 45.0% |
| !! | TGCATAGCAGAACTTGGTGT+TGG | - | chr2_4:56026175-56026194 | Msa0336600:CDS | 45.0% |
| ! | ATATGAACCCGGTTTTCACC+AGG | - | chr2_4:56026204-56026223 | Msa0336600:CDS | 45.0% |
| GATTTGAGGGGGAACATCTT+TGG | - | chr2_4:56026467-56026486 | Msa0336600:CDS | 45.0% | |
| ! | GCTACGATAGACGGTTTTCA+CGG | - | chr2_4:56026645-56026664 | Msa0336600:CDS | 45.0% |
| CAAGACATCGTCGAAGAATC+TGG | - | chr2_4:56026925-56026944 | Msa0336600:CDS | 45.0% | |
| ACATCACAACACTGCCTTCT+TGG | + | chr2_4:56027260-56027279 | None:intergenic | 45.0% | |
| AAGGCAGTGTTGTGATGTGT+TGG | - | chr2_4:56027262-56027281 | Msa0336600:five_prime_UTR | 45.0% | |
| ATCGCTGATCTCAAACCACC+TGG | + | chr2_4:56025836-56025855 | None:intergenic | 50.0% | |
| ATTAGGACGCGGATTCCCTA+CGG | + | chr2_4:56026368-56026387 | None:intergenic | 50.0% | |
| ! | CGATAGACGGTTTTCACGGA+CGG | - | chr2_4:56026649-56026668 | Msa0336600:CDS | 50.0% |
| ACGGACGGTTTCAGTGTCAT+GGG | - | chr2_4:56026664-56026683 | Msa0336600:CDS | 50.0% | |
| ATCGCTGATCTCAAACCACC+TGG | + | chr2_4:56025836-56025855 | None:intergenic | 50.0% | |
| ATTAGGACGCGGATTCCCTA+CGG | + | chr2_4:56026368-56026387 | None:intergenic | 50.0% | |
| ! | CGATAGACGGTTTTCACGGA+CGG | - | chr2_4:56026649-56026668 | Msa0336600:CDS | 50.0% |
| ACGGACGGTTTCAGTGTCAT+GGG | - | chr2_4:56026664-56026683 | Msa0336600:CDS | 50.0% | |
| ! | TTTGAGATCAGCGATCCGCG+TGG | - | chr2_4:56025841-56025860 | Msa0336600:CDS | 55.0% |
| CTTTCACAACACGTGCCACG+CGG | + | chr2_4:56025859-56025878 | None:intergenic | 55.0% | |
| ! | GGAATGGCTTTTGGTGGAGG+TGG | - | chr2_4:56026049-56026068 | Msa0336600:CDS | 55.0% |
| ATTCCGGATTCCCTGACCGT+AGG | - | chr2_4:56026349-56026368 | Msa0336600:intron | 55.0% | |
| TTCCGGATTCCCTGACCGTA+GGG | - | chr2_4:56026350-56026369 | Msa0336600:intron | 55.0% | |
| TTCCCTACGGTCAGGGAATC+CGG | + | chr2_4:56026355-56026374 | None:intergenic | 55.0% | |
| CACGGACGGTTTCAGTGTCA+TGG | - | chr2_4:56026663-56026682 | Msa0336600:CDS | 55.0% | |
| CGGACGGTTTCAGTGTCATG+GGG | - | chr2_4:56026665-56026684 | Msa0336600:CDS | 55.0% | |
| GCGGTCTGCAACTGCAATTG+CGG | + | chr2_4:56027125-56027144 | None:intergenic | 55.0% | |
| ! | TTTGAGATCAGCGATCCGCG+TGG | - | chr2_4:56025841-56025860 | Msa0336600:CDS | 55.0% |
| CTTTCACAACACGTGCCACG+CGG | + | chr2_4:56025859-56025878 | None:intergenic | 55.0% | |
| ! | GGAATGGCTTTTGGTGGAGG+TGG | - | chr2_4:56026049-56026068 | Msa0336600:CDS | 55.0% |
| ATTCCGGATTCCCTGACCGT+AGG | - | chr2_4:56026349-56026368 | Msa0336600:intron | 55.0% | |
| TTCCGGATTCCCTGACCGTA+GGG | - | chr2_4:56026350-56026369 | Msa0336600:intron | 55.0% | |
| TTCCCTACGGTCAGGGAATC+CGG | + | chr2_4:56026355-56026374 | None:intergenic | 55.0% | |
| CACGGACGGTTTCAGTGTCA+TGG | - | chr2_4:56026663-56026682 | Msa0336600:CDS | 55.0% | |
| CGGACGGTTTCAGTGTCATG+GGG | - | chr2_4:56026665-56026684 | Msa0336600:CDS | 55.0% | |
| GCGGTCTGCAACTGCAATTG+CGG | + | chr2_4:56027125-56027144 | None:intergenic | 55.0% | |
| ACGCGGATTCCCTACGGTCA+GGG | + | chr2_4:56026362-56026381 | None:intergenic | 60.0% | |
| ACGCGGATTCCCTACGGTCA+GGG | + | chr2_4:56026362-56026381 | None:intergenic | 60.0% | |
| GACGCGGATTCCCTACGGTC+AGG | + | chr2_4:56026363-56026382 | None:intergenic | 65.0% | |
| GACGCGGATTCCCTACGGTC+AGG | + | chr2_4:56026363-56026382 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 56025334 | 56027358 | 56025334 | ID=Msa0336600;Name=Msa0336600 |
| chr2_4 | mRNA | 56025334 | 56027358 | 56025334 | ID=Msa0336600-mRNA-1;Parent=Msa0336600;Name=Msa0336600-mRNA-1;_AED=0.06;_eAED=0.06;_QI=112|0.5|0.66|1|1|1|3|0|471 |
| chr2_4 | exon | 56025334 | 56025438 | 56025334 | ID=Msa0336600-mRNA-1:exon:17081;Parent=Msa0336600-mRNA-1 |
| chr2_4 | exon | 56025698 | 56026228 | 56025698 | ID=Msa0336600-mRNA-1:exon:17080;Parent=Msa0336600-mRNA-1 |
| chr2_4 | exon | 56026467 | 56027358 | 56026467 | ID=Msa0336600-mRNA-1:exon:17079;Parent=Msa0336600-mRNA-1 |
| chr2_4 | five_prime_UTR | 56027247 | 56027358 | 56027247 | ID=Msa0336600-mRNA-1:five_prime_utr;Parent=Msa0336600-mRNA-1 |
| chr2_4 | CDS | 56026467 | 56027246 | 56026467 | ID=Msa0336600-mRNA-1:cds;Parent=Msa0336600-mRNA-1 |
| chr2_4 | CDS | 56025698 | 56026228 | 56025698 | ID=Msa0336600-mRNA-1:cds;Parent=Msa0336600-mRNA-1 |
| chr2_4 | CDS | 56025334 | 56025438 | 56025334 | ID=Msa0336600-mRNA-1:cds;Parent=Msa0336600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
