AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1441450


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1441450 MtrunA17_Chr1g0187381 99.074 432 4 0 1 432 394 825 0.0 906
Msa1441450 MtrunA17_Chr1g0166651 83.991 431 69 0 1 431 342 772 0.0 770
Msa1441450 MtrunA17_Chr8g0368741 55.324 432 192 1 1 431 348 779 2.88e-176 512
Msa1441450 MtrunA17_Chr5g0417841 37.327 434 268 2 1 431 320 752 1.09e-106 332
Msa1441450 MtrunA17_Chr2g0302531 37.662 462 250 9 1 431 339 793 4.98e-100 316
Msa1441450 MtrunA17_Chr7g0217801 38.584 438 260 6 1 431 342 777 4.40e-98 310
Msa1441450 MtrunA17_Chr7g0217771 39.255 349 204 5 89 431 1 347 1.22e-85 265
Msa1441450 MtrunA17_Chr7g0217821 36.494 348 215 4 89 431 1 347 1.44e-76 242
Msa1441450 MtrunA17_Chr2g0322931 28.649 370 231 14 64 414 91 446 4.36e-35 135
Msa1441450 MtrunA17_Chr7g0246941 28.424 387 240 14 37 407 37 402 8.12e-35 134
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1441450 AT3G23430.1 73.318 431 115 0 1 431 351 781 0.0 702
Msa1441450 AT1G68740.1 54.988 431 193 1 2 431 353 783 4.64e-172 501
Msa1441450 AT1G68740.2 52.342 363 172 1 2 363 353 715 5.66e-132 397
Msa1441450 AT3G29060.1 38.889 432 258 3 1 427 363 793 1.09e-114 354
Msa1441450 AT1G35350.2 39.773 440 251 5 1 431 132 566 2.13e-109 334
Msa1441450 AT1G26730.1 40.732 437 251 4 1 431 315 749 4.28e-109 338
Msa1441450 AT1G14040.1 37.701 435 266 3 1 431 376 809 1.31e-108 339
Msa1441450 AT1G35350.1 39.773 440 251 5 1 431 316 750 3.02e-107 333
Msa1441450 AT4G25350.1 38.940 434 261 2 3 432 309 742 3.76e-107 333
Msa1441450 AT1G69480.2 37.442 430 261 5 1 425 339 765 7.78e-103 323
Msa1441450 AT1G69480.1 37.442 430 261 5 1 425 339 765 7.78e-103 323
Msa1441450 AT2G03260.2 36.508 441 268 4 1 431 152 590 7.43e-102 315
Msa1441450 AT2G03240.1 36.156 437 271 4 1 431 385 819 5.04e-100 317
Msa1441450 AT2G03260.1 36.508 441 268 4 1 431 365 803 1.63e-99 315
Msa1441450 AT1G26730.2 36.856 369 228 3 1 366 315 681 8.99e-76 250
Msa1441450 AT2G03250.1 32.190 379 243 6 1 367 320 696 5.71e-68 229
Msa1441450 AT2G03250.2 31.716 268 177 3 1 264 320 585 1.12e-43 161
Msa1441450 AT2G32295.1 27.346 373 228 15 84 432 98 451 1.84e-32 128
Msa1441450 AT2G32295.2 27.346 373 228 15 84 432 98 451 1.84e-32 128
Msa1441450 AT5G35730.1 27.515 338 220 12 84 407 102 428 1.34e-31 125

Find 140 sgRNAs with CRISPR-Local

Find 466 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTCAAATTTCTTCAATATT+TGG 0.096794 tig0029316:+21149 None:intergenic
TCAATTCTCATTGCCATTCT+AGG 0.174578 tig0029316:+21600 None:intergenic
TATCCTTTATGCCATATTAT+TGG 0.198668 tig0029316:-16192 Msa1441450:CDS
CACCCTCAAAACAACGTTTA+AGG 0.208521 tig0029316:+15694 None:intergenic
TTGGCTTGCTCAAAACTTAT+AGG 0.228204 tig0029316:-21419 Msa1441450:intron
CTCCTCCTTCGGCGTGGTTA+TGG 0.243700 tig0029316:+24336 None:intergenic
TTGAAGTTTACCTTATAAAA+TGG 0.247316 tig0029316:+16585 None:intergenic
ATCTCTAAGCCATGGATTTC+TGG 0.248145 tig0029316:+15846 None:intergenic
ATGTTATCATGATCAGATTC+AGG 0.249027 tig0029316:+24256 None:intergenic
CGGGATTCTGATTATTCATT+AGG 0.249123 tig0029316:-22126 Msa1441450:intron
GGCGAAGTGCTTTGTGAATA+TGG 0.251631 tig0029316:+18104 None:intergenic
ACTTTCCCATGTTAGCTAAA+TGG 0.256879 tig0029316:+16025 None:intergenic
TGCAACCACTGTTGTCATTA+AGG 0.259161 tig0029316:+16926 None:intergenic
TATCATTTATAATTTGCTTT+AGG 0.270894 tig0029316:+22214 None:intergenic
TAGATGATAACACATGTTAT+TGG 0.282445 tig0029316:+15341 None:intergenic
TCACTCTGGAAGACTGTATA+TGG 0.300089 tig0029316:-16230 Msa1441450:CDS
GATTCCATTGCTAAGGCATT+TGG 0.302519 tig0029316:-16311 Msa1441450:CDS
ATGAGAATCTTTATGTTGTT+GGG 0.307349 tig0029316:+18044 None:intergenic
TCTCTTGTTTAATGTAAAAC+TGG 0.307997 tig0029316:+22292 None:intergenic
CGCCAACAATGACAGGAAAA+AGG 0.314572 tig0029316:-18085 Msa1441450:CDS
TTGCAGGAAGTGCATCAATT+TGG 0.321566 tig0029316:+16856 None:intergenic
CTTTGGCAGCTCACTGAATA+TGG 0.322190 tig0029316:-21181 Msa1441450:intron
TGCATAGCACGCCAATAATA+TGG 0.325310 tig0029316:+16181 None:intergenic
ATTTACACTAGAAATATATT+AGG 0.326255 tig0029316:+15176 None:intergenic
TCTGTATTATTTGCCTTTGT+TGG 0.332893 tig0029316:+22171 None:intergenic
CAGCTATTACTAGCATGCTT+TGG 0.334532 tig0029316:-21545 Msa1441450:five_prime_UTR
TCTTAATTTGCAGAATGTTT+AGG 0.335433 tig0029316:-21741 Msa1441450:intron
AAAGCAAAGAGAATTGAAAA+TGG 0.340353 tig0029316:+24310 None:intergenic
TGATAACATAAATATCATTA+AGG 0.344335 tig0029316:-24242 Msa1441450:intron
GTGGAGCTCTATAGAGGCCT+TGG 0.346019 tig0029316:-21438 Msa1441450:five_prime_UTR
GCTCGAGTTGCATTTGTTCC+CGG 0.355428 tig0029316:+21573 None:intergenic
CAACCACTTATCAACTCTAT+TGG 0.357066 tig0029316:-15906 Msa1441450:CDS
TGCAGAATGTTTAGGAGATT+CGG 0.369539 tig0029316:-21733 Msa1441450:intron
AACCACTTATCAACTCTATT+GGG 0.370941 tig0029316:-15905 Msa1441450:CDS
AGCTATTACTAGCATGCTTT+GGG 0.372445 tig0029316:-21544 Msa1441450:five_prime_UTR
TTATTAGGTTCTTAGACTAA+TGG 0.374210 tig0029316:-18139 Msa1441450:intron
AAACAAGAGAATGAATTCAT+TGG 0.375539 tig0029316:-22279 Msa1441450:five_prime_UTR
CCTTATCAGAACTAACGAAA+TGG 0.375830 tig0029316:+18616 None:intergenic
ACGAATGCCTCCTTCCATTC+TGG 0.378946 tig0029316:+24422 None:intergenic
TATGAGAATCTTTATGTTGT+TGG 0.379645 tig0029316:+18043 None:intergenic
TATGCTTAAGTGATGTCCTT+GGG 0.382707 tig0029316:+16973 None:intergenic
GTGAGGAAGAAAACCATAAA+AGG 0.387305 tig0029316:-22525 Msa1441450:five_prime_UTR
CCATTTCGTTAGTTCTGATA+AGG 0.398330 tig0029316:-18616 Msa1441450:intron
AACTACTAGTTGTAACCTAT+TGG 0.410734 tig0029316:-16287 Msa1441450:CDS
CTTCCAGAGTGACAAGTCTC+AGG 0.411067 tig0029316:+16241 None:intergenic
AGCCTGCACTTATTTATGTA+TGG 0.411360 tig0029316:-17056 Msa1441450:CDS
AACAAGAGAATGAATTCATT+GGG 0.412131 tig0029316:-22278 Msa1441450:five_prime_UTR
GTCTCTGCAGGGTTGTCTAC+AGG 0.421744 tig0029316:-17480 Msa1441450:intron
ACTTCCTGCAATATTACTTC+TGG 0.423000 tig0029316:-16844 Msa1441450:intron
AGCCATGGATTTCTGGAGTT+AGG 0.425098 tig0029316:+15853 None:intergenic
ATAATTGTACAAGCTCTGTT+TGG 0.426330 tig0029316:+22484 None:intergenic
AGGAGGCATTCGTGAACTAT+TGG 0.429457 tig0029316:-24412 Msa1441450:five_prime_UTR
GTATTATTTGCCTTTGTTGG+CGG 0.447529 tig0029316:+22174 None:intergenic
CTCGAGTTGCATTTGTTCCC+GGG 0.455117 tig0029316:+21574 None:intergenic
AGATTCAGGGTGAGAGCTTG+AGG 0.459456 tig0029316:+24270 None:intergenic
CTAACCAGAAGTAATATTGC+AGG 0.460005 tig0029316:+16840 None:intergenic
TCAGAATCTGTCTCTCGAAA+TGG 0.463930 tig0029316:+15381 None:intergenic
CTTATCAGAACTAACGAAAT+GGG 0.470046 tig0029316:+18617 None:intergenic
ACGCCAATAATATGGCATAA+AGG 0.472830 tig0029316:+16189 None:intergenic
TGTTATCATGATCAGATTCA+GGG 0.473244 tig0029316:+24257 None:intergenic
GGATGAAACAGTAGCGGGTC+GGG 0.473616 tig0029316:+16634 None:intergenic
GAAAATGGAACCTCCTCCTT+CGG 0.473857 tig0029316:+24325 None:intergenic
AGAGAAGAAAAGTGGGAATG+AGG 0.483526 tig0029316:+24526 None:intergenic
GGCAATGAGAATTGATGTCC+CGG 0.486915 tig0029316:-21592 Msa1441450:five_prime_UTR
GAGGGCATTGGAATTTCTAC+AGG 0.487620 tig0029316:-15580 Msa1441450:intron
TATATAGAGAGAAGAAAAGT+GGG 0.488654 tig0029316:+24519 None:intergenic
TAACATGGGAAAGTATGTTT+CGG 0.489749 tig0029316:-16016 Msa1441450:CDS
AAGTTATTCGAAGAGGGCAT+TGG 0.491191 tig0029316:-15592 Msa1441450:CDS
GACAACAGTGGTTGCAGCAA+TGG 0.492576 tig0029316:-16919 Msa1441450:CDS
ACAACATAAAGATTCTCATA+TGG 0.498007 tig0029316:-18040 Msa1441450:CDS
ATATATAGAGAGAAGAAAAG+TGG 0.502086 tig0029316:+24518 None:intergenic
CTATGCTTAAGTGATGTCCT+TGG 0.502908 tig0029316:+16972 None:intergenic
TTTCGGCGATGGTAGCAGCC+GGG 0.514299 tig0029316:-15999 Msa1441450:CDS
GATTTAGTGAACAATCCAAC+AGG 0.519226 tig0029316:-21519 Msa1441450:five_prime_UTR
AGCACTTCGCCAACAATGAC+AGG 0.527144 tig0029316:-18092 Msa1441450:CDS
GATTCAGGGTGAGAGCTTGA+GGG 0.527153 tig0029316:+24271 None:intergenic
ATCCATACATAAATAAGTGC+AGG 0.527262 tig0029316:+17054 None:intergenic
AAAGAAAGGAAAGCCTAGAA+TGG 0.527856 tig0029316:-21613 Msa1441450:five_prime_UTR
GGCTGATCAACTAACTAGCC+AGG 0.528042 tig0029316:-16445 Msa1441450:intron
GTTTCGGCGATGGTAGCAGC+CGG 0.528660 tig0029316:-16000 Msa1441450:CDS
TGTGAACCATTTAGCTAACA+TGG 0.530263 tig0029316:-16031 Msa1441450:CDS
AGAAATTTCACATACAGAAG+AGG 0.536149 tig0029316:-21697 Msa1441450:five_prime_UTR
CACCCTGAGACTTGTCACTC+TGG 0.536341 tig0029316:-16244 Msa1441450:CDS
GAGAATGAATTCATTGGGAG+AGG 0.538951 tig0029316:-22273 Msa1441450:five_prime_UTR
TGAGAATCTTTATGTTGTTG+GGG 0.542063 tig0029316:+18045 None:intergenic
TTGTGAATGAAATCTCCTGT+TGG 0.543831 tig0029316:+21504 None:intergenic
GTTTCCAAATGCCTTAGCAA+TGG 0.544525 tig0029316:+16307 None:intergenic
ATCCCAATAGAGTTGATAAG+TGG 0.549202 tig0029316:+15903 None:intergenic
CACTTGAAGTTATTCGAAGA+GGG 0.550159 tig0029316:-15598 Msa1441450:CDS
TATTACTAGCATGCTTTGGG+AGG 0.550285 tig0029316:-21541 Msa1441450:five_prime_UTR
ACGGAACTGTCTTCACTGCT+CGG 0.550399 tig0029316:+15406 None:intergenic
ATCCTGCAGCCCTTAAAAGA+AGG 0.553004 tig0029316:+16889 None:intergenic
GGGAATGAGGTTATATGAAG+TGG 0.556456 tig0029316:+24539 None:intergenic
GATAACACATGTTATTGGAA+TGG 0.557682 tig0029316:+15346 None:intergenic
GAATACAGATTCCATTGCTA+AGG 0.561087 tig0029316:-16318 Msa1441450:intron
CTTTCCCGCGTTCTCCAGCA+CGG 0.563353 tig0029316:-22146 Msa1441450:five_prime_UTR
CATAACCACGCCGAAGGAGG+AGG 0.563418 tig0029316:-24335 Msa1441450:five_prime_UTR
ACTAAGTCATCTCTAAGCCA+TGG 0.564904 tig0029316:+15838 None:intergenic
AAGCTCAACTCATACCAGAA+TGG 0.565158 tig0029316:-24436 Msa1441450:five_prime_UTR
AAGAAAACCATAAAAGGCAG+TGG 0.567667 tig0029316:-22519 Msa1441450:five_prime_UTR
GAATAATCAGAATCCCGTGC+TGG 0.569715 tig0029316:+22132 None:intergenic
ATATAAGCTGACTCATTGCT+AGG 0.573301 tig0029316:+17396 None:intergenic
ACTATCATGCATTTCAAAGT+CGG 0.575527 tig0029316:-15659 Msa1441450:CDS
ATCCTAACTCCAGAAATCCA+TGG 0.587682 tig0029316:-15855 Msa1441450:CDS
GGGAAAGTATGTTTCGGCGA+TGG 0.588314 tig0029316:-16010 Msa1441450:CDS
TCAACTCATACCAGAATGGA+AGG 0.589083 tig0029316:-24432 Msa1441450:five_prime_UTR
GGAAGTGCATCAATTTGGCT+AGG 0.589297 tig0029316:+16861 None:intergenic
GTTACAAGTGTGCGAGACGG+TGG 0.590064 tig0029316:-16068 Msa1441450:intron
CAAAACCATAACCACGCCGA+AGG 0.591766 tig0029316:-24341 Msa1441450:five_prime_UTR
TTTCCCGCGTTCTCCAGCAC+GGG 0.592357 tig0029316:-22145 Msa1441450:five_prime_UTR
AATGAGCATCTAAATAATGT+CGG 0.593691 tig0029316:-15435 Msa1441450:CDS
AACCATAACCACGCCGAAGG+AGG 0.596363 tig0029316:-24338 Msa1441450:five_prime_UTR
AGAAATGGTGAAATTCTCAA+AGG 0.597216 tig0029316:-24465 Msa1441450:five_prime_UTR
GCTGTATGTTACTCTCGCCC+CGG 0.599822 tig0029316:+15981 None:intergenic
TTCGGCGATGGTAGCAGCCG+GGG 0.604999 tig0029316:-15998 Msa1441450:CDS
ATGGATGTAATCTATATATG+TGG 0.607621 tig0029316:-17037 Msa1441450:CDS
AGTCTTAATCACTTCTGTAG+TGG 0.608252 tig0029316:-15929 Msa1441450:CDS
TCTGTCTCTCGAAATGGTAA+CGG 0.611018 tig0029316:+15387 None:intergenic
TTCCAGAGTGACAAGTCTCA+GGG 0.611456 tig0029316:+16242 None:intergenic
TCTTAGACTAATGGACGAAG+TGG 0.615048 tig0029316:-18130 Msa1441450:exon
GAATCCCGTGCTGGAGAACG+CGG 0.615381 tig0029316:+22141 None:intergenic
CGGATGAAACAGTAGCGGGT+CGG 0.620064 tig0029316:+16633 None:intergenic
GACACGGATGAAACAGTAGC+GGG 0.621758 tig0029316:+16629 None:intergenic
GCACTTGAAGTTATTCGAAG+AGG 0.623377 tig0029316:-15599 Msa1441450:CDS
GTGAACCATTTAGCTAACAT+GGG 0.634733 tig0029316:-16030 Msa1441450:CDS
ATGCTTAAGTGATGTCCTTG+GGG 0.641855 tig0029316:+16974 None:intergenic
AATCCCGTGCTGGAGAACGC+GGG 0.646988 tig0029316:+22142 None:intergenic
AGATTATGTTGCGAATGACA+CGG 0.653819 tig0029316:+16613 None:intergenic
GCAATGAGAATTGATGTCCC+GGG 0.657527 tig0029316:-21591 Msa1441450:five_prime_UTR
TTTGTTACAAGTGTGCGAGA+CGG 0.662092 tig0029316:-16071 Msa1441450:intron
GCAGACAAAGTGATCAGCTG+TGG 0.664837 tig0029316:-15960 Msa1441450:CDS
AAATTATAAATGATAGACGA+CGG 0.683872 tig0029316:-22206 Msa1441450:five_prime_UTR
AATATTGAAGAAATTTGACA+AGG 0.684176 tig0029316:-21146 Msa1441450:intron
ATTGTAAAATGTAATCAACA+AGG 0.685399 tig0029316:-15264 Msa1441450:three_prime_UTR
TGGAACCTCCTCCTTCGGCG+TGG 0.689910 tig0029316:+24330 None:intergenic
CACTACCTTAATGACAACAG+TGG 0.704785 tig0029316:-16931 Msa1441450:CDS
ACTCATACCAGAATGGAAGG+AGG 0.716098 tig0029316:-24429 Msa1441450:five_prime_UTR
GCTTGATGATGAGCTAAACA+AGG 0.730559 tig0029316:-22319 Msa1441450:five_prime_UTR
CAGAGTGACAAGTCTCAGGG+TGG 0.731138 tig0029316:+16245 None:intergenic
TGACACGGATGAAACAGTAG+CGG 0.738243 tig0029316:+16628 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATAAATCATTTACTAA+TGG - tig0029316:16284-16303 Msa1441450:CDS 10.0%
!! AATATAAATCATTTACTAAT+GGG - tig0029316:16285-16304 Msa1441450:CDS 10.0%
!!! TATTACATTTTTTTTAAAGT+AGG + tig0029316:16720-16739 None:intergenic 10.0%
!!! AATATGAATATTTTTCTAAT+TGG - tig0029316:17160-17179 Msa1441450:intron 10.0%
!! ATAATTAACCAATTAAATTA+AGG - tig0029316:19680-19699 Msa1441450:intron 10.0%
!! ATATATACTTTAATCTATAT+TGG - tig0029316:19903-19922 Msa1441450:intron 10.0%
!! TATATACTTTAATCTATATT+GGG - tig0029316:19904-19923 Msa1441450:intron 10.0%
!! CATAATATATTTGTATAAAT+GGG + tig0029316:20085-20104 None:intergenic 10.0%
!! ATTATGGAATTATTATATTT+AGG - tig0029316:20099-20118 Msa1441450:intron 10.0%
!!! TTATAGTTTTAATAACTTTT+TGG - tig0029316:21451-21470 Msa1441450:five_prime_UTR 10.0%
!! TGATAACATAAATATCATTA+AGG - tig0029316:15471-15490 Msa1441450:intron 15.0%
!! TATTGAGAAATATTAATTTC+TGG - tig0029316:15521-15540 Msa1441450:intron 15.0%
!!! TTCTATATTTTATCACATAA+TGG - tig0029316:15607-15626 Msa1441450:CDS 15.0%
!! AAAAAAATGATAATAATTGG+TGG + tig0029316:16146-16165 None:intergenic 15.0%
!!! CCTATACTATATTATAATTT+TGG + tig0029316:16324-16343 None:intergenic 15.0%
!! CCAAAATTATAATATAGTAT+AGG - tig0029316:16321-16340 Msa1441450:intron 15.0%
!!! AAAAATTATTTCTTCATTCT+TGG + tig0029316:16443-16462 None:intergenic 15.0%
!! AATTTGATTATATTTCATTG+TGG - tig0029316:16529-16548 Msa1441450:intron 15.0%
!!! ATTTTCGACAATAATTAAAA+TGG + tig0029316:16663-16682 None:intergenic 15.0%
!!! GACATTATTATTCTTTAAAA+TGG + tig0029316:16691-16710 None:intergenic 15.0%
!!! TGATTAATATTTTTATCAAG+TGG - tig0029316:16781-16800 Msa1441450:intron 15.0%
!!! GATTAATATTTTTATCAAGT+GGG - tig0029316:16782-16801 Msa1441450:intron 15.0%
!!! ATTAATATTTTTATCAAGTG+GGG - tig0029316:16783-16802 Msa1441450:intron 15.0%
!! AAAATATGAATATCAGAATA+TGG - tig0029316:17109-17128 Msa1441450:intron 15.0%
!!! TATCATTTATAATTTGCTTT+AGG + tig0029316:17502-17521 None:intergenic 15.0%
!! AATAATATGGAAATCAAAAA+AGG + tig0029316:17936-17955 None:intergenic 15.0%
!! CATATTATTTAAGTATGAAT+GGG - tig0029316:17947-17966 Msa1441450:intron 15.0%
!! AATTATTAATTACCTAGAAA+AGG + tig0029316:18379-18398 None:intergenic 15.0%
!! ATTGTAAATATTGTGAATAT+CGG - tig0029316:18723-18742 Msa1441450:intron 15.0%
!! ATCAATTAGGAAAAAAAAAT+GGG + tig0029316:18789-18808 None:intergenic 15.0%
!! TATCAATTAGGAAAAAAAAA+TGG + tig0029316:18790-18809 None:intergenic 15.0%
!! TTTAGATGTATTTATCAATT+AGG + tig0029316:18802-18821 None:intergenic 15.0%
!! AATAAATAAAAAGTTGGAAT+GGG + tig0029316:19424-19443 None:intergenic 15.0%
!! TAATAAATAAAAAGTTGGAA+TGG + tig0029316:19425-19444 None:intergenic 15.0%
!! TCTCTTAATAAATAAAAAGT+TGG + tig0029316:19430-19449 None:intergenic 15.0%
!! TATAAAATCTAATTAAGCAT+TGG - tig0029316:19809-19828 Msa1441450:intron 15.0%
!! ATATACTTTAATCTATATTG+GGG - tig0029316:19905-19924 Msa1441450:intron 15.0%
!! CCATAATATATTTGTATAAA+TGG + tig0029316:20086-20105 None:intergenic 15.0%
!! CCATTTATACAAATATATTA+TGG - tig0029316:20083-20102 Msa1441450:intron 15.0%
!! TTTAAGCTAAAAATTGTAAA+GGG + tig0029316:20283-20302 None:intergenic 15.0%
!! ATTTAAGCTAAAAATTGTAA+AGG + tig0029316:20284-20303 None:intergenic 15.0%
!!! TTTACAATTTTTAGCTTAAA+TGG - tig0029316:20283-20302 Msa1441450:intron 15.0%
!! TAATGATTGTTAAATCATAA+TGG - tig0029316:20344-20363 Msa1441450:intron 15.0%
!! TATGTTTACTTGAATAATTT+GGG + tig0029316:20496-20515 None:intergenic 15.0%
!! TTATGTTTACTTGAATAATT+TGG + tig0029316:20497-20516 None:intergenic 15.0%
!! TAAATAATAATCAGGTATAA+GGG + tig0029316:20852-20871 None:intergenic 15.0%
!! TTAAATAATAATCAGGTATA+AGG + tig0029316:20853-20872 None:intergenic 15.0%
!! TCACAAATTAAATAATAATC+AGG + tig0029316:20860-20879 None:intergenic 15.0%
!!! TATGATTTAGTTCATATTAT+TGG + tig0029316:21008-21027 None:intergenic 15.0%
!!! TTTTAATAACTTTTTGGTTT+TGG - tig0029316:21457-21476 Msa1441450:five_prime_UTR 15.0%
!!! ACTTGTTAATTGATATTATT+AGG - tig0029316:21559-21578 Msa1441450:five_prime_UTR 15.0%
!! ACATATAATCTACAATATAT+AGG - tig0029316:21866-21885 Msa1441450:intron 15.0%
!! TTAAGAAATAAATATGATGA+AGG - tig0029316:21973-21992 Msa1441450:intron 15.0%
!!! ATTTGAAATATTTGTTTTGT+TGG - tig0029316:22135-22154 Msa1441450:five_prime_UTR 15.0%
!!! TTTCAGCAATTAATTTTTTT+AGG + tig0029316:22563-22582 None:intergenic 15.0%
!!! TTTATCTTTTAAACCATTTT+TGG - tig0029316:22977-22996 Msa1441450:intron 15.0%
!! AAAATTTCATGTTAATAACT+AGG + tig0029316:23361-23380 None:intergenic 15.0%
!!! TAACATGAAATTTTATGTTA+CGG - tig0029316:23367-23386 Msa1441450:intron 15.0%
!!! TCACTATTTAACAAATTTTA+AGG + tig0029316:24206-24225 None:intergenic 15.0%
!! AATATATTAGGAAAAAAATG+TGG + tig0029316:24528-24547 None:intergenic 15.0%
!!! GTATGATAATGCTATATATA+TGG + tig0029316:15709-15728 None:intergenic 20.0%
!! ATTCAAATTTCATTAGTTAG+AGG + tig0029316:15749-15768 None:intergenic 20.0%
!! AACTAATGAAATTTGAATCA+TGG - tig0029316:15751-15770 Msa1441450:intron 20.0%
!! ACAATATAATTACGTATGTA+TGG + tig0029316:15986-16005 None:intergenic 20.0%
!!! TCATTAATTTTAATTAGCCA+AGG - tig0029316:16096-16115 Msa1441450:intron 20.0%
!! AATGAATTGAAAATAATCCT+TGG + tig0029316:16116-16135 None:intergenic 20.0%
!! TGATATTATGTTAATACGAT+TGG + tig0029316:16406-16425 None:intergenic 20.0%
!! AATTATATCTTCATTCTTAG+AGG + tig0029316:16513-16532 None:intergenic 20.0%
!! CAAAAAAAGTAAGGAAAAAA+AGG + tig0029316:16855-16874 None:intergenic 20.0%
!!! TTTTTTCCTTACTTTTTTTG+TGG - tig0029316:16855-16874 Msa1441450:CDS 20.0%
!!! TTTTTCCTTACTTTTTTTGT+GGG - tig0029316:16856-16875 Msa1441450:CDS 20.0%
!!! AATATTTTTCTAATTGGTGT+AGG - tig0029316:17166-17185 Msa1441450:intron 20.0%
!! AAATTATAAATGATAGACGA+CGG - tig0029316:17507-17526 Msa1441450:intron 20.0%
!! ATAATATGATAAGTGCTAAA+AGG - tig0029316:17830-17849 Msa1441450:intron 20.0%
!! CCATTCATACTTAAATAATA+TGG + tig0029316:17949-17968 None:intergenic 20.0%
!! CCATATTATTTAAGTATGAA+TGG - tig0029316:17946-17965 Msa1441450:intron 20.0%
!! TGTCAAATTTCTTCAATATT+TGG + tig0029316:18567-18586 None:intergenic 20.0%
!! AATATTGAAGAAATTTGACA+AGG - tig0029316:18567-18586 Msa1441450:intron 20.0%
!!! TAAAGAAGATGTGATATTTT+AGG + tig0029316:18598-18617 None:intergenic 20.0%
!! ATGCTGTTAAAAAGATATAT+CGG - tig0029316:18751-18770 Msa1441450:intron 20.0%
!!! AAAAGATATATCGGTTAAAA+TGG - tig0029316:18760-18779 Msa1441450:intron 20.0%
!!! AAAGATATATCGGTTAAAAT+GGG - tig0029316:18761-18780 Msa1441450:intron 20.0%
!! TTAGAGTAAAGACAAATAAA+AGG - tig0029316:19501-19520 Msa1441450:intron 20.0%
!! TTTATGACATAACCAAATTA+GGG + tig0029316:20260-20279 None:intergenic 20.0%
!!! TGTTATCTTTTTTAATCACA+AGG - tig0029316:20441-20460 Msa1441450:intron 20.0%
!!! GTTATCTTTTTTAATCACAA+GGG - tig0029316:20442-20461 Msa1441450:intron 20.0%
!! AAAATATTGAAGGGAATATT+CGG + tig0029316:21128-21147 None:intergenic 20.0%
!! AAAAGTGAAGACAAATAATA+TGG - tig0029316:21171-21190 Msa1441450:five_prime_UTR 20.0%
!!! TTCATTTAACGACAAATTTT+CGG + tig0029316:21337-21356 None:intergenic 20.0%
!! ATACTCAATTAAATTTACCA+TGG - tig0029316:21365-21384 Msa1441450:intron 20.0%
!! TTCTTTAATAATGTGCATAA+TGG - tig0029316:21490-21509 Msa1441450:five_prime_UTR 20.0%
!! TCTTTAATAATGTGCATAAT+GGG - tig0029316:21491-21510 Msa1441450:five_prime_UTR 20.0%
!!! ACTTTTGTGATGTAATATTT+TGG + tig0029316:22594-22613 None:intergenic 20.0%
!! TGAATAAATAAGCTAGATTT+AGG - tig0029316:22915-22934 Msa1441450:intron 20.0%
!! GGTTTAAAAGATAAATACTA+GGG + tig0029316:22972-22991 None:intergenic 20.0%
!! TGGTTTAAAAGATAAATACT+AGG + tig0029316:22973-22992 None:intergenic 20.0%
!! TTGAAGTTTACCTTATAAAA+TGG + tig0029316:23131-23150 None:intergenic 20.0%
!!! TTTTAATTTGTCTTTTCAAC+AGG - tig0029316:23223-23242 Msa1441450:intron 20.0%
!!! CACATAAGTTGATTTTTTTT+GGG - tig0029316:23305-23324 Msa1441450:intron 20.0%
!!! ACATAAGTTGATTTTTTTTG+GGG - tig0029316:23306-23325 Msa1441450:intron 20.0%
!! TAGGATGAATAATAAAGTAT+AGG + tig0029316:23342-23361 None:intergenic 20.0%
!!! TTTTAATATCAGAGTGATAT+TGG - tig0029316:23988-24007 Msa1441450:intron 20.0%
!! ATTGTAAAATGTAATCAACA+AGG - tig0029316:24449-24468 Msa1441450:five_prime_UTR 20.0%
! TATATAGAGAGAAGAAAAGT+GGG + tig0029316:15197-15216 None:intergenic 25.0%
! ATATATAGAGAGAAGAAAAG+TGG + tig0029316:15198-15217 None:intergenic 25.0%
!! TTTCTTTTTCTATATGGTGA+AGG + tig0029316:15233-15252 None:intergenic 25.0%
! TCACCATATAGAAAAAGAAA+TGG - tig0029316:15233-15252 Msa1441450:three_prime_UTR 25.0%
!! TCACCATTTCTTTTTCTATA+TGG + tig0029316:15239-15258 None:intergenic 25.0%
! AAAGCAAAGAGAATTGAAAA+TGG + tig0029316:15406-15425 None:intergenic 25.0%
! ATTTCATTAGTTAGAGGATA+AGG + tig0029316:15743-15762 None:intergenic 25.0%
! AATGAAATTTGAATCATGGT+TGG - tig0029316:15755-15774 Msa1441450:intron 25.0%
!! CTACTATTTGTGTTTCTATA+TGG + tig0029316:15781-15800 None:intergenic 25.0%
!! GTAGAATCATAACTTTAGAA+TGG - tig0029316:15797-15816 Msa1441450:intron 25.0%
! AATATCATTTCACATCACTA+GGG + tig0029316:15846-15865 None:intergenic 25.0%
! TAATATCATTTCACATCACT+AGG + tig0029316:15847-15866 None:intergenic 25.0%
! TGATGAACAAAATCTGTATT+AGG + tig0029316:16369-16388 None:intergenic 25.0%
! CACAATAATACAAGTCAATA+AGG - tig0029316:16559-16578 Msa1441450:intron 25.0%
!!! GGAAAAAAAGGCTTTAAAAA+GGG + tig0029316:16843-16862 None:intergenic 25.0%
!!! AGGAAAAAAAGGCTTTAAAA+AGG + tig0029316:16844-16863 None:intergenic 25.0%
! AAAAACCCACAAAAAAAGTA+AGG + tig0029316:16864-16883 None:intergenic 25.0%
!! AGAGCTTGTACAATTATTTT+CGG - tig0029316:17235-17254 Msa1441450:intron 25.0%
!! GCTTAAATACTATGCATTTT+TGG - tig0029316:17296-17315 Msa1441450:intron 25.0%
!! TCTCTTGTTTAATGTAAAAC+TGG + tig0029316:17424-17443 None:intergenic 25.0%
! AAACAAGAGAATGAATTCAT+TGG - tig0029316:17434-17453 Msa1441450:CDS 25.0%
! AACAAGAGAATGAATTCATT+GGG - tig0029316:17435-17454 Msa1441450:CDS 25.0%
! GAATTTACTATTGTCTACAA+AGG + tig0029316:17639-17658 None:intergenic 25.0%
!!! TCTTAATTTGCAGAATGTTT+AGG - tig0029316:17972-17991 Msa1441450:intron 25.0%
!! GAATTTCTAAAAATAGCATG+TGG - tig0029316:18428-18447 Msa1441450:intron 25.0%
!! TATCACATCTTCTTTACTTT+TGG - tig0029316:18602-18621 Msa1441450:intron 25.0%
! TTTCATTCATTTGAATGCAT+AGG - tig0029316:18682-18701 Msa1441450:intron 25.0%
! TTCATTCATTTGAATGCATA+GGG - tig0029316:18683-18702 Msa1441450:intron 25.0%
! TACAATATCAAGTACCAATT+TGG + tig0029316:18709-18728 None:intergenic 25.0%
! CATCTAAATATGTAAAGTCT+TGG - tig0029316:18814-18833 Msa1441450:intron 25.0%
! ATTTATAAAGAGACAATGTC+TGG + tig0029316:18946-18965 None:intergenic 25.0%
! ATTTATAAAGAGACAATGTC+TGG + tig0029316:18946-18965 None:intergenic 25.0%
!!! AAATGATGAACTATTTTGAC+CGG - tig0029316:19373-19392 Msa1441450:intron 25.0%
! TTCATGAATAGTGTGATAAA+TGG + tig0029316:19548-19567 None:intergenic 25.0%
!! AGGTATAGTTTTCTCAATTA+TGG + tig0029316:19617-19636 None:intergenic 25.0%
! GTTACGTTCCTTAATTTAAT+TGG + tig0029316:19691-19710 None:intergenic 25.0%
! ATGACTTTATCACTCAAAAT+GGG + tig0029316:19745-19764 None:intergenic 25.0%
! TATGACTTTATCACTCAAAA+TGG + tig0029316:19746-19765 None:intergenic 25.0%
! ATCTAAGCTTTCTATGAATA+TGG + tig0029316:20022-20041 None:intergenic 25.0%
! GGAATTATTATATTTAGGCA+TGG - tig0029316:20104-20123 Msa1441450:intron 25.0%
! AGACACACAAAAATTGAAAT+GGG + tig0029316:20160-20179 None:intergenic 25.0%
! AAGACACACAAAAATTGAAA+TGG + tig0029316:20161-20180 None:intergenic 25.0%
! TTACATAATTAGCCCTAATT+TGG - tig0029316:20245-20264 Msa1441450:intron 25.0%
! GTTTATGACATAACCAAATT+AGG + tig0029316:20261-20280 None:intergenic 25.0%
! TAATAAAACTAACCCTAGTT+TGG - tig0029316:20774-20793 Msa1441450:intron 25.0%
! ACTATAATTGTTCATTTGCT+TGG - tig0029316:20903-20922 Msa1441450:intron 25.0%
!! AATAACTTGAAGAAGCTTTT+TGG + tig0029316:21058-21077 None:intergenic 25.0%
!! AATATTTTCAAAGCTGCATT+TGG - tig0029316:21140-21159 Msa1441450:intron 25.0%
!! ATATTTTCAAAGCTGCATTT+GGG - tig0029316:21141-21160 Msa1441450:intron 25.0%
!! TTTTATATAATCGCAACATC+CGG - tig0029316:21217-21236 Msa1441450:intron 25.0%
!!! TTAAATCAGGTTTTAAACCA+TGG + tig0029316:21385-21404 None:intergenic 25.0%
!! TGATTTAATCAAGTGTCATT+CGG - tig0029316:21397-21416 Msa1441450:intron 25.0%
! GATAATCTAATATGTTGCTA+TGG - tig0029316:21525-21544 Msa1441450:five_prime_UTR 25.0%
! TTATTAGGTTCTTAGACTAA+TGG - tig0029316:21574-21593 Msa1441450:five_prime_UTR 25.0%
! ATGAGAATCTTTATGTTGTT+GGG + tig0029316:21672-21691 None:intergenic 25.0%
! TATGAGAATCTTTATGTTGT+TGG + tig0029316:21673-21692 None:intergenic 25.0%
! ACAACATAAAGATTCTCATA+TGG - tig0029316:21673-21692 Msa1441450:five_prime_UTR 25.0%
!! ATAATTTTGTACCTGAAAAC+AGG + tig0029316:22356-22375 None:intergenic 25.0%
! TATTAAGTGTGTCTATTTCA+TGG + tig0029316:22516-22535 None:intergenic 25.0%
! ATGGATGTAATCTATATATG+TGG - tig0029316:22676-22695 Msa1441450:intron 25.0%
! AACTTCAATTATCTTCTAAC+AGG - tig0029316:23149-23168 Msa1441450:intron 25.0%
!!! GCACATAAGTTGATTTTTTT+TGG - tig0029316:23304-23323 Msa1441450:intron 25.0%
!!! TTTTGAAAACTTTAGCCAAT+AGG + tig0029316:23444-23463 None:intergenic 25.0%
! TATCCTTTATGCCATATTAT+TGG - tig0029316:23521-23540 Msa1441450:intron 25.0%
!!! AACTTTGTTATTTTCTGAAC+AGG - tig0029316:24249-24268 Msa1441450:five_prime_UTR 25.0%
! AATGAGCATCTAAATAATGT+CGG - tig0029316:24278-24297 Msa1441450:five_prime_UTR 25.0%
! TAGATGATAACACATGTTAT+TGG + tig0029316:24375-24394 None:intergenic 25.0%
! TTTTTCTATATGGTGAAGGA+AGG + tig0029316:15229-15248 None:intergenic 30.0%
AGAAATGGTGAAATTCTCAA+AGG - tig0029316:15248-15267 Msa1441450:three_prime_UTR 30.0%
TGTTATCATGATCAGATTCA+GGG + tig0029316:15459-15478 None:intergenic 30.0%
ATGTTATCATGATCAGATTC+AGG + tig0029316:15460-15479 None:intergenic 30.0%
TAATGCTATATATATGGACG+TGG + tig0029316:15703-15722 None:intergenic 30.0%
GCATTATCATACACTAAATG+TGG - tig0029316:15717-15736 Msa1441450:intron 30.0%
!! TCATAACTTTAGAATGGTTG+AGG - tig0029316:15803-15822 Msa1441450:intron 30.0%
ACGCACATCAATTATTATCA+TGG - tig0029316:16168-16187 Msa1441450:intron 30.0%
ATTTACTAATGGGATTGCTA+TGG - tig0029316:16295-16314 Msa1441450:CDS 30.0%
! TACGATTGGTTGTATGTATA+AGG + tig0029316:16392-16411 None:intergenic 30.0%
! TCAATAAGGTGTCATCTTAA+TGG - tig0029316:16573-16592 Msa1441450:intron 30.0%
! ATTTTTATCAAGTGGGGTTA+AGG - tig0029316:16789-16808 Msa1441450:intron 30.0%
TTAAGGCCTCTAATTAAAGT+GGG - tig0029316:16806-16825 Msa1441450:intron 30.0%
ACTAAACCCACTTTAATTAG+AGG + tig0029316:16815-16834 None:intergenic 30.0%
! TCTAATTAAAGTGGGTTTAG+TGG - tig0029316:16814-16833 Msa1441450:intron 30.0%
!! AAAAAAGGCTTTAAAAAGGG+AGG + tig0029316:16840-16859 None:intergenic 30.0%
ATAATTGTACAAGCTCTGTT+TGG + tig0029316:17232-17251 None:intergenic 30.0%
! TGTACAATTATTTTCGGAAG+AGG - tig0029316:17241-17260 Msa1441450:intron 30.0%
! ATATCCTTTTTACTGTTCAC+AGG - tig0029316:17352-17371 Msa1441450:intron 30.0%
TCTGTATTATTTGCCTTTGT+TGG + tig0029316:17545-17564 None:intergenic 30.0%
AGAAATTTCACATACAGAAG+AGG - tig0029316:18016-18035 Msa1441450:intron 30.0%
ATAGCAAGCTTAGAGAAAAA+TGG - tig0029316:18041-18060 Msa1441450:CDS 30.0%
! ATTTTGTGAATTCAGCAATG+AGG - tig0029316:18069-18088 Msa1441450:CDS 30.0%
ATGAGGACAAAAACAAAGAA+AGG - tig0029316:18086-18105 Msa1441450:CDS 30.0%
!!! AATGATTAGAAGTGCTTTTG+TGG - tig0029316:18256-18275 Msa1441450:intron 30.0%
! TTCACTAATCTTCCTTTTCT+AGG - tig0029316:18364-18383 Msa1441450:intron 30.0%
TCGTTTATAGTTTAGGAATG+AGG + tig0029316:18473-18492 None:intergenic 30.0%
GAAACAGTCGTTTATAGTTT+AGG + tig0029316:18480-18499 None:intergenic 30.0%
CTAATTACATTCTCTCACTT+TGG - tig0029316:18515-18534 Msa1441450:intron 30.0%
TGAAGAAATTTGACAAGGTA+AGG - tig0029316:18572-18591 Msa1441450:intron 30.0%
TGACTTTATCACTCAAAATG+GGG + tig0029316:19744-19763 None:intergenic 30.0%
!! GTTGACTTGATTGGAAATAT+TGG + tig0029316:20377-20396 None:intergenic 30.0%
!! TTGACTAATGTTGACTTGAT+TGG + tig0029316:20386-20405 None:intergenic 30.0%
AATCAAGTGATTTGACTCAA+TGG + tig0029316:20422-20441 None:intergenic 30.0%
! CTTTTGCTTATATTAGTGAC+CGG + tig0029316:20695-20714 None:intergenic 30.0%
! CTTTTGCTTATATTAGTGAC+CGG - tig0029316:20695-20714 Msa1441450:intron 30.0%
CTTATCAGAACTAACGAAAT+GGG + tig0029316:21099-21118 None:intergenic 30.0%
!! GCAGCTTTGAAAATATTGAA+GGG + tig0029316:21137-21156 None:intergenic 30.0%
!! TGCAGCTTTGAAAATATTGA+AGG + tig0029316:21138-21157 None:intergenic 30.0%
! TATTTTCAAAGCTGCATTTG+GGG - tig0029316:21142-21161 Msa1441450:intron 30.0%
!! TATTTTTGCACGTGATTAAC+CGG + tig0029316:21239-21258 None:intergenic 30.0%
GTTAATCACGTGCAAAAATA+TGG - tig0029316:21239-21258 Msa1441450:intron 30.0%
!!! CGAACTAACCATATTTTTTG+CGG - tig0029316:21298-21317 Msa1441450:intron 30.0%
TTAATCTGCCGCAAAAAATA+TGG + tig0029316:21309-21328 None:intergenic 30.0%
GAATGACACTTGATTAAATC+AGG + tig0029316:21398-21417 None:intergenic 30.0%
! GATTTAATCAAGTGTCATTC+GGG - tig0029316:21398-21417 Msa1441450:intron 30.0%
ATTCGGGTGTAAAAAAAATG+TGG - tig0029316:21414-21433 Msa1441450:intron 30.0%
TTCGGGTGTAAAAAAAATGT+GGG - tig0029316:21415-21434 Msa1441450:intron 30.0%
TGAGAATCTTTATGTTGTTG+GGG + tig0029316:21671-21690 None:intergenic 30.0%
!! ATCAAAAGTGCCCTTAATTA+AGG + tig0029316:21741-21760 None:intergenic 30.0%
AACTTGCAATGCAATATATG+AGG - tig0029316:21825-21844 Msa1441450:intron 30.0%
! AATTAGTATGGTTTGGAGTT+TGG - tig0029316:22094-22113 Msa1441450:intron 30.0%
! GTTTTGTGTATACGCAATAT+TGG - tig0029316:22271-22290 Msa1441450:five_prime_UTR 30.0%
! AAAATGTCTATCCTGTTTTC+AGG - tig0029316:22342-22361 Msa1441450:five_prime_UTR 30.0%
!! TTACATCACAAAAGTGCTAA+TGG - tig0029316:22599-22618 Msa1441450:intron 30.0%
ATCCATACATAAATAAGTGC+AGG + tig0029316:22662-22681 None:intergenic 30.0%
! AATCTGCTCACCATTTTATA+AGG - tig0029316:23118-23137 Msa1441450:intron 30.0%
TCAATTATCTTCTAACAGGT+TGG - tig0029316:23153-23172 Msa1441450:intron 30.0%
!!! TCTGCTAGTAGACTTTTTTA+TGG - tig0029316:23247-23266 Msa1441450:intron 30.0%
AACTACTAGTTGTAACCTAT+TGG - tig0029316:23426-23445 Msa1441450:intron 30.0%
! ACATTTTCTGAATCTTGTAG+AGG + tig0029316:23564-23583 None:intergenic 30.0%
! TAACATGGGAAAGTATGTTT+CGG - tig0029316:23697-23716 Msa1441450:intron 30.0%
AACCACTTATCAACTCTATT+GGG - tig0029316:23808-23827 Msa1441450:intron 30.0%
! ACTCTATTGGGATTTTATCA+AGG - tig0029316:23820-23839 Msa1441450:intron 30.0%
! ATTGGGATTTTATCAAGGAT+TGG - tig0029316:23825-23844 Msa1441450:intron 30.0%
! TTGGGATTTTATCAAGGATT+GGG - tig0029316:23826-23845 Msa1441450:intron 30.0%
GTAAGTTCTCTATCTCTTAA+TGG - tig0029316:23932-23951 Msa1441450:intron 30.0%
ACTATCATGCATTTCAAAGT+CGG - tig0029316:24054-24073 Msa1441450:intron 30.0%
! CCAATCTCTAAGAATCTAAA+AGG + tig0029316:24182-24201 None:intergenic 30.0%
! CCTTTTAGATTCTTAGAGAT+TGG - tig0029316:24179-24198 Msa1441450:intron 30.0%
!!! TTGTTATTTTCTGAACAGGT+TGG - tig0029316:24253-24272 Msa1441450:five_prime_UTR 30.0%
GATAACACATGTTATTGGAA+TGG + tig0029316:24370-24389 None:intergenic 30.0%
TGTCCAAAATGTTATGCACA+CGG - tig0029316:15546-15565 Msa1441450:intron 35.0%
AAGATACGCACTAACAAAGA+AGG + tig0029316:15660-15679 None:intergenic 35.0%
AGACAAGATCACTATGATTG+TGG - tig0029316:15925-15944 Msa1441450:CDS 35.0%
TATGATTGTGGAGTGATTCA+AGG - tig0029316:15937-15956 Msa1441450:CDS 35.0%
ATCTTCATTCTTAGAGGACA+TGG + tig0029316:16507-16526 None:intergenic 35.0%
GTTAAGGCCTCTAATTAAAG+TGG - tig0029316:16805-16824 Msa1441450:intron 35.0%
! TTTTCTAATTGGTGTAGGTG+AGG - tig0029316:17171-17190 Msa1441450:intron 35.0%
GTGAGGAAGAAAACCATAAA+AGG - tig0029316:17188-17207 Msa1441450:intron 35.0%
AAGAAAACCATAAAAGGCAG+TGG - tig0029316:17194-17213 Msa1441450:intron 35.0%
! ATTATTTTCGGAAGAGGATG+AGG - tig0029316:17247-17266 Msa1441450:intron 35.0%
GAAAAAATATCCGCCAACAA+AGG - tig0029316:17529-17548 Msa1441450:intron 35.0%
GTATTATTTGCCTTTGTTGG+CGG + tig0029316:17542-17561 None:intergenic 35.0%
CGGGATTCTGATTATTCATT+AGG - tig0029316:17587-17606 Msa1441450:intron 35.0%
TGCAGAATGTTTAGGAGATT+CGG - tig0029316:17980-17999 Msa1441450:intron 35.0%
AAAGAAAGGAAAGCCTAGAA+TGG - tig0029316:18100-18119 Msa1441450:CDS 35.0%
TCAATTCTCATTGCCATTCT+AGG + tig0029316:18116-18135 None:intergenic 35.0%
AGCTATTACTAGCATGCTTT+GGG - tig0029316:18169-18188 Msa1441450:intron 35.0%
GATTTAGTGAACAATCCAAC+AGG - tig0029316:18194-18213 Msa1441450:intron 35.0%
TTGTGAATGAAATCTCCTGT+TGG + tig0029316:18212-18231 None:intergenic 35.0%
!!! TATAAGTTTTGAGCAAGCCA+AGG + tig0029316:18295-18314 None:intergenic 35.0%
!! TTGGCTTGCTCAAAACTTAT+AGG - tig0029316:18294-18313 Msa1441450:intron 35.0%
CTATAAGTACATGTCTGCAT+AGG - tig0029316:18629-18648 Msa1441450:five_prime_UTR 35.0%
CATAGGCAAACACACATAAA+GGG - tig0029316:18646-18665 Msa1441450:five_prime_UTR 35.0%
ATAGCTCACCTAAATTGACA+CGG - tig0029316:19186-19205 Msa1441450:intron 35.0%
AAAAGTTGGAATGGGCAAAT+TGG + tig0029316:19416-19435 None:intergenic 35.0%
AAACTACTCTACTCGTATGA+TGG - tig0029316:19567-19586 Msa1441450:intron 35.0%
! GGCGACTTAATTTGGAAATT+AGG + tig0029316:19637-19656 None:intergenic 35.0%
CAAGTATAGGCGACTTAATT+TGG + tig0029316:19645-19664 None:intergenic 35.0%
TAAATGGGATAAAAGCTTCC+TGG + tig0029316:20070-20089 None:intergenic 35.0%
TAATTTGGGCTTTCTTCTCT+GGG + tig0029316:20482-20501 None:intergenic 35.0%
ATAATTTGGGCTTTCTTCTC+TGG + tig0029316:20483-20502 None:intergenic 35.0%
ACGAGATATTGTCCAAACTA+GGG + tig0029316:20789-20808 None:intergenic 35.0%
AACGAGATATTGTCCAAACT+AGG + tig0029316:20790-20809 None:intergenic 35.0%
ATTGTTCATTTGCTTGGCAT+TGG - tig0029316:20909-20928 Msa1441450:intron 35.0%
CCTTATCAGAACTAACGAAA+TGG + tig0029316:21100-21119 None:intergenic 35.0%
!! CCATTTCGTTAGTTCTGATA+AGG - tig0029316:21097-21116 Msa1441450:intron 35.0%
ATCACGTGCAAAAATATGGT+TGG - tig0029316:21243-21262 Msa1441450:intron 35.0%
!!! CATATGGTCACTTTTCTTGT+CGG - tig0029316:21689-21708 Msa1441450:five_prime_UTR 35.0%
TCTCTGTCTCACCTTAATTA+AGG - tig0029316:21727-21746 Msa1441450:five_prime_UTR 35.0%
CTCTGTCTCACCTTAATTAA+GGG - tig0029316:21728-21747 Msa1441450:five_prime_UTR 35.0%
! TAGCGCAGCAAAATTTTACT+TGG + tig0029316:21892-21911 None:intergenic 35.0%
GTATTTGTCTTAGTGCTTCA+TGG + tig0029316:21923-21942 None:intergenic 35.0%
CAAGTAACCGCTAATTAGTA+TGG - tig0029316:22082-22101 Msa1441450:intron 35.0%
AACCGCTAATTAGTATGGTT+TGG - tig0029316:22087-22106 Msa1441450:intron 35.0%
CTCCAAACCATACTAATTAG+CGG + tig0029316:22092-22111 None:intergenic 35.0%
! ATATAAGCTGACTCATTGCT+AGG + tig0029316:22320-22339 None:intergenic 35.0%
AGCCTGCACTTATTTATGTA+TGG - tig0029316:22657-22676 Msa1441450:intron 35.0%
!! TCATTTTTGAATTCTCCCCA+AGG - tig0029316:22724-22743 Msa1441450:intron 35.0%
TATGCTTAAGTGATGTCCTT+GGG + tig0029316:22743-22762 None:intergenic 35.0%
! TGGTTATGCACCTTCTTTTA+AGG - tig0029316:22814-22833 Msa1441450:intron 35.0%
! GGTTATGCACCTTCTTTTAA+GGG - tig0029316:22815-22834 Msa1441450:intron 35.0%
ACTTCCTGCAATATTACTTC+TGG - tig0029316:22869-22888 Msa1441450:intron 35.0%
CTAACCAGAAGTAATATTGC+AGG + tig0029316:22876-22895 None:intergenic 35.0%
AGCACAAATGTGTCCAAAAA+TGG + tig0029316:22993-23012 None:intergenic 35.0%
AGATTATGTTGCGAATGACA+CGG + tig0029316:23103-23122 None:intergenic 35.0%
TGTGCACAAATATAATCACC+TGG + tig0029316:23289-23308 None:intergenic 35.0%
GAATACAGATTCCATTGCTA+AGG - tig0029316:23395-23414 Msa1441450:intron 35.0%
ACGCCAATAATATGGCATAA+AGG + tig0029316:23527-23546 None:intergenic 35.0%
TGTGAACCATTTAGCTAACA+TGG - tig0029316:23682-23701 Msa1441450:intron 35.0%
GTGAACCATTTAGCTAACAT+GGG - tig0029316:23683-23702 Msa1441450:intron 35.0%
ACTTTCCCATGTTAGCTAAA+TGG + tig0029316:23691-23710 None:intergenic 35.0%
AGTCTTAATCACTTCTGTAG+TGG - tig0029316:23784-23803 Msa1441450:intron 35.0%
CAACCACTTATCAACTCTAT+TGG - tig0029316:23807-23826 Msa1441450:intron 35.0%
!! ATCCCAATAGAGTTGATAAG+TGG + tig0029316:23813-23832 None:intergenic 35.0%
! TGGGATTTTATCAAGGATTG+GGG - tig0029316:23827-23846 Msa1441450:intron 35.0%
CACTTGAAGTTATTCGAAGA+GGG - tig0029316:24115-24134 Msa1441450:intron 35.0%
AGAGAAGAAAAGTGGGAATG+AGG + tig0029316:15190-15209 None:intergenic 40.0%
AAGCTCAACTCATACCAGAA+TGG - tig0029316:15277-15296 Msa1441450:three_prime_UTR 40.0%
TCAACTCATACCAGAATGGA+AGG - tig0029316:15281-15300 Msa1441450:three_prime_UTR 40.0%
! TCACCGTGTGCATAACATTT+TGG + tig0029316:15552-15571 None:intergenic 40.0%
ATGGACGTGGAAGAAATCTT+TGG + tig0029316:15690-15709 None:intergenic 40.0%
! GATTCAAGGAGGTATGTATG+CGG - tig0029316:15951-15970 Msa1441450:CDS 40.0%
CTCTCTATTAGCACGTGAAA+TGG - tig0029316:16936-16955 Msa1441450:CDS 40.0%
! TTCTTCTCCACTGCCTTTTA+TGG + tig0029316:17204-17223 None:intergenic 40.0%
CAAGCATCCCAAAAAACACA+CGG + tig0029316:17379-17398 None:intergenic 40.0%
!! GCTTGATGATGAGCTAAACA+AGG - tig0029316:17394-17413 Msa1441450:CDS 40.0%
GAGAATGAATTCATTGGGAG+AGG - tig0029316:17440-17459 Msa1441450:CDS 40.0%
CAGCTATTACTAGCATGCTT+TGG - tig0029316:18168-18187 Msa1441450:intron 40.0%
! TATTACTAGCATGCTTTGGG+AGG - tig0029316:18172-18191 Msa1441450:intron 40.0%
GCATAGGCAAACACACATAA+AGG - tig0029316:18645-18664 Msa1441450:five_prime_UTR 40.0%
TTGAATGCATAGGGCCAAAT+TGG - tig0029316:18692-18711 Msa1441450:intron 40.0%
GATTCTCTCCGTGTCAATTT+AGG + tig0029316:19197-19216 None:intergenic 40.0%
TCATATTGCACAGCCCAATT+GGG + tig0029316:19280-19299 None:intergenic 40.0%
!!! TGATGAACTATTTTGACCGG+TGG - tig0029316:19376-19395 Msa1441450:intron 40.0%
GGTCTATGAATTGTAACCAC+CGG + tig0029316:19395-19414 None:intergenic 40.0%
GTATTGCGTCTCTCAAGTAT+AGG + tig0029316:19658-19677 None:intergenic 40.0%
CTCAAAATGGGGAATGAGAA+GGG + tig0029316:19733-19752 None:intergenic 40.0%
ACTCAAAATGGGGAATGAGA+AGG + tig0029316:19734-19753 None:intergenic 40.0%
CAAGTGATTTGACTCAATGG+TGG + tig0029316:20419-20438 None:intergenic 40.0%
AATTTGGGCTTTCTTCTCTG+GGG + tig0029316:20481-20500 None:intergenic 40.0%
TGACTATCATATACACCCTC+CGG - tig0029316:20566-20585 Msa1441450:intron 40.0%
TGCTTATATTAGTGACCGGA+GGG + tig0029316:20699-20718 None:intergenic 40.0%
TTGCTTATATTAGTGACCGG+AGG + tig0029316:20698-20717 None:intergenic 40.0%
TTGCTTATATTAGTGACCGG+AGG - tig0029316:20698-20717 Msa1441450:intron 40.0%
! AGAACATCAATACTAGCCTC+CGG + tig0029316:20717-20736 None:intergenic 40.0%
GGACAATATCTCGTTACGAA+TGG - tig0029316:20795-20814 Msa1441450:intron 40.0%
ATATTGCCATGTGATCAAGC+AGG - tig0029316:21025-21044 Msa1441450:intron 40.0%
! TCTTAGACTAATGGACGAAG+TGG - tig0029316:21583-21602 Msa1441450:five_prime_UTR 40.0%
! TGCCTTTTTCCTGTCATTGT+TGG + tig0029316:21633-21652 None:intergenic 40.0%
! TGCATTGCAAGTTGAACTGA+GGG + tig0029316:21818-21837 None:intergenic 40.0%
! TTGCATTGCAAGTTGAACTG+AGG + tig0029316:21819-21838 None:intergenic 40.0%
ATGCTTAAGTGATGTCCTTG+GGG + tig0029316:22742-22761 None:intergenic 40.0%
CTATGCTTAAGTGATGTCCT+TGG + tig0029316:22744-22763 None:intergenic 40.0%
CACTACCTTAATGACAACAG+TGG - tig0029316:22782-22801 Msa1441450:intron 40.0%
TGCAACCACTGTTGTCATTA+AGG + tig0029316:22790-22809 None:intergenic 40.0%
! TTGCAGGAAGTGCATCAATT+TGG + tig0029316:22860-22879 None:intergenic 40.0%
! GATTCCATTGCTAAGGCATT+TGG - tig0029316:23402-23421 Msa1441450:intron 40.0%
GTTTCCAAATGCCTTAGCAA+TGG + tig0029316:23409-23428 None:intergenic 40.0%
! TCACTCTGGAAGACTGTATA+TGG - tig0029316:23483-23502 Msa1441450:intron 40.0%
TGCATAGCACGCCAATAATA+TGG + tig0029316:23535-23554 None:intergenic 40.0%
TTTGTTACAAGTGTGCGAGA+CGG - tig0029316:23642-23661 Msa1441450:intron 40.0%
ATCCTAACTCCAGAAATCCA+TGG - tig0029316:23858-23877 Msa1441450:intron 40.0%
ATCTCTAAGCCATGGATTTC+TGG + tig0029316:23870-23889 None:intergenic 40.0%
ACTAAGTCATCTCTAAGCCA+TGG + tig0029316:23878-23897 None:intergenic 40.0%
TCAGAGTGATATTGGATTGC+AGG - tig0029316:23996-24015 Msa1441450:intron 40.0%
!! AGGCCTTAAACGTTGTTTTG+AGG - tig0029316:24016-24035 Msa1441450:intron 40.0%
!!! GGCCTTAAACGTTGTTTTGA+GGG - tig0029316:24017-24036 Msa1441450:intron 40.0%
CACCCTCAAAACAACGTTTA+AGG + tig0029316:24022-24041 None:intergenic 40.0%
! GCGACTGCTAGAATTTTTGT+TGG - tig0029316:24089-24108 Msa1441450:intron 40.0%
GCACTTGAAGTTATTCGAAG+AGG - tig0029316:24114-24133 Msa1441450:intron 40.0%
! AAGTTATTCGAAGAGGGCAT+TGG - tig0029316:24121-24140 Msa1441450:intron 40.0%
TCTGTCTCTCGAAATGGTAA+CGG + tig0029316:24329-24348 None:intergenic 40.0%
TCAGAATCTGTCTCTCGAAA+TGG + tig0029316:24335-24354 None:intergenic 40.0%
ACTCATACCAGAATGGAAGG+AGG - tig0029316:15284-15303 Msa1441450:three_prime_UTR 45.0%
!! AGGAGGCATTCGTGAACTAT+TGG - tig0029316:15301-15320 Msa1441450:three_prime_UTR 45.0%
!! GCGTGGTTATGGTTTTGCTT+TGG + tig0029316:15369-15388 None:intergenic 45.0%
GAAAATGGAACCTCCTCCTT+CGG + tig0029316:15391-15410 None:intergenic 45.0%
TTATGCACACGGTGAAAGCA+TGG - tig0029316:15557-15576 Msa1441450:intron 45.0%
GATTGTGGAGTGATTCAAGG+AGG - tig0029316:15940-15959 Msa1441450:CDS 45.0%
! TTTTCGGAAGAGGATGAGGT+AGG - tig0029316:17251-17270 Msa1441450:intron 45.0%
TTTCGGAAGAGGATGAGGTA+GGG - tig0029316:17252-17271 Msa1441450:intron 45.0%
CGGACCTGTGAACAGTAAAA+AGG + tig0029316:17359-17378 None:intergenic 45.0%
!!! TCACAGGTCCGTGTGTTTTT+TGG - tig0029316:17368-17387 Msa1441450:intron 45.0%
!!! CACAGGTCCGTGTGTTTTTT+GGG - tig0029316:17369-17388 Msa1441450:intron 45.0%
GAATAATCAGAATCCCGTGC+TGG + tig0029316:17584-17603 None:intergenic 45.0%
GGCAATGAGAATTGATGTCC+CGG - tig0029316:18121-18140 Msa1441450:CDS 45.0%
GCAATGAGAATTGATGTCCC+GGG - tig0029316:18122-18141 Msa1441450:CDS 45.0%
! GCTTTTGTGGAGCTCTATAG+AGG - tig0029316:18269-18288 Msa1441450:intron 45.0%
CTTTGGCAGCTCACTGAATA+TGG - tig0029316:18532-18551 Msa1441450:intron 45.0%
CTGTAACCAGACATTGATGC+AGG - tig0029316:19123-19142 Msa1441450:intron 45.0%
GTTGATCCTGCATCAATGTC+TGG + tig0029316:19132-19151 None:intergenic 45.0%
GTCATATTGCACAGCCCAAT+TGG + tig0029316:19281-19300 None:intergenic 45.0%
CTTACTAACTAATGCGTGCC+AGG - tig0029316:20049-20068 Msa1441450:intron 45.0%
AAGACACCTGCTTGATCACA+TGG + tig0029316:21034-21053 None:intergenic 45.0%
! GGCGAAGTGCTTTGTGAATA+TGG + tig0029316:21612-21631 None:intergenic 45.0%
CGCCAACAATGACAGGAAAA+AGG - tig0029316:21628-21647 Msa1441450:five_prime_UTR 45.0%
!! AAGTTGAACTGAGGGTGTTG+TGG + tig0029316:21810-21829 None:intergenic 45.0%
GTTAGTGTCGTGTCGAACAT+CGG - tig0029316:22013-22032 Msa1441450:intron 45.0%
TGGAGTTTGGACTGACTAAG+CGG - tig0029316:22107-22126 Msa1441450:intron 45.0%
TCCTTTGTTACTGTCTCTGC+AGG - tig0029316:22221-22240 Msa1441450:five_prime_UTR 45.0%
CCTTTGTTACTGTCTCTGCA+GGG - tig0029316:22222-22241 Msa1441450:five_prime_UTR 45.0%
ATCCTGCAGCCCTTAAAAGA+AGG + tig0029316:22827-22846 None:intergenic 45.0%
! GGAAGTGCATCAATTTGGCT+AGG + tig0029316:22855-22874 None:intergenic 45.0%
GGGCGATAAAAAAGGTCGAA+TGG + tig0029316:23062-23081 None:intergenic 45.0%
TGACACGGATGAAACAGTAG+CGG + tig0029316:23088-23107 None:intergenic 45.0%
TTCCAGAGTGACAAGTCTCA+GGG + tig0029316:23474-23493 None:intergenic 45.0%
!! AGCCATGGATTTCTGGAGTT+AGG + tig0029316:23863-23882 None:intergenic 45.0%
!!! ACGTTGTTTTGAGGGTGACA+TGG - tig0029316:24025-24044 Msa1441450:intron 45.0%
!!! CGTTGTTTTGAGGGTGACAT+GGG - tig0029316:24026-24045 Msa1441450:intron 45.0%
!! GAGGGCATTGGAATTTCTAC+AGG - tig0029316:24133-24152 Msa1441450:intron 45.0%
!! TAAAAAAAAATGATAATAAT+TGG + tig0029316:16149-16168 None:intergenic 5.0%
!! AGTAAAAAATAAAATAAATA+TGG - tig0029316:17076-17095 Msa1441450:intron 5.0%
!!! TAAAATATATTGAATAATTT+TGG + tig0029316:17785-17804 None:intergenic 5.0%
!!! AGTTAATTTTAAATAAATAA+TGG - tig0029316:19843-19862 Msa1441450:intron 5.0%
!!! GTTAATTTTAAATAAATAAT+GGG - tig0029316:19844-19863 Msa1441450:intron 5.0%
!!! TTAATTTTAAATAAATAATG+GGG - tig0029316:19845-19864 Msa1441450:intron 5.0%
!!! TTTATTTCTTAAATTAATAT+CGG + tig0029316:21965-21984 None:intergenic 5.0%
ACGAATGCCTCCTTCCATTC+TGG + tig0029316:15294-15313 None:intergenic 50.0%
CAAAACCATAACCACGCCGA+AGG - tig0029316:15372-15391 Msa1441450:exon 50.0%
GATTCAGGGTGAGAGCTTGA+GGG + tig0029316:15445-15464 None:intergenic 50.0%
AGATTCAGGGTGAGAGCTTG+AGG + tig0029316:15446-15465 None:intergenic 50.0%
! CTCGAGTTGCATTTGTTCCC+GGG + tig0029316:18142-18161 None:intergenic 50.0%
! GCTCGAGTTGCATTTGTTCC+CGG + tig0029316:18143-18162 None:intergenic 50.0%
GAATCGAACCTGAGACCTTG+CGG - tig0029316:19212-19231 Msa1441450:intron 50.0%
!! GTGGTATTGGCTTGGGTCTT+GGG + tig0029316:19249-19268 None:intergenic 50.0%
ATTGCACAGCCCAATTGGGT+TGG + tig0029316:19276-19295 None:intergenic 50.0%
! GCATGGTGCTTGTGCTTTTC+TGG - tig0029316:20121-20140 Msa1441450:intron 50.0%
!! GCTTTCTTCTCTGGGGCTAA+GGG + tig0029316:20474-20493 None:intergenic 50.0%
AGCACTTCGCCAACAATGAC+AGG - tig0029316:21621-21640 Msa1441450:five_prime_UTR 50.0%
CACGACACTAACACACACGT+AGG + tig0029316:22005-22024 None:intergenic 50.0%
GGAGTTTGGACTGACTAAGC+GGG - tig0029316:22108-22127 Msa1441450:intron 50.0%
CCCTGCAGAGACAGTAACAA+AGG + tig0029316:22225-22244 None:intergenic 50.0%
GACAACAGTGGTTGCAGCAA+TGG - tig0029316:22794-22813 Msa1441450:intron 50.0%
!! CACCTTCTTTTAAGGGCTGC+AGG - tig0029316:22822-22841 Msa1441450:intron 50.0%
GACACGGATGAAACAGTAGC+GGG + tig0029316:23087-23106 None:intergenic 50.0%
GGCTGATCAACTAACTAGCC+AGG - tig0029316:23268-23287 Msa1441450:intron 50.0%
CTTCCAGAGTGACAAGTCTC+AGG + tig0029316:23475-23494 None:intergenic 50.0%
! GGGAAAGTATGTTTCGGCGA+TGG - tig0029316:23703-23722 Msa1441450:intron 50.0%
GCAGACAAAGTGATCAGCTG+TGG - tig0029316:23753-23772 Msa1441450:intron 50.0%
ACGGAACTGTCTTCACTGCT+CGG + tig0029316:24310-24329 None:intergenic 50.0%
AACCATAACCACGCCGAAGG+AGG - tig0029316:15375-15394 Msa1441450:CDS 55.0%
! CACACGGTGAAAGCATGGTG+CGG - tig0029316:15562-15581 Msa1441450:intron 55.0%
GTGGAGCTCTATAGAGGCCT+TGG - tig0029316:18275-18294 Msa1441450:intron 55.0%
!! GGTGGTATTGGCTTGGGTCT+TGG + tig0029316:19250-19269 None:intergenic 55.0%
AGACCCAAGCCAATACCACC+AGG - tig0029316:19250-19269 Msa1441450:intron 55.0%
!! TGGCCTGGTGGTATTGGCTT+GGG + tig0029316:19256-19275 None:intergenic 55.0%
!! TTGGCCTGGTGGTATTGGCT+TGG + tig0029316:19257-19276 None:intergenic 55.0%
!! TTGGGTTGGCCTGGTGGTAT+TGG + tig0029316:19262-19281 None:intergenic 55.0%
TACCACCAGGCCAACCCAAT+TGG - tig0029316:19263-19282 Msa1441450:intron 55.0%
ACCACCAGGCCAACCCAATT+GGG - tig0029316:19264-19283 Msa1441450:intron 55.0%
!! GGCTTTCTTCTCTGGGGCTA+AGG + tig0029316:20475-20494 None:intergenic 55.0%
GTCTCTGCAGGGTTGTCTAC+AGG - tig0029316:22233-22252 Msa1441450:five_prime_UTR 55.0%
AGCGGGTCGGGCGATAAAAA+AGG + tig0029316:23070-23089 None:intergenic 55.0%
!! GGATGAAACAGTAGCGGGTC+GGG + tig0029316:23082-23101 None:intergenic 55.0%
!! CGGATGAAACAGTAGCGGGT+CGG + tig0029316:23083-23102 None:intergenic 55.0%
CAGAGTGACAAGTCTCAGGG+TGG + tig0029316:23471-23490 None:intergenic 55.0%
CACCCTGAGACTTGTCACTC+TGG - tig0029316:23469-23488 Msa1441450:intron 55.0%
GTTACAAGTGTGCGAGACGG+TGG - tig0029316:23645-23664 Msa1441450:intron 55.0%
GCTGTATGTTACTCTCGCCC+CGG + tig0029316:23735-23754 None:intergenic 55.0%
CTCCTCCTTCGGCGTGGTTA+TGG + tig0029316:15380-15399 None:intergenic 60.0%
CATAACCACGCCGAAGGAGG+AGG - tig0029316:15378-15397 Msa1441450:CDS 60.0%
CTTTCCCGCGTTCTCCAGCA+CGG - tig0029316:17567-17586 Msa1441450:intron 60.0%
TTTCCCGCGTTCTCCAGCAC+GGG - tig0029316:17568-17587 Msa1441450:intron 60.0%
AATCCCGTGCTGGAGAACGC+GGG + tig0029316:17574-17593 None:intergenic 60.0%
GAATCCCGTGCTGGAGAACG+CGG + tig0029316:17575-17594 None:intergenic 60.0%
TCGAACCTGAGACCTTGCGG+AGG - tig0029316:19215-19234 Msa1441450:intron 60.0%
!! ACAGCCCAATTGGGTTGGCC+TGG + tig0029316:19271-19290 None:intergenic 60.0%
GTTTCGGCGATGGTAGCAGC+CGG - tig0029316:23713-23732 Msa1441450:intron 60.0%
TTTCGGCGATGGTAGCAGCC+GGG - tig0029316:23714-23733 Msa1441450:intron 60.0%
TGGAACCTCCTCCTTCGGCG+TGG + tig0029316:15386-15405 None:intergenic 65.0%
GTGCTCCTCCGCAAGGTCTC+AGG + tig0029316:19223-19242 None:intergenic 65.0%
! TGGGAGTGTGCTCCTCCGCA+AGG + tig0029316:19230-19249 None:intergenic 65.0%
!! GCCCAATTGGGTTGGCCTGG+TGG + tig0029316:19268-19287 None:intergenic 65.0%
TTCGGCGATGGTAGCAGCCG+GGG - tig0029316:23715-23734 Msa1441450:intron 65.0%
Chromosome Type Strat End Strand Name
tig0029316 gene 15177 24558 15177 ID=Msa1441450;Name=Msa1441450
tig0029316 mRNA 15177 24558 15177 ID=Msa1441450-mRNA-1;Parent=Msa1441450;Name=Msa1441450-mRNA-1;_AED=0.14;_eAED=0.14;_QI=1095|1|1|1|0.78|0.86|15|197|432
tig0029316 exon 15177 15464 15177 ID=Msa1441450-mRNA-1:exon:12802;Parent=Msa1441450-mRNA-1
tig0029316 exon 15581 15717 15581 ID=Msa1441450-mRNA-1:exon:12801;Parent=Msa1441450-mRNA-1
tig0029316 exon 15804 16082 15804 ID=Msa1441450-mRNA-1:exon:12800;Parent=Msa1441450-mRNA-1
tig0029316 exon 16180 16332 16180 ID=Msa1441450-mRNA-1:exon:12799;Parent=Msa1441450-mRNA-1
tig0029316 exon 16446 16490 16446 ID=Msa1441450-mRNA-1:exon:12798;Parent=Msa1441450-mRNA-1
tig0029316 exon 16596 16700 16596 ID=Msa1441450-mRNA-1:exon:12797;Parent=Msa1441450-mRNA-1
tig0029316 exon 16845 17094 16845 ID=Msa1441450-mRNA-1:exon:12796;Parent=Msa1441450-mRNA-1
tig0029316 exon 17372 17492 17372 ID=Msa1441450-mRNA-1:exon:12795;Parent=Msa1441450-mRNA-1
tig0029316 exon 18025 18154 18025 ID=Msa1441450-mRNA-1:exon:12794;Parent=Msa1441450-mRNA-1
tig0029316 exon 18617 18688 18617 ID=Msa1441450-mRNA-1:exon:12793;Parent=Msa1441450-mRNA-1
tig0029316 exon 21147 21194 21147 ID=Msa1441450-mRNA-1:exon:12792;Parent=Msa1441450-mRNA-1
tig0029316 exon 21420 21750 21420 ID=Msa1441450-mRNA-1:exon:12791;Parent=Msa1441450-mRNA-1
tig0029316 exon 22127 22361 22127 ID=Msa1441450-mRNA-1:exon:12790;Parent=Msa1441450-mRNA-1
tig0029316 exon 22467 22547 22467 ID=Msa1441450-mRNA-1:exon:12789;Parent=Msa1441450-mRNA-1
tig0029316 exon 24243 24558 24243 ID=Msa1441450-mRNA-1:exon:12788;Parent=Msa1441450-mRNA-1
tig0029316 five_prime_UTR 24243 24558 24243 ID=Msa1441450-mRNA-1:five_prime_utr;Parent=Msa1441450-mRNA-1
tig0029316 five_prime_UTR 22467 22547 22467 ID=Msa1441450-mRNA-1:five_prime_utr;Parent=Msa1441450-mRNA-1
tig0029316 five_prime_UTR 22127 22361 22127 ID=Msa1441450-mRNA-1:five_prime_utr;Parent=Msa1441450-mRNA-1
tig0029316 five_prime_UTR 21420 21750 21420 ID=Msa1441450-mRNA-1:five_prime_utr;Parent=Msa1441450-mRNA-1
tig0029316 five_prime_UTR 21147 21194 21147 ID=Msa1441450-mRNA-1:five_prime_utr;Parent=Msa1441450-mRNA-1
tig0029316 five_prime_UTR 18617 18688 18617 ID=Msa1441450-mRNA-1:five_prime_utr;Parent=Msa1441450-mRNA-1
tig0029316 five_prime_UTR 18143 18154 18143 ID=Msa1441450-mRNA-1:five_prime_utr;Parent=Msa1441450-mRNA-1
tig0029316 CDS 18025 18142 18025 ID=Msa1441450-mRNA-1:cds;Parent=Msa1441450-mRNA-1
tig0029316 CDS 17372 17492 17372 ID=Msa1441450-mRNA-1:cds;Parent=Msa1441450-mRNA-1
tig0029316 CDS 16845 17094 16845 ID=Msa1441450-mRNA-1:cds;Parent=Msa1441450-mRNA-1
tig0029316 CDS 16596 16700 16596 ID=Msa1441450-mRNA-1:cds;Parent=Msa1441450-mRNA-1
tig0029316 CDS 16446 16490 16446 ID=Msa1441450-mRNA-1:cds;Parent=Msa1441450-mRNA-1
tig0029316 CDS 16180 16332 16180 ID=Msa1441450-mRNA-1:cds;Parent=Msa1441450-mRNA-1
tig0029316 CDS 15804 16082 15804 ID=Msa1441450-mRNA-1:cds;Parent=Msa1441450-mRNA-1
tig0029316 CDS 15581 15717 15581 ID=Msa1441450-mRNA-1:cds;Parent=Msa1441450-mRNA-1
tig0029316 CDS 15374 15464 15374 ID=Msa1441450-mRNA-1:cds;Parent=Msa1441450-mRNA-1
tig0029316 three_prime_UTR 15177 15373 15177 ID=Msa1441450-mRNA-1:three_prime_utr;Parent=Msa1441450-mRNA-1
Gene Sequence

>Msa1441450

ATGGACGAAGTGGAATCCATATTCACAAAGCACTTCGCCAACAATGACAGGAAAAAGGCAATGAAGTTTTTAAGACCCCAACAACATAAAGATTCTCATATGGTCACTTTTCTTGTCGGGTTGTCTACAGGTTGTTTTGTGTCATTGTTTTGTGTATACGCAATATTGGCTCATTTGTGTGCTATATTCTCTCCTAGCAATGAGTCAGCTTATATGCAAAATGTCTATCCTGTTTTCAGTGTGTTTGCATTGCTAAGCCTGCACTTATTTATGTATGGATGTAATCTATATATGTGGAAGAGAACAAGAATCAATTACAACTTCATTTTTGAATTCTCCCCAAGGACATCACTTAAGCATAGAGATGCATTTTTGATATGCACTACCTTAATGACAACAGTGGTTGCAGCAATGGTTATGCACCTTCTTTTAAGGGCTGCAGGATTTTCTCCTAGCCAAATTGATGCACTTCCTGCAATATTACTTCTGTCTTTTATAGCTCTGCTCATTTGTCCATTCGACCTTTTTTATCGCCCGACCCGCTACTGTTTCATCCGTGTCATTCGCAACATAATCTGCTCACCATTTTATAAGGTTCTGCTAGTAGACTTTTTTATGGCTGATCAACTAACTAGCCAGATTCCATTGCTAAGGCATTTGGAAACTACTAGTTGTAACCTATTGGCTAAAGTTTTCAAAACTCACCACCCTGAGACTTGTCACTCTGGAAGACTGTATATGGAAATAACTTATATCATATCCTTTATGCCATATTATTGGCGTGCTATGCAATGTGCGAGACGGTGGTTTGATGACAGTGATGTGAACCATTTAGCTAACATGGGAAAGTATGTTTCGGCGATGGTAGCAGCCGGGGCGAGAGTAACATACAGCAGACAAAGTGATCAGCTGTGGTTCGCAATAGTCTTAATCACTTCTGTAGTGGCAACCACTTATCAACTCTATTGGGATTTTATCAAGGATTGGGGTTTTTTAAATCCTAACTCCAGAAATCCATGGCTTAGAGATGACTTAGTTCTTAAGAAAAAAAGCATATACTATTTGTCTATTGCCTTAAACGTTGTTTTGAGGGTGACATGGGTTGAGACTATCATGCATTTCAAAGTCGGACATGTTCAATCGCGACTGCTAGAATTTTTGTTGGCTGCACTTGAAGTTATTCGAAGAGGGCATTGGAATTTCTACAGGTTGGAAAATGAGCATCTAAATAATGTCGGTCATTACCGAGCAGTGAAGACAGTTCCGTTACCATTTCGAGAGACAGATTCTGACTATTAA

Protein sequence

>Msa1441450

MDEVESIFTKHFANNDRKKAMKFLRPQQHKDSHMVTFLVGLSTGCFVSLFCVYAILAHLCAIFSPSNESAYMQNVYPVFSVFALLSLHLFMYGCNLYMWKRTRINYNFIFEFSPRTSLKHRDAFLICTTLMTTVVAAMVMHLLLRAAGFSPSQIDALPAILLLSFIALLICPFDLFYRPTRYCFIRVIRNIICSPFYKVLLVDFFMADQLTSQIPLLRHLETTSCNLLAKVFKTHHPETCHSGRLYMEITYIISFMPYYWRAMQCARRWFDDSDVNHLANMGKYVSAMVAAGARVTYSRQSDQLWFAIVLITSVVATTYQLYWDFIKDWGFLNPNSRNPWLRDDLVLKKKSIYYLSIALNVVLRVTWVETIMHFKVGHVQSRLLEFLLAALEVIRRGHWNFYRLENEHLNNVGHYRAVKTVPLPFRETDSDY*