AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1377230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1377230 MtrunA17_Chr2g0322991 92.600 473 20 1 1 458 1 473 0.0 874
Msa1377230 MtrunA17_Chr4g0023991 60.752 479 151 7 6 458 9 476 0.0 550
Msa1377230 MtrunA17_Chr4g0024001 53.494 415 168 7 57 457 74 477 3.87e-155 448
Msa1377230 MtrunA17_Chr3g0112211 42.482 419 210 7 56 455 81 487 2.33e-116 350
Msa1377230 MtrunA17_Chr8g0348511 39.069 494 255 9 1 455 1 487 5.66e-113 341
Msa1377230 MtrunA17_Chr8g0387371 41.784 426 218 11 50 454 98 514 8.22e-110 334
Msa1377230 MtrunA17_Chr7g0239421 40.455 440 221 9 36 449 77 501 1.84e-109 333
Msa1377230 MtrunA17_Chr2g0327551 41.882 425 218 10 50 454 38 453 6.08e-109 330
Msa1377230 MtrunA17_Chr4g0030331 45.404 359 183 7 52 406 102 451 7.65e-106 323
Msa1377230 MtrunA17_Chr5g0395861 34.989 463 240 11 33 449 84 531 2.68e-87 276
Msa1377230 MtrunA17_Chr7g0248241 43.494 269 123 6 10 260 33 290 6.06e-66 214
Msa1377230 MtrunA17_Chr5g0397301 49.763 211 98 3 52 261 77 280 6.67e-66 213
Msa1377230 MtrunA17_Chr5g0397311 33.476 233 133 5 240 454 3 231 4.79e-35 130
Msa1377230 MtrunA17_Chr7g0248231 39.355 155 89 3 262 412 4 157 4.26e-31 118
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1377230 AT1G05280.1 50.644 466 189 9 31 458 28 490 1.32e-159 461
Msa1377230 AT4G15240.1 52.745 419 172 6 57 458 78 487 1.37e-147 430
Msa1377230 AT1G05280.2 52.696 408 170 7 31 418 28 432 5.39e-147 427
Msa1377230 AT1G01570.1 40.842 475 229 10 25 454 5 472 1.03e-115 348
Msa1377230 AT1G01570.2 40.842 475 229 10 25 454 36 503 3.48e-115 348
Msa1377230 AT5G41460.1 42.518 421 211 8 57 455 110 521 3.18e-112 341
Msa1377230 AT4G11350.1 40.181 443 229 10 38 454 71 503 8.45e-110 334
Msa1377230 AT4G23490.1 41.190 420 219 8 57 454 109 522 2.23e-109 333
Msa1377230 AT2G37730.1 40.865 416 217 7 54 447 93 501 6.34e-109 332
Msa1377230 AT4G00295.1 43.276 409 203 9 8 393 14 416 7.98e-106 322
Msa1377230 AT3G11420.1 38.009 442 243 9 38 455 71 505 3.90e-101 311
Msa1377230 AT1G07850.1 41.388 418 217 7 57 454 123 532 3.59e-98 305
Msa1377230 AT5G12460.1 37.736 424 234 5 50 455 29 440 1.07e-95 295
Msa1377230 AT1G33250.1 37.530 421 220 9 58 449 130 536 5.08e-94 295
Msa1377230 AT4G11350.2 46.983 232 106 6 38 261 71 293 8.49e-64 209

Find 79 sgRNAs with CRISPR-Local

Find 301 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAGATATTCTCATCTTTA+TGG 0.124890 tig0019874:+109948 Msa1377230:CDS
GGGGAACATCTTTGGTTTAT+TGG 0.179164 tig0019874:+110293 Msa1377230:CDS
ATAGAATCAAAAGATTTATT+TGG 0.183582 tig0019874:-111458 None:intergenic
TTAGAACTTTGATACATTAA+AGG 0.218865 tig0019874:+111412 Msa1377230:three_prime_UTR
ACATCACAACACTGCCTTCT+TGG 0.232333 tig0019874:-111075 None:intergenic
AGTGAAATTAATTTGGTTAC+AGG 0.243417 tig0019874:-109288 None:intergenic
TCGTTTGAACAATTATAAAA+AGG 0.251342 tig0019874:-110720 None:intergenic
AGATGAGAGTGAAATTAATT+TGG 0.266326 tig0019874:-109295 None:intergenic
AAGGATAACAAGGGACTTAA+TGG 0.285506 tig0019874:-110324 None:intergenic
AAGATTGCATCAGTAATATC+TGG 0.291943 tig0019874:-110354 None:intergenic
CGTAGCAAACAGTTTGTTGT+AGG 0.303763 tig0019874:-110446 None:intergenic
TATGAAGGGTCTCAAGCTTT+TGG 0.308499 tig0019874:+109840 Msa1377230:CDS
CTGGTAAAAGCACATTGTTT+TGG 0.309800 tig0019874:-110524 None:intergenic
GAACAGAATCATCACTATTA+AGG 0.324638 tig0019874:-109578 None:intergenic
ATGTTAAATCTCTTTCAATA+TGG 0.325783 tig0019874:+111191 Msa1377230:three_prime_UTR
GTACTATGTTGGAGCTTATT+CGG 0.326012 tig0019874:+109812 Msa1377230:CDS
AGCAGTGCTCTTCAAGAATC+TGG 0.337520 tig0019874:-111218 None:intergenic
GTGGAAAATCATGGCCTAAT+AGG 0.338730 tig0019874:+109469 Msa1377230:CDS
CTTACTACACCTCATATCAT+AGG 0.340340 tig0019874:+111322 Msa1377230:three_prime_UTR
CAAGACATCGTCGAAGAATC+TGG 0.341468 tig0019874:+110743 Msa1377230:CDS
AATTGAATCATTCAGATGTT+AGG 0.344242 tig0019874:+109706 Msa1377230:CDS
CTAAATATGATCATAGGCTT+TGG 0.364697 tig0019874:+109790 Msa1377230:CDS
ATTTATTACCTGGTGAAAAC+CGG 0.376989 tig0019874:-110030 None:intergenic
CACGGACGGTTTCAGTGTCA+TGG 0.380415 tig0019874:+110481 Msa1377230:CDS
AATTAATTTGGTTACAGGTT+TGG 0.387469 tig0019874:-109283 None:intergenic
GCTAATGATTCCATCTTTAC+CGG 0.391353 tig0019874:-110685 None:intergenic
GATGTTAGGTGGTATGTGTT+TGG 0.412774 tig0019874:+109720 Msa1377230:CDS
TCTTGCACTCTAAGAACATC+TGG 0.423499 tig0019874:-110543 None:intergenic
TTGGATTATAGGTTGATTTG+AGG 0.424875 tig0019874:+110271 Msa1377230:intron
TGCATAGCAGAACTTGGTGT+TGG 0.429174 tig0019874:+109993 Msa1377230:CDS
TGATGTGGTAAAGAATAGTA+TGG 0.431239 tig0019874:-109352 None:intergenic
ACAAGATGATTAACATTGGT+TGG 0.436739 tig0019874:-109429 None:intergenic
TATCTTTAACCTATGATATG+AGG 0.437399 tig0019874:-111331 None:intergenic
TTCTCTTGCATAGCAGAACT+TGG 0.451670 tig0019874:+109987 Msa1377230:CDS
TGGATTATAGGTTGATTTGA+GGG 0.458285 tig0019874:+110272 Msa1377230:intron
CACTTTCTAAATATGATCAT+AGG 0.459356 tig0019874:+109784 Msa1377230:CDS
ACGGACGGTTTCAGTGTCAT+GGG 0.470966 tig0019874:+110482 Msa1377230:CDS
AGTAATATCTGGGTGATGTA+AGG 0.472243 tig0019874:-110343 None:intergenic
CATAGGCTTTGGTACTATGT+TGG 0.476035 tig0019874:+109801 Msa1377230:CDS
ACTCTAACTCTGATCAACTA+AGG 0.476907 tig0019874:+111103 Msa1377230:CDS
AGTGTCTTAACAAGATTCTC+AGG 0.478782 tig0019874:-109765 None:intergenic
AATGTATCTACCGGTAAAGA+TGG 0.484588 tig0019874:+110675 Msa1377230:CDS
GCTTATTCGGAGAATTATGA+AGG 0.496075 tig0019874:+109825 Msa1377230:CDS
ATTCTGCCATATATAAAACT+TGG 0.506828 tig0019874:-111251 None:intergenic
AAACTGTTTGCTACGATAGA+CGG 0.526094 tig0019874:+110454 Msa1377230:CDS
ATCTTTATGGAAGTGATGCT+AGG 0.526264 tig0019874:+109961 Msa1377230:CDS
TTTATTACCTGGTGAAAACC+GGG 0.543349 tig0019874:-110029 None:intergenic
TCTTCAGAGACACAAATTTG+AGG 0.546907 tig0019874:-109600 None:intergenic
AAAATATGCCAAACTTTGGT+GGG 0.551639 tig0019874:+109494 Msa1377230:CDS
TCTTTATGGAAGTGATGCTA+GGG 0.553538 tig0019874:+109962 Msa1377230:CDS
TGCAAGAAACATTCAAGCCA+TGG 0.553702 tig0019874:+110559 Msa1377230:CDS
CTCTAACTCTGATCAACTAA+GGG 0.555856 tig0019874:+111104 Msa1377230:CDS
TTGCATCAAGTGGAAAATCA+TGG 0.559886 tig0019874:+109460 Msa1377230:CDS
TTGGTTGGATCAGATTCAGT+AGG 0.565623 tig0019874:-109414 None:intergenic
GATTATAGGTTGATTTGAGG+GGG 0.570849 tig0019874:+110274 Msa1377230:intron
TATCTAGACAATGTATCTAC+CGG 0.573162 tig0019874:+110666 Msa1377230:CDS
TTTAGTTGCAGACTCCAAGA+AGG 0.573265 tig0019874:+111061 Msa1377230:intron
GGATTATAGGTTGATTTGAG+GGG 0.576528 tig0019874:+110273 Msa1377230:intron
AAGGCAGTGTTGTGATGTGT+TGG 0.577881 tig0019874:+111080 Msa1377230:CDS
AAGATAGTAACAATTAACAT+TGG 0.584281 tig0019874:+109375 Msa1377230:CDS
AGATTGCATCAGTAATATCT+GGG 0.584721 tig0019874:-110353 None:intergenic
TAATGATTTCATGACTAACA+AGG 0.590494 tig0019874:-109253 None:intergenic
AGAAACATTCAAGCCATGGA+AGG 0.593946 tig0019874:+110563 Msa1377230:CDS
ATCGCTGATCTCAAACCACC+TGG 0.602809 tig0019874:-109651 None:intergenic
AATGATTTCATGACTAACAA+GGG 0.607221 tig0019874:-109252 None:intergenic
AATTGTTACTATCTTTGATG+TGG 0.613033 tig0019874:-109367 None:intergenic
TGAATCATTCAGATGTTAGG+TGG 0.614320 tig0019874:+109709 Msa1377230:CDS
TGGGTGATGTAAGGATAACA+AGG 0.618676 tig0019874:-110334 None:intergenic
ATATGGCAGAATTCAGCAGA+GGG 0.631593 tig0019874:+111262 Msa1377230:three_prime_UTR
CGGACGGTTTCAGTGTCATG+GGG 0.643044 tig0019874:+110483 Msa1377230:CDS
CTTATTCGGAGAATTATGAA+GGG 0.653583 tig0019874:+109826 Msa1377230:CDS
AACTACACATATAGACCAGG+TGG 0.655770 tig0019874:+109636 Msa1377230:CDS
CTTTCACAACACGTGCCACG+CGG 0.665049 tig0019874:-109674 None:intergenic
TATATGGCAGAATTCAGCAG+AGG 0.669719 tig0019874:+111261 Msa1377230:three_prime_UTR
GTTGGATTAACATATGAACC+CGG 0.669948 tig0019874:+110011 Msa1377230:CDS
TTTAACTACACATATAGACC+AGG 0.706253 tig0019874:+109633 Msa1377230:CDS
GATTTCATGACTAACAAGGG+AGG 0.712821 tig0019874:-109249 None:intergenic
GGGTGATGTAAGGATAACAA+GGG 0.728977 tig0019874:-110333 None:intergenic
TTTGAGATCAGCGATCCGCG+TGG 0.777646 tig0019874:+109659 Msa1377230:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATAATCATGTTTAAA+GGG - tig0019874:109139-109158 None:intergenic 10.0%
!! AAAAAAATAATCATGTTTAA+AGG - tig0019874:109140-109159 None:intergenic 10.0%
!! AAAAAATAATCATGTTTAAA+GGG - tig0019874:109139-109158 None:intergenic 10.0%
!! AAAAAAATAATCATGTTTAA+AGG - tig0019874:109140-109159 None:intergenic 10.0%
!! AAAGTAAATTATTTATTACC+TGG - tig0019874:110043-110062 None:intergenic 15.0%
!!! TTTGATTTAATGAATTTTGT+TGG + tig0019874:110060-110079 Msa1377230:intron 15.0%
!!! AAAATTTAGTCTCTAAAATT+AGG - tig0019874:110203-110222 None:intergenic 15.0%
!! TATTAATGTGATTATGAAAT+TGG + tig0019874:110252-110271 Msa1377230:intron 15.0%
!!! ATTTTGAATTTGTCATATTA+GGG - tig0019874:110380-110399 None:intergenic 15.0%
!!! AATATGGTTTTTTACATTTT+AGG + tig0019874:110981-111000 Msa1377230:intron 15.0%
!! ATAGAATCAAAAGATTTATT+TGG - tig0019874:111461-111480 None:intergenic 15.0%
!! AAAGTAAATTATTTATTACC+TGG - tig0019874:110043-110062 None:intergenic 15.0%
!!! TTTGATTTAATGAATTTTGT+TGG + tig0019874:110060-110079 Msa1377230:intron 15.0%
!!! AAAATTTAGTCTCTAAAATT+AGG - tig0019874:110203-110222 None:intergenic 15.0%
!! TATTAATGTGATTATGAAAT+TGG + tig0019874:110252-110271 Msa1377230:intron 15.0%
!!! ATTTTGAATTTGTCATATTA+GGG - tig0019874:110380-110399 None:intergenic 15.0%
!!! AATATGGTTTTTTACATTTT+AGG + tig0019874:110981-111000 Msa1377230:intron 15.0%
!! ATAGAATCAAAAGATTTATT+TGG - tig0019874:111461-111480 None:intergenic 15.0%
!! AAGATAGTAACAATTAACAT+TGG + tig0019874:109375-109394 Msa1377230:CDS 20.0%
!! AAAAACAAGATGATTAACAT+TGG - tig0019874:109436-109455 None:intergenic 20.0%
!!! AATGTTAATCATCTTGTTTT+TGG + tig0019874:109435-109454 Msa1377230:CDS 20.0%
!! ACATTAATAGAGGATAAATT+TGG - tig0019874:110241-110260 None:intergenic 20.0%
!! TTTCATAATCACATTAATAG+AGG - tig0019874:110251-110270 None:intergenic 20.0%
!! TGATTATGAAATTGGATTAT+AGG + tig0019874:110260-110279 Msa1377230:intron 20.0%
!!! GATTTTGAATTTGTCATATT+AGG - tig0019874:110381-110400 None:intergenic 20.0%
!!! AAATTTTAGGTCTTTTACAA+GGG - tig0019874:110644-110663 None:intergenic 20.0%
!!! AAAATTTTAGGTCTTTTACA+AGG - tig0019874:110645-110664 None:intergenic 20.0%
!!! TTGTCTAGATAGAAAATTTT+AGG - tig0019874:110657-110676 None:intergenic 20.0%
!! TCGTTTGAACAATTATAAAA+AGG - tig0019874:110723-110742 None:intergenic 20.0%
!!! TTTAAAATCATGCTGAAATA+TGG + tig0019874:110965-110984 Msa1377230:intron 20.0%
!! CTAATTCATAAACTATACTT+TGG + tig0019874:111036-111055 Msa1377230:intron 20.0%
!! ATGTTAAATCTCTTTCAATA+TGG + tig0019874:111191-111210 Msa1377230:three_prime_UTR 20.0%
!! TTAGAACTTTGATACATTAA+AGG + tig0019874:111412-111431 Msa1377230:three_prime_UTR 20.0%
!! AAGATAGTAACAATTAACAT+TGG + tig0019874:109375-109394 Msa1377230:CDS 20.0%
!! AAAAACAAGATGATTAACAT+TGG - tig0019874:109436-109455 None:intergenic 20.0%
!!! AATGTTAATCATCTTGTTTT+TGG + tig0019874:109435-109454 Msa1377230:CDS 20.0%
!! ACATTAATAGAGGATAAATT+TGG - tig0019874:110241-110260 None:intergenic 20.0%
!! TTTCATAATCACATTAATAG+AGG - tig0019874:110251-110270 None:intergenic 20.0%
!! TGATTATGAAATTGGATTAT+AGG + tig0019874:110260-110279 Msa1377230:intron 20.0%
!!! GATTTTGAATTTGTCATATT+AGG - tig0019874:110381-110400 None:intergenic 20.0%
!!! AAATTTTAGGTCTTTTACAA+GGG - tig0019874:110644-110663 None:intergenic 20.0%
!!! AAAATTTTAGGTCTTTTACA+AGG - tig0019874:110645-110664 None:intergenic 20.0%
!!! TTGTCTAGATAGAAAATTTT+AGG - tig0019874:110657-110676 None:intergenic 20.0%
!! TCGTTTGAACAATTATAAAA+AGG - tig0019874:110723-110742 None:intergenic 20.0%
!!! TTTAAAATCATGCTGAAATA+TGG + tig0019874:110965-110984 Msa1377230:intron 20.0%
!! CTAATTCATAAACTATACTT+TGG + tig0019874:111036-111055 Msa1377230:intron 20.0%
!! ATGTTAAATCTCTTTCAATA+TGG + tig0019874:111191-111210 Msa1377230:three_prime_UTR 20.0%
!! TTAGAACTTTGATACATTAA+AGG + tig0019874:111412-111431 Msa1377230:three_prime_UTR 20.0%
! AATGATTTCATGACTAACAA+GGG - tig0019874:109255-109274 None:intergenic 25.0%
! TAATGATTTCATGACTAACA+AGG - tig0019874:109256-109275 None:intergenic 25.0%
!! AATTAATTTGGTTACAGGTT+TGG - tig0019874:109286-109305 None:intergenic 25.0%
!! AGTGAAATTAATTTGGTTAC+AGG - tig0019874:109291-109310 None:intergenic 25.0%
! AGATGAGAGTGAAATTAATT+TGG - tig0019874:109298-109317 None:intergenic 25.0%
! AATTGTTACTATCTTTGATG+TGG - tig0019874:109370-109389 None:intergenic 25.0%
!!! TTGGCATATTTTTTCCTATT+AGG - tig0019874:109486-109505 None:intergenic 25.0%
! AATTGAATCATTCAGATGTT+AGG + tig0019874:109706-109725 Msa1377230:CDS 25.0%
! CACTTTCTAAATATGATCAT+AGG + tig0019874:109784-109803 Msa1377230:CDS 25.0%
!!! TTTAGCTAATGTTTTAGCTA+AGG + tig0019874:109908-109927 Msa1377230:CDS 25.0%
! GAAAGATATTCTCATCTTTA+TGG + tig0019874:109948-109967 Msa1377230:CDS 25.0%
!! CTAATTAGTCTCCAAAATTT+AGG + tig0019874:110144-110163 Msa1377230:intron 25.0%
!!! ACATTCATGGTTTTAAATTG+TGG + tig0019874:110833-110852 Msa1377230:intron 25.0%
!! CACATTTTACTGCAATATAA+AGG - tig0019874:110871-110890 None:intergenic 25.0%
!! TTGACATGTAAAGAATTTTG+TGG - tig0019874:110920-110939 None:intergenic 25.0%
!! TTCAGCATGATTTTAAATTG+CGG - tig0019874:110962-110981 None:intergenic 25.0%
!!! TTAGGATGATGTTTTTACTT+TGG + tig0019874:110999-111018 Msa1377230:intron 25.0%
!!! GTCATTCCAAGTTTTATATA+TGG + tig0019874:111245-111264 Msa1377230:three_prime_UTR 25.0%
! ATTCTGCCATATATAAAACT+TGG - tig0019874:111254-111273 None:intergenic 25.0%
! TATCTTTAACCTATGATATG+AGG - tig0019874:111334-111353 None:intergenic 25.0%
! AATGATTTCATGACTAACAA+GGG - tig0019874:109255-109274 None:intergenic 25.0%
! TAATGATTTCATGACTAACA+AGG - tig0019874:109256-109275 None:intergenic 25.0%
!! AATTAATTTGGTTACAGGTT+TGG - tig0019874:109286-109305 None:intergenic 25.0%
!! AGTGAAATTAATTTGGTTAC+AGG - tig0019874:109291-109310 None:intergenic 25.0%
! AGATGAGAGTGAAATTAATT+TGG - tig0019874:109298-109317 None:intergenic 25.0%
! AATTGTTACTATCTTTGATG+TGG - tig0019874:109370-109389 None:intergenic 25.0%
!!! TTGGCATATTTTTTCCTATT+AGG - tig0019874:109486-109505 None:intergenic 25.0%
! AATTGAATCATTCAGATGTT+AGG + tig0019874:109706-109725 Msa1377230:CDS 25.0%
! CACTTTCTAAATATGATCAT+AGG + tig0019874:109784-109803 Msa1377230:CDS 25.0%
!!! TTTAGCTAATGTTTTAGCTA+AGG + tig0019874:109908-109927 Msa1377230:CDS 25.0%
! GAAAGATATTCTCATCTTTA+TGG + tig0019874:109948-109967 Msa1377230:CDS 25.0%
!! CTAATTAGTCTCCAAAATTT+AGG + tig0019874:110144-110163 Msa1377230:intron 25.0%
!!! ACATTCATGGTTTTAAATTG+TGG + tig0019874:110833-110852 Msa1377230:intron 25.0%
!! CACATTTTACTGCAATATAA+AGG - tig0019874:110871-110890 None:intergenic 25.0%
!! TTGACATGTAAAGAATTTTG+TGG - tig0019874:110920-110939 None:intergenic 25.0%
!! TTCAGCATGATTTTAAATTG+CGG - tig0019874:110962-110981 None:intergenic 25.0%
!!! TTAGGATGATGTTTTTACTT+TGG + tig0019874:110999-111018 Msa1377230:intron 25.0%
!!! GTCATTCCAAGTTTTATATA+TGG + tig0019874:111245-111264 Msa1377230:three_prime_UTR 25.0%
! ATTCTGCCATATATAAAACT+TGG - tig0019874:111254-111273 None:intergenic 25.0%
! TATCTTTAACCTATGATATG+AGG - tig0019874:111334-111353 None:intergenic 25.0%
TGATGTGGTAAAGAATAGTA+TGG - tig0019874:109355-109374 None:intergenic 30.0%
ACAAGATGATTAACATTGGT+TGG - tig0019874:109432-109451 None:intergenic 30.0%
GGAAAAAATATGCCAAACTT+TGG + tig0019874:109490-109509 Msa1377230:CDS 30.0%
AAAAATATGCCAAACTTTGG+TGG + tig0019874:109493-109512 Msa1377230:CDS 30.0%
AAAATATGCCAAACTTTGGT+GGG + tig0019874:109494-109513 Msa1377230:CDS 30.0%
!! TATGAAAGGTTGTGTTTTTG+TGG + tig0019874:109524-109543 Msa1377230:CDS 30.0%
GAACAGAATCATCACTATTA+AGG - tig0019874:109581-109600 None:intergenic 30.0%
TTTAACTACACATATAGACC+AGG + tig0019874:109633-109652 Msa1377230:CDS 30.0%
CTAAATATGATCATAGGCTT+TGG + tig0019874:109790-109809 Msa1377230:CDS 30.0%
CTTATTCGGAGAATTATGAA+GGG + tig0019874:109826-109845 Msa1377230:CDS 30.0%
ATTTATTACCTGGTGAAAAC+CGG - tig0019874:110033-110052 None:intergenic 30.0%
! ACTCCATATATTGGTGATTT+AGG + tig0019874:110085-110104 Msa1377230:intron 30.0%
GTTCCTAAATCACCAATATA+TGG - tig0019874:110091-110110 None:intergenic 30.0%
!! TTGGATTATAGGTTGATTTG+AGG + tig0019874:110271-110290 Msa1377230:intron 30.0%
!! TGGATTATAGGTTGATTTGA+GGG + tig0019874:110272-110291 Msa1377230:intron 30.0%
AGATTGCATCAGTAATATCT+GGG - tig0019874:110356-110375 None:intergenic 30.0%
AAGATTGCATCAGTAATATC+TGG - tig0019874:110357-110376 None:intergenic 30.0%
ATGGAAGGAAAAACAAGTTT+GGG + tig0019874:110578-110597 Msa1377230:CDS 30.0%
TATCTAGACAATGTATCTAC+CGG + tig0019874:110666-110685 Msa1377230:CDS 30.0%
GCAGTAAAATGTGAAAAATG+CGG + tig0019874:110878-110897 Msa1377230:intron 30.0%
TGATGTGGTAAAGAATAGTA+TGG - tig0019874:109355-109374 None:intergenic 30.0%
ACAAGATGATTAACATTGGT+TGG - tig0019874:109432-109451 None:intergenic 30.0%
GGAAAAAATATGCCAAACTT+TGG + tig0019874:109490-109509 Msa1377230:CDS 30.0%
AAAAATATGCCAAACTTTGG+TGG + tig0019874:109493-109512 Msa1377230:CDS 30.0%
AAAATATGCCAAACTTTGGT+GGG + tig0019874:109494-109513 Msa1377230:CDS 30.0%
!! TATGAAAGGTTGTGTTTTTG+TGG + tig0019874:109524-109543 Msa1377230:CDS 30.0%
GAACAGAATCATCACTATTA+AGG - tig0019874:109581-109600 None:intergenic 30.0%
TTTAACTACACATATAGACC+AGG + tig0019874:109633-109652 Msa1377230:CDS 30.0%
CTAAATATGATCATAGGCTT+TGG + tig0019874:109790-109809 Msa1377230:CDS 30.0%
CTTATTCGGAGAATTATGAA+GGG + tig0019874:109826-109845 Msa1377230:CDS 30.0%
ATTTATTACCTGGTGAAAAC+CGG - tig0019874:110033-110052 None:intergenic 30.0%
! ACTCCATATATTGGTGATTT+AGG + tig0019874:110085-110104 Msa1377230:intron 30.0%
GTTCCTAAATCACCAATATA+TGG - tig0019874:110091-110110 None:intergenic 30.0%
!! TTGGATTATAGGTTGATTTG+AGG + tig0019874:110271-110290 Msa1377230:intron 30.0%
!! TGGATTATAGGTTGATTTGA+GGG + tig0019874:110272-110291 Msa1377230:intron 30.0%
AGATTGCATCAGTAATATCT+GGG - tig0019874:110356-110375 None:intergenic 30.0%
AAGATTGCATCAGTAATATC+TGG - tig0019874:110357-110376 None:intergenic 30.0%
ATGGAAGGAAAAACAAGTTT+GGG + tig0019874:110578-110597 Msa1377230:CDS 30.0%
TATCTAGACAATGTATCTAC+CGG + tig0019874:110666-110685 Msa1377230:CDS 30.0%
GCAGTAAAATGTGAAAAATG+CGG + tig0019874:110878-110897 Msa1377230:intron 30.0%
!!! GTTTTTGGAATTGCATCAAG+TGG + tig0019874:109450-109469 Msa1377230:CDS 35.0%
TTGCATCAAGTGGAAAATCA+TGG + tig0019874:109460-109479 Msa1377230:CDS 35.0%
! ATTTTTGTCCCACCAAAGTT+TGG - tig0019874:109505-109524 None:intergenic 35.0%
TGGTGGGACAAAAATATGAA+AGG + tig0019874:109510-109529 Msa1377230:CDS 35.0%
!!! TTGTTGTCATTTTCTTCAGG+TGG - tig0019874:109558-109577 None:intergenic 35.0%
!!! AGGTTGTTGTCATTTTCTTC+AGG - tig0019874:109561-109580 None:intergenic 35.0%
TCTTCAGAGACACAAATTTG+AGG - tig0019874:109603-109622 None:intergenic 35.0%
TGAATCATTCAGATGTTAGG+TGG + tig0019874:109709-109728 Msa1377230:CDS 35.0%
AGTGTCTTAACAAGATTCTC+AGG - tig0019874:109768-109787 None:intergenic 35.0%
GTACTATGTTGGAGCTTATT+CGG + tig0019874:109812-109831 Msa1377230:CDS 35.0%
GCTTATTCGGAGAATTATGA+AGG + tig0019874:109825-109844 Msa1377230:CDS 35.0%
!!! TCAAGCTTTTGGTTTTGGAA+TGG + tig0019874:109851-109870 Msa1377230:CDS 35.0%
!!! TTTGGTTTTGGAATGGCTTT+TGG + tig0019874:109858-109877 Msa1377230:CDS 35.0%
ATCTTTATGGAAGTGATGCT+AGG + tig0019874:109961-109980 Msa1377230:CDS 35.0%
TCTTTATGGAAGTGATGCTA+GGG + tig0019874:109962-109981 Msa1377230:CDS 35.0%
GTTGGATTAACATATGAACC+CGG + tig0019874:110011-110030 Msa1377230:CDS 35.0%
TTTATTACCTGGTGAAAACC+GGG - tig0019874:110032-110051 None:intergenic 35.0%
!! TTGTTGGTGACTCCATATAT+TGG + tig0019874:110076-110095 Msa1377230:intron 35.0%
! GTCTCCAAAATTTAGGATTC+CGG + tig0019874:110151-110170 Msa1377230:intron 35.0%
! GAATCCGGAATCCTAAATTT+TGG - tig0019874:110158-110177 None:intergenic 35.0%
!! TAGTCTCTAAAATTAGGACG+CGG - tig0019874:110197-110216 None:intergenic 35.0%
!! GGATTATAGGTTGATTTGAG+GGG + tig0019874:110273-110292 Msa1377230:intron 35.0%
!! GATTATAGGTTGATTTGAGG+GGG + tig0019874:110274-110293 Msa1377230:intron 35.0%
AAGGATAACAAGGGACTTAA+TGG - tig0019874:110327-110346 None:intergenic 35.0%
AGTAATATCTGGGTGATGTA+AGG - tig0019874:110346-110365 None:intergenic 35.0%
! AAACTGTTTGCTACGATAGA+CGG + tig0019874:110454-110473 Msa1377230:CDS 35.0%
!! CTGGTAAAAGCACATTGTTT+TGG - tig0019874:110527-110546 None:intergenic 35.0%
!! CAAACTTGTTTTTCCTTCCA+TGG - tig0019874:110579-110598 None:intergenic 35.0%
CATGGAAGGAAAAACAAGTT+TGG + tig0019874:110577-110596 Msa1377230:CDS 35.0%
AATGTATCTACCGGTAAAGA+TGG + tig0019874:110675-110694 Msa1377230:CDS 35.0%
GCTAATGATTCCATCTTTAC+CGG - tig0019874:110688-110707 None:intergenic 35.0%
!! GTTTTAGACACTGACATTCA+TGG + tig0019874:110820-110839 Msa1377230:intron 35.0%
ACTCTAACTCTGATCAACTA+AGG + tig0019874:111103-111122 Msa1377230:CDS 35.0%
CTCTAACTCTGATCAACTAA+GGG + tig0019874:111104-111123 Msa1377230:CDS 35.0%
CTTACTACACCTCATATCAT+AGG + tig0019874:111322-111341 Msa1377230:three_prime_UTR 35.0%
!!! GTTTTTGGAATTGCATCAAG+TGG + tig0019874:109450-109469 Msa1377230:CDS 35.0%
TTGCATCAAGTGGAAAATCA+TGG + tig0019874:109460-109479 Msa1377230:CDS 35.0%
! ATTTTTGTCCCACCAAAGTT+TGG - tig0019874:109505-109524 None:intergenic 35.0%
TGGTGGGACAAAAATATGAA+AGG + tig0019874:109510-109529 Msa1377230:CDS 35.0%
!!! TTGTTGTCATTTTCTTCAGG+TGG - tig0019874:109558-109577 None:intergenic 35.0%
!!! AGGTTGTTGTCATTTTCTTC+AGG - tig0019874:109561-109580 None:intergenic 35.0%
TCTTCAGAGACACAAATTTG+AGG - tig0019874:109603-109622 None:intergenic 35.0%
TGAATCATTCAGATGTTAGG+TGG + tig0019874:109709-109728 Msa1377230:CDS 35.0%
AGTGTCTTAACAAGATTCTC+AGG - tig0019874:109768-109787 None:intergenic 35.0%
GTACTATGTTGGAGCTTATT+CGG + tig0019874:109812-109831 Msa1377230:CDS 35.0%
GCTTATTCGGAGAATTATGA+AGG + tig0019874:109825-109844 Msa1377230:CDS 35.0%
!!! TCAAGCTTTTGGTTTTGGAA+TGG + tig0019874:109851-109870 Msa1377230:CDS 35.0%
!!! TTTGGTTTTGGAATGGCTTT+TGG + tig0019874:109858-109877 Msa1377230:CDS 35.0%
ATCTTTATGGAAGTGATGCT+AGG + tig0019874:109961-109980 Msa1377230:CDS 35.0%
TCTTTATGGAAGTGATGCTA+GGG + tig0019874:109962-109981 Msa1377230:CDS 35.0%
GTTGGATTAACATATGAACC+CGG + tig0019874:110011-110030 Msa1377230:CDS 35.0%
TTTATTACCTGGTGAAAACC+GGG - tig0019874:110032-110051 None:intergenic 35.0%
!! TTGTTGGTGACTCCATATAT+TGG + tig0019874:110076-110095 Msa1377230:intron 35.0%
! GTCTCCAAAATTTAGGATTC+CGG + tig0019874:110151-110170 Msa1377230:intron 35.0%
! GAATCCGGAATCCTAAATTT+TGG - tig0019874:110158-110177 None:intergenic 35.0%
!! TAGTCTCTAAAATTAGGACG+CGG - tig0019874:110197-110216 None:intergenic 35.0%
!! GGATTATAGGTTGATTTGAG+GGG + tig0019874:110273-110292 Msa1377230:intron 35.0%
!! GATTATAGGTTGATTTGAGG+GGG + tig0019874:110274-110293 Msa1377230:intron 35.0%
AAGGATAACAAGGGACTTAA+TGG - tig0019874:110327-110346 None:intergenic 35.0%
AGTAATATCTGGGTGATGTA+AGG - tig0019874:110346-110365 None:intergenic 35.0%
! AAACTGTTTGCTACGATAGA+CGG + tig0019874:110454-110473 Msa1377230:CDS 35.0%
!! CTGGTAAAAGCACATTGTTT+TGG - tig0019874:110527-110546 None:intergenic 35.0%
!! CAAACTTGTTTTTCCTTCCA+TGG - tig0019874:110579-110598 None:intergenic 35.0%
CATGGAAGGAAAAACAAGTT+TGG + tig0019874:110577-110596 Msa1377230:CDS 35.0%
AATGTATCTACCGGTAAAGA+TGG + tig0019874:110675-110694 Msa1377230:CDS 35.0%
GCTAATGATTCCATCTTTAC+CGG - tig0019874:110688-110707 None:intergenic 35.0%
!! GTTTTAGACACTGACATTCA+TGG + tig0019874:110820-110839 Msa1377230:intron 35.0%
ACTCTAACTCTGATCAACTA+AGG + tig0019874:111103-111122 Msa1377230:CDS 35.0%
CTCTAACTCTGATCAACTAA+GGG + tig0019874:111104-111123 Msa1377230:CDS 35.0%
CTTACTACACCTCATATCAT+AGG + tig0019874:111322-111341 Msa1377230:three_prime_UTR 35.0%
GATTTCATGACTAACAAGGG+AGG - tig0019874:109252-109271 None:intergenic 40.0%
TTGGTTGGATCAGATTCAGT+AGG - tig0019874:109417-109436 None:intergenic 40.0%
GTGGAAAATCATGGCCTAAT+AGG + tig0019874:109469-109488 Msa1377230:CDS 40.0%
AACTACACATATAGACCAGG+TGG + tig0019874:109636-109655 Msa1377230:CDS 40.0%
GATGTTAGGTGGTATGTGTT+TGG + tig0019874:109720-109739 Msa1377230:CDS 40.0%
! CATAGGCTTTGGTACTATGT+TGG + tig0019874:109801-109820 Msa1377230:CDS 40.0%
! TATGAAGGGTCTCAAGCTTT+TGG + tig0019874:109840-109859 Msa1377230:CDS 40.0%
TTCTCTTGCATAGCAGAACT+TGG + tig0019874:109987-110006 Msa1377230:CDS 40.0%
GATTTAGGAACCATGTTCTC+AGG + tig0019874:110100-110119 Msa1377230:intron 40.0%
CCAATATAGTCCTGAGAACA+TGG - tig0019874:110113-110132 None:intergenic 40.0%
CCATGTTCTCAGGACTATAT+TGG + tig0019874:110110-110129 Msa1377230:intron 40.0%
! GGGGAACATCTTTGGTTTAT+TGG + tig0019874:110293-110312 Msa1377230:CDS 40.0%
GGGTGATGTAAGGATAACAA+GGG - tig0019874:110336-110355 None:intergenic 40.0%
TGGGTGATGTAAGGATAACA+AGG - tig0019874:110337-110356 None:intergenic 40.0%
!! CGTAGCAAACAGTTTGTTGT+AGG - tig0019874:110449-110468 None:intergenic 40.0%
! TCTTGCACTCTAAGAACATC+TGG - tig0019874:110546-110565 None:intergenic 40.0%
TGCAAGAAACATTCAAGCCA+TGG + tig0019874:110559-110578 Msa1377230:CDS 40.0%
AGAAACATTCAAGCCATGGA+AGG + tig0019874:110563-110582 Msa1377230:CDS 40.0%
AAGGAAAAACAAGTTTGGGC+AGG + tig0019874:110582-110601 Msa1377230:CDS 40.0%
GAATCTGGAAGTGATCAAAG+TGG + tig0019874:110758-110777 Msa1377230:intron 40.0%
! GTTAGACCTTGATAGCAAAC+AGG + tig0019874:110791-110810 Msa1377230:intron 40.0%
!! GCATTACCTGTTTGCTATCA+AGG - tig0019874:110800-110819 None:intergenic 40.0%
TTTAGTTGCAGACTCCAAGA+AGG + tig0019874:111061-111080 Msa1377230:intron 40.0%
TATATGGCAGAATTCAGCAG+AGG + tig0019874:111261-111280 Msa1377230:three_prime_UTR 40.0%
ATATGGCAGAATTCAGCAGA+GGG + tig0019874:111262-111281 Msa1377230:three_prime_UTR 40.0%
GATTTCATGACTAACAAGGG+AGG - tig0019874:109252-109271 None:intergenic 40.0%
TTGGTTGGATCAGATTCAGT+AGG - tig0019874:109417-109436 None:intergenic 40.0%
GTGGAAAATCATGGCCTAAT+AGG + tig0019874:109469-109488 Msa1377230:CDS 40.0%
AACTACACATATAGACCAGG+TGG + tig0019874:109636-109655 Msa1377230:CDS 40.0%
GATGTTAGGTGGTATGTGTT+TGG + tig0019874:109720-109739 Msa1377230:CDS 40.0%
! CATAGGCTTTGGTACTATGT+TGG + tig0019874:109801-109820 Msa1377230:CDS 40.0%
! TATGAAGGGTCTCAAGCTTT+TGG + tig0019874:109840-109859 Msa1377230:CDS 40.0%
TTCTCTTGCATAGCAGAACT+TGG + tig0019874:109987-110006 Msa1377230:CDS 40.0%
GATTTAGGAACCATGTTCTC+AGG + tig0019874:110100-110119 Msa1377230:intron 40.0%
CCAATATAGTCCTGAGAACA+TGG - tig0019874:110113-110132 None:intergenic 40.0%
CCATGTTCTCAGGACTATAT+TGG + tig0019874:110110-110129 Msa1377230:intron 40.0%
! GGGGAACATCTTTGGTTTAT+TGG + tig0019874:110293-110312 Msa1377230:CDS 40.0%
GGGTGATGTAAGGATAACAA+GGG - tig0019874:110336-110355 None:intergenic 40.0%
TGGGTGATGTAAGGATAACA+AGG - tig0019874:110337-110356 None:intergenic 40.0%
!! CGTAGCAAACAGTTTGTTGT+AGG - tig0019874:110449-110468 None:intergenic 40.0%
! TCTTGCACTCTAAGAACATC+TGG - tig0019874:110546-110565 None:intergenic 40.0%
TGCAAGAAACATTCAAGCCA+TGG + tig0019874:110559-110578 Msa1377230:CDS 40.0%
AGAAACATTCAAGCCATGGA+AGG + tig0019874:110563-110582 Msa1377230:CDS 40.0%
AAGGAAAAACAAGTTTGGGC+AGG + tig0019874:110582-110601 Msa1377230:CDS 40.0%
GAATCTGGAAGTGATCAAAG+TGG + tig0019874:110758-110777 Msa1377230:intron 40.0%
! GTTAGACCTTGATAGCAAAC+AGG + tig0019874:110791-110810 Msa1377230:intron 40.0%
!! GCATTACCTGTTTGCTATCA+AGG - tig0019874:110800-110819 None:intergenic 40.0%
TTTAGTTGCAGACTCCAAGA+AGG + tig0019874:111061-111080 Msa1377230:intron 40.0%
TATATGGCAGAATTCAGCAG+AGG + tig0019874:111261-111280 Msa1377230:three_prime_UTR 40.0%
ATATGGCAGAATTCAGCAGA+GGG + tig0019874:111262-111281 Msa1377230:three_prime_UTR 40.0%
!!! GGGTCTCAAGCTTTTGGTTT+TGG + tig0019874:109846-109865 Msa1377230:CDS 45.0%
!!! GGTTTTGGAATGGCTTTTGG+TGG + tig0019874:109861-109880 Msa1377230:CDS 45.0%
!! TTTGGAATGGCTTTTGGTGG+AGG + tig0019874:109864-109883 Msa1377230:CDS 45.0%
!! TGCATAGCAGAACTTGGTGT+TGG + tig0019874:109993-110012 Msa1377230:CDS 45.0%
! ATATGAACCCGGTTTTCACC+AGG + tig0019874:110022-110041 Msa1377230:CDS 45.0%
GATTTGAGGGGGAACATCTT+TGG + tig0019874:110285-110304 Msa1377230:CDS 45.0%
! GCTACGATAGACGGTTTTCA+CGG + tig0019874:110463-110482 Msa1377230:CDS 45.0%
CAAGACATCGTCGAAGAATC+TGG + tig0019874:110743-110762 Msa1377230:CDS 45.0%
ACATCACAACACTGCCTTCT+TGG - tig0019874:111078-111097 None:intergenic 45.0%
AAGGCAGTGTTGTGATGTGT+TGG + tig0019874:111080-111099 Msa1377230:CDS 45.0%
AGCAGTGCTCTTCAAGAATC+TGG - tig0019874:111221-111240 None:intergenic 45.0%
!!! GGGTCTCAAGCTTTTGGTTT+TGG + tig0019874:109846-109865 Msa1377230:CDS 45.0%
!!! GGTTTTGGAATGGCTTTTGG+TGG + tig0019874:109861-109880 Msa1377230:CDS 45.0%
!! TTTGGAATGGCTTTTGGTGG+AGG + tig0019874:109864-109883 Msa1377230:CDS 45.0%
!! TGCATAGCAGAACTTGGTGT+TGG + tig0019874:109993-110012 Msa1377230:CDS 45.0%
! ATATGAACCCGGTTTTCACC+AGG + tig0019874:110022-110041 Msa1377230:CDS 45.0%
GATTTGAGGGGGAACATCTT+TGG + tig0019874:110285-110304 Msa1377230:CDS 45.0%
! GCTACGATAGACGGTTTTCA+CGG + tig0019874:110463-110482 Msa1377230:CDS 45.0%
CAAGACATCGTCGAAGAATC+TGG + tig0019874:110743-110762 Msa1377230:CDS 45.0%
ACATCACAACACTGCCTTCT+TGG - tig0019874:111078-111097 None:intergenic 45.0%
AAGGCAGTGTTGTGATGTGT+TGG + tig0019874:111080-111099 Msa1377230:CDS 45.0%
AGCAGTGCTCTTCAAGAATC+TGG - tig0019874:111221-111240 None:intergenic 45.0%
!!! ATAATTTTTAGTAATTTTAA+AGG + tig0019874:111513-111532 Msa1377230:three_prime_UTR 5.0%
ATCGCTGATCTCAAACCACC+TGG - tig0019874:109654-109673 None:intergenic 50.0%
ATTAGGACGCGGATTCCCTA+CGG - tig0019874:110186-110205 None:intergenic 50.0%
! CGATAGACGGTTTTCACGGA+CGG + tig0019874:110467-110486 Msa1377230:CDS 50.0%
ACGGACGGTTTCAGTGTCAT+GGG + tig0019874:110482-110501 Msa1377230:CDS 50.0%
ATCGCTGATCTCAAACCACC+TGG - tig0019874:109654-109673 None:intergenic 50.0%
ATTAGGACGCGGATTCCCTA+CGG - tig0019874:110186-110205 None:intergenic 50.0%
! CGATAGACGGTTTTCACGGA+CGG + tig0019874:110467-110486 Msa1377230:CDS 50.0%
ACGGACGGTTTCAGTGTCAT+GGG + tig0019874:110482-110501 Msa1377230:CDS 50.0%
! TTTGAGATCAGCGATCCGCG+TGG + tig0019874:109659-109678 Msa1377230:CDS 55.0%
CTTTCACAACACGTGCCACG+CGG - tig0019874:109677-109696 None:intergenic 55.0%
! GGAATGGCTTTTGGTGGAGG+TGG + tig0019874:109867-109886 Msa1377230:CDS 55.0%
ATTCCGGATTCCCTGACCGT+AGG + tig0019874:110167-110186 Msa1377230:intron 55.0%
TTCCGGATTCCCTGACCGTA+GGG + tig0019874:110168-110187 Msa1377230:intron 55.0%
TTCCCTACGGTCAGGGAATC+CGG - tig0019874:110173-110192 None:intergenic 55.0%
CACGGACGGTTTCAGTGTCA+TGG + tig0019874:110481-110500 Msa1377230:CDS 55.0%
CGGACGGTTTCAGTGTCATG+GGG + tig0019874:110483-110502 Msa1377230:CDS 55.0%
GCGGTCTGCAACTGCAATTG+CGG - tig0019874:110943-110962 None:intergenic 55.0%
! TTTGAGATCAGCGATCCGCG+TGG + tig0019874:109659-109678 Msa1377230:CDS 55.0%
CTTTCACAACACGTGCCACG+CGG - tig0019874:109677-109696 None:intergenic 55.0%
! GGAATGGCTTTTGGTGGAGG+TGG + tig0019874:109867-109886 Msa1377230:CDS 55.0%
ATTCCGGATTCCCTGACCGT+AGG + tig0019874:110167-110186 Msa1377230:intron 55.0%
TTCCGGATTCCCTGACCGTA+GGG + tig0019874:110168-110187 Msa1377230:intron 55.0%
TTCCCTACGGTCAGGGAATC+CGG - tig0019874:110173-110192 None:intergenic 55.0%
CACGGACGGTTTCAGTGTCA+TGG + tig0019874:110481-110500 Msa1377230:CDS 55.0%
CGGACGGTTTCAGTGTCATG+GGG + tig0019874:110483-110502 Msa1377230:CDS 55.0%
GCGGTCTGCAACTGCAATTG+CGG - tig0019874:110943-110962 None:intergenic 55.0%
ACGCGGATTCCCTACGGTCA+GGG - tig0019874:110180-110199 None:intergenic 60.0%
ACGCGGATTCCCTACGGTCA+GGG - tig0019874:110180-110199 None:intergenic 60.0%
GACGCGGATTCCCTACGGTC+AGG - tig0019874:110181-110200 None:intergenic 65.0%
GACGCGGATTCCCTACGGTC+AGG - tig0019874:110181-110200 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0019874 gene 109132 111534 109132 ID=Msa1377230;Name=Msa1377230
tig0019874 mRNA 109132 111534 109132 ID=Msa1377230-mRNA-1;Parent=Msa1377230;Name=Msa1377230-mRNA-1;_AED=0.05;_eAED=0.05;_QI=132|0.5|0.66|1|0.5|0.33|3|358|458
tig0019874 exon 109132 110043 109132 ID=Msa1377230-mRNA-1:exon:5515;Parent=Msa1377230-mRNA-1
tig0019874 exon 110282 110767 110282 ID=Msa1377230-mRNA-1:exon:5516;Parent=Msa1377230-mRNA-1
tig0019874 exon 111066 111534 111066 ID=Msa1377230-mRNA-1:exon:5517;Parent=Msa1377230-mRNA-1
tig0019874 five_prime_UTR 109132 109263 109132 ID=Msa1377230-mRNA-1:five_prime_utr;Parent=Msa1377230-mRNA-1
tig0019874 CDS 109264 110043 109264 ID=Msa1377230-mRNA-1:cds;Parent=Msa1377230-mRNA-1
tig0019874 CDS 110282 110767 110282 ID=Msa1377230-mRNA-1:cds;Parent=Msa1377230-mRNA-1
tig0019874 CDS 111066 111176 111066 ID=Msa1377230-mRNA-1:cds;Parent=Msa1377230-mRNA-1
tig0019874 three_prime_UTR 111177 111534 111177 ID=Msa1377230-mRNA-1:three_prime_utr;Parent=Msa1377230-mRNA-1
Gene Sequence

>Msa1377230

ATGAAATCATTAATCAAAACCAAACCTGTAACCAAATTAATTTCACTCTCATCTTCATTTTGTGCAATTTCTCTCTTTATATTTATTTCCATACTATTCTTTACCACATCAAAGATAGTAACAATTAACATTGGTTCTTCTTTACTACAACCTACTGAATCTGATCCAACCAATGTTAATCATCTTGTTTTTGGAATTGCATCAAGTGGAAAATCATGGCCTAATAGGAAAAAATATGCCAAACTTTGGTGGGACAAAAATATGAAAGGTTGTGTTTTTGTGGATAATCTTCCACCTGAAGAAAATGACAACAACCTTAATAGTGATGATTCTGTTCCTCAAATTTGTGTCTCTGAAGACACTTCAAAGTTTAACTACACATATAGACCAGGTGGTTTGAGATCAGCGATCCGCGTGGCACGTGTTGTGAAAGAAACTGTTGAATTGAATCATTCAGATGTTAGGTGGTATGTGTTTGGTGATGATGACACAATTTTCTTTCCTGAGAATCTTGTTAAGACACTTTCTAAATATGATCATAGGCTTTGGTACTATGTTGGAGCTTATTCGGAGAATTATGAAGGGTCTCAAGCTTTTGGTTTTGGAATGGCTTTTGGTGGAGGTGGTTTTGCTTTAAGTGCTTCTTTAGCTAATGTTTTAGCTAAGGTTTTTGATTCTTGTATTGAAAGATATTCTCATCTTTATGGAAGTGATGCTAGGGTGTTCTCTTGCATAGCAGAACTTGGTGTTGGATTAACATATGAACCCGGTTTTCACCAGGTTGATTTGAGGGGGAACATCTTTGGTTTATTGGCTGCACATCCATTAAGTCCCTTGTTATCCTTACATCACCCAGATATTACTGATGCAATCTTCCCTAATATGACAAATTCAAAATCACTACAACATTTATTTGAAGCTGCAAATGTTGATTCACAAAGAATCCTACAACAAACTGTTTGCTACGATAGACGGTTTTCACGGACGGTTTCAGTGTCATGGGGCTATGCTGTTCAAGTATTCCAAAACAATGTGCTTTTACCAGATGTTCTTAGAGTGCAAGAAACATTCAAGCCATGGAAGGAAAAACAAGTTTGGGCAGGAATATATACTTTTAGCAAAAGAGAACTTCATCATGACCCTTGTAAAAGACCTAAAATTTTCTATCTAGACAATGTATCTACCGGTAAAGATGGAATCATTAGCAACTACACGAAACCTTTTTATAATTGTTCAAACGACAAGACATCGTCGAAGAATCTGGAATTGCAGACTCCAAGAAGGCAGTGTTGTGATGTGTTGGACTCTAACTCTGATCAACTAAGGGAAATTACAATTAGAGAGTGCAAATATGAAGAATTGATTTATATGCATTGA
Protein sequence

>Msa1377230

MKSLIKTKPVTKLISLSSSFCAISLFIFISILFFTTSKIVTINIGSSLLQPTESDPTNVNHLVFGIASSGKSWPNRKKYAKLWWDKNMKGCVFVDNLPPEENDNNLNSDDSVPQICVSEDTSKFNYTYRPGGLRSAIRVARVVKETVELNHSDVRWYVFGDDDTIFFPENLVKTLSKYDHRLWYYVGAYSENYEGSQAFGFGMAFGGGGFALSASLANVLAKVFDSCIERYSHLYGSDARVFSCIAELGVGLTYEPGFHQVDLRGNIFGLLAAHPLSPLLSLHHPDITDAIFPNMTNSKSLQHLFEAANVDSQRILQQTVCYDRRFSRTVSVSWGYAVQVFQNNVLLPDVLRVQETFKPWKEKQVWAGIYTFSKRELHHDPCKRPKIFYLDNVSTGKDGIISNYTKPFYNCSNDKTSSKNLELQTPRRQCCDVLDSNSDQLREITIRECKYEELIYMH*