Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0406200 | RHN51853.1 | 42.763 | 456 | 128 | 10 | 337 | 661 | 53 | 506 | 9.12e-101 | 327 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0406200 | A0A396HGY8 | 42.763 | 456 | 128 | 10 | 337 | 661 | 53 | 506 | 4.36e-101 | 327 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004860 | Msa0406200 | 0.806307 | 8.764912e-50 | -8.615850e-47 |
| Msa0044540 | Msa0406200 | -0.806593 | 7.630120e-50 | -8.615850e-47 |
| Msa0051770 | Msa0406200 | 0.807710 | 4.424941e-50 | -8.615850e-47 |
| Msa0056030 | Msa0406200 | 0.837232 | 5.870537e-57 | -8.615850e-47 |
| Msa0109690 | Msa0406200 | 0.800411 | 1.459340e-48 | -8.615850e-47 |
| Msa0129510 | Msa0406200 | 0.809089 | 2.247555e-50 | -8.615850e-47 |
| Msa0231690 | Msa0406200 | 0.811961 | 5.388696e-51 | -8.615850e-47 |
| Msa0406200 | Msa0419520 | 0.819548 | 1.096475e-52 | -8.615850e-47 |
| Msa0406200 | Msa0510350 | 0.804463 | 2.134384e-49 | -8.615850e-47 |
| Msa0406200 | Msa0545120 | 0.807060 | 6.078381e-50 | -8.615850e-47 |
| Msa0406200 | Msa0698400 | 0.802810 | 4.701581e-49 | -8.615850e-47 |
| Msa0406200 | Msa1388860 | 0.817816 | 2.710294e-52 | -8.615850e-47 |
| Msa0346480 | Msa0406200 | 0.802872 | 4.564216e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0406200 | MtrunA17_Chr6g0473661 | 42.763 | 456 | 128 | 10 | 337 | 661 | 53 | 506 | 8.39e-105 | 327 |
| Msa0406200 | MtrunA17_Chr6g0473661 | 29.255 | 188 | 117 | 6 | 454 | 631 | 13 | 194 | 1.74e-13 | 73.6 |
| Msa0406200 | MtrunA17_Chr6g0473661 | 57.143 | 56 | 24 | 0 | 300 | 355 | 266 | 321 | 6.19e-13 | 71.6 |
| Msa0406200 | MtrunA17_Chr6g0473651 | 50.741 | 270 | 91 | 4 | 351 | 579 | 95 | 363 | 1.40e-83 | 268 |
| Msa0406200 | MtrunA17_Chr6g0473651 | 58.929 | 56 | 23 | 0 | 300 | 355 | 235 | 290 | 8.32e-14 | 73.6 |
| Msa0406200 | MtrunA17_Chr6g0473921 | 49.286 | 140 | 39 | 2 | 549 | 656 | 1 | 140 | 1.60e-40 | 144 |
| Msa0406200 | MtrunA17_Chr6g0473921 | 33.708 | 89 | 59 | 0 | 359 | 447 | 27 | 115 | 5.14e-16 | 75.5 |
| Msa0406200 | MtrunA17_Chr3g0097121 | 71.264 | 87 | 25 | 0 | 121 | 207 | 1 | 87 | 4.08e-36 | 130 |
| Msa0406200 | MtrunA17_Chr1g0156191 | 52.713 | 129 | 29 | 2 | 522 | 618 | 7 | 135 | 2.97e-33 | 124 |
| Msa0406200 | MtrunA17_Chr1g0156191 | 36.471 | 85 | 54 | 0 | 350 | 434 | 51 | 135 | 1.31e-13 | 68.6 |
| Msa0406200 | MtrunA17_Chr6g0462511 | 49.123 | 114 | 25 | 3 | 539 | 619 | 1 | 114 | 1.19e-25 | 102 |
| Msa0406200 | MtrunA17_Chr6g0462511 | 32.979 | 94 | 59 | 2 | 344 | 436 | 25 | 115 | 6.42e-12 | 62.8 |
| Msa0406200 | MtrunA17_Chr6g0473641 | 60.000 | 65 | 23 | 1 | 597 | 661 | 1 | 62 | 3.57e-22 | 90.5 |
| Msa0406200 | MtrunA17_Chr6g0473911 | 63.235 | 68 | 11 | 1 | 246 | 299 | 2 | 69 | 1.62e-19 | 83.2 |
| Msa0406200 | MtrunA17_Chr1g0207921 | 29.944 | 177 | 108 | 3 | 272 | 433 | 19 | 194 | 2.80e-19 | 86.7 |
| Msa0406200 | MtrunA17_Chr8g0365871 | 45.070 | 71 | 38 | 1 | 358 | 428 | 18 | 87 | 1.11e-13 | 67.4 |
| Msa0406200 | MtrunA17_Chr8g0366201 | 41.860 | 86 | 48 | 1 | 353 | 438 | 2 | 85 | 2.10e-13 | 67.0 |
| Msa0406200 | MtrunA17_Chr7g0232921 | 56.604 | 53 | 23 | 0 | 250 | 302 | 6 | 58 | 4.92e-13 | 68.6 |
| Msa0406200 | MtrunA17_Chr1g0193281 | 34.343 | 99 | 54 | 2 | 272 | 359 | 22 | 120 | 6.73e-12 | 65.1 |
| Msa0406200 | MtrunA17_Chr4g0042631 | 45.312 | 64 | 26 | 1 | 266 | 320 | 34 | 97 | 1.72e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 148 sgRNAs with CRISPR-Local
Find 636 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCAAGGCCTCAAAGAAAT+TGG | 0.115736 | 3_2:-42462866 | Msa0406200:CDS |
| CTATGAACATTGCTGATTTA+AGG | 0.160523 | 3_2:-42454397 | Msa0406200:CDS |
| ACCTCTACCTCATTATTTCT+TGG | 0.236080 | 3_2:+42456848 | None:intergenic |
| ATTGCAGAATTTAGTTTATC+AGG | 0.238237 | 3_2:-42455658 | Msa0406200:intron |
| CGTGCGTTACAGCTAGCTTT+AGG | 0.262590 | 3_2:+42456290 | None:intergenic |
| GTTCCCAAAGTGTTCATTCT+TGG | 0.270363 | 3_2:+42458232 | None:intergenic |
| TGCCTAACGGTGAGGGATTA+AGG | 0.275152 | 3_2:-42462286 | Msa0406200:CDS |
| CATGGAAATTTCGAAGATTC+TGG | 0.281014 | 3_2:-42462219 | Msa0406200:CDS |
| CACTGGACTCTCTTCCTAAC+TGG | 0.283570 | 3_2:+42454338 | None:intergenic |
| ATAGGAGGAACACATTTATT+AGG | 0.284579 | 3_2:+42454796 | None:intergenic |
| GATTTCTACAACATTGATAT+TGG | 0.285700 | 3_2:-42456767 | Msa0406200:CDS |
| GTGCGTTACAGCTAGCTTTA+GGG | 0.286663 | 3_2:+42456291 | None:intergenic |
| CATCAAACCTATTTGTTCAT+AGG | 0.290954 | 3_2:+42456727 | None:intergenic |
| ACTCTTACCTATGAACAAAT+AGG | 0.305163 | 3_2:-42456734 | Msa0406200:intron |
| GATTATGTCCTTGTGCTTGC+AGG | 0.305807 | 3_2:+42456225 | None:intergenic |
| TGCACACGTTTCTTATGGTT+GGG | 0.310652 | 3_2:-42459399 | Msa0406200:CDS |
| TGCTCTATTGTTTGTTCAAA+TGG | 0.315320 | 3_2:-42462557 | Msa0406200:CDS |
| CAAGAACATGTTCGAGGTTA+AGG | 0.317039 | 3_2:-42454958 | Msa0406200:CDS |
| AATTGTGCACACGTTTCTTA+TGG | 0.320127 | 3_2:-42459404 | Msa0406200:CDS |
| CAGATCATGTGCTATGGCCT+TGG | 0.337263 | 3_2:-42459592 | Msa0406200:CDS |
| GCAACAAACGTGAATGAATC+AGG | 0.348761 | 3_2:+42462577 | None:intergenic |
| CAGAGGCGTTAGGAAGGATT+TGG | 0.349208 | 3_2:-42457404 | Msa0406200:CDS |
| GATCAAAGTCGTTGATTACT+TGG | 0.353170 | 3_2:-42456428 | Msa0406200:CDS |
| GAATGGGTGGTTTGGCTTGA+AGG | 0.358568 | 3_2:-42456789 | Msa0406200:CDS |
| ACCTCGAACATGTTCTTGTT+AGG | 0.359147 | 3_2:+42454963 | None:intergenic |
| GGAATGGTATTCTTCATATA+AGG | 0.364171 | 3_2:-42454460 | Msa0406200:CDS |
| TTGATCTCAGTTTCCTTAGT+TGG | 0.368759 | 3_2:+42456445 | None:intergenic |
| TGCCTAGATGCTGCTGAGGC+AGG | 0.370072 | 3_2:-42456181 | Msa0406200:CDS |
| CAAACAAATTTAAGACATCT+TGG | 0.370571 | 3_2:+42462941 | None:intergenic |
| GTGCTATGGCCTTGGGAGTC+AGG | 0.371801 | 3_2:-42459584 | Msa0406200:CDS |
| TGACATCGACTCTGGATATC+TGG | 0.373468 | 3_2:-42454695 | Msa0406200:CDS |
| CCTTTGCAGTGCATTCATAA+AGG | 0.376742 | 3_2:-42454431 | Msa0406200:CDS |
| AAATAATGAGGTAGAGGTTC+GGG | 0.380132 | 3_2:-42456843 | Msa0406200:CDS |
| CCTTGTGCTTGCAGGGAATA+GGG | 0.384926 | 3_2:+42456233 | None:intergenic |
| TTCTTCAAGAATGGGTGGTT+TGG | 0.386728 | 3_2:-42456797 | Msa0406200:CDS |
| AACAAAGTATTCTTCAAGAA+TGG | 0.387611 | 3_2:-42456806 | Msa0406200:CDS |
| GGAGTGATCATCTTTGATAT+AGG | 0.388625 | 3_2:+42454778 | None:intergenic |
| AATGGTGGATGCTTCTTTGA+AGG | 0.391002 | 3_2:-42462539 | Msa0406200:intron |
| AATTTGATGATCGATCTCTT+TGG | 0.393759 | 3_2:-42462757 | Msa0406200:CDS |
| TTCAAAATCGGAGGTGGGTG+GGG | 0.397294 | 3_2:-42456352 | Msa0406200:CDS |
| GCTCTATAGTTTGTGAAGTC+TGG | 0.397928 | 3_2:+42462191 | None:intergenic |
| ATCAAGGCCTCAAAGAAATT+GGG | 0.399448 | 3_2:-42462865 | Msa0406200:CDS |
| AGATCATGTGCTATGGCCTT+GGG | 0.409945 | 3_2:-42459591 | Msa0406200:CDS |
| AGAAGGTATGTGTCTTCATT+AGG | 0.413719 | 3_2:+42462892 | None:intergenic |
| CAACATTGATATTGGTGCTT+GGG | 0.414236 | 3_2:-42456759 | Msa0406200:CDS |
| TCAGGTTGCTTCTTGCTTGA+AGG | 0.415111 | 3_2:-42459566 | Msa0406200:CDS |
| TTTGAAGGATTGGAGGTGAC+TGG | 0.416212 | 3_2:-42454553 | Msa0406200:intron |
| GTGCACACGTTTCTTATGGT+TGG | 0.417559 | 3_2:-42459400 | Msa0406200:CDS |
| AATGAATTGGTGTTCAAAAT+CGG | 0.418504 | 3_2:-42456364 | Msa0406200:CDS |
| ATGGCTGAAGAGATTGATAT+TGG | 0.420995 | 3_2:-42462329 | Msa0406200:CDS |
| ATCGCCATGCTGCCATCATT+TGG | 0.421002 | 3_2:+42454757 | None:intergenic |
| TCAAAGAAATTGGGTTTACT+TGG | 0.424015 | 3_2:-42462856 | Msa0406200:CDS |
| TTGCTTGGAAGTGCTCATTT+CGG | 0.424691 | 3_2:-42456402 | Msa0406200:CDS |
| TCCTTGTGCTTGCAGGGAAT+AGG | 0.429042 | 3_2:+42456232 | None:intergenic |
| TATGTCTTCAACTCTAAGTA+TGG | 0.429978 | 3_2:+42462831 | None:intergenic |
| AAGTAAACCCAATTTCTTTG+AGG | 0.431983 | 3_2:+42462858 | None:intergenic |
| CTTATGTGCAGCGCGTAACT+TGG | 0.437374 | 3_2:-42454525 | Msa0406200:CDS |
| ACTTCTCGCAGTGCCCAGTT+AGG | 0.447865 | 3_2:-42454352 | Msa0406200:CDS |
| TCAACAGTTCAAGGCAATAC+TGG | 0.454484 | 3_2:-42457439 | Msa0406200:intron |
| TCAGAGTGCATTGCCAACTA+AGG | 0.455280 | 3_2:-42456458 | Msa0406200:CDS |
| GAAATAATGAGGTAGAGGTT+CGG | 0.458277 | 3_2:-42456844 | Msa0406200:CDS |
| TTGAGGCCTTGATGAAAAGA+AGG | 0.459610 | 3_2:+42462875 | None:intergenic |
| GCCTAGATGCTGCTGAGGCA+GGG | 0.460290 | 3_2:-42456180 | Msa0406200:CDS |
| GATAGCTGAATCACATTTGT+GGG | 0.464015 | 3_2:+42454644 | None:intergenic |
| ACAAAGTATTCTTCAAGAAT+GGG | 0.467715 | 3_2:-42456805 | Msa0406200:CDS |
| TGATTTAAGGCATGTGTACC+AGG | 0.468839 | 3_2:-42454384 | Msa0406200:CDS |
| ACAACATTGATATTGGTGCT+TGG | 0.474591 | 3_2:-42456760 | Msa0406200:CDS |
| GATTGCGCAATATATATTGC+AGG | 0.475133 | 3_2:-42462262 | Msa0406200:CDS |
| TGAAACCAAATAAAATAACT+TGG | 0.477785 | 3_2:-42462376 | Msa0406200:CDS |
| TCTTATGGTTGGGGTAATGA+TGG | 0.478616 | 3_2:-42459389 | Msa0406200:CDS |
| TTGATTACTTGGGATTTGCT+TGG | 0.481601 | 3_2:-42456417 | Msa0406200:CDS |
| CTGGGCACTGCGAGAAGTAA+TGG | 0.484915 | 3_2:+42454357 | None:intergenic |
| CAGAATCTTCGAAATTTCCA+TGG | 0.491616 | 3_2:+42462220 | None:intergenic |
| GACTTCACAAACTATAGAGC+TGG | 0.494400 | 3_2:-42462188 | Msa0406200:CDS |
| AGGGAATAGGGACATGCCTC+AGG | 0.494745 | 3_2:+42456245 | None:intergenic |
| GTTCAAAATCGGAGGTGGGT+GGG | 0.498607 | 3_2:-42456353 | Msa0406200:CDS |
| AGACAGATCAGGAGTGGAAG+TGG | 0.502826 | 3_2:-42454824 | Msa0406200:intron |
| CACATTATTGCAAAGCCCAC+TGG | 0.502855 | 3_2:+42454321 | None:intergenic |
| GAGCCAAGAATGAACACTTT+GGG | 0.504993 | 3_2:-42458235 | Msa0406200:CDS |
| AGAGCCAAGAATGAACACTT+TGG | 0.505329 | 3_2:-42458236 | Msa0406200:CDS |
| ACATCTTCTGACATCGACTC+TGG | 0.507031 | 3_2:-42454703 | Msa0406200:CDS |
| ATTATGTCCTTGTGCTTGCA+GGG | 0.507142 | 3_2:+42456226 | None:intergenic |
| TGTCGAGGCAGAAAATGAAT+TGG | 0.513746 | 3_2:-42456377 | Msa0406200:CDS |
| GCACACGTTTCTTATGGTTG+GGG | 0.514535 | 3_2:-42459398 | Msa0406200:CDS |
| GGGAGATTGACAGAGGCGTT+AGG | 0.515400 | 3_2:-42457414 | Msa0406200:CDS |
| ATATCGCACCAGCAGCTTCA+CGG | 0.517086 | 3_2:+42458189 | None:intergenic |
| AAGATGATCACTCCAAATGA+TGG | 0.517981 | 3_2:-42454769 | Msa0406200:CDS |
| ACCCTGCCTCAGCAGCATCT+AGG | 0.519643 | 3_2:+42456179 | None:intergenic |
| CTCCTTAATCCCTCACCGTT+AGG | 0.520920 | 3_2:+42462284 | None:intergenic |
| ATCAAAGTCGTTGATTACTT+GGG | 0.521003 | 3_2:-42456427 | Msa0406200:CDS |
| TTACAGCTAGCTTTAGGGGA+TGG | 0.523709 | 3_2:+42456296 | None:intergenic |
| AGATAGCTGAATCACATTTG+TGG | 0.527393 | 3_2:+42454643 | None:intergenic |
| GATGATCGATCTCTTTGGAA+AGG | 0.532099 | 3_2:-42462752 | Msa0406200:intron |
| GATCTCTTTGCAAGGCGCGT+AGG | 0.536164 | 3_2:-42456330 | Msa0406200:CDS |
| GCCCTTCAGATCATGTGCTA+TGG | 0.544681 | 3_2:-42459598 | Msa0406200:intron |
| TATATCTGAAGGCTTGTCAT+TGG | 0.544895 | 3_2:+42462786 | None:intergenic |
| TCCAAGAAATAATGAGGTAG+AGG | 0.546351 | 3_2:-42456849 | Msa0406200:CDS |
| AGTAAATTGCCTAACGGTGA+GGG | 0.552096 | 3_2:-42462293 | Msa0406200:CDS |
| ACTGGACTCTCTTCCTAACT+GGG | 0.553386 | 3_2:+42454339 | None:intergenic |
| GTCAAGGACCGTGAAGCTGC+TGG | 0.569242 | 3_2:-42458197 | Msa0406200:CDS |
| TTGCTGTCACCGAAAATACA+AGG | 0.570074 | 3_2:-42454481 | Msa0406200:CDS |
| TGCGTTACAGCTAGCTTTAG+GGG | 0.570487 | 3_2:+42456292 | None:intergenic |
| CCCTATTCCCTGCAAGCACA+AGG | 0.570771 | 3_2:-42456233 | Msa0406200:CDS |
| GATTGACAGAGGCGTTAGGA+AGG | 0.571222 | 3_2:-42457410 | Msa0406200:CDS |
| TGTTCAAAATCGGAGGTGGG+TGG | 0.571285 | 3_2:-42456354 | Msa0406200:CDS |
| GTGATCATCTTTGATATAGG+AGG | 0.572297 | 3_2:+42454781 | None:intergenic |
| CAGTTCAAGGCAATACTGGT+GGG | 0.572471 | 3_2:-42457435 | Msa0406200:CDS |
| GTTGCTTTCGTGTGTTGACA+TGG | 0.572625 | 3_2:-42462348 | Msa0406200:CDS |
| TCTATTGTTTGTTCAAATGG+TGG | 0.573465 | 3_2:-42462554 | Msa0406200:CDS |
| TCCTAACAAGAACATGTTCG+AGG | 0.576589 | 3_2:-42454964 | Msa0406200:CDS |
| TTGCTTGAAGGAAATCTGCA+TGG | 0.578808 | 3_2:-42459554 | Msa0406200:CDS |
| CAACAAACGTGAATGAATCA+GGG | 0.580010 | 3_2:+42462578 | None:intergenic |
| AAGTATTCTTCAAGAATGGG+TGG | 0.580631 | 3_2:-42456802 | Msa0406200:CDS |
| CAGTAAATTGCCTAACGGTG+AGG | 0.583046 | 3_2:-42462294 | Msa0406200:CDS |
| CACTCCAAATGATGGCAGCA+TGG | 0.583679 | 3_2:-42454761 | Msa0406200:CDS |
| ACTGATATCTAATGAGCAGA+AGG | 0.589865 | 3_2:-42455632 | Msa0406200:intron |
| TTGGTGTTCAAAATCGGAGG+TGG | 0.594982 | 3_2:-42456358 | Msa0406200:CDS |
| GAAACCAAATAAAATAACTT+GGG | 0.597988 | 3_2:-42462375 | Msa0406200:CDS |
| ATGTGATCCAAGAAATAATG+AGG | 0.600386 | 3_2:-42456855 | Msa0406200:CDS |
| GAACTTTACTATGTGTGTCA+AGG | 0.604975 | 3_2:-42458213 | Msa0406200:CDS |
| CAAGGACATAATCAAGCCCA+TGG | 0.605129 | 3_2:-42456215 | Msa0406200:CDS |
| GTCACCGAAAATACAAGGAA+TGG | 0.606721 | 3_2:-42454476 | Msa0406200:CDS |
| TGGGTGGGGATCTCTTTGCA+AGG | 0.608753 | 3_2:-42456338 | Msa0406200:CDS |
| AAGAAGCAACCTGACTCCCA+AGG | 0.609216 | 3_2:+42459575 | None:intergenic |
| CCTTTATGAATGCACTGCAA+AGG | 0.610680 | 3_2:+42454431 | None:intergenic |
| CATAAAAGACAGATCAGGAG+TGG | 0.611114 | 3_2:-42454830 | Msa0406200:intron |
| GCGAGAAGTAATGGTTAACC+TGG | 0.615011 | 3_2:+42454366 | None:intergenic |
| ACAGTTCAAGGCAATACTGG+TGG | 0.616471 | 3_2:-42457436 | Msa0406200:intron |
| AGTTAGGAAGAGAGTCCAGT+GGG | 0.621104 | 3_2:-42454336 | Msa0406200:CDS |
| AGTTTGCCTAGATGCTGCTG+AGG | 0.622272 | 3_2:-42456185 | Msa0406200:CDS |
| GCAGCGCGTAACTTGGTCAA+AGG | 0.623770 | 3_2:-42454518 | Msa0406200:CDS |
| TATGTCGTACTCCATGTGAA+AGG | 0.628216 | 3_2:+42457369 | None:intergenic |
| TGGTGTTCAAAATCGGAGGT+GGG | 0.630322 | 3_2:-42456357 | Msa0406200:CDS |
| GTGCTCATTTCGGATTGTCG+AGG | 0.634872 | 3_2:-42456392 | Msa0406200:CDS |
| CTATAGAGCTGGAATTAGTG+TGG | 0.637231 | 3_2:-42462177 | Msa0406200:intron |
| AGTTCAAGGCAATACTGGTG+GGG | 0.645677 | 3_2:-42457434 | Msa0406200:CDS |
| TTGCTTGAAGGAAATCTGCA+TGG | 0.646719 | 3_2:-42459429 | Msa0406200:intron |
| TAACTTTAGAACCTTTCACA+TGG | 0.650952 | 3_2:-42457380 | Msa0406200:CDS |
| GAATTGGTGTTCAAAATCGG+AGG | 0.651998 | 3_2:-42456361 | Msa0406200:CDS |
| GGTGCGATATGTTTGATGAA+AGG | 0.666358 | 3_2:-42458176 | Msa0406200:intron |
| CAGTTAGGAAGAGAGTCCAG+TGG | 0.670342 | 3_2:-42454337 | Msa0406200:CDS |
| AGAACAAAGTTGTCTACCTG+AGG | 0.673391 | 3_2:-42456261 | Msa0406200:CDS |
| AACAAACGTGAATGAATCAG+GGG | 0.682281 | 3_2:+42462579 | None:intergenic |
| TGGTAAATGCAGTTTCTGCG+AGG | 0.688871 | 3_2:-42454675 | Msa0406200:CDS |
| GCAAACAGTAAATTGCCTAA+CGG | 0.689862 | 3_2:-42462299 | Msa0406200:CDS |
| AAAGCTAGCTGTAACGCACG+AGG | 0.709573 | 3_2:-42456287 | Msa0406200:CDS |
| ACTGGTGGGGAGATTGACAG+AGG | 0.726497 | 3_2:-42457421 | Msa0406200:CDS |
| TATTCCTTAGCAAAACACGA+CGG | 0.776301 | 3_2:+42455023 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATCTAAGATATATTTAAA+AGG | + | chr3_2:42456094-42456113 | None:intergenic | 10.0% |
| !!! | TAGATTAATTAGATTATTTT+TGG | - | chr3_2:42456107-42456126 | Msa0406200:intron | 10.0% |
| !!! | TAGATTAATTAGATTATTTT+TGG | - | chr3_2:42456107-42456126 | Msa0406200:intron | 10.0% |
| !! | TATCTATTAAAAAAAATAAG+GGG | + | chr3_2:42457253-42457272 | None:intergenic | 10.0% |
| !!! | TACAAACTATTTTTTTTAAT+CGG | + | chr3_2:42457489-42457508 | None:intergenic | 10.0% |
| !! | TACAAATACATTAAAAAAAA+AGG | - | chr3_2:42458701-42458720 | Msa0406200:intron | 10.0% |
| !! | TTAAAATAATATCCAAAATA+AGG | + | chr3_2:42461949-42461968 | None:intergenic | 10.0% |
| !! | TTTATGTGCATATTATTATT+AGG | + | chr3_2:42455196-42455215 | None:intergenic | 15.0% |
| !! | ATCTATTAAAAAAAATAAGG+GGG | + | chr3_2:42457252-42457271 | None:intergenic | 15.0% |
| !!! | TTTTATAATATTAAGATCAG+GGG | + | chr3_2:42457563-42457582 | None:intergenic | 15.0% |
| !!! | CTTTTATAATATTAAGATCA+GGG | + | chr3_2:42457564-42457583 | None:intergenic | 15.0% |
| !!! | TCTTTTATAATATTAAGATC+AGG | + | chr3_2:42457565-42457584 | None:intergenic | 15.0% |
| !!! | AATTTGTAATTTTAATTACG+CGG | + | chr3_2:42458114-42458133 | None:intergenic | 15.0% |
| !! | AAAATGGAATATAATAGAAA+TGG | + | chr3_2:42458396-42458415 | None:intergenic | 15.0% |
| !! | ATTAAAGCAGAAATTAAAAA+TGG | + | chr3_2:42458412-42458431 | None:intergenic | 15.0% |
| !! | TTGTTTAATACATTAACATA+TGG | - | chr3_2:42459637-42459656 | Msa0406200:intron | 15.0% |
| !!! | AAATTTTTTGTTAACATGAA+TGG | - | chr3_2:42460087-42460106 | Msa0406200:intron | 15.0% |
| !!! | AATTTTTTGTTAACATGAAT+GGG | - | chr3_2:42460088-42460107 | Msa0406200:intron | 15.0% |
| !! | ATATAATCGAACAATATAAA+AGG | + | chr3_2:42460738-42460757 | None:intergenic | 15.0% |
| !! | AGAAATCAGTTTATAAATTA+TGG | + | chr3_2:42461567-42461586 | None:intergenic | 15.0% |
| !!! | ATAATTTATAAACTGATTTC+TGG | - | chr3_2:42461566-42461585 | Msa0406200:intron | 15.0% |
| !!! | ATTTTATAAAAACTAATGTG+CGG | - | chr3_2:42461761-42461780 | Msa0406200:intron | 15.0% |
| !!! | AACTTACTTATTTTTGAAAT+AGG | - | chr3_2:42461967-42461986 | Msa0406200:intron | 15.0% |
| !!! | AAATTTTTGCATATATCTGA+AGG | + | chr3_2:42454523-42454542 | None:intergenic | 20.0% |
| !!! | ATACATATTTTTCTCTTTGA+TGG | + | chr3_2:42454605-42454624 | None:intergenic | 20.0% |
| !! | AAGAGAAAAATATGTATTTG+TGG | - | chr3_2:42454608-42454627 | Msa0406200:intron | 20.0% |
| !! | TGAAACCAAATAAAATAACT+TGG | - | chr3_2:42454919-42454938 | Msa0406200:intron | 20.0% |
| !! | GAAACCAAATAAAATAACTT+GGG | - | chr3_2:42454920-42454939 | Msa0406200:intron | 20.0% |
| !!! | AATTTTACAATTTCATGCAA+GGG | - | chr3_2:42455372-42455391 | Msa0406200:intron | 20.0% |
| !!! | TGTTATTTAACATTAGGAAT+TGG | + | chr3_2:42455685-42455704 | None:intergenic | 20.0% |
| !!! | AACAGATGTTATTTAACATT+AGG | + | chr3_2:42455691-42455710 | None:intergenic | 20.0% |
| !! | TCTATTAAAAAAAATAAGGG+GGG | + | chr3_2:42457251-42457270 | None:intergenic | 20.0% |
| !!! | ATTTGTAATTTTAATTACGC+GGG | + | chr3_2:42458113-42458132 | None:intergenic | 20.0% |
| !! | TAATCAATATTTGTAGTATG+TGG | - | chr3_2:42458510-42458529 | Msa0406200:intron | 20.0% |
| !! | CATTAAAAAAAAAGGTAAGA+CGG | - | chr3_2:42458709-42458728 | Msa0406200:intron | 20.0% |
| !! | ATTAAAAAAAAAGGTAAGAC+GGG | - | chr3_2:42458710-42458729 | Msa0406200:intron | 20.0% |
| !! | AGTCATATTTGAATTATCAA+TGG | + | chr3_2:42459210-42459229 | None:intergenic | 20.0% |
| !!! | GTATTTTTTTATCTCATGAA+AGG | - | chr3_2:42459281-42459300 | Msa0406200:intron | 20.0% |
| !! | AAAAGATTTCATGATATAAG+AGG | + | chr3_2:42459381-42459400 | None:intergenic | 20.0% |
| !!! | TGTATTTTTTATCTCATGAA+AGG | - | chr3_2:42459406-42459425 | Msa0406200:CDS | 20.0% |
| !! | TTAGTGTAATACATGTATAT+TGG | - | chr3_2:42460126-42460145 | Msa0406200:intron | 20.0% |
| !! | AAACACATCATAAAAAGAAA+TGG | + | chr3_2:42460176-42460195 | None:intergenic | 20.0% |
| !!! | ATTTCTTTTTATGATGTGTT+TGG | - | chr3_2:42460175-42460194 | Msa0406200:intron | 20.0% |
| !! | TCATTAATCTACATCAAATA+GGG | + | chr3_2:42460293-42460312 | None:intergenic | 20.0% |
| !! | ATCATTAATCTACATCAAAT+AGG | + | chr3_2:42460294-42460313 | None:intergenic | 20.0% |
| !! | ATGCATTAAGAATATATGTT+TGG | - | chr3_2:42460372-42460391 | Msa0406200:intron | 20.0% |
| !!! | TAAGAATATATGTTTGGTTT+TGG | - | chr3_2:42460378-42460397 | Msa0406200:intron | 20.0% |
| !! | AAATAAAATGCAAACTTCTT+TGG | + | chr3_2:42461384-42461403 | None:intergenic | 20.0% |
| !! | TTATCCTAAATAAACAAAGT+TGG | - | chr3_2:42461473-42461492 | Msa0406200:intron | 20.0% |
| !! | TATCCTAAATAAACAAAGTT+GGG | - | chr3_2:42461474-42461493 | Msa0406200:intron | 20.0% |
| !!! | CAGATAATACTATATTTTGA+AGG | - | chr3_2:42462727-42462746 | Msa0406200:intron | 20.0% |
| !!! | AATACTATATTTTGAAGGAT+TGG | - | chr3_2:42462732-42462751 | Msa0406200:intron | 20.0% |
| !! | CAAACAAATTTAAGACATCT+TGG | + | chr3_2:42454357-42454376 | None:intergenic | 25.0% |
| !!! | ACTTCCCAAGTTATTTTATT+TGG | + | chr3_2:42454927-42454946 | None:intergenic | 25.0% |
| ! | AAACTTTATTCTCAACAGAT+TGG | - | chr3_2:42455214-42455233 | Msa0406200:intron | 25.0% |
| ! | AACTTTATTCTCAACAGATT+GGG | - | chr3_2:42455215-42455234 | Msa0406200:intron | 25.0% |
| !! | CAATTTTACAATTTCATGCA+AGG | - | chr3_2:42455371-42455390 | Msa0406200:intron | 25.0% |
| !! | TTTTTCTACTTTGTTACTAG+TGG | - | chr3_2:42455420-42455439 | Msa0406200:intron | 25.0% |
| ! | ATACAAAATTAACCACAATC+AGG | + | chr3_2:42455527-42455546 | None:intergenic | 25.0% |
| ! | TGAAAAAATGAATATGCTTC+TGG | + | chr3_2:42455586-42455605 | None:intergenic | 25.0% |
| !!! | TACCGGTAAATTTTTTATGT+CGG | + | chr3_2:42456039-42456058 | None:intergenic | 25.0% |
| ! | ATCCACTAACTTATTAACAT+TGG | + | chr3_2:42456138-42456157 | None:intergenic | 25.0% |
| ! | AAGATATATTATTGCTGTGT+AGG | + | chr3_2:42456236-42456255 | None:intergenic | 25.0% |
| ! | ATCCACTAACTTATTAACAT+TGG | + | chr3_2:42456138-42456157 | None:intergenic | 25.0% |
| ! | AACTTCAGTGTTAGATTATA+TGG | - | chr3_2:42456526-42456545 | Msa0406200:intron | 25.0% |
| !!! | CTGAACTATTTTCTAAAACT+CGG | + | chr3_2:42456620-42456639 | None:intergenic | 25.0% |
| !! | TGCACAAAATCTTTTTACTA+CGG | + | chr3_2:42456724-42456743 | None:intergenic | 25.0% |
| !!! | TTAGTTTTAGTTCCAGTATA+GGG | + | chr3_2:42456900-42456919 | None:intergenic | 25.0% |
| !!! | ATTAGTTTTAGTTCCAGTAT+AGG | + | chr3_2:42456901-42456920 | None:intergenic | 25.0% |
| ! | ATACTGGAACTAAAACTAAT+TGG | - | chr3_2:42456901-42456920 | Msa0406200:intron | 25.0% |
| ! | TACTGGAACTAAAACTAATT+GGG | - | chr3_2:42456902-42456921 | Msa0406200:intron | 25.0% |
| ! | AAGTCAAATGGAAATCTAAA+TGG | + | chr3_2:42456984-42457003 | None:intergenic | 25.0% |
| !!! | ATTTGCTACATTTTCAAATC+TGG | + | chr3_2:42457070-42457089 | None:intergenic | 25.0% |
| ! | TGTAACCTATGTAACAAAAT+GGG | - | chr3_2:42457348-42457367 | Msa0406200:intron | 25.0% |
| !!! | TTTAGCTCATTTTCAACAAA+TGG | - | chr3_2:42457406-42457425 | Msa0406200:CDS | 25.0% |
| !! | TAAGAATTGCTGGTTAAATT+GGG | + | chr3_2:42457635-42457654 | None:intergenic | 25.0% |
| !! | ATAAGAATTGCTGGTTAAAT+TGG | + | chr3_2:42457636-42457655 | None:intergenic | 25.0% |
| ! | AATTTAACCAGCAATTCTTA+TGG | - | chr3_2:42457635-42457654 | Msa0406200:intron | 25.0% |
| !!! | TCATTTTTTCAATTCAAACC+CGG | + | chr3_2:42457670-42457689 | None:intergenic | 25.0% |
| ! | TGGAATATAATAGAAATGGA+TGG | + | chr3_2:42458392-42458411 | None:intergenic | 25.0% |
| ! | AAATATTATGTCTATGTTGC+TGG | - | chr3_2:42458452-42458471 | Msa0406200:intron | 25.0% |
| !!! | TTGCTGGTTTATGTATTTAT+TGG | - | chr3_2:42458468-42458487 | Msa0406200:intron | 25.0% |
| !!! | TGCTGGTTTATGTATTTATT+GGG | - | chr3_2:42458469-42458488 | Msa0406200:intron | 25.0% |
| ! | ATTTGTAGTATGTGGTTAAA+AGG | - | chr3_2:42458518-42458537 | Msa0406200:intron | 25.0% |
| ! | TTTGTCTTTCTATTTAAGTG+AGG | - | chr3_2:42458981-42459000 | Msa0406200:intron | 25.0% |
| ! | ACATTAACATATGGACATTA+TGG | - | chr3_2:42459646-42459665 | Msa0406200:intron | 25.0% |
| ! | GAAATGGATCATACATTAAA+TGG | + | chr3_2:42460160-42460179 | None:intergenic | 25.0% |
| ! | CATTAATCTACATCAAATAG+GGG | + | chr3_2:42460292-42460311 | None:intergenic | 25.0% |
| !!! | ATATATGTTTGGTTTTGGAA+AGG | - | chr3_2:42460383-42460402 | Msa0406200:intron | 25.0% |
| !! | AACAAAGTATTCTTCAAGAA+TGG | - | chr3_2:42460489-42460508 | Msa0406200:intron | 25.0% |
| !! | ACAAAGTATTCTTCAAGAAT+GGG | - | chr3_2:42460490-42460509 | Msa0406200:intron | 25.0% |
| ! | GATTTCTACAACATTGATAT+TGG | - | chr3_2:42460528-42460547 | Msa0406200:intron | 25.0% |
| ! | TTAATGTCAATGTAGTTCAT+TGG | - | chr3_2:42460646-42460665 | Msa0406200:intron | 25.0% |
| !! | AATGAATTGGTGTTCAAAAT+CGG | - | chr3_2:42460931-42460950 | Msa0406200:intron | 25.0% |
| !! | AACAAAACCAAATACCTTTT+GGG | + | chr3_2:42461146-42461165 | None:intergenic | 25.0% |
| !! | AAACAAAACCAAATACCTTT+TGG | + | chr3_2:42461147-42461166 | None:intergenic | 25.0% |
| !! | TATGCATTTTCTCAATTGAA+TGG | + | chr3_2:42461338-42461357 | None:intergenic | 25.0% |
| !! | ATTCCCAACTTTGTTTATTT+AGG | + | chr3_2:42461480-42461499 | None:intergenic | 25.0% |
| !! | ATTTATAAACTGATTTCTGG+AGG | - | chr3_2:42461569-42461588 | Msa0406200:intron | 25.0% |
| !! | ATTGCAGAATTTAGTTTATC+AGG | - | chr3_2:42461637-42461656 | Msa0406200:intron | 25.0% |
| !!! | TTAAGCTTTAAGTAATAGCA+GGG | + | chr3_2:42461804-42461823 | None:intergenic | 25.0% |
| ! | TGTACCATGAATAGAAATTA+AGG | + | chr3_2:42462018-42462037 | None:intergenic | 25.0% |
| !! | ATAACTAATTAGTTTCGGAA+TGG | + | chr3_2:42462114-42462133 | None:intergenic | 25.0% |
| ! | TTAAGAATGCATCAGTTATA+CGG | + | chr3_2:42462188-42462207 | None:intergenic | 25.0% |
| ! | ATACATAAAAAACATGTCGT+CGG | + | chr3_2:42462230-42462249 | None:intergenic | 25.0% |
| ! | TTTATGTATATATCAGCTGA+AGG | - | chr3_2:42462241-42462260 | Msa0406200:CDS | 25.0% |
| !! | AATACCATTCCTTGTATTTT+CGG | + | chr3_2:42462826-42462845 | None:intergenic | 25.0% |
| AAGTAAACCCAATTTCTTTG+AGG | + | chr3_2:42454440-42454459 | None:intergenic | 30.0% | |
| TCAAAGAAATTGGGTTTACT+TGG | - | chr3_2:42454439-42454458 | Msa0406200:CDS | 30.0% | |
| TATGTCTTCAACTCTAAGTA+TGG | + | chr3_2:42454467-42454486 | None:intergenic | 30.0% | |
| ! | AATTTGATGATCGATCTCTT+TGG | - | chr3_2:42454538-42454557 | Msa0406200:CDS | 30.0% |
| TGCTCTATTGTTTGTTCAAA+TGG | - | chr3_2:42454738-42454757 | Msa0406200:CDS | 30.0% | |
| TCTATTGTTTGTTCAAATGG+TGG | - | chr3_2:42454741-42454760 | Msa0406200:CDS | 30.0% | |
| ACCAATATGGTGACTTTATT+TGG | - | chr3_2:42454840-42454859 | Msa0406200:intron | 30.0% | |
| ! | CCAATATGGTGACTTTATTT+GGG | - | chr3_2:42454841-42454860 | Msa0406200:intron | 30.0% |
| ! | CAATATGGTGACTTTATTTG+GGG | - | chr3_2:42454842-42454861 | Msa0406200:intron | 30.0% |
| ! | AATATGGTGACTTTATTTGG+GGG | - | chr3_2:42454843-42454862 | Msa0406200:intron | 30.0% |
| TAACTATCATGAAAAAGCCA+TGG | - | chr3_2:42455058-42455077 | Msa0406200:intron | 30.0% | |
| ! | TGAATATGCTTCTGGAAAAT+TGG | + | chr3_2:42455578-42455597 | None:intergenic | 30.0% |
| TTAGGAATTGGAACTATTCA+TGG | + | chr3_2:42455673-42455692 | None:intergenic | 30.0% | |
| ACACATGACAAAGAAAAAAG+TGG | + | chr3_2:42455747-42455766 | None:intergenic | 30.0% | |
| !!! | ACTTTTTTCTTTGTCATGTG+TGG | - | chr3_2:42455746-42455765 | Msa0406200:intron | 30.0% |
| AAGAGAAAGATAATCTCACA+TGG | + | chr3_2:42455788-42455807 | None:intergenic | 30.0% | |
| ACAAACATGTTGCAATATCA+GGG | + | chr3_2:42455982-42456001 | None:intergenic | 30.0% | |
| TGCCGACATAAAAAATTTAC+CGG | - | chr3_2:42456034-42456053 | Msa0406200:intron | 30.0% | |
| GACCAATGTTAATAAGTTAG+TGG | - | chr3_2:42456133-42456152 | Msa0406200:intron | 30.0% | |
| GACCAATGTTAATAAGTTAG+TGG | - | chr3_2:42456133-42456152 | Msa0406200:intron | 30.0% | |
| TTTCACACTCAAACTATTTG+AGG | + | chr3_2:42456462-42456481 | None:intergenic | 30.0% | |
| AATGAGTATGATTGTACTTG+AGG | - | chr3_2:42456760-42456779 | Msa0406200:CDS | 30.0% | |
| !!! | TATTGTTGTTTTCCCTATAC+TGG | - | chr3_2:42456885-42456904 | Msa0406200:CDS | 30.0% |
| TCAAATGGAAATCTAAATGG+CGG | + | chr3_2:42456981-42457000 | None:intergenic | 30.0% | |
| CACTTATGTATCAAGTCAAA+TGG | + | chr3_2:42456996-42457015 | None:intergenic | 30.0% | |
| !!! | TCACATTTACCCAGTTTTTT+TGG | - | chr3_2:42457094-42457113 | Msa0406200:intron | 30.0% |
| TTACCTTCACCAAAAAAACT+GGG | + | chr3_2:42457106-42457125 | None:intergenic | 30.0% | |
| ! | ATACTGTATTCGTGCTTTTA+TGG | - | chr3_2:42457137-42457156 | Msa0406200:intron | 30.0% |
| ! | TACTGTATTCGTGCTTTTAT+GGG | - | chr3_2:42457138-42457157 | Msa0406200:intron | 30.0% |
| GTGTAACCTATGTAACAAAA+TGG | - | chr3_2:42457347-42457366 | Msa0406200:intron | 30.0% | |
| ! | CTCATTTTCAACAAATGGAT+AGG | - | chr3_2:42457411-42457430 | Msa0406200:CDS | 30.0% |
| TATAATATTAAGATCAGGGG+CGG | + | chr3_2:42457560-42457579 | None:intergenic | 30.0% | |
| !!! | CATTTTTTCAATTCAAACCC+GGG | + | chr3_2:42457669-42457688 | None:intergenic | 30.0% |
| AAAAAGCCCTGTTTAAATTC+GGG | + | chr3_2:42458024-42458043 | None:intergenic | 30.0% | |
| CAAAAAGCCCTGTTTAAATT+CGG | + | chr3_2:42458025-42458044 | None:intergenic | 30.0% | |
| !!! | ATGGCTTATTTTGTTGGATT+GGG | + | chr3_2:42458190-42458209 | None:intergenic | 30.0% |
| !!! | AATGGCTTATTTTGTTGGAT+TGG | + | chr3_2:42458191-42458210 | None:intergenic | 30.0% |
| !!! | CTAGAAATGGCTTATTTTGT+TGG | + | chr3_2:42458196-42458215 | None:intergenic | 30.0% |
| ATAATCCACTTGAGAACAAA+GGG | + | chr3_2:42458673-42458692 | None:intergenic | 30.0% | |
| ! | AGAAAACTGTTTTGTGAGTT+TGG | + | chr3_2:42459314-42459333 | None:intergenic | 30.0% |
| ! | AAAACAGTTTTCTGCAACTT+TGG | - | chr3_2:42459321-42459340 | Msa0406200:intron | 30.0% |
| ! | AGAAAACTGTTTTGTGAGTT+TGG | + | chr3_2:42459314-42459333 | None:intergenic | 30.0% |
| ! | AAAACAGTTTTCTGCAACTT+TGG | - | chr3_2:42459321-42459340 | Msa0406200:intron | 30.0% |
| CACAGATTTCAAGATATAAG+AGG | + | chr3_2:42459506-42459525 | None:intergenic | 30.0% | |
| !! | TAACTTTAGAACCTTTCACA+TGG | - | chr3_2:42459915-42459934 | Msa0406200:intron | 30.0% |
| AAGTTTATGATATGTGCTAC+TGG | - | chr3_2:42459994-42460013 | Msa0406200:intron | 30.0% | |
| ! | TTTTTGTTAACATGAATGGG+TGG | - | chr3_2:42460091-42460110 | Msa0406200:intron | 30.0% |
| ! | TTTTGTTAACATGAATGGGT+GGG | - | chr3_2:42460092-42460111 | Msa0406200:intron | 30.0% |
| TTGTCACTGATACAAATAGA+TGG | - | chr3_2:42460335-42460354 | Msa0406200:intron | 30.0% | |
| TGTCACTGATACAAATAGAT+GGG | - | chr3_2:42460336-42460355 | Msa0406200:intron | 30.0% | |
| ATGTGATCCAAGAAATAATG+AGG | - | chr3_2:42460440-42460459 | Msa0406200:intron | 30.0% | |
| ACTCTTACCTATGAACAAAT+AGG | - | chr3_2:42460561-42460580 | Msa0406200:intron | 30.0% | |
| CATCAAACCTATTTGTTCAT+AGG | + | chr3_2:42460571-42460590 | None:intergenic | 30.0% | |
| ATGAACAAATAGGTTTGATG+AGG | - | chr3_2:42460571-42460590 | Msa0406200:intron | 30.0% | |
| TCCACCAATAATATCAAAGT+TGG | - | chr3_2:42460616-42460635 | Msa0406200:intron | 30.0% | |
| TCCAACTTTGATATTATTGG+TGG | + | chr3_2:42460620-42460639 | None:intergenic | 30.0% | |
| CGATCCAACTTTGATATTAT+TGG | + | chr3_2:42460623-42460642 | None:intergenic | 30.0% | |
| ATAATATCAAAGTTGGATCG+TGG | - | chr3_2:42460623-42460642 | Msa0406200:intron | 30.0% | |
| ! | TGATGTTAACTCTGGATTTT+TGG | - | chr3_2:42460706-42460725 | Msa0406200:intron | 30.0% |
| ! | ATCAAAGTCGTTGATTACTT+GGG | - | chr3_2:42460868-42460887 | Msa0406200:intron | 30.0% |
| ! | AGGCAAACTATTTTATCCAT+GGG | + | chr3_2:42461099-42461118 | None:intergenic | 30.0% |
| ! | TAGGCAAACTATTTTATCCA+TGG | + | chr3_2:42461100-42461119 | None:intergenic | 30.0% |
| ! | ACAAAACCAAATACCTTTTG+GGG | + | chr3_2:42461145-42461164 | None:intergenic | 30.0% |
| GAGAAATTTCATCTGCTATA+CGG | + | chr3_2:42461250-42461269 | None:intergenic | 30.0% | |
| TATAGATGTATAGACAGTAC+TGG | - | chr3_2:42461437-42461456 | Msa0406200:intron | 30.0% | |
| TATCTTGCCTTGATTCAAAT+TGG | - | chr3_2:42461705-42461724 | Msa0406200:intron | 30.0% | |
| GATTACTCCAATTTGAATCA+AGG | + | chr3_2:42461715-42461734 | None:intergenic | 30.0% | |
| !! | CTTAAGCTTTAAGTAATAGC+AGG | + | chr3_2:42461805-42461824 | None:intergenic | 30.0% |
| !! | TGAAACAATTGATAGTGGTT+AGG | + | chr3_2:42461879-42461898 | None:intergenic | 30.0% |
| AAGCTTGAAACAATTGATAG+TGG | + | chr3_2:42461884-42461903 | None:intergenic | 30.0% | |
| ATTTCTATTCATGGTACAAG+AGG | - | chr3_2:42462020-42462039 | Msa0406200:intron | 30.0% | |
| GAATGGAACATAATAAGACT+CGG | + | chr3_2:42462097-42462116 | None:intergenic | 30.0% | |
| ! | CTCGCATAACTAATTAGTTT+CGG | + | chr3_2:42462119-42462138 | None:intergenic | 30.0% |
| TAAGAATGCATCAGTTATAC+GGG | + | chr3_2:42462187-42462206 | None:intergenic | 30.0% | |
| CATAAGGTTTGATTCTACAT+AGG | + | chr3_2:42462437-42462456 | None:intergenic | 30.0% | |
| ! | CTTTTATGGTCATATGCATA+AGG | + | chr3_2:42462453-42462472 | None:intergenic | 30.0% |
| ATAGGAGGAACACATTTATT+AGG | + | chr3_2:42462502-42462521 | None:intergenic | 30.0% | |
| TAGATCAGCAAGGATATATT+TGG | - | chr3_2:42462679-42462698 | Msa0406200:intron | 30.0% | |
| ATATATTTGGCAGTGTGATA+TGG | - | chr3_2:42462692-42462711 | Msa0406200:intron | 30.0% | |
| GTGTGATATGGTATTCATTA+TGG | - | chr3_2:42462704-42462723 | Msa0406200:intron | 30.0% | |
| !! | ACTATATTTTGAAGGATTGG+AGG | - | chr3_2:42462735-42462754 | Msa0406200:intron | 30.0% |
| GGAATGGTATTCTTCATATA+AGG | - | chr3_2:42462835-42462854 | Msa0406200:CDS | 30.0% | |
| !! | CTATGAACATTGCTGATTTA+AGG | - | chr3_2:42462898-42462917 | Msa0406200:CDS | 30.0% |
| ! | AGAAGGTATGTGTCTTCATT+AGG | + | chr3_2:42454406-42454425 | None:intergenic | 35.0% |
| ! | CACATACCTTCTTTTCATCA+AGG | - | chr3_2:42454414-42454433 | Msa0406200:CDS | 35.0% |
| ATCAAGGCCTCAAAGAAATT+GGG | - | chr3_2:42454430-42454449 | Msa0406200:CDS | 35.0% | |
| TATATCTGAAGGCTTGTCAT+TGG | + | chr3_2:42454512-42454531 | None:intergenic | 35.0% | |
| AACAAACGTGAATGAATCAG+GGG | + | chr3_2:42454719-42454738 | None:intergenic | 35.0% | |
| CAACAAACGTGAATGAATCA+GGG | + | chr3_2:42454720-42454739 | None:intergenic | 35.0% | |
| AAGGTTTCGAGCTATTCAAT+CGG | - | chr3_2:42454775-42454794 | Msa0406200:CDS | 35.0% | |
| !! | AATCGGATGCAAACTGATTT+TGG | - | chr3_2:42454792-42454811 | Msa0406200:CDS | 35.0% |
| TTGGTGTGATGTCTAACATT+AGG | + | chr3_2:42454825-42454844 | None:intergenic | 35.0% | |
| TGTTAGACATCACACCAATA+TGG | - | chr3_2:42454827-42454846 | Msa0406200:intron | 35.0% | |
| CCCAAATAAAGTCACCATAT+TGG | + | chr3_2:42454844-42454863 | None:intergenic | 35.0% | |
| ATGGCTGAAGAGATTGATAT+TGG | - | chr3_2:42454966-42454985 | Msa0406200:CDS | 35.0% | |
| GCAAACAGTAAATTGCCTAA+CGG | - | chr3_2:42454996-42455015 | Msa0406200:CDS | 35.0% | |
| GATTGCGCAATATATATTGC+AGG | - | chr3_2:42455033-42455052 | Msa0406200:CDS | 35.0% | |
| CAGAATCTTCGAAATTTCCA+TGG | + | chr3_2:42455078-42455097 | None:intergenic | 35.0% | |
| CATGGAAATTTCGAAGATTC+TGG | - | chr3_2:42455076-42455095 | Msa0406200:intron | 35.0% | |
| ! | TTCAACGGTCTCAAATCTTT+TGG | + | chr3_2:42455302-42455321 | None:intergenic | 35.0% |
| ! | AGATTTGAGACCGTTGAAAA+AGG | - | chr3_2:42455304-42455323 | Msa0406200:intron | 35.0% |
| !!! | TAATGCTCCACCTTTTTCAA+CGG | + | chr3_2:42455317-42455336 | None:intergenic | 35.0% |
| CAAACCACAATCACGTAATA+GGG | + | chr3_2:42455478-42455497 | None:intergenic | 35.0% | |
| TCAAACCACAATCACGTAAT+AGG | + | chr3_2:42455479-42455498 | None:intergenic | 35.0% | |
| GATATGTAGCACATTCACAT+TGG | - | chr3_2:42455497-42455516 | Msa0406200:intron | 35.0% | |
| ! | AATTCAACGCTTTAAGTCGT+AGG | + | chr3_2:42455830-42455849 | None:intergenic | 35.0% |
| !! | AAAGCGTTGAATTGCTGAAT+AGG | - | chr3_2:42455837-42455856 | Msa0406200:intron | 35.0% |
| !! | AAGCGTTGAATTGCTGAATA+GGG | - | chr3_2:42455838-42455857 | Msa0406200:intron | 35.0% |
| ATGACTGTACTTGGACAAAA+TGG | + | chr3_2:42455895-42455914 | None:intergenic | 35.0% | |
| CACAAACATGTTGCAATATC+AGG | + | chr3_2:42455983-42456002 | None:intergenic | 35.0% | |
| !! | TAGTGGATATGTTAGCTTGT+AGG | - | chr3_2:42456150-42456169 | Msa0406200:intron | 35.0% |
| TAGCTCAGATGGTGAATTAA+GGG | + | chr3_2:42456213-42456232 | None:intergenic | 35.0% | |
| !! | TAGTGGATATGTTAGCTTGT+AGG | - | chr3_2:42456150-42456169 | Msa0406200:intron | 35.0% |
| !! | AGGAGTTTTTAGGAGGTATA+GGG | + | chr3_2:42456331-42456350 | None:intergenic | 35.0% |
| TAGCTCAGATGGTGAATTAA+GGG | + | chr3_2:42456213-42456232 | None:intergenic | 35.0% | |
| AGCTACCTACACAGTAATTA+GGG | - | chr3_2:42456376-42456395 | Msa0406200:CDS | 35.0% | |
| TTTACAATCTGACCATCTGT+TGG | - | chr3_2:42456405-42456424 | Msa0406200:CDS | 35.0% | |
| TAGCTAACTATACCAACAGA+TGG | + | chr3_2:42456420-42456439 | None:intergenic | 35.0% | |
| ! | GACTCCCATATATTCGATTT+TGG | - | chr3_2:42456548-42456567 | Msa0406200:intron | 35.0% |
| GACGCCAAAATCGAATATAT+GGG | + | chr3_2:42456555-42456574 | None:intergenic | 35.0% | |
| AGACGCCAAAATCGAATATA+TGG | + | chr3_2:42456556-42456575 | None:intergenic | 35.0% | |
| !! | ATATATTCGATTTTGGCGTC+TGG | - | chr3_2:42456555-42456574 | Msa0406200:intron | 35.0% |
| CAGTAACATATGGCCAATTA+TGG | + | chr3_2:42456655-42456674 | None:intergenic | 35.0% | |
| !! | TTTTGGTGTGCTAAATCACT+TGG | - | chr3_2:42456693-42456712 | Msa0406200:intron | 35.0% |
| ! | TTTGGTGTGCTAAATCACTT+GGG | - | chr3_2:42456694-42456713 | Msa0406200:intron | 35.0% |
| TTGTGCAAGTCTTGCATAAA+AGG | - | chr3_2:42456737-42456756 | Msa0406200:CDS | 35.0% | |
| ! | GAGTCTCTAAAAAACATGTC+TGG | - | chr3_2:42456824-42456843 | Msa0406200:CDS | 35.0% |
| ! | CCTGTTCGTGAATTTTGTAT+TGG | + | chr3_2:42456943-42456962 | None:intergenic | 35.0% |
| CCAATACAAAATTCACGAAC+AGG | - | chr3_2:42456940-42456959 | Msa0406200:intron | 35.0% | |
| !!! | TTACCCAGTTTTTTTGGTGA+AGG | - | chr3_2:42457100-42457119 | Msa0406200:intron | 35.0% |
| CTTACCTTCACCAAAAAAAC+TGG | + | chr3_2:42457107-42457126 | None:intergenic | 35.0% | |
| AAAGTCTACAAAATCCACCA+TGG | - | chr3_2:42457165-42457184 | Msa0406200:intron | 35.0% | |
| ACACATACAACACACACATA+CGG | - | chr3_2:42457275-42457294 | Msa0406200:intron | 35.0% | |
| ! | TCTCACCCATTTTGTTACAT+AGG | + | chr3_2:42457356-42457375 | None:intergenic | 35.0% |
| ATCCAGACTTTAGGTATATG+TGG | + | chr3_2:42457537-42457556 | None:intergenic | 35.0% | |
| TTAACCAGCAATTCTTATGG+AGG | - | chr3_2:42457638-42457657 | Msa0406200:intron | 35.0% | |
| TAACCAGCAATTCTTATGGA+GGG | - | chr3_2:42457639-42457658 | Msa0406200:intron | 35.0% | |
| AATTGTGCACACGTTTCTTA+TGG | - | chr3_2:42457891-42457910 | Msa0406200:intron | 35.0% | |
| TGCAAGTAGAGCTGTAAAAA+CGG | - | chr3_2:42457933-42457952 | Msa0406200:intron | 35.0% | |
| ! | AAATTCGGGCTGCAATTTTA+AGG | + | chr3_2:42458010-42458029 | None:intergenic | 35.0% |
| ! | CGAATTTAAACAGGGCTTTT+TGG | - | chr3_2:42458023-42458042 | Msa0406200:intron | 35.0% |
| TACAAATTGAAGCTGCTGTT+TGG | - | chr3_2:42458126-42458145 | Msa0406200:intron | 35.0% | |
| ! | ACAAATTGAAGCTGCTGTTT+GGG | - | chr3_2:42458127-42458146 | Msa0406200:intron | 35.0% |
| !! | ACTGGTTTCTTTTGTTGGAT+GGG | + | chr3_2:42458226-42458245 | None:intergenic | 35.0% |
| !! | AACTGGTTTCTTTTGTTGGA+TGG | + | chr3_2:42458227-42458246 | None:intergenic | 35.0% |
| CATAATCCACTTGAGAACAA+AGG | + | chr3_2:42458674-42458693 | None:intergenic | 35.0% | |
| AAAAAGCCCTGTTGAAAAAC+GGG | + | chr3_2:42458792-42458811 | None:intergenic | 35.0% | |
| CAAAAAGCCCTGTTGAAAAA+CGG | + | chr3_2:42458793-42458812 | None:intergenic | 35.0% | |
| ATAGCAAACATTATGCCAAG+TGG | + | chr3_2:42458905-42458924 | None:intergenic | 35.0% | |
| GAACTTTACTATGTGTGTCA+AGG | - | chr3_2:42459082-42459101 | Msa0406200:intron | 35.0% | |
| !! | TTTCTGCAACTTTGGTGTTT+AGG | - | chr3_2:42459329-42459348 | Msa0406200:intron | 35.0% |
| !! | TTTCTGCAACTTTGGTGTTT+AGG | - | chr3_2:42459329-42459348 | Msa0406200:intron | 35.0% |
| !! | CCACTTAGTGTTTCTGATTT+TGG | + | chr3_2:42459532-42459551 | None:intergenic | 35.0% |
| CCAAAATCAGAAACACTAAG+TGG | - | chr3_2:42459529-42459548 | Msa0406200:intron | 35.0% | |
| AATAGAAGTTGTTGAGCACA+TGG | + | chr3_2:42459618-42459637 | None:intergenic | 35.0% | |
| AATCCAAAATGAGAAACACG+AGG | - | chr3_2:42459762-42459781 | Msa0406200:intron | 35.0% | |
| ! | ATACCTCGTGTTTCTCATTT+TGG | + | chr3_2:42459768-42459787 | None:intergenic | 35.0% |
| AAACTAACGGCAACAATAGA+CGG | + | chr3_2:42459805-42459824 | None:intergenic | 35.0% | |
| TGTTTGGTTGACATCATGTT+TGG | - | chr3_2:42460191-42460210 | Msa0406200:intron | 35.0% | |
| TCCAAGAAATAATGAGGTAG+AGG | - | chr3_2:42460446-42460465 | Msa0406200:intron | 35.0% | |
| ! | ACCTCTACCTCATTATTTCT+TGG | + | chr3_2:42460450-42460469 | None:intergenic | 35.0% |
| GAAATAATGAGGTAGAGGTT+CGG | - | chr3_2:42460451-42460470 | Msa0406200:intron | 35.0% | |
| AAATAATGAGGTAGAGGTTC+GGG | - | chr3_2:42460452-42460471 | Msa0406200:intron | 35.0% | |
| AAGTATTCTTCAAGAATGGG+TGG | - | chr3_2:42460493-42460512 | Msa0406200:intron | 35.0% | |
| ! | ACAACATTGATATTGGTGCT+TGG | - | chr3_2:42460535-42460554 | Msa0406200:intron | 35.0% |
| ! | CAACATTGATATTGGTGCTT+GGG | - | chr3_2:42460536-42460555 | Msa0406200:intron | 35.0% |
| TTGATCTCAGTTTCCTTAGT+TGG | + | chr3_2:42460853-42460872 | None:intergenic | 35.0% | |
| ! | GATCAAAGTCGTTGATTACT+TGG | - | chr3_2:42460867-42460886 | Msa0406200:intron | 35.0% |
| ! | TTGATTACTTGGGATTTGCT+TGG | - | chr3_2:42460878-42460897 | Msa0406200:intron | 35.0% |
| ! | AAAACCAAATACCTTTTGGG+GGG | + | chr3_2:42461143-42461162 | None:intergenic | 35.0% |
| ! | CAAAACCAAATACCTTTTGG+GGG | + | chr3_2:42461144-42461163 | None:intergenic | 35.0% |
| ACAACACACAAAAGAATGAC+AGG | + | chr3_2:42461170-42461189 | None:intergenic | 35.0% | |
| AAAGTTGAATACCTACTACG+TGG | - | chr3_2:42461283-42461302 | Msa0406200:intron | 35.0% | |
| ACTGATATCTAATGAGCAGA+AGG | - | chr3_2:42461663-42461682 | Msa0406200:intron | 35.0% | |
| ATAAAAACTAATGTGCGGAG+TGG | - | chr3_2:42461766-42461785 | Msa0406200:intron | 35.0% | |
| !! | CAATTGATAGTGGTTAGGAT+AGG | + | chr3_2:42461874-42461893 | None:intergenic | 35.0% |
| TTAGTTAATCGTCAAGCAAC+AGG | + | chr3_2:42461914-42461933 | None:intergenic | 35.0% | |
| !!! | TCATCAGAACTGCCTTATTT+TGG | - | chr3_2:42461934-42461953 | Msa0406200:intron | 35.0% |
| GCAGCCTTAATTTCTATTCA+TGG | - | chr3_2:42462011-42462030 | Msa0406200:intron | 35.0% | |
| AGCATATGTCATTCTTCTGT+TGG | + | chr3_2:42462065-42462084 | None:intergenic | 35.0% | |
| CGAAACTAATTAGTTATGCG+AGG | - | chr3_2:42462117-42462136 | Msa0406200:intron | 35.0% | |
| TATTCCTTAGCAAAACACGA+CGG | + | chr3_2:42462275-42462294 | None:intergenic | 35.0% | |
| ! | TCGTGTTTTGCTAAGGAATA+TGG | - | chr3_2:42462275-42462294 | Msa0406200:CDS | 35.0% |
| GTTAAGGTCCACAAGAAAAA+TGG | - | chr3_2:42462353-42462372 | Msa0406200:CDS | 35.0% | |
| ATGACCATAAAAGACAGATC+AGG | - | chr3_2:42462460-42462479 | Msa0406200:intron | 35.0% | |
| GTGATCATCTTTGATATAGG+AGG | + | chr3_2:42462517-42462536 | None:intergenic | 35.0% | |
| GGAGTGATCATCTTTGATAT+AGG | + | chr3_2:42462520-42462539 | None:intergenic | 35.0% | |
| AAGATGATCACTCCAAATGA+TGG | - | chr3_2:42462526-42462545 | Msa0406200:intron | 35.0% | |
| GATAGCTGAATCACATTTGT+GGG | + | chr3_2:42462654-42462673 | None:intergenic | 35.0% | |
| AGATAGCTGAATCACATTTG+TGG | + | chr3_2:42462655-42462674 | None:intergenic | 35.0% | |
| CTATCTATCATAGATCAGCA+AGG | - | chr3_2:42462669-42462688 | Msa0406200:intron | 35.0% | |
| TTGAGGCCTTGATGAAAAGA+AGG | + | chr3_2:42454423-42454442 | None:intergenic | 40.0% | |
| CATCAAGGCCTCAAAGAAAT+TGG | - | chr3_2:42454429-42454448 | Msa0406200:CDS | 40.0% | |
| ! | GATGATCGATCTCTTTGGAA+AGG | - | chr3_2:42454543-42454562 | Msa0406200:CDS | 40.0% |
| GCAACAAACGTGAATGAATC+AGG | + | chr3_2:42454721-42454740 | None:intergenic | 40.0% | |
| !! | AATGGTGGATGCTTCTTTGA+AGG | - | chr3_2:42454756-42454775 | Msa0406200:CDS | 40.0% |
| AGTAAATTGCCTAACGGTGA+GGG | - | chr3_2:42455002-42455021 | Msa0406200:CDS | 40.0% | |
| ! | GCTCTATAGTTTGTGAAGTC+TGG | + | chr3_2:42455107-42455126 | None:intergenic | 40.0% |
| GACTTCACAAACTATAGAGC+TGG | - | chr3_2:42455107-42455126 | Msa0406200:intron | 40.0% | |
| CTATAGAGCTGGAATTAGTG+TGG | - | chr3_2:42455118-42455137 | Msa0406200:intron | 40.0% | |
| ! | TTTGAGACCGTTGAAAAAGG+TGG | - | chr3_2:42455307-42455326 | Msa0406200:intron | 40.0% |
| CGTTGACAAAATATAGTGGC+TGG | + | chr3_2:42455454-42455473 | None:intergenic | 40.0% | |
| GGGTCGTTGACAAAATATAG+TGG | + | chr3_2:42455458-42455477 | None:intergenic | 40.0% | |
| !! | CACATTGGTTTACCTGATTG+TGG | - | chr3_2:42455512-42455531 | Msa0406200:intron | 40.0% |
| GGTGTACTTGAGATGTAGAA+TGG | + | chr3_2:42455557-42455576 | None:intergenic | 40.0% | |
| TACTTGGACAAAATGGAAGG+TGG | + | chr3_2:42455888-42455907 | None:intergenic | 40.0% | |
| CTGTACTTGGACAAAATGGA+AGG | + | chr3_2:42455891-42455910 | None:intergenic | 40.0% | |
| ! | AAGGGTTTGATGACTGTACT+TGG | + | chr3_2:42455904-42455923 | None:intergenic | 40.0% |
| CAAACCCTTCAGTTCCTTAT+TGG | - | chr3_2:42455915-42455934 | Msa0406200:intron | 40.0% | |
| !! | AGGAGTTTTCAGGAGGTATA+GGG | + | chr3_2:42456183-42456202 | None:intergenic | 40.0% |
| GTAGCTCAGATGGTGAATTA+AGG | + | chr3_2:42456214-42456233 | None:intergenic | 40.0% | |
| !! | GAGGAGTTTTTAGGAGGTAT+AGG | + | chr3_2:42456332-42456351 | None:intergenic | 40.0% |
| ATACCTCCTAAAAACTCCTC+TGG | - | chr3_2:42456332-42456351 | Msa0406200:CDS | 40.0% | |
| GTAGCTCAGATGGTGAATTA+AGG | + | chr3_2:42456214-42456233 | None:intergenic | 40.0% | |
| GAGCTACCTACACAGTAATT+AGG | - | chr3_2:42456375-42456394 | Msa0406200:CDS | 40.0% | |
| GCTACCTACACAGTAATTAG+GGG | - | chr3_2:42456377-42456396 | Msa0406200:CDS | 40.0% | |
| CTAACCCCTAATTACTGTGT+AGG | + | chr3_2:42456384-42456403 | None:intergenic | 40.0% | |
| AAAATAGTTCAGTGTGCTGC+TGG | - | chr3_2:42456628-42456647 | Msa0406200:intron | 40.0% | |
| CAAAACATTCATCCATGCAG+AGG | + | chr3_2:42456678-42456697 | None:intergenic | 40.0% | |
| ! | CTCTGCATGGATGAATGTTT+TGG | - | chr3_2:42456676-42456695 | Msa0406200:intron | 40.0% |
| TTGGTGTGCTAAATCACTTG+GGG | - | chr3_2:42456695-42456714 | Msa0406200:intron | 40.0% | |
| ATCCACCATGGATCTTAATC+AGG | - | chr3_2:42457177-42457196 | Msa0406200:intron | 40.0% | |
| TCCACCATGGATCTTAATCA+GGG | - | chr3_2:42457178-42457197 | Msa0406200:intron | 40.0% | |
| CTCCACATATACCTAAAGTC+TGG | - | chr3_2:42457532-42457551 | Msa0406200:intron | 40.0% | |
| ! | AATTGGGAAGAGCTTGCTTA+GGG | + | chr3_2:42457619-42457638 | None:intergenic | 40.0% |
| ! | AAATTGGGAAGAGCTTGCTT+AGG | + | chr3_2:42457620-42457639 | None:intergenic | 40.0% |
| TTTCCCTCCATAAGAATTGC+TGG | + | chr3_2:42457645-42457664 | None:intergenic | 40.0% | |
| ATTCTTATGGAGGGAAAACC+CGG | - | chr3_2:42457648-42457667 | Msa0406200:intron | 40.0% | |
| TTGCTTGAAGGAAATCTGCA+TGG | - | chr3_2:42457741-42457760 | Msa0406200:intron | 40.0% | |
| AATTGTGCACACGTTTCCTA+TGG | - | chr3_2:42457766-42457785 | Msa0406200:intron | 40.0% | |
| ATACCATACATTGTGCCAAG+TGG | + | chr3_2:42457824-42457843 | None:intergenic | 40.0% | |
| AATGATGCTTGCTTGCTTGA+AGG | - | chr3_2:42457854-42457873 | Msa0406200:intron | 40.0% | |
| TTGCTTGAAGGAAATCTGCA+TGG | - | chr3_2:42457741-42457760 | Msa0406200:intron | 40.0% | |
| TGCACACGTTTCTTATGGTT+GGG | - | chr3_2:42457896-42457915 | Msa0406200:intron | 40.0% | |
| TCTTATGGTTGGGGTAATGA+TGG | - | chr3_2:42457906-42457925 | Msa0406200:intron | 40.0% | |
| GCAAGTAGAGCTGTAAAAAC+GGG | - | chr3_2:42457934-42457953 | Msa0406200:intron | 40.0% | |
| TAAAAACGGGATTGCTCGTA+TGG | - | chr3_2:42457947-42457966 | Msa0406200:intron | 40.0% | |
| AAAAACGGGATTGCTCGTAT+GGG | - | chr3_2:42457948-42457967 | Msa0406200:intron | 40.0% | |
| !! | TTCGTTTTATTCGGGCTTTC+GGG | + | chr3_2:42457978-42457997 | None:intergenic | 40.0% |
| !! | CTTCGTTTTATTCGGGCTTT+CGG | + | chr3_2:42457979-42457998 | None:intergenic | 40.0% |
| GAAAGCCCGAATAAAACGAA+GGG | - | chr3_2:42457978-42457997 | Msa0406200:intron | 40.0% | |
| ATTGCAGCCCGAATTTAAAC+AGG | - | chr3_2:42458014-42458033 | Msa0406200:intron | 40.0% | |
| TTGCAGCCCGAATTTAAACA+GGG | - | chr3_2:42458015-42458034 | Msa0406200:intron | 40.0% | |
| !!! | GTAATTTTAATTACGCGGGC+TGG | + | chr3_2:42458109-42458128 | None:intergenic | 40.0% |
| !! | GTGGCCTAATTTCACTTTTC+TGG | - | chr3_2:42458164-42458183 | Msa0406200:intron | 40.0% |
| TGGGCCAGAAAAGTGAAATT+AGG | + | chr3_2:42458171-42458190 | None:intergenic | 40.0% | |
| GATGGGTAGAAAGCTAGAAA+TGG | + | chr3_2:42458209-42458228 | None:intergenic | 40.0% | |
| !! | CGTGAACTGGTTTCTTTTGT+TGG | + | chr3_2:42458231-42458250 | None:intergenic | 40.0% |
| ! | TATGGTTTGCGAAGTTTCCA+TGG | + | chr3_2:42458281-42458300 | None:intergenic | 40.0% |
| ! | CTGCGCAGCTGAAATTTTTA+TGG | + | chr3_2:42458299-42458318 | None:intergenic | 40.0% |
| ATGACAGAAAACGAGACGAA+CGG | + | chr3_2:42458334-42458353 | None:intergenic | 40.0% | |
| AAAAAAAAGGTAAGACGGGC+CGG | - | chr3_2:42458714-42458733 | Msa0406200:intron | 40.0% | |
| !! | ATTCAAGCCCGTTTTTCAAC+AGG | - | chr3_2:42458782-42458801 | Msa0406200:intron | 40.0% |
| !! | TTCAAGCCCGTTTTTCAACA+GGG | - | chr3_2:42458783-42458802 | Msa0406200:intron | 40.0% |
| !! | CGTTTTTCAACAGGGCTTTT+TGG | - | chr3_2:42458791-42458810 | Msa0406200:intron | 40.0% |
| TGCAACTAGAGCTGTCAAAT+CGG | + | chr3_2:42458873-42458892 | None:intergenic | 40.0% | |
| CAAACATTATGCCAAGTGGA+TGG | + | chr3_2:42458901-42458920 | None:intergenic | 40.0% | |
| TGTGGTTGATTGATGTCTTG+TGG | + | chr3_2:42459023-42459042 | None:intergenic | 40.0% | |
| CTGGTAGAAAACACGAAATG+TGG | + | chr3_2:42459041-42459060 | None:intergenic | 40.0% | |
| ! | AAAGTGTTCATTCTTGGCTC+TGG | + | chr3_2:42459060-42459079 | None:intergenic | 40.0% |
| AGAGCCAAGAATGAACACTT+TGG | - | chr3_2:42459059-42459078 | Msa0406200:intron | 40.0% | |
| GAGCCAAGAATGAACACTTT+GGG | - | chr3_2:42459060-42459079 | Msa0406200:intron | 40.0% | |
| ! | GTTCCCAAAGTGTTCATTCT+TGG | + | chr3_2:42459066-42459085 | None:intergenic | 40.0% |
| GGTGCGATATGTTTGATGAA+AGG | - | chr3_2:42459119-42459138 | Msa0406200:intron | 40.0% | |
| CATAACACAGTTGCAGAAAG+AGG | + | chr3_2:42459238-42459257 | None:intergenic | 40.0% | |
| TCAACAGTTCAAGGCAATAC+TGG | - | chr3_2:42459856-42459875 | Msa0406200:intron | 40.0% | |
| TATGTCGTACTCCATGTGAA+AGG | + | chr3_2:42459929-42459948 | None:intergenic | 40.0% | |
| CAAATAGGGGCTGTTAGTAA+TGG | + | chr3_2:42460279-42460298 | None:intergenic | 40.0% | |
| TCAGTGACAAAGTAAGTAGC+AGG | + | chr3_2:42460325-42460344 | None:intergenic | 40.0% | |
| !!! | TTTGGTTTTGGAAAGGAGTG+TGG | - | chr3_2:42460390-42460409 | Msa0406200:intron | 40.0% |
| TTCTTCAAGAATGGGTGGTT+TGG | - | chr3_2:42460498-42460517 | Msa0406200:intron | 40.0% | |
| ACTGCATCTGATGTTAACTC+TGG | - | chr3_2:42460698-42460717 | Msa0406200:intron | 40.0% | |
| GTTTGTTTATTTGCCACTGC+AGG | - | chr3_2:42460791-42460810 | Msa0406200:intron | 40.0% | |
| CAAAATCCTAACCAAGGCAA+AGG | + | chr3_2:42460817-42460836 | None:intergenic | 40.0% | |
| CTCTGACAAAATCCTAACCA+AGG | + | chr3_2:42460823-42460842 | None:intergenic | 40.0% | |
| !! | TTGCTTGGAAGTGCTCATTT+CGG | - | chr3_2:42460893-42460912 | Msa0406200:intron | 40.0% |
| TGTCGAGGCAGAAAATGAAT+TGG | - | chr3_2:42460918-42460937 | Msa0406200:intron | 40.0% | |
| ! | GAATTGGTGTTCAAAATCGG+AGG | - | chr3_2:42460934-42460953 | Msa0406200:intron | 40.0% |
| AGAACAAAGTTGTCTACCTG+AGG | - | chr3_2:42461034-42461053 | Msa0406200:intron | 40.0% | |
| ATTATGTCCTTGTGCTTGCA+GGG | + | chr3_2:42461072-42461091 | None:intergenic | 40.0% | |
| ATTCGTATTGTCATCGTCTC+AGG | - | chr3_2:42461215-42461234 | Msa0406200:intron | 40.0% | |
| TATTGTCATCGTCTCAGGAA+CGG | - | chr3_2:42461220-42461239 | Msa0406200:intron | 40.0% | |
| ! | ACAGTACTGGACACACTAAA+TGG | - | chr3_2:42461450-42461469 | Msa0406200:intron | 40.0% |
| CAAGATACACAAAGTCGACT+CGG | - | chr3_2:42461541-42461560 | Msa0406200:intron | 40.0% | |
| TCATGGTACAAGAGGCAATT+AGG | - | chr3_2:42462028-42462047 | Msa0406200:intron | 40.0% | |
| TCCTAACAAGAACATGTTCG+AGG | - | chr3_2:42462331-42462350 | Msa0406200:CDS | 40.0% | |
| ACCTCGAACATGTTCTTGTT+AGG | + | chr3_2:42462335-42462354 | None:intergenic | 40.0% | |
| CAAGAACATGTTCGAGGTTA+AGG | - | chr3_2:42462337-42462356 | Msa0406200:CDS | 40.0% | |
| !!! | ACACCTTGCCATTTTTCTTG+TGG | + | chr3_2:42462364-42462383 | None:intergenic | 40.0% |
| AAAATGGCAAGGTGTACTTC+AGG | - | chr3_2:42462369-42462388 | Msa0406200:CDS | 40.0% | |
| AAATGGCAAGGTGTACTTCA+GGG | - | chr3_2:42462370-42462389 | Msa0406200:CDS | 40.0% | |
| !! | TTTAATTGGCCTTGGTGCAT+GGG | - | chr3_2:42462402-42462421 | Msa0406200:CDS | 40.0% |
| ! | CACTCCTGATCTGTCTTTTA+TGG | + | chr3_2:42462467-42462486 | None:intergenic | 40.0% |
| CATAAAAGACAGATCAGGAG+TGG | - | chr3_2:42462465-42462484 | Msa0406200:intron | 40.0% | |
| TTGCTGTCACCGAAAATACA+AGG | - | chr3_2:42462814-42462833 | Msa0406200:CDS | 40.0% | |
| GTCACCGAAAATACAAGGAA+TGG | - | chr3_2:42462819-42462838 | Msa0406200:CDS | 40.0% | |
| CCTTTATGAATGCACTGCAA+AGG | + | chr3_2:42462867-42462886 | None:intergenic | 40.0% | |
| CCTTTGCAGTGCATTCATAA+AGG | - | chr3_2:42462864-42462883 | Msa0406200:CDS | 40.0% | |
| ! | TGATTTAAGGCATGTGTACC+AGG | - | chr3_2:42462911-42462930 | Msa0406200:CDS | 40.0% |
| !! | CTGACTGCTTTTGCACACAA+CGG | - | chr3_2:42454640-42454659 | Msa0406200:intron | 45.0% |
| ! | GTTGCTTTCGTGTGTTGACA+TGG | - | chr3_2:42454947-42454966 | Msa0406200:CDS | 45.0% |
| CAGTAAATTGCCTAACGGTG+AGG | - | chr3_2:42455001-42455020 | Msa0406200:CDS | 45.0% | |
| ACGACCCTATTACGTGATTG+TGG | - | chr3_2:42455471-42455490 | Msa0406200:intron | 45.0% | |
| ! | GCTTTAAGTCGTAGGAGCAA+TGG | + | chr3_2:42455822-42455841 | None:intergenic | 45.0% |
| TGCTGAATAGGGTGTGTGAT+TGG | - | chr3_2:42455849-42455868 | Msa0406200:intron | 45.0% | |
| GAGGCCAATAAGGAACTGAA+GGG | + | chr3_2:42455922-42455941 | None:intergenic | 45.0% | |
| GAAAAGGGAGGTTAGAAGAG+GGG | + | chr3_2:42455953-42455972 | None:intergenic | 45.0% | |
| CGAAAAGGGAGGTTAGAAGA+GGG | + | chr3_2:42455954-42455973 | None:intergenic | 45.0% | |
| ! | CCTCTTCTAACCTCCCTTTT+CGG | - | chr3_2:42455952-42455971 | Msa0406200:intron | 45.0% |
| ! | CTCTTCTAACCTCCCTTTTC+GGG | - | chr3_2:42455953-42455972 | Msa0406200:intron | 45.0% |
| ATATCAGGGACTCCCGAAAA+GGG | + | chr3_2:42455968-42455987 | None:intergenic | 45.0% | |
| AATATCAGGGACTCCCGAAA+AGG | + | chr3_2:42455969-42455988 | None:intergenic | 45.0% | |
| TTATGTCGGCACTCACATGA+GGG | + | chr3_2:42456025-42456044 | None:intergenic | 45.0% | |
| TTTATGTCGGCACTCACATG+AGG | + | chr3_2:42456026-42456045 | None:intergenic | 45.0% | |
| TAGCATAAGTCGCTGAGACT+TGG | - | chr3_2:42456057-42456076 | Msa0406200:intron | 45.0% | |
| !! | GAGGAGTTTTCAGGAGGTAT+AGG | + | chr3_2:42456184-42456203 | None:intergenic | 45.0% |
| ATACCTCCTGAAAACTCCTC+TGG | - | chr3_2:42456184-42456203 | Msa0406200:CDS | 45.0% | |
| !! | ACACCAGAGGAGTTTTTAGG+AGG | + | chr3_2:42456338-42456357 | None:intergenic | 45.0% |
| TACTGTGTAGGTAGCTCAGA+TGG | + | chr3_2:42456372-42456391 | None:intergenic | 45.0% | |
| CACATCAGAGATGACACAAG+AGG | + | chr3_2:42456504-42456523 | None:intergenic | 45.0% | |
| !! | TATTCGATTTTGGCGTCTGG+TGG | - | chr3_2:42456558-42456577 | Msa0406200:intron | 45.0% |
| !! | ATTCGATTTTGGCGTCTGGT+GGG | - | chr3_2:42456559-42456578 | Msa0406200:intron | 45.0% |
| CATGCAGAGGCAGTAACATA+TGG | + | chr3_2:42456665-42456684 | None:intergenic | 45.0% | |
| CATATGTTACTGCCTCTGCA+TGG | - | chr3_2:42456663-42456682 | Msa0406200:intron | 45.0% | |
| CCACCATGGATCTTAATCAG+GGG | - | chr3_2:42457179-42457198 | Msa0406200:intron | 45.0% | |
| GATCCATGTTGGAGCTATGT+GGG | - | chr3_2:42457204-42457223 | Msa0406200:intron | 45.0% | |
| ! | AATAAGGGGGGAAAAGCATG+TGG | + | chr3_2:42457239-42457258 | None:intergenic | 45.0% |
| ! | GAAGAATTTGCTTGCAGCAC+TGG | + | chr3_2:42457591-42457610 | None:intergenic | 45.0% |
| TTCTTATGGAGGGAAAACCC+GGG | - | chr3_2:42457649-42457668 | Msa0406200:intron | 45.0% | |
| GCCATAGCACATGATCTGAA+GGG | + | chr3_2:42457701-42457720 | None:intergenic | 45.0% | |
| AGATCATGTGCTATGGCCTT+GGG | - | chr3_2:42457704-42457723 | Msa0406200:intron | 45.0% | |
| ! | TCAGGTTGCTTCTTGCTTGA+AGG | - | chr3_2:42457729-42457748 | Msa0406200:intron | 45.0% |
| TGCACACGTTTCCTATGGTT+GGG | - | chr3_2:42457771-42457790 | Msa0406200:intron | 45.0% | |
| TCCTATGGTTGGGGTAATGA+TGG | - | chr3_2:42457781-42457800 | Msa0406200:intron | 45.0% | |
| ACCATCATTACCCCAACCAT+AGG | + | chr3_2:42457785-42457804 | None:intergenic | 45.0% | |
| GCTGCAAATAACCATCCACT+TGG | - | chr3_2:42457806-42457825 | Msa0406200:intron | 45.0% | |
| CATACATTGTGCCAAGTGGA+TGG | + | chr3_2:42457820-42457839 | None:intergenic | 45.0% | |
| CATCCACTTGGCACAATGTA+TGG | - | chr3_2:42457818-42457837 | Msa0406200:intron | 45.0% | |
| GTGCACACGTTTCTTATGGT+TGG | - | chr3_2:42457895-42457914 | Msa0406200:intron | 45.0% | |
| GCACACGTTTCTTATGGTTG+GGG | - | chr3_2:42457897-42457916 | Msa0406200:intron | 45.0% | |
| CGAAAGCCCGAATAAAACGA+AGG | - | chr3_2:42457977-42457996 | Msa0406200:intron | 45.0% | |
| !! | CCAAGCCCTTCGTTTTATTC+GGG | + | chr3_2:42457986-42458005 | None:intergenic | 45.0% |
| !! | CCCAAGCCCTTCGTTTTATT+CGG | + | chr3_2:42457987-42458006 | None:intergenic | 45.0% |
| CCGAATAAAACGAAGGGCTT+GGG | - | chr3_2:42457984-42458003 | Msa0406200:intron | 45.0% | |
| !! | TTAAACAGGGCTTTTTGGCC+CGG | - | chr3_2:42458028-42458047 | Msa0406200:intron | 45.0% |
| !!! | ATTTTAATTACGCGGGCTGG+CGG | + | chr3_2:42458106-42458125 | None:intergenic | 45.0% |
| TGGTGAGAGAGTGAACCTAA+GGG | + | chr3_2:42458261-42458280 | None:intergenic | 45.0% | |
| ATGGTGAGAGAGTGAACCTA+AGG | + | chr3_2:42458262-42458281 | None:intergenic | 45.0% | |
| TTAGGTTCACTCTCTCACCA+TGG | - | chr3_2:42458261-42458280 | Msa0406200:intron | 45.0% | |
| TTCTGCCCTTTGTTCTCAAG+TGG | - | chr3_2:42458665-42458684 | Msa0406200:intron | 45.0% | |
| GCAACTAGAGCTGTCAAATC+GGG | + | chr3_2:42458872-42458891 | None:intergenic | 45.0% | |
| GTTGCAAGTAACCATCCACT+TGG | - | chr3_2:42458887-42458906 | Msa0406200:intron | 45.0% | |
| CCTTGAACTGTTGACATGAG+AGG | + | chr3_2:42459850-42459869 | None:intergenic | 45.0% | |
| CCTCTCATGTCAACAGTTCA+AGG | - | chr3_2:42459847-42459866 | Msa0406200:intron | 45.0% | |
| ACAGTTCAAGGCAATACTGG+TGG | - | chr3_2:42459859-42459878 | Msa0406200:intron | 45.0% | |
| CAGTTCAAGGCAATACTGGT+GGG | - | chr3_2:42459860-42459879 | Msa0406200:intron | 45.0% | |
| AGTTCAAGGCAATACTGGTG+GGG | - | chr3_2:42459861-42459880 | Msa0406200:intron | 45.0% | |
| TTATTGGTGGAGTGCGATCA+GGG | + | chr3_2:42460607-42460626 | None:intergenic | 45.0% | |
| ATTATTGGTGGAGTGCGATC+AGG | + | chr3_2:42460608-42460627 | None:intergenic | 45.0% | |
| TCAGAGTGCATTGCCAACTA+AGG | - | chr3_2:42460837-42460856 | Msa0406200:intron | 45.0% | |
| ! | TTGGTGTTCAAAATCGGAGG+TGG | - | chr3_2:42460937-42460956 | Msa0406200:intron | 45.0% |
| TGGTGTTCAAAATCGGAGGT+GGG | - | chr3_2:42460938-42460957 | Msa0406200:intron | 45.0% | |
| !! | TTACAGCTAGCTTTAGGGGA+TGG | + | chr3_2:42461002-42461021 | None:intergenic | 45.0% |
| !! | TGCGTTACAGCTAGCTTTAG+GGG | + | chr3_2:42461006-42461025 | None:intergenic | 45.0% |
| !! | GTGCGTTACAGCTAGCTTTA+GGG | + | chr3_2:42461007-42461026 | None:intergenic | 45.0% |
| GATTATGTCCTTGTGCTTGC+AGG | + | chr3_2:42461073-42461092 | None:intergenic | 45.0% | |
| CAAGGACATAATCAAGCCCA+TGG | - | chr3_2:42461080-42461099 | Msa0406200:intron | 45.0% | |
| TTTCTTCGCAAGTGTCAACC+AGG | - | chr3_2:42461402-42461421 | Msa0406200:intron | 45.0% | |
| TTCTTCGCAAGTGTCAACCA+GGG | - | chr3_2:42461403-42461422 | Msa0406200:intron | 45.0% | |
| ! | ATTGCCGTCGTGTTTTGCTA+AGG | - | chr3_2:42462268-42462287 | Msa0406200:CDS | 45.0% |
| GGTCCACAAGAAAAATGGCA+AGG | - | chr3_2:42462358-42462377 | Msa0406200:CDS | 45.0% | |
| CAGGGAGGATAGGGTTTAAT+TGG | - | chr3_2:42462388-42462407 | Msa0406200:CDS | 45.0% | |
| ! | GGATAGGGTTTAATTGGCCT+TGG | - | chr3_2:42462394-42462413 | Msa0406200:CDS | 45.0% |
| !! | GTTTAATTGGCCTTGGTGCA+TGG | - | chr3_2:42462401-42462420 | Msa0406200:CDS | 45.0% |
| !! | ACATCTTCTGACATCGACTC+TGG | - | chr3_2:42462592-42462611 | Msa0406200:CDS | 45.0% |
| !! | TGACATCGACTCTGGATATC+TGG | - | chr3_2:42462600-42462619 | Msa0406200:CDS | 45.0% |
| TGGTAAATGCAGTTTCTGCG+AGG | - | chr3_2:42462620-42462639 | Msa0406200:intron | 45.0% | |
| TTTGAAGGATTGGAGGTGAC+TGG | - | chr3_2:42462742-42462761 | Msa0406200:intron | 45.0% | |
| GCGAGAAGTAATGGTTAACC+TGG | + | chr3_2:42462932-42462951 | None:intergenic | 45.0% | |
| ACTGGACTCTCTTCCTAACT+GGG | + | chr3_2:42462959-42462978 | None:intergenic | 45.0% | |
| AGTTAGGAAGAGAGTCCAGT+GGG | - | chr3_2:42462959-42462978 | Msa0406200:CDS | 45.0% | |
| !! | TTATCTATTAAAAAAAATAA+GGG | + | chr3_2:42457254-42457273 | None:intergenic | 5.0% |
| !! | TTTATCTATTAAAAAAAATA+AGG | + | chr3_2:42457255-42457274 | None:intergenic | 5.0% |
| TGCCTAACGGTGAGGGATTA+AGG | - | chr3_2:42455009-42455028 | Msa0406200:CDS | 50.0% | |
| CTCCTTAATCCCTCACCGTT+AGG | + | chr3_2:42455014-42455033 | None:intergenic | 50.0% | |
| CATGAACTGACCATCACTCG+GGG | + | chr3_2:42455258-42455277 | None:intergenic | 50.0% | |
| GCATGAACTGACCATCACTC+GGG | + | chr3_2:42455259-42455278 | None:intergenic | 50.0% | |
| GGCATGAACTGACCATCACT+CGG | + | chr3_2:42455260-42455279 | None:intergenic | 50.0% | |
| GTGATGGTCAGTTCATGCCA+CGG | - | chr3_2:42455261-42455280 | Msa0406200:intron | 50.0% | |
| CAGTTCATGCCACGGATGAA+AGG | - | chr3_2:42455269-42455288 | Msa0406200:intron | 50.0% | |
| TGCCACGGATGAAAGGAAAG+AGG | - | chr3_2:42455276-42455295 | Msa0406200:intron | 50.0% | |
| GGAGGCCAATAAGGAACTGA+AGG | + | chr3_2:42455923-42455942 | None:intergenic | 50.0% | |
| GGAAATCGAGGAGGCCAATA+AGG | + | chr3_2:42455932-42455951 | None:intergenic | 50.0% | |
| TAGAAGAGGGGAAATCGAGG+AGG | + | chr3_2:42455941-42455960 | None:intergenic | 50.0% | |
| GGTTAGAAGAGGGGAAATCG+AGG | + | chr3_2:42455944-42455963 | None:intergenic | 50.0% | |
| CCGAAAAGGGAGGTTAGAAG+AGG | + | chr3_2:42455955-42455974 | None:intergenic | 50.0% | |
| TATGTCGGCACTCACATGAG+GGG | + | chr3_2:42456024-42456043 | None:intergenic | 50.0% | |
| GTCTCAGCGACTTATGCTAC+CGG | + | chr3_2:42456056-42456075 | None:intergenic | 50.0% | |
| !! | ACACCAGAGGAGTTTTCAGG+AGG | + | chr3_2:42456190-42456209 | None:intergenic | 50.0% |
| GGTGAATTAAGGGACACCAG+AGG | + | chr3_2:42456203-42456222 | None:intergenic | 50.0% | |
| TGCTGTGTAGGTAGCTCAGA+TGG | + | chr3_2:42456224-42456243 | None:intergenic | 50.0% | |
| ! | GGGACACCAGAGGAGTTTTT+AGG | + | chr3_2:42456341-42456360 | None:intergenic | 50.0% |
| GGTGAATTAAGGGACACCAG+AGG | + | chr3_2:42456203-42456222 | None:intergenic | 50.0% | |
| !! | TTCGATTTTGGCGTCTGGTG+GGG | - | chr3_2:42456560-42456579 | Msa0406200:intron | 50.0% |
| ! | GTGTGCTGCTGGTCCATAAT+TGG | - | chr3_2:42456639-42456658 | Msa0406200:intron | 50.0% |
| CCCCTGATTAAGATCCATGG+TGG | + | chr3_2:42457182-42457201 | None:intergenic | 50.0% | |
| CCATGGATCTTAATCAGGGG+CGG | - | chr3_2:42457182-42457201 | Msa0406200:intron | 50.0% | |
| GGATCCATGTTGGAGCTATG+TGG | - | chr3_2:42457203-42457222 | Msa0406200:intron | 50.0% | |
| AGTCCCACATAGCTCCAACA+TGG | + | chr3_2:42457210-42457229 | None:intergenic | 50.0% | |
| GCCCTTCAGATCATGTGCTA+TGG | - | chr3_2:42457697-42457716 | Msa0406200:intron | 50.0% | |
| GGCCATAGCACATGATCTGA+AGG | + | chr3_2:42457702-42457721 | None:intergenic | 50.0% | |
| CAGATCATGTGCTATGGCCT+TGG | - | chr3_2:42457703-42457722 | Msa0406200:intron | 50.0% | |
| AAGAAGCAACCTGACTCCCA+AGG | + | chr3_2:42457723-42457742 | None:intergenic | 50.0% | |
| GTGCACACGTTTCCTATGGT+TGG | - | chr3_2:42457770-42457789 | Msa0406200:intron | 50.0% | |
| GCACACGTTTCCTATGGTTG+GGG | - | chr3_2:42457772-42457791 | Msa0406200:intron | 50.0% | |
| ! | TTTTATTCGGGCTTTCGGGC+CGG | + | chr3_2:42457974-42457993 | None:intergenic | 50.0% |
| CCCGAATAAAACGAAGGGCT+TGG | - | chr3_2:42457983-42458002 | Msa0406200:intron | 50.0% | |
| !!! | TAACGGGCTTCGGGCTTTTA+CGG | + | chr3_2:42458055-42458074 | None:intergenic | 50.0% |
| TAAAAGCCCGAAGCCCGTTA+GGG | - | chr3_2:42458055-42458074 | Msa0406200:intron | 50.0% | |
| !!! | TTTTAATTACGCGGGCTGGC+GGG | + | chr3_2:42458105-42458124 | None:intergenic | 50.0% |
| TAAGGGAGAGAGACGTGAAC+TGG | + | chr3_2:42458244-42458263 | None:intergenic | 50.0% | |
| AGTTCACGTCTCTCTCCCTT+AGG | - | chr3_2:42458243-42458262 | Msa0406200:intron | 50.0% | |
| TGAATATTAGAGCCCGAGCC+CGG | + | chr3_2:42458767-42458786 | None:intergenic | 50.0% | |
| !! | TTCAACAGGGCTTTTTGGCC+CGG | - | chr3_2:42458796-42458815 | Msa0406200:intron | 50.0% |
| !! | TAACGGGCTTCGGGCTTTAT+CGG | + | chr3_2:42458823-42458842 | None:intergenic | 50.0% |
| ATAAAGCCCGAAGCCCGTTA+GGG | - | chr3_2:42458823-42458842 | Msa0406200:intron | 50.0% | |
| ATATCGCACCAGCAGCTTCA+CGG | + | chr3_2:42459109-42459128 | None:intergenic | 50.0% | |
| !! | GATTGACAGAGGCGTTAGGA+AGG | - | chr3_2:42459885-42459904 | Msa0406200:intron | 50.0% |
| !! | CAGAGGCGTTAGGAAGGATT+TGG | - | chr3_2:42459891-42459910 | Msa0406200:intron | 50.0% |
| !! | GAATGGGTGGTTTGGCTTGA+AGG | - | chr3_2:42460506-42460525 | Msa0406200:intron | 50.0% |
| GTGCTCATTTCGGATTGTCG+AGG | - | chr3_2:42460903-42460922 | Msa0406200:intron | 50.0% | |
| TGTTCAAAATCGGAGGTGGG+TGG | - | chr3_2:42460941-42460960 | Msa0406200:intron | 50.0% | |
| GTTCAAAATCGGAGGTGGGT+GGG | - | chr3_2:42460942-42460961 | Msa0406200:intron | 50.0% | |
| TTCAAAATCGGAGGTGGGTG+GGG | - | chr3_2:42460943-42460962 | Msa0406200:intron | 50.0% | |
| !! | CGTGCGTTACAGCTAGCTTT+AGG | + | chr3_2:42461008-42461027 | None:intergenic | 50.0% |
| AAAGCTAGCTGTAACGCACG+AGG | - | chr3_2:42461008-42461027 | Msa0406200:intron | 50.0% | |
| CCTTGTGCTTGCAGGGAATA+GGG | + | chr3_2:42461065-42461084 | None:intergenic | 50.0% | |
| TCCTTGTGCTTGCAGGGAAT+AGG | + | chr3_2:42461066-42461085 | None:intergenic | 50.0% | |
| AGTTTGCCTAGATGCTGCTG+AGG | - | chr3_2:42461110-42461129 | Msa0406200:intron | 50.0% | |
| !! | GGTTCCCCCCAAAAGGTATT+TGG | - | chr3_2:42461136-42461155 | Msa0406200:intron | 50.0% |
| GATCTCAAGCTCCACGTAGT+AGG | + | chr3_2:42461297-42461316 | None:intergenic | 50.0% | |
| TCTTCGCAAGTGTCAACCAG+GGG | - | chr3_2:42461404-42461423 | Msa0406200:intron | 50.0% | |
| TCTATACGTAACAGTCCCCC+TGG | + | chr3_2:42461423-42461442 | None:intergenic | 50.0% | |
| AGGTGTACTTCAGGGAGGAT+AGG | - | chr3_2:42462378-42462397 | Msa0406200:CDS | 50.0% | |
| GGTGTACTTCAGGGAGGATA+GGG | - | chr3_2:42462379-42462398 | Msa0406200:CDS | 50.0% | |
| TAATGCTGACCCATGCACCA+AGG | + | chr3_2:42462414-42462433 | None:intergenic | 50.0% | |
| AGACAGATCAGGAGTGGAAG+TGG | - | chr3_2:42462471-42462490 | Msa0406200:intron | 50.0% | |
| CACTCCAAATGATGGCAGCA+TGG | - | chr3_2:42462534-42462553 | Msa0406200:intron | 50.0% | |
| ATCGCCATGCTGCCATCATT+TGG | + | chr3_2:42462541-42462560 | None:intergenic | 50.0% | |
| CTTATGTGCAGCGCGTAACT+TGG | - | chr3_2:42462770-42462789 | Msa0406200:CDS | 50.0% | |
| CACTGGACTCTCTTCCTAAC+TGG | + | chr3_2:42462960-42462979 | None:intergenic | 50.0% | |
| CAGTTAGGAAGAGAGTCCAG+TGG | - | chr3_2:42462958-42462977 | Msa0406200:CDS | 50.0% | |
| GCAATCCTTTCCCCGAGTGA+TGG | - | chr3_2:42455245-42455264 | Msa0406200:intron | 55.0% | |
| ACTGACCATCACTCGGGGAA+AGG | + | chr3_2:42455253-42455272 | None:intergenic | 55.0% | |
| GGCCTCTTTCCTTTCATCCG+TGG | + | chr3_2:42455281-42455300 | None:intergenic | 55.0% | |
| ! | GGGACACCAGAGGAGTTTTC+AGG | + | chr3_2:42456193-42456212 | None:intergenic | 55.0% |
| CCGCCCCTGATTAAGATCCA+TGG | + | chr3_2:42457185-42457204 | None:intergenic | 55.0% | |
| AATCAGGGGCGGATCCATGT+TGG | - | chr3_2:42457193-42457212 | Msa0406200:intron | 55.0% | |
| !! | AACGGGCTTCGGGCTTTTAC+GGG | + | chr3_2:42458054-42458073 | None:intergenic | 55.0% |
| GTAAAAGCCCGAAGCCCGTT+AGG | - | chr3_2:42458054-42458073 | Msa0406200:intron | 55.0% | |
| ! | AGCTGCTGTTTGGGCTTGTG+TGG | - | chr3_2:42458136-42458155 | Msa0406200:intron | 55.0% |
| TTGGGCTTGTGTGGTGTGTG+TGG | - | chr3_2:42458145-42458164 | Msa0406200:intron | 55.0% | |
| ! | AACGGGCTTCGGGCTTTATC+GGG | + | chr3_2:42458822-42458841 | None:intergenic | 55.0% |
| GATAAAGCCCGAAGCCCGTT+AGG | - | chr3_2:42458822-42458841 | Msa0406200:intron | 55.0% | |
| ACTGGTGGGGAGATTGACAG+AGG | - | chr3_2:42459874-42459893 | Msa0406200:intron | 55.0% | |
| !! | GGGAGATTGACAGAGGCGTT+AGG | - | chr3_2:42459881-42459900 | Msa0406200:intron | 55.0% |
| TGCAGGCCTTTGCCTTGGTT+AGG | - | chr3_2:42460808-42460827 | Msa0406200:intron | 55.0% | |
| TGGGTGGGGATCTCTTTGCA+AGG | - | chr3_2:42460957-42460976 | Msa0406200:intron | 55.0% | |
| GATCTCTTTGCAAGGCGCGT+AGG | - | chr3_2:42460965-42460984 | Msa0406200:intron | 55.0% | |
| AGGGAATAGGGACATGCCTC+AGG | + | chr3_2:42461053-42461072 | None:intergenic | 55.0% | |
| CCCTATTCCCTGCAAGCACA+AGG | - | chr3_2:42461062-42461081 | Msa0406200:intron | 55.0% | |
| CTTCGCAAGTGTCAACCAGG+GGG | - | chr3_2:42461405-42461424 | Msa0406200:intron | 55.0% | |
| TGGCAAGGTGTACTTCAGGG+AGG | - | chr3_2:42462373-42462392 | Msa0406200:CDS | 55.0% | |
| GCAGCGCGTAACTTGGTCAA+AGG | - | chr3_2:42462777-42462796 | Msa0406200:CDS | 55.0% | |
| ! | CTGGGCACTGCGAGAAGTAA+TGG | + | chr3_2:42462941-42462960 | None:intergenic | 55.0% |
| ACTTCTCGCAGTGCCCAGTT+AGG | - | chr3_2:42462943-42462962 | Msa0406200:CDS | 55.0% | |
| TCAGGGACTCCCGAAAAGGG+AGG | + | chr3_2:42455965-42455984 | None:intergenic | 60.0% | |
| CAGGGGCGGATCCAGACTTT+AGG | + | chr3_2:42457546-42457565 | None:intergenic | 60.0% | |
| ! | GTGCTATGGCCTTGGGAGTC+AGG | - | chr3_2:42457711-42457730 | Msa0406200:intron | 60.0% |
| ACGGGATTGCTCGTATGGGC+CGG | - | chr3_2:42457952-42457971 | Msa0406200:intron | 60.0% | |
| TATACGGGCTCCCGGGCTAA+CGG | + | chr3_2:42458741-42458760 | None:intergenic | 60.0% | |
| TTAGCCCGGGAGCCCGTATA+GGG | - | chr3_2:42458741-42458760 | Msa0406200:intron | 60.0% | |
| AGCTGTCAAATCGGGCAGCC+CGG | + | chr3_2:42458864-42458883 | None:intergenic | 60.0% | |
| GTCAAGGACCGTGAAGCTGC+TGG | - | chr3_2:42459098-42459117 | Msa0406200:intron | 60.0% | |
| ACCAAGGCAAAGGCCTGCAG+TGG | + | chr3_2:42460807-42460826 | None:intergenic | 60.0% | |
| TGCCTAGATGCTGCTGAGGC+AGG | - | chr3_2:42461114-42461133 | Msa0406200:intron | 60.0% | |
| GCCTAGATGCTGCTGAGGCA+GGG | - | chr3_2:42461115-42461134 | Msa0406200:intron | 60.0% | |
| ACCCTGCCTCAGCAGCATCT+AGG | + | chr3_2:42461119-42461138 | None:intergenic | 60.0% | |
| ! | GCTTCGGGCTTTTACGGGCC+GGG | + | chr3_2:42458049-42458068 | None:intergenic | 65.0% |
| ! | GGCTTCGGGCTTTTACGGGC+CGG | + | chr3_2:42458050-42458069 | None:intergenic | 65.0% |
| !! | GGCTAGCCCTAACGGGCTTC+GGG | + | chr3_2:42458064-42458083 | None:intergenic | 65.0% |
| !! | GGGCTAGCCCTAACGGGCTT+CGG | + | chr3_2:42458065-42458084 | None:intergenic | 65.0% |
| ATACGGGCTCCCGGGCTAAC+GGG | + | chr3_2:42458740-42458759 | None:intergenic | 65.0% | |
| GTTAGCCCGGGAGCCCGTAT+AGG | - | chr3_2:42458740-42458759 | Msa0406200:intron | 65.0% | |
| ! | GCTTCGGGCTTTATCGGGCC+GGG | + | chr3_2:42458817-42458836 | None:intergenic | 65.0% |
| ! | GGCTTCGGGCTTTATCGGGC+CGG | + | chr3_2:42458818-42458837 | None:intergenic | 65.0% |
| CGTTTAGGCCCGGCCCTAAC+GGG | + | chr3_2:42458839-42458858 | None:intergenic | 65.0% | |
| CCGTTTAGGCCCGGCCCTAA+CGG | + | chr3_2:42458840-42458859 | None:intergenic | 65.0% | |
| CCGTTAGGGCCGGGCCTAAA+CGG | - | chr3_2:42458837-42458856 | Msa0406200:intron | 65.0% | |
| CGTTAGGGCCGGGCCTAAAC+GGG | - | chr3_2:42458838-42458857 | Msa0406200:intron | 65.0% | |
| GCCACTGCAGGCCTTTGCCT+TGG | - | chr3_2:42460803-42460822 | Msa0406200:intron | 65.0% | |
| GAGGCAGGGTTCCCCCCAAA+AGG | - | chr3_2:42461129-42461148 | Msa0406200:intron | 65.0% | |
| !! | CCGCACGGGCTAGCCCTAAC+GGG | + | chr3_2:42458071-42458090 | None:intergenic | 70.0% |
| !! | CCCGTTAGGGCTAGCCCGTG+CGG | - | chr3_2:42458068-42458087 | Msa0406200:intron | 70.0% |
| !! | CCCGCACGGGCTAGCCCTAA+CGG | + | chr3_2:42458072-42458091 | None:intergenic | 70.0% |
| !! | CCGTTAGGGCTAGCCCGTGC+GGG | - | chr3_2:42458069-42458088 | Msa0406200:intron | 70.0% |
| AGCCCGTATAGGGCCGGGCT+CGG | - | chr3_2:42458751-42458770 | Msa0406200:intron | 70.0% | |
| AGCCCGAGCCCGGCCCTATA+CGG | + | chr3_2:42458757-42458776 | None:intergenic | 70.0% | |
| AGCCCGAAGCCCGTTAGGGC+CGG | - | chr3_2:42458059-42458078 | Msa0406200:intron | 70.0% | |
| !! | GGGCTAGCCCGTGCGGGCTA+CGG | - | chr3_2:42458075-42458094 | Msa0406200:intron | 75.0% |
| ! | GGCTAGCCCGTGCGGGCTAC+GGG | - | chr3_2:42458076-42458095 | Msa0406200:intron | 75.0% |
| GGGCTACCCGTAGCCCGCAC+GGG | + | chr3_2:42458085-42458104 | None:intergenic | 75.0% | |
| CGGGCTACCCGTAGCCCGCA+CGG | + | chr3_2:42458086-42458105 | None:intergenic | 75.0% | |
| CCGGCCCTATACGGGCTCCC+GGG | + | chr3_2:42458748-42458767 | None:intergenic | 75.0% | |
| CCCGGGAGCCCGTATAGGGC+CGG | - | chr3_2:42458745-42458764 | Msa0406200:intron | 75.0% | |
| CCCGGCCCTATACGGGCTCC+CGG | + | chr3_2:42458749-42458768 | None:intergenic | 75.0% | |
| CCGGGAGCCCGTATAGGGCC+GGG | - | chr3_2:42458746-42458765 | Msa0406200:intron | 75.0% | |
| GCCCGTATAGGGCCGGGCTC+GGG | - | chr3_2:42458752-42458771 | Msa0406200:intron | 75.0% | |
| GCCCGAGCCCGGCCCTATAC+GGG | + | chr3_2:42458756-42458775 | None:intergenic | 75.0% | |
| GCCCGAAGCCCGTTAGGGCC+GGG | - | chr3_2:42458828-42458847 | Msa0406200:intron | 75.0% | |
| !! | GCCCGGCCCTAACGGGCTTC+GGG | + | chr3_2:42458832-42458851 | None:intergenic | 75.0% |
| !! | GGCCCGGCCCTAACGGGCTT+CGG | + | chr3_2:42458833-42458852 | None:intergenic | 75.0% |
| AGGGCCGGGCCTAAACGGGC+CGG | - | chr3_2:42458842-42458861 | Msa0406200:intron | 75.0% | |
| CAGCCCGGCCCGTTTAGGCC+CGG | + | chr3_2:42458849-42458868 | None:intergenic | 75.0% | |
| TCGGGCAGCCCGGCCCGTTT+AGG | + | chr3_2:42458854-42458873 | None:intergenic | 75.0% | |
| ! | GACGGGCCGGCCCGTTAGCC+CGG | - | chr3_2:42458727-42458746 | Msa0406200:intron | 80.0% |
| ! | ACGGGCCGGCCCGTTAGCCC+GGG | - | chr3_2:42458728-42458747 | Msa0406200:intron | 80.0% |
| !! | GGGCTCCCGGGCTAACGGGC+CGG | + | chr3_2:42458736-42458755 | None:intergenic | 80.0% |
| ! | GGGCCGGGCCTAAACGGGCC+GGG | - | chr3_2:42458843-42458862 | Msa0406200:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 42454325 | 42462992 | 42454325 | ID=Msa0406200;Name=Msa0406200 |
| chr3_2 | mRNA | 42454325 | 42462992 | 42454325 | ID=Msa0406200-mRNA-1;Parent=Msa0406200;Name=Msa0406200-mRNA-1;_AED=0.35;_eAED=0.35;_QI=0|0.08|0.15|0.92|1|1|13|0|662 |
| chr3_2 | exon | 42462753 | 42462992 | 42462753 | ID=Msa0406200-mRNA-1:exon:8186;Parent=Msa0406200-mRNA-1 |
| chr3_2 | exon | 42462540 | 42462623 | 42462540 | ID=Msa0406200-mRNA-1:exon:8185;Parent=Msa0406200-mRNA-1 |
| chr3_2 | exon | 42462178 | 42462444 | 42462178 | ID=Msa0406200-mRNA-1:exon:8184;Parent=Msa0406200-mRNA-1 |
| chr3_2 | exon | 42459540 | 42459611 | 42459540 | ID=Msa0406200-mRNA-1:exon:8183;Parent=Msa0406200-mRNA-1 |
| chr3_2 | exon | 42459380 | 42459441 | 42459380 | ID=Msa0406200-mRNA-1:exon:8182;Parent=Msa0406200-mRNA-1 |
| chr3_2 | exon | 42458177 | 42458256 | 42458177 | ID=Msa0406200-mRNA-1:exon:8181;Parent=Msa0406200-mRNA-1 |
| chr3_2 | exon | 42457363 | 42457454 | 42457363 | ID=Msa0406200-mRNA-1:exon:8180;Parent=Msa0406200-mRNA-1 |
| chr3_2 | exon | 42456735 | 42456912 | 42456735 | ID=Msa0406200-mRNA-1:exon:8179;Parent=Msa0406200-mRNA-1 |
| chr3_2 | exon | 42456167 | 42456487 | 42456167 | ID=Msa0406200-mRNA-1:exon:8178;Parent=Msa0406200-mRNA-1 |
| chr3_2 | exon | 42455633 | 42455673 | 42455633 | ID=Msa0406200-mRNA-1:exon:8177;Parent=Msa0406200-mRNA-1 |
| chr3_2 | exon | 42454936 | 42455060 | 42454936 | ID=Msa0406200-mRNA-1:exon:8176;Parent=Msa0406200-mRNA-1 |
| chr3_2 | exon | 42454658 | 42454840 | 42454658 | ID=Msa0406200-mRNA-1:exon:8175;Parent=Msa0406200-mRNA-1 |
| chr3_2 | exon | 42454325 | 42454568 | 42454325 | ID=Msa0406200-mRNA-1:exon:8174;Parent=Msa0406200-mRNA-1 |
| chr3_2 | CDS | 42462753 | 42462992 | 42462753 | ID=Msa0406200-mRNA-1:cds;Parent=Msa0406200-mRNA-1 |
| chr3_2 | CDS | 42462540 | 42462623 | 42462540 | ID=Msa0406200-mRNA-1:cds;Parent=Msa0406200-mRNA-1 |
| chr3_2 | CDS | 42462178 | 42462444 | 42462178 | ID=Msa0406200-mRNA-1:cds;Parent=Msa0406200-mRNA-1 |
| chr3_2 | CDS | 42459540 | 42459611 | 42459540 | ID=Msa0406200-mRNA-1:cds;Parent=Msa0406200-mRNA-1 |
| chr3_2 | CDS | 42459380 | 42459441 | 42459380 | ID=Msa0406200-mRNA-1:cds;Parent=Msa0406200-mRNA-1 |
| chr3_2 | CDS | 42458177 | 42458256 | 42458177 | ID=Msa0406200-mRNA-1:cds;Parent=Msa0406200-mRNA-1 |
| chr3_2 | CDS | 42457363 | 42457454 | 42457363 | ID=Msa0406200-mRNA-1:cds;Parent=Msa0406200-mRNA-1 |
| chr3_2 | CDS | 42456735 | 42456912 | 42456735 | ID=Msa0406200-mRNA-1:cds;Parent=Msa0406200-mRNA-1 |
| chr3_2 | CDS | 42456167 | 42456487 | 42456167 | ID=Msa0406200-mRNA-1:cds;Parent=Msa0406200-mRNA-1 |
| chr3_2 | CDS | 42455633 | 42455673 | 42455633 | ID=Msa0406200-mRNA-1:cds;Parent=Msa0406200-mRNA-1 |
| chr3_2 | CDS | 42454936 | 42455060 | 42454936 | ID=Msa0406200-mRNA-1:cds;Parent=Msa0406200-mRNA-1 |
| chr3_2 | CDS | 42454658 | 42454840 | 42454658 | ID=Msa0406200-mRNA-1:cds;Parent=Msa0406200-mRNA-1 |
| chr3_2 | CDS | 42454325 | 42454568 | 42454325 | ID=Msa0406200-mRNA-1:cds;Parent=Msa0406200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
