AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0348640

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0348640 MtrunA17_Chr3g0081571 80.365 713 80 6 1 711 9 663 0.0 1114
Msa0348640 MtrunA17_Chr3g0081541 46.246 666 258 21 105 711 9 633 4.33e-152 456
Msa0348640 MtrunA17_Chr3g0131611 57.364 129 55 0 356 484 12 140 2.50e-47 175
Msa0348640 MtrunA17_Chr4g0043691 42.537 134 74 1 351 481 10 143 2.77e-27 119
Msa0348640 MtrunA17_Chr7g0243491 32.000 175 110 2 325 493 3 174 9.38e-21 95.1
Msa0348640 MtrunA17_Chr2g0311141 39.200 125 73 1 360 481 115 239 7.22e-20 94.0
Msa0348640 MtrunA17_Chr8g0388501 33.333 135 81 3 354 481 175 307 7.65e-15 76.3
Msa0348640 MtrunA17_Chr7g0225451 32.857 140 85 3 354 486 163 300 5.64e-14 73.6
Msa0348640 MtrunA17_Chr3g0120061 32.593 135 82 3 354 481 184 316 5.69e-14 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0348640 AT2G32910.1 40.196 408 178 16 339 704 300 683 2.04e-59 213
Msa0348640 AT5G61910.5 51.351 148 66 3 338 482 40 184 9.13e-39 153
Msa0348640 AT5G61910.1 51.351 148 66 3 338 482 40 184 9.21e-39 154
Msa0348640 AT5G61910.2 51.351 148 66 3 338 482 40 184 9.21e-39 154
Msa0348640 AT5G61910.3 51.351 148 66 3 338 482 44 188 9.24e-39 154
Msa0348640 AT5G61910.4 51.351 148 66 3 338 482 40 184 6.36e-37 149
Msa0348640 AT2G35140.5 39.200 125 73 1 360 481 23 147 1.88e-20 97.1
Msa0348640 AT2G35140.1 39.200 125 73 1 360 481 23 147 1.88e-20 97.1
Msa0348640 AT2G35140.4 39.200 125 73 1 360 481 23 147 1.88e-20 97.1
Msa0348640 AT2G35140.2 39.200 125 73 1 360 481 23 147 1.88e-20 97.1
Msa0348640 AT2G35140.3 39.200 125 73 1 360 481 23 147 1.88e-20 97.1
Msa0348640 AT2G35140.6 39.200 125 73 1 360 481 49 173 2.37e-20 96.7
Msa0348640 AT3G11000.1 35.971 139 82 2 351 483 5 142 2.21e-19 92.4
Msa0348640 AT3G11000.2 35.971 139 82 2 351 483 124 261 3.15e-18 89.4
Msa0348640 AT5G01660.3 35.000 140 84 2 348 481 9 147 1.72e-16 83.6
Msa0348640 AT5G01660.2 35.000 140 84 2 348 481 9 147 2.97e-16 83.2
Msa0348640 AT5G01660.1 35.000 140 84 2 348 481 9 147 2.97e-16 83.2
Msa0348640 AT5G42050.1 35.556 135 78 3 354 481 212 344 1.80e-15 79.0
Msa0348640 AT3G27090.1 30.714 140 88 3 354 486 158 295 9.87e-12 67.0
Msa0348640 AT3G27090.2 30.714 140 88 3 354 486 158 295 9.87e-12 67.0
Msa0348640 AT3G27090.3 30.714 140 88 3 354 486 158 295 9.87e-12 67.0

Find 173 sgRNAs with CRISPR-Local

Find 223 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCACGGTCATTCAAATAAA+TGG 0.124768 3_1:+11417984 None:intergenic
GGTGGAACCATTGTTCTTCT+TGG 0.169296 3_1:+11419429 None:intergenic
CTTTCTTGAATTATTGCTTT+TGG 0.198180 3_1:+11418273 None:intergenic
GTTTACAAGGCTTCATCTTC+TGG 0.213182 3_1:-11418695 Msa0348640:CDS
CTTCTCATGTTAATCCTATA+AGG 0.213380 3_1:-11418098 Msa0348640:CDS
CTCTCATAAGGTTCCCTTAT+AGG 0.216544 3_1:+11418084 None:intergenic
ATTGGACACGGAGCATAATT+TGG 0.225761 3_1:-11419887 Msa0348640:CDS
TCCCCGTGATTCATTTCTTT+TGG 0.241748 3_1:-11418163 Msa0348640:CDS
TTTGATCTGAAGCTGCTATA+TGG 0.261549 3_1:-11418719 Msa0348640:CDS
GAAGCAAAAGGAGTCAAATA+AGG 0.267748 3_1:-11418954 Msa0348640:CDS
GGGTGTTTCATCTGCTAAAA+AGG 0.271160 3_1:-11418789 Msa0348640:CDS
CGTCATTGGTTTCATTCTGC+TGG 0.274963 3_1:+11419224 None:intergenic
CGTCCTTGGTTTCATTCTGC+TGG 0.275086 3_1:+11419140 None:intergenic
CGTCCTTGGTTTCATTCTGC+TGG 0.275086 3_1:+11419308 None:intergenic
AAGCTTGAACCCCGAGCTTT+TGG 0.280064 3_1:-11418665 Msa0348640:CDS
CAAAAGTTCCATATAGAGTT+TGG 0.298403 3_1:+11417432 None:intergenic
CATCGCTCCCAGCTCGTATT+TGG 0.301431 3_1:-11417854 Msa0348640:CDS
GGGAGGCTCCGGGTCGGGTC+AGG 0.305230 3_1:-11418251 Msa0348640:CDS
CCCGATATGGCTGCACTTGA+TGG 0.310834 3_1:+11417728 None:intergenic
CTCCCAGCTCGTATTTGGTT+GGG 0.320824 3_1:-11417849 Msa0348640:CDS
GCGATGGCCTCTCTACTTAA+AGG 0.323048 3_1:+11417871 None:intergenic
CTCCTTAGGTGGTTCGTCAT+TGG 0.324840 3_1:+11419210 None:intergenic
TTCTTCTTGGCCTTAAGTTT+AGG 0.327881 3_1:+11419442 None:intergenic
TTAGGATTAGAAGAAAATTC+AGG 0.330730 3_1:+11419598 None:intergenic
AGGAGTCAAATAAGGGTTCT+AGG 0.347866 3_1:-11418946 Msa0348640:CDS
GAGGCTCCGGGTCGGGTCAG+GGG 0.355764 3_1:-11418249 Msa0348640:CDS
TCCAACTTGTCTCCCCGATA+TGG 0.359947 3_1:+11417715 None:intergenic
CTCAATGAAGAAATGTTATT+CGG 0.370457 3_1:+11417511 None:intergenic
TTGATCTGAAGCTGCTATAT+GGG 0.370488 3_1:-11418718 Msa0348640:CDS
AAGTTATCAGTCCCGGAAAA+TGG 0.372046 3_1:+11417820 None:intergenic
CCATCAAGTGCAGCCATATC+GGG 0.373653 3_1:-11417728 Msa0348640:CDS
AGGCATAACGATCATCTATA+TGG 0.375161 3_1:+11417932 None:intergenic
TTCATCTAGGGATGCATACT+TGG 0.377709 3_1:-11417896 Msa0348640:CDS
ACCATCAAGTGCAGCCATAT+CGG 0.380439 3_1:-11417729 Msa0348640:CDS
CTCCTTAGGTGGTTCGTCCT+TGG 0.382911 3_1:+11419126 None:intergenic
CTCCTTAGGTGGTTCGTCCT+TGG 0.382911 3_1:+11419294 None:intergenic
AACAATGAAGTGAAGGTAAC+AGG 0.386239 3_1:-11419169 Msa0348640:CDS
AACAATGAAGTGAAGGTAAC+AGG 0.386239 3_1:-11419253 Msa0348640:CDS
TTGAAAATGCTTTCCGGTAG+CGG 0.386260 3_1:+11418511 None:intergenic
GCAGATGGGAAACTAATTTC+AGG 0.389060 3_1:-11419337 Msa0348640:CDS
GATCGTTATGCCTATCGATA+TGG 0.392738 3_1:-11417922 Msa0348640:CDS
ATCTCTGGTTCCTAAACTTA+AGG 0.404846 3_1:-11419452 Msa0348640:CDS
GGCTGCACTTGATGGTAATC+AGG 0.406996 3_1:+11417736 None:intergenic
TTCTGATTCTTTCCCGCTAC+CGG 0.412679 3_1:-11418524 Msa0348640:CDS
AGAAAGGGAGGCTCCGGGTC+GGG 0.416722 3_1:-11418256 Msa0348640:CDS
GATCAAGATGAGGCCAAGAT+TGG 0.417869 3_1:-11419865 Msa0348640:CDS
CGTAGACTTTCAACATGAAC+GGG 0.420201 3_1:+11418015 None:intergenic
TCTGGTTTACCAGATCCTTC+AGG 0.426498 3_1:+11419529 None:intergenic
TCCCAGCTCGTATTTGGTTG+GGG 0.430175 3_1:-11417848 Msa0348640:CDS
ATCGATATGGTGCTTCATCT+AGG 0.431246 3_1:-11417909 Msa0348640:CDS
TTCTCATGTTAATCCTATAA+GGG 0.432079 3_1:-11418097 Msa0348640:CDS
CATAAATGCTTAGGTACCTC+TGG 0.436726 3_1:-11417537 Msa0348640:three_prime_UTR
CACTGAGCATAATGTGGATC+AGG 0.437810 3_1:-11419842 Msa0348640:CDS
AATTCAAGAAAGGGAGGCTC+CGG 0.439056 3_1:-11418262 Msa0348640:CDS
GGAGGCTCCGGGTCGGGTCA+GGG 0.441116 3_1:-11418250 Msa0348640:CDS
GTCATTGGTTTCATTCTGCT+GGG 0.443034 3_1:+11419225 None:intergenic
GTCCTTGGTTTCATTCTGCT+GGG 0.443158 3_1:+11419141 None:intergenic
GTCCTTGGTTTCATTCTGCT+GGG 0.443158 3_1:+11419309 None:intergenic
GCTCCCAGCTCGTATTTGGT+TGG 0.447102 3_1:-11417850 Msa0348640:CDS
TGATCAAGAAGAGAGCAAAT+TGG 0.447851 3_1:-11419905 Msa0348640:CDS
TCCTGATGACTCATCTCTAT+AGG 0.448180 3_1:+11419037 None:intergenic
ATTATGCTCAGTGCCAATCT+TGG 0.452938 3_1:+11419852 None:intergenic
GGAGAGAGATCGTTGAAGAT+AGG 0.455533 3_1:-11417792 Msa0348640:CDS
TGAAAATGCTTTCCGGTAGC+GGG 0.460509 3_1:+11418512 None:intergenic
CAAAAGCAATAATTCAAGAA+AGG 0.463144 3_1:-11418272 Msa0348640:CDS
GAAGAGTGAAGAGAAGCAAA+AGG 0.464592 3_1:-11418966 Msa0348640:CDS
TGTTCATAATCTCTCTCATA+AGG 0.464732 3_1:+11418072 None:intergenic
AAGTGAAGGTAAGTCAGAAT+AGG 0.466413 3_1:-11419078 Msa0348640:CDS
TTTAAATGCTGTTTAATGTA+CGG 0.467656 3_1:-11417487 Msa0348640:three_prime_UTR
AAACTTGCCACCAAAAGCTC+GGG 0.468932 3_1:+11418655 None:intergenic
TGGTGGCAAGTTTCCTGCCC+AGG 0.469476 3_1:-11418645 Msa0348640:intron
GCCATATCGGGGAGACAAGT+TGG 0.470207 3_1:-11417716 Msa0348640:CDS
TCTATGAATCATAAATGCTT+AGG 0.473948 3_1:-11417546 Msa0348640:three_prime_UTR
AACATGCAATTTGAATCCCT+TGG 0.474513 3_1:-11417624 Msa0348640:three_prime_UTR
TTGTTTCCGCTATCGTGTCA+TGG 0.475889 3_1:-11418810 Msa0348640:CDS
ACACGATAGCGGAAACAATC+AGG 0.480874 3_1:+11418815 None:intergenic
TTTCTTCCTCACAATCTTGG+TGG 0.481912 3_1:+11419411 None:intergenic
GTTATGCTCAGTGGCCACTC+TGG 0.482592 3_1:+11419774 None:intergenic
CATGAACGGGAACATTGCTT+TGG 0.482998 3_1:+11418028 None:intergenic
AAAAGCAATAATTCAAGAAA+GGG 0.484665 3_1:-11418271 Msa0348640:CDS
AAGCAAAAGGAGTCAAATAA+GGG 0.487948 3_1:-11418953 Msa0348640:CDS
GCTGCTATATGGGGTTTACA+AGG 0.488194 3_1:-11418708 Msa0348640:CDS
TCACGGTCATTCAAATAAAT+GGG 0.488961 3_1:+11417985 None:intergenic
GAGTATAGCTCTGCTGTTCA+CGG 0.493062 3_1:+11417968 None:intergenic
TCCTATAGAGATGAGTCATC+AGG 0.493906 3_1:-11419038 Msa0348640:CDS
CTCCAAAAGAAATGAATCAC+GGG 0.498615 3_1:+11418161 None:intergenic
TTGCACAGGGAAAGAGCTGT+TGG 0.501730 3_1:-11418213 Msa0348640:CDS
ACTGCTGAATGAGCTCCAAC+TGG 0.502972 3_1:+11418318 None:intergenic
TTGTGAGGAAGAAAATAAAG+AGG 0.510396 3_1:-11419402 Msa0348640:CDS
GAAACTTGCCACCAAAAGCT+CGG 0.512639 3_1:+11418654 None:intergenic
ACTCTTCCACCTGAAGGATC+TGG 0.515483 3_1:-11419538 Msa0348640:CDS
CGGGTCGGGTCAGGGGATCA+CGG 0.520075 3_1:-11418242 Msa0348640:CDS
TAACATGAAAGATAGTCAAA+AGG 0.528007 3_1:+11417593 None:intergenic
TACAAGGCTTCATCTTCTGG+TGG 0.531692 3_1:-11418692 Msa0348640:CDS
AATACGAGAGTAACCTGGGC+AGG 0.534110 3_1:+11418632 None:intergenic
AGATAAGGAGATCAATCTGT+TGG 0.536087 3_1:-11419008 Msa0348640:CDS
GAATGCTCTCACAATGCAGA+TGG 0.536525 3_1:-11419352 Msa0348640:CDS
CGTGATCCCCTGACCCGACC+CGG 0.537666 3_1:+11418243 None:intergenic
ACTTGTGCAACAGTAAGTTC+TGG 0.541360 3_1:+11418445 None:intergenic
ACTTGAATCAAGAAGAGAGC+AGG 0.543234 3_1:-11419714 Msa0348640:CDS
TGTTTCCGCTATCGTGTCAT+GGG 0.543621 3_1:-11418809 Msa0348640:CDS
TCGATATGGTGCTTCATCTA+GGG 0.543884 3_1:-11417908 Msa0348640:CDS
CCTTCGAAAGTTATCAGTCC+CGG 0.544847 3_1:+11417813 None:intergenic
ATTGATCAAGAGAGCAAGAT+GGG 0.546226 3_1:-11419634 Msa0348640:CDS
AACCAAGGACGAACCACCTA+AGG 0.552876 3_1:-11419128 Msa0348640:CDS
AACCAATGACGAACCACCTA+AGG 0.552876 3_1:-11419212 Msa0348640:CDS
AACCAAGGACGAACCACCTA+AGG 0.552876 3_1:-11419296 Msa0348640:CDS
GTAACCTTCTCACTCAACTC+TGG 0.553426 3_1:+11419511 None:intergenic
CAAATACGAGCTGGGAGCGA+TGG 0.559692 3_1:+11417855 None:intergenic
GATGTTCTACGAATCAAGCC+TGG 0.562641 3_1:-11418764 Msa0348640:CDS
TCGTAGACTTTCAACATGAA+CGG 0.562675 3_1:+11418014 None:intergenic
GTTATGCTCAGTGACCATCT+TGG 0.566913 3_1:+11419813 None:intergenic
GGTTACTCCACAATCATTGA+AGG 0.568854 3_1:-11419494 Msa0348640:CDS
GGAACATTGCTTTGGTAGCG+AGG 0.570176 3_1:+11418036 None:intergenic
TTGATCCATGTTATGCTCAG+TGG 0.571369 3_1:+11419765 None:intergenic
TAAAGAAAGAGCGTAAGTCC+AGG 0.580709 3_1:+11418746 None:intergenic
ATTCAAGAAAGGGAGGCTCC+GGG 0.581550 3_1:-11418261 Msa0348640:CDS
CTTGGCTCCTTTAAGTAGAG+AGG 0.581675 3_1:-11417878 Msa0348640:CDS
AGTCAGCGACGAGAATATGA+AGG 0.582476 3_1:+11417649 None:intergenic
GATCACGGCACAATTTGCAC+AGG 0.582541 3_1:-11418227 Msa0348640:CDS
AAGAAAGGGAGGCTCCGGGT+CGG 0.582964 3_1:-11418257 Msa0348640:CDS
GTCAAAAGGAAGACATGCCA+AGG 0.583234 3_1:+11417607 None:intergenic
ACTAGACTCTTCCGACCAGT+TGG 0.585606 3_1:-11418333 Msa0348640:CDS
ACATCGATCAAGAAGAGAGT+AGG 0.587941 3_1:-11419675 Msa0348640:CDS
AGAAAATGATGACAACAAGA+AGG 0.588292 3_1:-11419563 Msa0348640:CDS
AATGCTCTCACAATGCAGAT+GGG 0.589090 3_1:-11419351 Msa0348640:CDS
TCTCCAAAAGAAATGAATCA+CGG 0.589282 3_1:+11418160 None:intergenic
AGCAATAATTCAAGAAAGGG+AGG 0.591340 3_1:-11418268 Msa0348640:CDS
TGATCTGAAGCTGCTATATG+GGG 0.591849 3_1:-11418717 Msa0348640:CDS
CCGGGACTGATAACTTTCGA+AGG 0.598215 3_1:-11417813 Msa0348640:CDS
AGATGAAGCACCATATCGAT+AGG 0.598566 3_1:+11417912 None:intergenic
AGTGGCCACTGAGCATAACA+TGG 0.601846 3_1:-11419770 Msa0348640:CDS
ATTATCGAGCTTATGATCGA+AGG 0.604784 3_1:-11418134 Msa0348640:CDS
CCCAGCTCGTATTTGGTTGG+GGG 0.605181 3_1:-11417847 Msa0348640:CDS
GATCAAGAAGAGAACAAGAT+GGG 0.607363 3_1:-11419748 Msa0348640:CDS
GATGGTCACTGAGCATAACA+TGG 0.612089 3_1:-11419809 Msa0348640:CDS
AGCTTATGATCGAAGGAATG+TGG 0.612129 3_1:-11418127 Msa0348640:CDS
GGCGGAAAACAATGAAGTGA+AGG 0.613148 3_1:-11419092 Msa0348640:CDS
GGCGGAAAACAATGAAGTGA+AGG 0.613148 3_1:-11419176 Msa0348640:CDS
GGCGGAAAACAATGAAGTGA+AGG 0.613148 3_1:-11419260 Msa0348640:CDS
GGATCAAGAAGAGAACAAGA+TGG 0.613905 3_1:-11419749 Msa0348640:CDS
CGATCAAGAAGAGAGTAGGA+TGG 0.615486 3_1:-11419671 Msa0348640:CDS
CATTGATCAAGAGAGCAAGA+TGG 0.617270 3_1:-11419635 Msa0348640:CDS
CTTAAGGCCAAGAAGAACAA+TGG 0.617658 3_1:-11419436 Msa0348640:CDS
TAACGAGATGAAACTCGTAA+AGG 0.618460 3_1:+11417685 None:intergenic
GGTAGCGAGGTTCCACGAGA+CGG 0.618782 3_1:+11418049 None:intergenic
GATTGGCACTGAGCATAATG+TGG 0.618979 3_1:-11419848 Msa0348640:CDS
GGTTTACCAGATCCTTCAGG+TGG 0.624897 3_1:+11419532 None:intergenic
CTGAATGAGCTCCAACTGGT+CGG 0.627272 3_1:+11418322 None:intergenic
AGATTATGAACACCGTCTCG+TGG 0.627679 3_1:-11418061 Msa0348640:CDS
TAAACCAGAGTTGAGTGAGA+AGG 0.630738 3_1:-11419515 Msa0348640:CDS
TCATGTTGAAAGTCTACGAA+GGG 0.632649 3_1:-11418010 Msa0348640:CDS
CATCAAGTGCAGCCATATCG+GGG 0.640837 3_1:-11417727 Msa0348640:CDS
AAGGATACTCTTCCACCTGA+AGG 0.642315 3_1:-11419544 Msa0348640:CDS
AGAAGAGAGCAAATTGGACA+CGG 0.642496 3_1:-11419899 Msa0348640:CDS
GCATAATTTGGATCAAGATG+AGG 0.644925 3_1:-11419875 Msa0348640:CDS
ATGGTTCCACCAAGATTGTG+AGG 0.649895 3_1:-11419417 Msa0348640:CDS
GTCAGCGACGAGAATATGAA+GGG 0.650249 3_1:+11417650 None:intergenic
AGATGAAACTCGTAAAGGTG+AGG 0.658810 3_1:+11417690 None:intergenic
GAATCAAGAAGAGAGCAGGA+TGG 0.659853 3_1:-11419710 Msa0348640:CDS
TCAAAAGGAAGACATGCCAA+GGG 0.670808 3_1:+11417608 None:intergenic
AACTTGCCACCAAAAGCTCG+GGG 0.678427 3_1:+11418656 None:intergenic
TTCATGTTGAAAGTCTACGA+AGG 0.679592 3_1:-11418011 Msa0348640:CDS
AAATGTTATTCGGAATCCAG+AGG 0.684189 3_1:+11417521 None:intergenic
AGTCAAATAAGGGTTCTAGG+AGG 0.684219 3_1:-11418943 Msa0348640:CDS
AAACACCCATGACACGATAG+CGG 0.684982 3_1:+11418804 None:intergenic
ACATCAACTTGAGCGTCGAG+AGG 0.689167 3_1:-11418190 Msa0348640:CDS
TACCCAGCAGAATGAAACCA+AGG 0.690051 3_1:-11419143 Msa0348640:CDS
TACCCAGCAGAATGAAACCA+AGG 0.690051 3_1:-11419311 Msa0348640:CDS
TCCAAAAGAAATGAATCACG+GGG 0.690485 3_1:+11418162 None:intergenic
GGATCAGGAAGAGACCAAGA+TGG 0.692400 3_1:-11419827 Msa0348640:CDS
ATCACGGCACAATTTGCACA+GGG 0.699336 3_1:-11418226 Msa0348640:CDS
GGATCAAGAAGAGTCCAGAG+TGG 0.771185 3_1:-11419788 Msa0348640:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGTAAATTGACATTTTTTTT+TGG + chr3_1:11419918-11419937 None:intergenic 15.0%
!! AAAAATTGTAAAGAAATCTC+TGG - chr3_1:11417905-11417924 Msa0348640:CDS 20.0%
!!! ATTTTGCTATTTGTTTATTC+TGG - chr3_1:11418760-11418779 Msa0348640:CDS 20.0%
!!! GTTTTTTTATTGCTATATCA+TGG - chr3_1:11418979-11418998 Msa0348640:CDS 20.0%
!! AAAAGCAATAATTCAAGAAA+GGG - chr3_1:11419101-11419120 Msa0348640:CDS 20.0%
!!! TTTAAATGCTGTTTAATGTA+CGG - chr3_1:11419885-11419904 Msa0348640:CDS 20.0%
! TTAGGATTAGAAGAAAATTC+AGG + chr3_1:11417777-11417796 None:intergenic 25.0%
! AAAAACAAAAACAAGCCAAA+TGG - chr3_1:11418455-11418474 Msa0348640:CDS 25.0%
! TAAAAAAACAGAAAACCAAG+AGG + chr3_1:11418968-11418987 None:intergenic 25.0%
!! CTTTCTTGAATTATTGCTTT+TGG + chr3_1:11419102-11419121 None:intergenic 25.0%
! CAAAAGCAATAATTCAAGAA+AGG - chr3_1:11419100-11419119 Msa0348640:CDS 25.0%
! TTCTCATGTTAATCCTATAA+GGG - chr3_1:11419275-11419294 Msa0348640:CDS 25.0%
! TAACATGAAAGATAGTCAAA+AGG + chr3_1:11419782-11419801 None:intergenic 25.0%
! TCTATGAATCATAAATGCTT+AGG - chr3_1:11419826-11419845 Msa0348640:CDS 25.0%
! CTCAATGAAGAAATGTTATT+CGG + chr3_1:11419864-11419883 None:intergenic 25.0%
AGAAAATGATGACAACAAGA+AGG - chr3_1:11417809-11417828 Msa0348640:CDS 30.0%
!!! TTTTTTGCCTTCAATGATTG+TGG + chr3_1:11417888-11417907 None:intergenic 30.0%
! TATTTTCTTCCTCACAATCT+TGG + chr3_1:11417967-11417986 None:intergenic 30.0%
TTGTGAGGAAGAAAATAAAG+AGG - chr3_1:11417970-11417989 Msa0348640:CDS 30.0%
AAGAGGAAGAACAAAAAAGT+AGG - chr3_1:11417987-11418006 Msa0348640:CDS 30.0%
TCATCAGGATGAAAAAGATA+AGG - chr3_1:11418349-11418368 Msa0348640:intron 30.0%
AAGCAAAAGGAGTCAAATAA+GGG - chr3_1:11418419-11418438 Msa0348640:intron 30.0%
! TGCTATTTGTTTATTCTGGT+TGG - chr3_1:11418764-11418783 Msa0348640:CDS 30.0%
!! TGGTTGGTCTTTATTAATGA+TGG - chr3_1:11418780-11418799 Msa0348640:CDS 30.0%
! CATTTTCAAAAAGGCTATCA+AGG - chr3_1:11418875-11418894 Msa0348640:CDS 30.0%
TCTCCAAAAGAAATGAATCA+CGG + chr3_1:11419215-11419234 None:intergenic 30.0%
CTTCTCATGTTAATCCTATA+AGG - chr3_1:11419274-11419293 Msa0348640:CDS 30.0%
TGTTCATAATCTCTCTCATA+AGG + chr3_1:11419303-11419322 None:intergenic 30.0%
TCACGGTCATTCAAATAAAT+GGG + chr3_1:11419390-11419409 None:intergenic 30.0%
TTCACGGTCATTCAAATAAA+TGG + chr3_1:11419391-11419410 None:intergenic 30.0%
TGATCAAGAAGAGAGCAAAT+TGG - chr3_1:11417467-11417486 Msa0348640:three_prime_UTR 35.0%
GCATAATTTGGATCAAGATG+AGG - chr3_1:11417497-11417516 Msa0348640:three_prime_UTR 35.0%
GATCAAGAAGAGAACAAGAT+GGG - chr3_1:11417624-11417643 Msa0348640:three_prime_UTR 35.0%
ATTGATCAAGAGAGCAAGAT+GGG - chr3_1:11417738-11417757 Msa0348640:CDS 35.0%
! TTTTCTGATGACTGAGGATT+AGG + chr3_1:11417795-11417814 None:intergenic 35.0%
! TCATCATTTTCTGATGACTG+AGG + chr3_1:11417801-11417820 None:intergenic 35.0%
! ATCTCTGGTTCCTAAACTTA+AGG - chr3_1:11417920-11417939 Msa0348640:CDS 35.0%
!! TTCTTCTTGGCCTTAAGTTT+AGG + chr3_1:11417933-11417952 None:intergenic 35.0%
AACAATGAAGTGAAGGTAAC+AGG - chr3_1:11418119-11418138 Msa0348640:CDS 35.0%
AACAATGAAGTGAAGGTAAC+AGG - chr3_1:11418119-11418138 Msa0348640:CDS 35.0%
AAGTGAAGGTAAGTCAGAAT+AGG - chr3_1:11418294-11418313 Msa0348640:CDS 35.0%
AGATAAGGAGATCAATCTGT+TGG - chr3_1:11418364-11418383 Msa0348640:intron 35.0%
GAAGCAAAAGGAGTCAAATA+AGG - chr3_1:11418418-11418437 Msa0348640:intron 35.0%
! TTTGATCTGAAGCTGCTATA+TGG - chr3_1:11418653-11418672 Msa0348640:CDS 35.0%
! TTGATCTGAAGCTGCTATAT+GGG - chr3_1:11418654-11418673 Msa0348640:CDS 35.0%
!!! ACCGGAAAGCATTTTCAAAA+AGG - chr3_1:11418866-11418885 Msa0348640:CDS 35.0%
!! GCCTTTTTGAAAATGCTTTC+CGG + chr3_1:11418870-11418889 None:intergenic 35.0%
GAGAATCAAATGTTACCTCT+TGG - chr3_1:11418950-11418969 Msa0348640:CDS 35.0%
ATATTCAAATGTTCTGCTCC+AGG - chr3_1:11419005-11419024 Msa0348640:CDS 35.0%
! GCTTTTGGATGAGAAAAAAC+AGG + chr3_1:11419087-11419106 None:intergenic 35.0%
AGCAATAATTCAAGAAAGGG+AGG - chr3_1:11419104-11419123 Msa0348640:CDS 35.0%
TCCAAAAGAAATGAATCACG+GGG + chr3_1:11419213-11419232 None:intergenic 35.0%
CTCCAAAAGAAATGAATCAC+GGG + chr3_1:11419214-11419233 None:intergenic 35.0%
ATTATCGAGCTTATGATCGA+AGG - chr3_1:11419238-11419257 Msa0348640:CDS 35.0%
TCGTAGACTTTCAACATGAA+CGG + chr3_1:11419361-11419380 None:intergenic 35.0%
TTCATGTTGAAAGTCTACGA+AGG - chr3_1:11419361-11419380 Msa0348640:CDS 35.0%
TCATGTTGAAAGTCTACGAA+GGG - chr3_1:11419362-11419381 Msa0348640:CDS 35.0%
AGGCATAACGATCATCTATA+TGG + chr3_1:11419443-11419462 None:intergenic 35.0%
TAACGAGATGAAACTCGTAA+AGG + chr3_1:11419690-11419709 None:intergenic 35.0%
AACATGCAATTTGAATCCCT+TGG - chr3_1:11419748-11419767 Msa0348640:CDS 35.0%
AAATGTTATTCGGAATCCAG+AGG + chr3_1:11419854-11419873 None:intergenic 35.0%
AGAAGAGAGCAAATTGGACA+CGG - chr3_1:11417473-11417492 Msa0348640:three_prime_UTR 40.0%
ATTGGACACGGAGCATAATT+TGG - chr3_1:11417485-11417504 Msa0348640:three_prime_UTR 40.0%
ATTATGCTCAGTGCCAATCT+TGG + chr3_1:11417523-11417542 None:intergenic 40.0%
TTGATCCATGTTATGCTCAG+TGG + chr3_1:11417571-11417590 None:intergenic 40.0%
GGATCAAGAAGAGAACAAGA+TGG - chr3_1:11417623-11417642 Msa0348640:three_prime_UTR 40.0%
ACTTGAATCAAGAAGAGAGC+AGG - chr3_1:11417658-11417677 Msa0348640:CDS 40.0%
ACATCGATCAAGAAGAGAGT+AGG - chr3_1:11417697-11417716 Msa0348640:CDS 40.0%
CATTGATCAAGAGAGCAAGA+TGG - chr3_1:11417737-11417756 Msa0348640:CDS 40.0%
TAAACCAGAGTTGAGTGAGA+AGG - chr3_1:11417857-11417876 Msa0348640:CDS 40.0%
GGTTACTCCACAATCATTGA+AGG - chr3_1:11417878-11417897 Msa0348640:CDS 40.0%
CTTAAGGCCAAGAAGAACAA+TGG - chr3_1:11417936-11417955 Msa0348640:CDS 40.0%
TTTCTTCCTCACAATCTTGG+TGG + chr3_1:11417964-11417983 None:intergenic 40.0%
AATGCTCTCACAATGCAGAT+GGG - chr3_1:11418021-11418040 Msa0348640:CDS 40.0%
GCAGATGGGAAACTAATTTC+AGG - chr3_1:11418035-11418054 Msa0348640:CDS 40.0%
ACCACCTAAGGAGAAAAATC+AGG - chr3_1:11418088-11418107 Msa0348640:CDS 40.0%
! TCCTGATTTTTCTCCTTAGG+TGG + chr3_1:11418092-11418111 None:intergenic 40.0%
ACCTAAGGAGAAAAATCAGG+AGG - chr3_1:11418091-11418110 Msa0348640:CDS 40.0%
TAAGGAGAAAAATCAGGAGG+CGG - chr3_1:11418094-11418113 Msa0348640:CDS 40.0%
!! GTCATTGGTTTCATTCTGCT+GGG + chr3_1:11418150-11418169 None:intergenic 40.0%
ACCACCTAAGGAGAAAAATC+AGG - chr3_1:11418088-11418107 Msa0348640:CDS 40.0%
! TCCTGATTTTTCTCCTTAGG+TGG + chr3_1:11418092-11418111 None:intergenic 40.0%
ACCTAAGGAGAAAAATCAGG+AGG - chr3_1:11418091-11418110 Msa0348640:CDS 40.0%
TAAGGAGAAAAATCAGGAGG+CGG - chr3_1:11418094-11418113 Msa0348640:CDS 40.0%
ACCACCTAAGGAGAAAAATC+AGG - chr3_1:11418088-11418107 Msa0348640:CDS 40.0%
! TCCTGATTTTTCTCCTTAGG+TGG + chr3_1:11418092-11418111 None:intergenic 40.0%
ACCTAAGGAGAAAAATCAGG+AGG - chr3_1:11418091-11418110 Msa0348640:CDS 40.0%
TAAGGAGAAAAATCAGGAGG+CGG - chr3_1:11418094-11418113 Msa0348640:CDS 40.0%
TCCTATAGAGATGAGTCATC+AGG - chr3_1:11418334-11418353 Msa0348640:CDS 40.0%
TCCTGATGACTCATCTCTAT+AGG + chr3_1:11418338-11418357 None:intergenic 40.0%
GAAGAGTGAAGAGAAGCAAA+AGG - chr3_1:11418406-11418425 Msa0348640:intron 40.0%
AGGAGTCAAATAAGGGTTCT+AGG - chr3_1:11418426-11418445 Msa0348640:intron 40.0%
!! AGTCAAATAAGGGTTCTAGG+AGG - chr3_1:11418429-11418448 Msa0348640:intron 40.0%
GACAAAAAGAGTGACAAGCT+TGG - chr3_1:11418500-11418519 Msa0348640:CDS 40.0%
AAAAAGAGTGACAAGCTTGG+TGG - chr3_1:11418503-11418522 Msa0348640:CDS 40.0%
GGGTGTTTCATCTGCTAAAA+AGG - chr3_1:11418583-11418602 Msa0348640:intron 40.0%
! TAAAGAAAGAGCGTAAGTCC+AGG + chr3_1:11418629-11418648 None:intergenic 40.0%
! TGATCTGAAGCTGCTATATG+GGG - chr3_1:11418655-11418674 Msa0348640:CDS 40.0%
GTTTACAAGGCTTCATCTTC+TGG - chr3_1:11418677-11418696 Msa0348640:CDS 40.0%
GCAAAATACGAGAGTAACCT+GGG + chr3_1:11418747-11418766 None:intergenic 40.0%
AGCAAAATACGAGAGTAACC+TGG + chr3_1:11418748-11418767 None:intergenic 40.0%
TGCTAATAGCTGACAACTTC+AGG - chr3_1:11418809-11418828 Msa0348640:CDS 40.0%
TTGAAAATGCTTTCCGGTAG+CGG + chr3_1:11418864-11418883 None:intergenic 40.0%
ACTTGTGCAACAGTAAGTTC+TGG + chr3_1:11418930-11418949 None:intergenic 40.0%
! TCCCCGTGATTCATTTCTTT+TGG - chr3_1:11419209-11419228 Msa0348640:CDS 40.0%
AGCTTATGATCGAAGGAATG+TGG - chr3_1:11419245-11419264 Msa0348640:CDS 40.0%
CTCTCATAAGGTTCCCTTAT+AGG + chr3_1:11419291-11419310 None:intergenic 40.0%
CGTAGACTTTCAACATGAAC+GGG + chr3_1:11419360-11419379 None:intergenic 40.0%
GATCGTTATGCCTATCGATA+TGG - chr3_1:11419450-11419469 Msa0348640:CDS 40.0%
! AGATGAAGCACCATATCGAT+AGG + chr3_1:11419463-11419482 None:intergenic 40.0%
ATCGATATGGTGCTTCATCT+AGG - chr3_1:11419463-11419482 Msa0348640:CDS 40.0%
TCGATATGGTGCTTCATCTA+GGG - chr3_1:11419464-11419483 Msa0348640:CDS 40.0%
TTCATCTAGGGATGCATACT+TGG - chr3_1:11419476-11419495 Msa0348640:CDS 40.0%
AAGTTATCAGTCCCGGAAAA+TGG + chr3_1:11419555-11419574 None:intergenic 40.0%
AGATGAAACTCGTAAAGGTG+AGG + chr3_1:11419685-11419704 None:intergenic 40.0%
! TCATCTCGTTACTCTTTTGC+TGG - chr3_1:11419699-11419718 Msa0348640:CDS 40.0%
TCAAAAGGAAGACATGCCAA+GGG + chr3_1:11419767-11419786 None:intergenic 40.0%
CATAAATGCTTAGGTACCTC+TGG - chr3_1:11419835-11419854 Msa0348640:CDS 40.0%
GATCAAGATGAGGCCAAGAT+TGG - chr3_1:11417507-11417526 Msa0348640:three_prime_UTR 45.0%
! GATTGGCACTGAGCATAATG+TGG - chr3_1:11417524-11417543 Msa0348640:three_prime_UTR 45.0%
CACTGAGCATAATGTGGATC+AGG - chr3_1:11417530-11417549 Msa0348640:three_prime_UTR 45.0%
GTTATGCTCAGTGACCATCT+TGG + chr3_1:11417562-11417581 None:intergenic 45.0%
GATGGTCACTGAGCATAACA+TGG - chr3_1:11417563-11417582 Msa0348640:three_prime_UTR 45.0%
GAATCAAGAAGAGAGCAGGA+TGG - chr3_1:11417662-11417681 Msa0348640:CDS 45.0%
CGATCAAGAAGAGAGTAGGA+TGG - chr3_1:11417701-11417720 Msa0348640:CDS 45.0%
AAGGATACTCTTCCACCTGA+AGG - chr3_1:11417828-11417847 Msa0348640:CDS 45.0%
! TCTGGTTTACCAGATCCTTC+AGG + chr3_1:11417846-11417865 None:intergenic 45.0%
GTAACCTTCTCACTCAACTC+TGG + chr3_1:11417864-11417883 None:intergenic 45.0%
GGTGGAACCATTGTTCTTCT+TGG + chr3_1:11417946-11417965 None:intergenic 45.0%
ATGGTTCCACCAAGATTGTG+AGG - chr3_1:11417955-11417974 Msa0348640:CDS 45.0%
GAATGCTCTCACAATGCAGA+TGG - chr3_1:11418020-11418039 Msa0348640:CDS 45.0%
TACCCAGCAGAATGAAACCA+AGG - chr3_1:11418061-11418080 Msa0348640:CDS 45.0%
GTCCTTGGTTTCATTCTGCT+GGG + chr3_1:11418066-11418085 None:intergenic 45.0%
! GCCTCCTGATTTTTCTCCTT+AGG + chr3_1:11418095-11418114 None:intergenic 45.0%
GGCGGAAAACAATGAAGTGA+AGG - chr3_1:11418112-11418131 Msa0348640:CDS 45.0%
!! CGTCATTGGTTTCATTCTGC+TGG + chr3_1:11418151-11418170 None:intergenic 45.0%
AACCAATGACGAACCACCTA+AGG - chr3_1:11418160-11418179 Msa0348640:CDS 45.0%
! GCCTCCTGATTTTTCTCCTT+AGG + chr3_1:11418095-11418114 None:intergenic 45.0%
GGCGGAAAACAATGAAGTGA+AGG - chr3_1:11418112-11418131 Msa0348640:CDS 45.0%
TACCCAGCAGAATGAAACCA+AGG - chr3_1:11418061-11418080 Msa0348640:CDS 45.0%
GTCCTTGGTTTCATTCTGCT+GGG + chr3_1:11418066-11418085 None:intergenic 45.0%
! GCCTCCTGATTTTTCTCCTT+AGG + chr3_1:11418095-11418114 None:intergenic 45.0%
GGCGGAAAACAATGAAGTGA+AGG - chr3_1:11418112-11418131 Msa0348640:CDS 45.0%
CAAAAACAAGCCAAATGGCG+CGG - chr3_1:11418460-11418479 Msa0348640:CDS 45.0%
!! ACACGATAGCGGAAACAATC+AGG + chr3_1:11418560-11418579 None:intergenic 45.0%
TTGTTTCCGCTATCGTGTCA+TGG - chr3_1:11418562-11418581 Msa0348640:intron 45.0%
TGTTTCCGCTATCGTGTCAT+GGG - chr3_1:11418563-11418582 Msa0348640:intron 45.0%
AAACACCCATGACACGATAG+CGG + chr3_1:11418571-11418590 None:intergenic 45.0%
GATGTTCTACGAATCAAGCC+TGG - chr3_1:11418608-11418627 Msa0348640:intron 45.0%
GCTGCTATATGGGGTTTACA+AGG - chr3_1:11418664-11418683 Msa0348640:CDS 45.0%
TACAAGGCTTCATCTTCTGG+TGG - chr3_1:11418680-11418699 Msa0348640:CDS 45.0%
AAACTTGCCACCAAAAGCTC+GGG + chr3_1:11418720-11418739 None:intergenic 45.0%
GAAACTTGCCACCAAAAGCT+CGG + chr3_1:11418721-11418740 None:intergenic 45.0%
ATAGCTGACAACTTCAGGTG+CGG - chr3_1:11418814-11418833 Msa0348640:CDS 45.0%
TTCTGATTCTTTCCCGCTAC+CGG - chr3_1:11418848-11418867 Msa0348640:CDS 45.0%
TGAAAATGCTTTCCGGTAGC+GGG + chr3_1:11418863-11418882 None:intergenic 45.0%
CAAATGTTCTGCTCCAGGTT+AGG - chr3_1:11419010-11419029 Msa0348640:CDS 45.0%
AATTCAAGAAAGGGAGGCTC+CGG - chr3_1:11419110-11419129 Msa0348640:CDS 45.0%
ATCACGGCACAATTTGCACA+GGG - chr3_1:11419146-11419165 Msa0348640:CDS 45.0%
AGATTATGAACACCGTCTCG+TGG - chr3_1:11419311-11419330 Msa0348640:CDS 45.0%
CATGAACGGGAACATTGCTT+TGG + chr3_1:11419347-11419366 None:intergenic 45.0%
! GAGTATAGCTCTGCTGTTCA+CGG + chr3_1:11419407-11419426 None:intergenic 45.0%
CTTGGCTCCTTTAAGTAGAG+AGG - chr3_1:11419494-11419513 Msa0348640:CDS 45.0%
CCTTCGAAAGTTATCAGTCC+CGG + chr3_1:11419562-11419581 None:intergenic 45.0%
GGAGAGAGATCGTTGAAGAT+AGG - chr3_1:11419580-11419599 Msa0348640:CDS 45.0%
ACCATCAAGTGCAGCCATAT+CGG - chr3_1:11419643-11419662 Msa0348640:CDS 45.0%
GTCAGCGACGAGAATATGAA+GGG + chr3_1:11419725-11419744 None:intergenic 45.0%
AGTCAGCGACGAGAATATGA+AGG + chr3_1:11419726-11419745 None:intergenic 45.0%
GTCAAAAGGAAGACATGCCA+AGG + chr3_1:11419768-11419787 None:intergenic 45.0%
GGATCAGGAAGAGACCAAGA+TGG - chr3_1:11417545-11417564 Msa0348640:three_prime_UTR 50.0%
GGATCAAGAAGAGTCCAGAG+TGG - chr3_1:11417584-11417603 Msa0348640:three_prime_UTR 50.0%
AGTGGCCACTGAGCATAACA+TGG - chr3_1:11417602-11417621 Msa0348640:three_prime_UTR 50.0%
ACTCTTCCACCTGAAGGATC+TGG - chr3_1:11417834-11417853 Msa0348640:CDS 50.0%
GGTTTACCAGATCCTTCAGG+TGG + chr3_1:11417843-11417862 None:intergenic 50.0%
CGTCCTTGGTTTCATTCTGC+TGG + chr3_1:11418067-11418086 None:intergenic 50.0%
AACCAAGGACGAACCACCTA+AGG - chr3_1:11418076-11418095 Msa0348640:CDS 50.0%
CTCCTTAGGTGGTTCGTCAT+TGG + chr3_1:11418165-11418184 None:intergenic 50.0%
CGTCCTTGGTTTCATTCTGC+TGG + chr3_1:11418067-11418086 None:intergenic 50.0%
AACCAAGGACGAACCACCTA+AGG - chr3_1:11418076-11418095 Msa0348640:CDS 50.0%
! AGACTCTTTTCCGCGCCATT+TGG + chr3_1:11418473-11418492 None:intergenic 50.0%
! AAGCTTGAACCCCGAGCTTT+TGG - chr3_1:11418707-11418726 Msa0348640:CDS 50.0%
AACTTGCCACCAAAAGCTCG+GGG + chr3_1:11418719-11418738 None:intergenic 50.0%
AATACGAGAGTAACCTGGGC+AGG + chr3_1:11418743-11418762 None:intergenic 50.0%
GTCTAGTGAGCTTCCTAACC+TGG + chr3_1:11419026-11419045 None:intergenic 50.0%
ACTAGACTCTTCCGACCAGT+TGG - chr3_1:11419039-11419058 Msa0348640:CDS 50.0%
CTGAATGAGCTCCAACTGGT+CGG + chr3_1:11419053-11419072 None:intergenic 50.0%
ACTGCTGAATGAGCTCCAAC+TGG + chr3_1:11419057-11419076 None:intergenic 50.0%
ATTCAAGAAAGGGAGGCTCC+GGG - chr3_1:11419111-11419130 Msa0348640:CDS 50.0%
GATCACGGCACAATTTGCAC+AGG - chr3_1:11419145-11419164 Msa0348640:CDS 50.0%
TTGCACAGGGAAAGAGCTGT+TGG - chr3_1:11419159-11419178 Msa0348640:CDS 50.0%
!! ACATCAACTTGAGCGTCGAG+AGG - chr3_1:11419182-11419201 Msa0348640:CDS 50.0%
!! GGAACATTGCTTTGGTAGCG+AGG + chr3_1:11419339-11419358 None:intergenic 50.0%
GCGATGGCCTCTCTACTTAA+AGG + chr3_1:11419504-11419523 None:intergenic 50.0%
CTCCCAGCTCGTATTTGGTT+GGG - chr3_1:11419523-11419542 Msa0348640:CDS 50.0%
TCCCAGCTCGTATTTGGTTG+GGG - chr3_1:11419524-11419543 Msa0348640:CDS 50.0%
! GTTGGGGGAAGACCATTTTC+CGG - chr3_1:11419540-11419559 Msa0348640:CDS 50.0%
! TTGGGGGAAGACCATTTTCC+GGG - chr3_1:11419541-11419560 Msa0348640:CDS 50.0%
CCGGGACTGATAACTTTCGA+AGG - chr3_1:11419559-11419578 Msa0348640:CDS 50.0%
! GGCTGCACTTGATGGTAATC+AGG + chr3_1:11419639-11419658 None:intergenic 50.0%
CCATCAAGTGCAGCCATATC+GGG - chr3_1:11419644-11419663 Msa0348640:CDS 50.0%
CATCAAGTGCAGCCATATCG+GGG - chr3_1:11419645-11419664 Msa0348640:CDS 50.0%
TCCAACTTGTCTCCCCGATA+TGG + chr3_1:11419660-11419679 None:intergenic 50.0%
GTTATGCTCAGTGGCCACTC+TGG + chr3_1:11417601-11417620 None:intergenic 55.0%
CTCCTTAGGTGGTTCGTCCT+TGG + chr3_1:11418081-11418100 None:intergenic 55.0%
CTCCTTAGGTGGTTCGTCCT+TGG + chr3_1:11418081-11418100 None:intergenic 55.0%
! CTTGAACCCCGAGCTTTTGG+TGG - chr3_1:11418710-11418729 Msa0348640:CDS 55.0%
CAAATACGAGCTGGGAGCGA+TGG + chr3_1:11419520-11419539 None:intergenic 55.0%
CATCGCTCCCAGCTCGTATT+TGG - chr3_1:11419518-11419537 Msa0348640:CDS 55.0%
GCTCCCAGCTCGTATTTGGT+TGG - chr3_1:11419522-11419541 Msa0348640:CDS 55.0%
CCCCCAACCAAATACGAGCT+GGG + chr3_1:11419528-11419547 None:intergenic 55.0%
CCCAGCTCGTATTTGGTTGG+GGG - chr3_1:11419525-11419544 Msa0348640:CDS 55.0%
TCCCCCAACCAAATACGAGC+TGG + chr3_1:11419529-11419548 None:intergenic 55.0%
CCCGATATGGCTGCACTTGA+TGG + chr3_1:11419647-11419666 None:intergenic 55.0%
GCCATATCGGGGAGACAAGT+TGG - chr3_1:11419656-11419675 Msa0348640:CDS 55.0%
TGGTGGCAAGTTTCCTGCCC+AGG - chr3_1:11418727-11418746 Msa0348640:CDS 60.0%
AAGAAAGGGAGGCTCCGGGT+CGG - chr3_1:11419115-11419134 Msa0348640:CDS 60.0%
GGTAGCGAGGTTCCACGAGA+CGG + chr3_1:11419326-11419345 None:intergenic 60.0%
AGAAAGGGAGGCTCCGGGTC+GGG - chr3_1:11419116-11419135 Msa0348640:CDS 65.0%
CGTGATCCCCTGACCCGACC+CGG + chr3_1:11419132-11419151 None:intergenic 70.0%
CGGGTCGGGTCAGGGGATCA+CGG - chr3_1:11419130-11419149 Msa0348640:CDS 70.0%
GGAGGCTCCGGGTCGGGTCA+GGG - chr3_1:11419122-11419141 Msa0348640:CDS 75.0%
GAGGCTCCGGGTCGGGTCAG+GGG - chr3_1:11419123-11419142 Msa0348640:CDS 75.0%
! GGGAGGCTCCGGGTCGGGTC+AGG - chr3_1:11419121-11419140 Msa0348640:CDS 80.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 11417447 11419947 11417447 ID=Msa0348640;Name=Msa0348640
chr3_1 mRNA 11417447 11419947 11417447 ID=Msa0348640-mRNA-1;Parent=Msa0348640;Name=Msa0348640-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|1|0.66|1|1|1|3|204|711
chr3_1 exon 11417447 11418367 11417447 ID=Msa0348640-mRNA-1:exon:2993;Parent=Msa0348640-mRNA-1
chr3_1 exon 11418447 11418563 11418447 ID=Msa0348640-mRNA-1:exon:2992;Parent=Msa0348640-mRNA-1
chr3_1 exon 11418646 11419947 11418646 ID=Msa0348640-mRNA-1:exon:2991;Parent=Msa0348640-mRNA-1
chr3_1 CDS 11418646 11419947 11418646 ID=Msa0348640-mRNA-1:cds;Parent=Msa0348640-mRNA-1
chr3_1 CDS 11418447 11418563 11418447 ID=Msa0348640-mRNA-1:cds;Parent=Msa0348640-mRNA-1
chr3_1 CDS 11417651 11418367 11417651 ID=Msa0348640-mRNA-1:cds;Parent=Msa0348640-mRNA-1
chr3_1 three_prime_UTR 11417447 11417650 11417447 ID=Msa0348640-mRNA-1:three_prime_utr;Parent=Msa0348640-mRNA-1
Gene Sequence

>Msa0348640

ATGGGCACTGAGCATAACGTTGATCAAGAAGAGAGCAAATTGGACACGGAGCATAATTTGGATCAAGATGAGGCCAAGATTGGCACTGAGCATAATGTGGATCAGGAAGAGACCAAGATGGTCACTGAGCATAACATGGATCAAGAAGAGTCCAGAGTGGCCACTGAGCATAACATGGATCAAGAAGAGAACAAGATGGGCACTGAGAATAACTTGAATCAAGAAGAGAGCAGGATGGACACTGAGCATAACATCGATCAAGAAGAGAGTAGGATGGACACTGAGTATAACATTGATCAAGAGAGCAAGATGGGTACTGAGACTCATCCTGAATTTTCTTCTAATCCTAATCCTCAGTCATCAGAAAATGATGACAACAAGAAGGATACTCTTCCACCTGAAGGATCTGGTAAACCAGAGTTGAGTGAGAAGGTTACTCCACAATCATTGAAGGCAAAAAAAATTGTAAAGAAATCTCTGGTTCCTAAACTTAAGGCCAAGAAGAACAATGGTTCCACCAAGATTGTGAGGAAGAAAATAAAGAGGAAGAACAAAAAAGTAGGAGACAATGCTGAATGCTCTCACAATGCAGATGGGAAACTAATTTCAGGCAGTACCCAGCAGAATGAAACCAAGGACGAACCACCTAAGGAGAAAAATCAGGAGGCGGAAAACAATGAAGTGAAGGTAACAGGCAGTACCCAGCAGAATGAAACCAATGACGAACCACCTAAGGAGAAAAATCAGGAGGCGGAAAACAATGAAGTGAAGGTAACAGGCAGTACCCAGCAGAATGAAACCAAGGACGAACCACCTAAGGAGAAAAATCAGGAGGCGGAAAACAATGAAGTGAAGGTAAGTCAGAATAGGAGCAGTAATGACAAAAGTCCTATAGAGATGAGTCATCAGGATGAAAAAGATAAGGAGATCAATCTGTTGGATAAGACTGAACAAGAACAGAAGAGTGAAGAGAAGCAAAAGGAGTCAAATAAGGGTTCTAGGAGGAGAAAAAACAAAAACAAGCCAAATGGCGCGGAAAAGAGTCTATCAAATGACAAAAAGAGTGACAAGCTTGGTGGTCTCATTTTTATGTGCAGTGCTAAGACAAAGCCTGATTGTTTCCGCTATCGTGTCATGGGTGTTTCATCTGCTAAAAAGGATGATGTTCTACGAATCAAGCCTGGACTTACGCTCTTTCTTTATGATTTTGATCTGAAGCTGCTATATGGGGTTTACAAGGCTTCATCTTCTGGTGGCTTGAAGCTTGAACCCCGAGCTTTTGGTGGCAAGTTTCCTGCCCAGGTGCGGTTTAATATTGTTTCTGATTCTTTCCCGCTACCGGAAAGCATTTTCAAAAAGGCTATCAAGGATAATTATAACGCAAAGAACAAGTTCAAACCAGAACTTACTGTTGCACAAGTTAGGAAGCTCACTAGACTCTTCCGACCAGTTGGAGCTCATTCAGCAGTGCAGCAGCCTGTTTTTTCTCATCCAAAAGCAATAATTCAAGAAAGGGAGGCTCCGGGTCGGGTCAGGGGATCACGGCACAATTTGCACAGGGAAAGAGCTGTTGGACATCAACTTGAGCGTCGAGAGGATATTCCCCGTGATTCATTTCTTTTGGAGAATAATTATCGAGCTTATGATCGAAGGAATGTGGCTGCTACTTCTCATGTTAATCCTATAAGGGAACCTTATGAGAGAGATTATGAACACCGTCTCGTGGAACCTCGCTACCAAAGCAATGTTCCCGTTCATGTTGAAAGTCTACGAAGGGATCCCATTTATTTGAATGACCGTGAACAGCAGAGCTATACTCGTGTTGTTGCTGACCATATAGATGATCGTTATGCCTATCGATATGGTGCTTCATCTAGGGATGCATACTTGGCTCCTTTAAGTAGAGAGGCCATCGCTCCCAGCTCGTATTTGGTTGGGGGAAGACCATTTTCCGGGACTGATAACTTTCGAAGGAGAGAGATCGTTGAAGATAGGCATTACTCAATATATTCTGCTGCTGATGCTTTACCTGATTACCATCAAGTGCAGCCATATCGGGGAGACAAGTTGGAAGCCTCACCTTTACGAGTTTCATCTCGTTACTCTTTTGCTGGCCCTTCATATTCTCGTCGCTGA
Protein sequence

>Msa0348640

MGTEHNVDQEESKLDTEHNLDQDEAKIGTEHNVDQEETKMVTEHNMDQEESRVATEHNMDQEENKMGTENNLNQEESRMDTEHNIDQEESRMDTEYNIDQESKMGTETHPEFSSNPNPQSSENDDNKKDTLPPEGSGKPELSEKVTPQSLKAKKIVKKSLVPKLKAKKNNGSTKIVRKKIKRKNKKVGDNAECSHNADGKLISGSTQQNETKDEPPKEKNQEAENNEVKVTGSTQQNETNDEPPKEKNQEAENNEVKVTGSTQQNETKDEPPKEKNQEAENNEVKVSQNRSSNDKSPIEMSHQDEKDKEINLLDKTEQEQKSEEKQKESNKGSRRRKNKNKPNGAEKSLSNDKKSDKLGGLIFMCSAKTKPDCFRYRVMGVSSAKKDDVLRIKPGLTLFLYDFDLKLLYGVYKASSSGGLKLEPRAFGGKFPAQVRFNIVSDSFPLPESIFKKAIKDNYNAKNKFKPELTVAQVRKLTRLFRPVGAHSAVQQPVFSHPKAIIQEREAPGRVRGSRHNLHRERAVGHQLERREDIPRDSFLLENNYRAYDRRNVAATSHVNPIREPYERDYEHRLVEPRYQSNVPVHVESLRRDPIYLNDREQQSYTRVVADHIDDRYAYRYGASSRDAYLAPLSREAIAPSSYLVGGRPFSGTDNFRRREIVEDRHYSIYSAADALPDYHQVQPYRGDKLEASPLRVSSRYSFAGPSYSRR*