Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0061220 | sp|Q8GUU2|RIE1_ARATH | 65.116 | 344 | 111 | 3 | 11 | 348 | 15 | 355 | 4.59e-159 | 452 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0061220 | A0A072VGQ3 | 97.436 | 351 | 8 | 1 | 1 | 351 | 1 | 350 | 0.0 | 712 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001830 | Msa0061220 | 0.826001 | 3.446204e-54 | -8.615850e-47 |
| Msa0002250 | Msa0061220 | 0.818322 | 2.082726e-52 | -8.615850e-47 |
| Msa0004480 | Msa0061220 | 0.811031 | 8.577942e-51 | -8.615850e-47 |
| Msa0012200 | Msa0061220 | 0.846317 | 2.343496e-59 | -8.615850e-47 |
| Msa0026630 | Msa0061220 | 0.841163 | 5.612827e-58 | -8.615850e-47 |
| Msa0032080 | Msa0061220 | 0.827013 | 1.978079e-54 | -8.615850e-47 |
| Msa0033840 | Msa0061220 | -0.817299 | 3.543907e-52 | -8.615850e-47 |
| Msa0043850 | Msa0061220 | 0.849821 | 2.527471e-60 | -8.615850e-47 |
| Msa0051960 | Msa0061220 | 0.834216 | 3.407546e-56 | -8.615850e-47 |
| Msa0052360 | Msa0061220 | 0.806257 | 8.982931e-50 | -8.615850e-47 |
| Msa0061220 | Msa0077370 | 0.846173 | 2.565470e-59 | -8.615850e-47 |
| Msa0061220 | Msa0082420 | 0.831978 | 1.228479e-55 | -8.615850e-47 |
| Msa0061220 | Msa0090380 | 0.831518 | 1.595022e-55 | -8.615850e-47 |
| Msa0061220 | Msa0090510 | 0.839163 | 1.867973e-57 | -8.615850e-47 |
| Msa0061220 | Msa0094710 | 0.843486 | 1.360717e-58 | -8.615850e-47 |
| Msa0061220 | Msa0097570 | 0.806517 | 7.916184e-50 | -8.615850e-47 |
| Msa0061220 | Msa0101960 | 0.846194 | 2.532050e-59 | -8.615850e-47 |
| Msa0061220 | Msa0108760 | 0.887606 | 1.230645e-72 | -8.615850e-47 |
| Msa0061220 | Msa0113370 | -0.809531 | 1.807329e-50 | -8.615850e-47 |
| Msa0061220 | Msa0114790 | 0.809067 | 2.272166e-50 | -8.615850e-47 |
| Msa0061220 | Msa0117520 | 0.842890 | 1.961682e-58 | -8.615850e-47 |
| Msa0061220 | Msa0124320 | 0.808637 | 2.808306e-50 | -8.615850e-47 |
| Msa0061220 | Msa0136630 | 0.810999 | 8.719031e-51 | -8.615850e-47 |
| Msa0061220 | Msa0137860 | 0.827735 | 1.327659e-54 | -8.615850e-47 |
| Msa0061220 | Msa0137980 | 0.836618 | 8.418062e-57 | -8.615850e-47 |
| Msa0061220 | Msa0138900 | 0.851684 | 7.561592e-61 | -8.615850e-47 |
| Msa0061220 | Msa0139670 | 0.833861 | 4.181626e-56 | -8.615850e-47 |
| Msa0061220 | Msa0148320 | 0.813734 | 2.203024e-51 | -8.615850e-47 |
| Msa0061220 | Msa0152560 | 0.803778 | 2.962899e-49 | -8.615850e-47 |
| Msa0061220 | Msa0160960 | 0.836535 | 8.841245e-57 | -8.615850e-47 |
| Msa0061220 | Msa0172080 | 0.815097 | 1.100789e-51 | -8.615850e-47 |
| Msa0061220 | Msa0176260 | 0.831984 | 1.224395e-55 | -8.615850e-47 |
| Msa0061220 | Msa0183910 | 0.828100 | 1.084872e-54 | -8.615850e-47 |
| Msa0061220 | Msa0187310 | 0.815599 | 8.512378e-52 | -8.615850e-47 |
| Msa0061220 | Msa0194920 | 0.800823 | 1.202604e-48 | -8.615850e-47 |
| Msa0061220 | Msa0198730 | 0.820690 | 6.004836e-53 | -8.615850e-47 |
| Msa0061220 | Msa0213430 | 0.806406 | 8.354718e-50 | -8.615850e-47 |
| Msa0061220 | Msa0220400 | -0.804791 | 1.823433e-49 | -8.615850e-47 |
| Msa0061220 | Msa0223200 | -0.801255 | 9.816288e-49 | -8.615850e-47 |
| Msa0061220 | Msa0224130 | 0.831199 | 1.911168e-55 | -8.615850e-47 |
| Msa0061220 | Msa0241480 | 0.845605 | 3.659340e-59 | -8.615850e-47 |
| Msa0061220 | Msa0264680 | 0.834605 | 2.721445e-56 | -8.615850e-47 |
| Msa0061220 | Msa0265270 | 0.828833 | 7.215467e-55 | -8.615850e-47 |
| Msa0061220 | Msa0276430 | 0.839098 | 1.941697e-57 | -8.615850e-47 |
| Msa0061220 | Msa0279430 | 0.827974 | 1.162746e-54 | -8.615850e-47 |
| Msa0061220 | Msa0287870 | 0.805259 | 1.455122e-49 | -8.615850e-47 |
| Msa0061220 | Msa0302730 | 0.841866 | 3.663547e-58 | -8.615850e-47 |
| Msa0061220 | Msa0302840 | 0.808555 | 2.924570e-50 | -8.615850e-47 |
| Msa0061220 | Msa0316470 | 0.817933 | 2.550647e-52 | -8.615850e-47 |
| Msa0061220 | Msa0319020 | 0.841771 | 3.882539e-58 | -8.615850e-47 |
| Msa0061220 | Msa0331020 | 0.806626 | 7.508713e-50 | -8.615850e-47 |
| Msa0061220 | Msa0348640 | 0.817342 | 3.465001e-52 | -8.615850e-47 |
| Msa0061220 | Msa0365950 | 0.808111 | 3.635650e-50 | -8.615850e-47 |
| Msa0061220 | Msa0380600 | 0.805827 | 1.106354e-49 | -8.615850e-47 |
| Msa0061220 | Msa0388730 | 0.858293 | 9.099034e-63 | -8.615850e-47 |
| Msa0061220 | Msa0389210 | 0.833447 | 5.306931e-56 | -8.615850e-47 |
| Msa0061220 | Msa0389900 | 0.837851 | 4.073566e-57 | -8.615850e-47 |
| Msa0061220 | Msa0403470 | -0.821827 | 3.282873e-53 | -8.615850e-47 |
| Msa0061220 | Msa0403770 | 0.801949 | 7.073558e-49 | -8.615850e-47 |
| Msa0061220 | Msa0428200 | 0.801166 | 1.023746e-48 | -8.615850e-47 |
| Msa0061220 | Msa0430240 | 0.803689 | 3.091961e-49 | -8.615850e-47 |
| Msa0061220 | Msa0431900 | 0.801088 | 1.061634e-48 | -8.615850e-47 |
| Msa0061220 | Msa0484800 | 0.804884 | 1.743734e-49 | -8.615850e-47 |
| Msa0061220 | Msa0490320 | 0.806302 | 8.786009e-50 | -8.615850e-47 |
| Msa0061220 | Msa0519160 | 0.802852 | 4.608827e-49 | -8.615850e-47 |
| Msa0061220 | Msa0527540 | 0.807444 | 5.038826e-50 | -8.615850e-47 |
| Msa0061220 | Msa0529000 | 0.848082 | 7.686240e-60 | -8.615850e-47 |
| Msa0061220 | Msa0530730 | 0.833979 | 3.906826e-56 | -8.615850e-47 |
| Msa0061220 | Msa0532230 | 0.806455 | 8.159760e-50 | -8.615850e-47 |
| Msa0061220 | Msa0545050 | 0.881484 | 2.310299e-70 | -8.615850e-47 |
| Msa0061220 | Msa0558390 | 0.804891 | 1.737795e-49 | -8.615850e-47 |
| Msa0061220 | Msa0567370 | 0.829845 | 4.097525e-55 | -8.615850e-47 |
| Msa0061220 | Msa0567480 | 0.808167 | 3.538510e-50 | -8.615850e-47 |
| Msa0061220 | Msa0567520 | 0.821476 | 3.957476e-53 | -8.615850e-47 |
| Msa0061220 | Msa0573890 | 0.803525 | 3.343574e-49 | -8.615850e-47 |
| Msa0061220 | Msa0574930 | 0.836612 | 8.452341e-57 | -8.615850e-47 |
| Msa0061220 | Msa0577490 | 0.819893 | 9.143617e-53 | -8.615850e-47 |
| Msa0061220 | Msa0581400 | 0.804604 | 1.994953e-49 | -8.615850e-47 |
| Msa0061220 | Msa0592330 | 0.851568 | 8.153362e-61 | -8.615850e-47 |
| Msa0061220 | Msa0600590 | 0.887344 | 1.549096e-72 | -8.615850e-47 |
| Msa0061220 | Msa0604290 | 0.805255 | 1.457776e-49 | -8.615850e-47 |
| Msa0061220 | Msa0610830 | 0.803570 | 3.272613e-49 | -8.615850e-47 |
| Msa0061220 | Msa0613150 | 0.810769 | 9.778374e-51 | -8.615850e-47 |
| Msa0061220 | Msa0613300 | 0.800300 | 1.537451e-48 | -8.615850e-47 |
| Msa0061220 | Msa0613340 | 0.834625 | 2.690293e-56 | -8.615850e-47 |
| Msa0061220 | Msa0613420 | 0.819518 | 1.113477e-52 | -8.615850e-47 |
| Msa0061220 | Msa0632420 | 0.828308 | 9.664975e-55 | -8.615850e-47 |
| Msa0061220 | Msa0635270 | 0.820239 | 7.617740e-53 | -8.615850e-47 |
| Msa0061220 | Msa0641130 | 0.886574 | 3.039478e-72 | -8.615850e-47 |
| Msa0061220 | Msa0651560 | 0.806771 | 6.998040e-50 | -8.615850e-47 |
| Msa0061220 | Msa0653880 | 0.810386 | 1.182543e-50 | -8.615850e-47 |
| Msa0061220 | Msa0657930 | -0.805832 | 1.103273e-49 | -8.615850e-47 |
| Msa0061220 | Msa0667030 | 0.807693 | 4.462555e-50 | -8.615850e-47 |
| Msa0061220 | Msa0679670 | 0.866575 | 2.578866e-65 | -8.615850e-47 |
| Msa0061220 | Msa0696100 | 0.812815 | 3.507077e-51 | -8.615850e-47 |
| Msa0061220 | Msa0698460 | 0.801811 | 7.550436e-49 | -8.615850e-47 |
| Msa0061220 | Msa0703810 | 0.839811 | 1.267474e-57 | -8.615850e-47 |
| Msa0061220 | Msa0709120 | 0.833478 | 5.211814e-56 | -8.615850e-47 |
| Msa0061220 | Msa0715670 | 0.839806 | 1.270843e-57 | -8.615850e-47 |
| Msa0061220 | Msa0734940 | 0.803310 | 3.705048e-49 | -8.615850e-47 |
| Msa0061220 | Msa0743870 | 0.828311 | 9.644989e-55 | -8.615850e-47 |
| Msa0061220 | Msa0744640 | 0.873720 | 1.181273e-67 | -8.615850e-47 |
| Msa0061220 | Msa0764070 | 0.825264 | 5.154786e-54 | -8.615850e-47 |
| Msa0061220 | Msa0775160 | 0.825402 | 4.779459e-54 | -8.615850e-47 |
| Msa0061220 | Msa0787790 | 0.832412 | 9.595524e-56 | -8.615850e-47 |
| Msa0061220 | Msa0796580 | -0.819082 | 1.399484e-52 | -8.615850e-47 |
| Msa0061220 | Msa0798450 | 0.810274 | 1.250656e-50 | -8.615850e-47 |
| Msa0061220 | Msa0812530 | 0.830083 | 3.585697e-55 | -8.615850e-47 |
| Msa0061220 | Msa0823540 | 0.810236 | 1.274606e-50 | -8.615850e-47 |
| Msa0061220 | Msa0824930 | 0.809949 | 1.469080e-50 | -8.615850e-47 |
| Msa0061220 | Msa0830030 | 0.814349 | 1.611787e-51 | -8.615850e-47 |
| Msa0061220 | Msa0833270 | 0.822176 | 2.725399e-53 | -8.615850e-47 |
| Msa0061220 | Msa0841730 | 0.874118 | 8.669499e-68 | -8.615850e-47 |
| Msa0061220 | Msa0843700 | 0.813739 | 2.198120e-51 | -8.615850e-47 |
| Msa0061220 | Msa0852790 | 0.821072 | 4.903191e-53 | -8.615850e-47 |
| Msa0061220 | Msa0862620 | 0.816723 | 4.774080e-52 | -8.615850e-47 |
| Msa0061220 | Msa0863720 | 0.820076 | 8.301948e-53 | -8.615850e-47 |
| Msa0061220 | Msa0863990 | 0.870770 | 1.135053e-66 | -8.615850e-47 |
| Msa0061220 | Msa0870510 | 0.860954 | 1.440217e-63 | -8.615850e-47 |
| Msa0061220 | Msa0881720 | 0.809786 | 1.593104e-50 | -8.615850e-47 |
| Msa0061220 | Msa0930740 | 0.817372 | 3.412250e-52 | -8.615850e-47 |
| Msa0061220 | Msa0945130 | 0.847570 | 1.063960e-59 | -8.615850e-47 |
| Msa0061220 | Msa0968470 | -0.814065 | 1.862708e-51 | -8.615850e-47 |
| Msa0061220 | Msa0982090 | -0.804655 | 1.946654e-49 | -8.615850e-47 |
| Msa0061220 | Msa1011250 | 0.845765 | 3.310606e-59 | -8.615850e-47 |
| Msa0061220 | Msa1016960 | 0.832333 | 1.003591e-55 | -8.615850e-47 |
| Msa0061220 | Msa1022030 | 0.820604 | 6.281303e-53 | -8.615850e-47 |
| Msa0061220 | Msa1023310 | 0.809091 | 2.246226e-50 | -8.615850e-47 |
| Msa0061220 | Msa1030810 | 0.808310 | 3.297316e-50 | -8.615850e-47 |
| Msa0061220 | Msa1031460 | 0.813300 | 2.744845e-51 | -8.615850e-47 |
| Msa0061220 | Msa1058200 | 0.826905 | 2.098681e-54 | -8.615850e-47 |
| Msa0061220 | Msa1059670 | 0.803120 | 4.055936e-49 | -8.615850e-47 |
| Msa0061220 | Msa1061740 | 0.824540 | 7.638972e-54 | -8.615850e-47 |
| Msa0061220 | Msa1062040 | 0.848426 | 6.175519e-60 | -8.615850e-47 |
| Msa0061220 | Msa1069340 | 0.841385 | 4.907380e-58 | -8.615850e-47 |
| Msa0061220 | Msa1069890 | 0.823116 | 1.646629e-53 | -8.615850e-47 |
| Msa0061220 | Msa1070540 | 0.834022 | 3.810008e-56 | -8.615850e-47 |
| Msa0061220 | Msa1089190 | 0.820119 | 8.116888e-53 | -8.615850e-47 |
| Msa0061220 | Msa1101240 | 0.831510 | 1.602351e-55 | -8.615850e-47 |
| Msa0061220 | Msa1102820 | 0.800143 | 1.655133e-48 | -8.615850e-47 |
| Msa0061220 | Msa1107200 | 0.841660 | 4.151611e-58 | -8.615850e-47 |
| Msa0061220 | Msa1109810 | 0.838944 | 2.127810e-57 | -8.615850e-47 |
| Msa0061220 | Msa1119920 | 0.810938 | 8.987567e-51 | -8.615850e-47 |
| Msa0061220 | Msa1128270 | 0.805320 | 1.413306e-49 | -8.615850e-47 |
| Msa0061220 | Msa1131430 | 0.808221 | 3.444431e-50 | -8.615850e-47 |
| Msa0061220 | Msa1147640 | 0.806833 | 6.788937e-50 | -8.615850e-47 |
| Msa0061220 | Msa1150780 | 0.846858 | 1.667789e-59 | -8.615850e-47 |
| Msa0061220 | Msa1158390 | 0.810181 | 1.309495e-50 | -8.615850e-47 |
| Msa0061220 | Msa1159170 | 0.819618 | 1.056340e-52 | -8.615850e-47 |
| Msa0061220 | Msa1160560 | 0.809961 | 1.460766e-50 | -8.615850e-47 |
| Msa0061220 | Msa1173150 | 0.800013 | 1.759031e-48 | -8.615850e-47 |
| Msa0061220 | Msa1180720 | 0.828026 | 1.129713e-54 | -8.615850e-47 |
| Msa0061220 | Msa1183140 | 0.804324 | 2.281939e-49 | -8.615850e-47 |
| Msa0061220 | Msa1188350 | 0.800412 | 1.458739e-48 | -8.615850e-47 |
| Msa0061220 | Msa1206270 | 0.807495 | 4.916335e-50 | -8.615850e-47 |
| Msa0061220 | Msa1208990 | 0.852267 | 5.163220e-61 | -8.615850e-47 |
| Msa0061220 | Msa1212050 | 0.812706 | 3.704489e-51 | -8.615850e-47 |
| Msa0061220 | Msa1212130 | 0.808102 | 3.652711e-50 | -8.615850e-47 |
| Msa0061220 | Msa1218160 | 0.848333 | 6.550953e-60 | -8.615850e-47 |
| Msa0061220 | Msa1221330 | 0.824798 | 6.640923e-54 | -8.615850e-47 |
| Msa0061220 | Msa1225580 | 0.835232 | 1.891206e-56 | -8.615850e-47 |
| Msa0061220 | Msa1229480 | 0.820535 | 6.517828e-53 | -8.615850e-47 |
| Msa0061220 | Msa1231710 | 0.814155 | 1.778818e-51 | -8.615850e-47 |
| Msa0061220 | Msa1234620 | 0.810849 | 9.392487e-51 | -8.615850e-47 |
| Msa0061220 | Msa1236440 | 0.821962 | 3.054271e-53 | -8.615850e-47 |
| Msa0061220 | Msa1238600 | 0.829433 | 5.161224e-55 | -8.615850e-47 |
| Msa0061220 | Msa1246780 | 0.804381 | 2.219776e-49 | -8.615850e-47 |
| Msa0061220 | Msa1256060 | 0.830406 | 2.989437e-55 | -8.615850e-47 |
| Msa0061220 | Msa1256810 | 0.802399 | 5.714813e-49 | -8.615850e-47 |
| Msa0061220 | Msa1259860 | 0.817983 | 2.485037e-52 | -8.615850e-47 |
| Msa0061220 | Msa1272010 | 0.809019 | 2.327254e-50 | -8.615850e-47 |
| Msa0061220 | Msa1277670 | 0.822917 | 1.832822e-53 | -8.615850e-47 |
| Msa0061220 | Msa1286210 | 0.818953 | 1.497498e-52 | -8.615850e-47 |
| Msa0061220 | Msa1296240 | 0.811337 | 7.363595e-51 | -8.615850e-47 |
| Msa0061220 | Msa1298390 | -0.815216 | 1.035786e-51 | -8.615850e-47 |
| Msa0061220 | Msa1306830 | 0.811942 | 5.439309e-51 | -8.615850e-47 |
| Msa0061220 | Msa1309760 | 0.805579 | 1.247242e-49 | -8.615850e-47 |
| Msa0061220 | Msa1312440 | 0.839562 | 1.471392e-57 | -8.615850e-47 |
| Msa0061220 | Msa1355510 | 0.834855 | 2.353938e-56 | -8.615850e-47 |
| Msa0061220 | Msa1364080 | 0.827438 | 1.564198e-54 | -8.615850e-47 |
| Msa0061220 | Msa1368610 | 0.800501 | 1.399156e-48 | -8.615850e-47 |
| Msa0061220 | Msa1369920 | -0.839794 | 1.280195e-57 | -8.615850e-47 |
| Msa0061220 | Msa1382380 | -0.806361 | 8.540631e-50 | -8.615850e-47 |
| Msa0061220 | Msa1386890 | 0.806001 | 1.016841e-49 | -8.615850e-47 |
| Msa0061220 | Msa1397390 | 0.807189 | 5.706740e-50 | -8.615850e-47 |
| Msa0061220 | Msa1407760 | 0.845166 | 4.809773e-59 | -8.615850e-47 |
| Msa0061220 | Msa1407880 | 0.839907 | 1.196464e-57 | -8.615850e-47 |
| Msa0061220 | Msa1419840 | 0.861511 | 9.746133e-64 | -8.615850e-47 |
| Msa0061220 | Msa1433410 | 0.834500 | 2.891977e-56 | -8.615850e-47 |
| Msa0061220 | Msa1437730 | 0.828713 | 7.713600e-55 | -8.615850e-47 |
| Msa0061220 | Msa1442920 | 0.816019 | 6.859643e-52 | -8.615850e-47 |
| Msa0061220 | Msa1443620 | 0.848129 | 7.462539e-60 | -8.615850e-47 |
| Msa0061220 | Msa1458680 | 0.801684 | 8.015714e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0061220 | MtrunA17_Chr1g0161291 | 97.436 | 351 | 8 | 1 | 1 | 351 | 1 | 350 | 0.0 | 712 |
| Msa0061220 | MtrunA17_Chr8g0391751 | 69.971 | 343 | 87 | 5 | 11 | 351 | 8 | 336 | 4.55e-171 | 479 |
| Msa0061220 | MtrunA17_Chr4g0057351 | 48.907 | 366 | 160 | 10 | 12 | 351 | 7 | 371 | 3.43e-113 | 333 |
| Msa0061220 | MtrunA17_Chr5g0397921 | 51.320 | 341 | 143 | 6 | 34 | 351 | 47 | 387 | 1.04e-101 | 305 |
| Msa0061220 | MtrunA17_Chr7g0246571 | 51.118 | 313 | 144 | 5 | 42 | 348 | 51 | 360 | 1.90e-90 | 275 |
| Msa0061220 | MtrunA17_Chr7g0255261 | 46.021 | 289 | 128 | 4 | 65 | 351 | 35 | 297 | 7.29e-79 | 243 |
| Msa0061220 | MtrunA17_Chr1g0148631 | 32.075 | 318 | 177 | 9 | 59 | 344 | 75 | 385 | 9.30e-41 | 147 |
| Msa0061220 | MtrunA17_Chr3g0138451 | 30.897 | 301 | 174 | 9 | 70 | 344 | 69 | 361 | 9.63e-39 | 142 |
| Msa0061220 | MtrunA17_Chr7g0255321 | 39.500 | 200 | 96 | 5 | 164 | 348 | 102 | 291 | 6.91e-36 | 132 |
| Msa0061220 | MtrunA17_Chr7g0255331 | 39.000 | 200 | 103 | 5 | 164 | 351 | 106 | 298 | 2.24e-33 | 125 |
| Msa0061220 | MtrunA17_Chr3g0102761 | 28.889 | 270 | 164 | 6 | 81 | 346 | 88 | 333 | 6.47e-30 | 117 |
| Msa0061220 | MtrunA17_Chr5g0446921 | 26.437 | 261 | 167 | 3 | 84 | 341 | 97 | 335 | 5.17e-22 | 95.5 |
| Msa0061220 | MtrunA17_Chr8g0388231 | 32.000 | 125 | 77 | 3 | 225 | 341 | 255 | 379 | 7.78e-12 | 65.9 |
| Msa0061220 | MtrunA17_Chr8g0388201 | 55.769 | 52 | 22 | 1 | 291 | 341 | 338 | 389 | 1.03e-11 | 65.5 |
| Msa0061220 | MtrunA17_Chr4g0065171 | 52.830 | 53 | 23 | 2 | 297 | 347 | 480 | 532 | 2.08e-11 | 65.1 |
| Msa0061220 | MtrunA17_Chr8g0369691 | 54.545 | 55 | 23 | 2 | 296 | 348 | 440 | 494 | 6.44e-11 | 63.5 |
| Msa0061220 | MtrunA17_Chr6g0461611 | 35.616 | 73 | 47 | 0 | 272 | 344 | 208 | 280 | 8.03e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0061220 | AT1G68070.1 | 67.836 | 342 | 94 | 5 | 12 | 350 | 14 | 342 | 1.23e-169 | 476 |
| Msa0061220 | AT2G01735.1 | 65.116 | 344 | 111 | 3 | 11 | 348 | 15 | 355 | 4.66e-160 | 452 |
| Msa0061220 | AT3G61180.1 | 51.445 | 346 | 141 | 6 | 28 | 351 | 39 | 379 | 1.07e-118 | 348 |
| Msa0061220 | AT4G11680.1 | 54.790 | 334 | 140 | 5 | 26 | 351 | 60 | 390 | 1.72e-109 | 325 |
| Msa0061220 | AT4G11680.2 | 50.413 | 363 | 140 | 6 | 26 | 351 | 60 | 419 | 3.99e-103 | 310 |
| Msa0061220 | AT2G01735.2 | 65.000 | 240 | 75 | 3 | 11 | 244 | 15 | 251 | 1.67e-102 | 302 |
| Msa0061220 | AT1G12760.1 | 51.558 | 353 | 137 | 7 | 27 | 348 | 52 | 401 | 7.77e-102 | 306 |
| Msa0061220 | AT1G12760.2 | 52.108 | 332 | 131 | 4 | 42 | 348 | 2 | 330 | 1.91e-101 | 303 |
| Msa0061220 | AT1G63170.1 | 51.603 | 343 | 138 | 5 | 32 | 348 | 33 | 373 | 6.03e-95 | 288 |
| Msa0061220 | AT4G32600.1 | 29.316 | 307 | 187 | 8 | 70 | 351 | 113 | 414 | 4.11e-41 | 150 |
| Msa0061220 | AT4G32600.2 | 29.316 | 307 | 187 | 8 | 70 | 351 | 113 | 414 | 4.11e-41 | 150 |
| Msa0061220 | AT1G80400.1 | 28.099 | 363 | 209 | 10 | 20 | 344 | 51 | 399 | 1.27e-40 | 147 |
| Msa0061220 | AT4G26580.1 | 27.037 | 270 | 156 | 7 | 81 | 344 | 99 | 333 | 2.84e-24 | 102 |
| Msa0061220 | AT4G26580.2 | 27.037 | 270 | 156 | 7 | 81 | 344 | 99 | 333 | 2.84e-24 | 102 |
| Msa0061220 | AT5G55970.2 | 27.138 | 269 | 161 | 6 | 81 | 344 | 103 | 341 | 4.47e-24 | 101 |
| Msa0061220 | AT5G55970.1 | 27.138 | 269 | 161 | 6 | 81 | 344 | 103 | 341 | 4.47e-24 | 101 |
| Msa0061220 | AT1G55530.3 | 28.846 | 104 | 72 | 1 | 241 | 344 | 133 | 234 | 6.50e-12 | 66.2 |
| Msa0061220 | AT1G55530.1 | 30.612 | 98 | 66 | 1 | 247 | 344 | 172 | 267 | 1.43e-11 | 65.5 |
| Msa0061220 | AT1G55530.2 | 30.612 | 98 | 66 | 1 | 247 | 344 | 172 | 267 | 1.43e-11 | 65.5 |
Find 118 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATATTCGAAATCTGTATTT+TGG | 0.183808 | 1_2:+19229080 | None:intergenic |
| GTTATCCAATTATGGATTAT+TGG | 0.213917 | 1_2:-19227892 | Msa0061220:three_prime_UTR |
| ATTCTTCATGCATAATAAAA+TGG | 0.229080 | 1_2:-19228177 | Msa0061220:CDS |
| TGCCATCTTCTGTGTTGTTT+TGG | 0.232051 | 1_2:-19229297 | Msa0061220:CDS |
| ATTTGAAAGTTATCCAATTA+TGG | 0.244965 | 1_2:-19227900 | Msa0061220:three_prime_UTR |
| GATCTATTTAGAGAAGATTT+AGG | 0.264849 | 1_2:-19227989 | Msa0061220:three_prime_UTR |
| GTATGCACTGGTGGTTTCTA+TGG | 0.288910 | 1_2:+19229013 | None:intergenic |
| CGATGTGAATCAATAAATAC+TGG | 0.291284 | 1_2:-19230237 | Msa0061220:CDS |
| GAACTCCAATAATCCATAAT+TGG | 0.294125 | 1_2:+19227887 | None:intergenic |
| GAACAGGTATAACACCTTAC+TGG | 0.359646 | 1_2:-19228100 | Msa0061220:exon |
| ACTTCCCTCGCTCAGCTTCT+CGG | 0.363663 | 1_2:-19232189 | Msa0061220:CDS |
| GCTATTCTCTATGCTGTTGC+GGG | 0.374371 | 1_2:-19229227 | Msa0061220:CDS |
| TTGAGTATCACCGCCGTAAT+CGG | 0.376851 | 1_2:-19231915 | Msa0061220:CDS |
| ATACTGGGGTTTCATTCCTT+TGG | 0.381940 | 1_2:-19230221 | Msa0061220:CDS |
| AAAATAATTGTTGTTGAATA+CGG | 0.383185 | 1_2:+19232478 | None:intergenic |
| CTGGGGTTTCATTCCTTTGG+TGG | 0.384225 | 1_2:-19230218 | Msa0061220:CDS |
| TCCGCGAATCCCTCCGATTA+CGG | 0.391692 | 1_2:+19231902 | None:intergenic |
| CGAAGAGCGTCGTGCCGATT+GGG | 0.393333 | 1_2:-19232106 | Msa0061220:CDS |
| GATGGTTGCAGGGAAGAGTA+TGG | 0.396930 | 1_2:+19228206 | None:intergenic |
| GGTTTCATTCCTTTGGTGGA+TGG | 0.399167 | 1_2:-19230214 | Msa0061220:CDS |
| TTCATTCCTTTGGTGGATGG+TGG | 0.402298 | 1_2:-19230211 | Msa0061220:CDS |
| ACACGTAAGTAACATATCTA+TGG | 0.403527 | 1_2:-19232545 | Msa0061220:five_prime_UTR |
| CGAACATGCCGATCCGCGTT+TGG | 0.419996 | 1_2:-19231987 | Msa0061220:CDS |
| TCTCTATGCTGTTGCGGGAC+AGG | 0.424869 | 1_2:-19229222 | Msa0061220:intron |
| CATGGCGTTCGTTGTGGTGT+CGG | 0.427563 | 1_2:-19232043 | Msa0061220:CDS |
| GTGAAGAGAGTGAAAGAAAA+CGG | 0.432102 | 1_2:+19232384 | None:intergenic |
| CAAACGCGGATCGGCATGTT+CGG | 0.442712 | 1_2:+19231988 | None:intergenic |
| GGGATTCGCGGAGGAGGCAG+AGG | 0.449417 | 1_2:-19231891 | Msa0061220:CDS |
| TCATTCCTTTGGTGGATGGT+GGG | 0.449593 | 1_2:-19230210 | Msa0061220:CDS |
| AGAATGGAAATGATGGTTGC+AGG | 0.452786 | 1_2:+19228195 | None:intergenic |
| GAATAAGTGATTATTTAAGA+AGG | 0.466555 | 1_2:+19232420 | None:intergenic |
| GAGAAGGATAGTGGTGGAGC+TGG | 0.468638 | 1_2:-19229047 | Msa0061220:CDS |
| AGCTCTACTCCATCTTCATA+TGG | 0.474255 | 1_2:+19228229 | None:intergenic |
| CAGCTTCTCGGACGCGCCAC+CGG | 0.476801 | 1_2:-19232177 | Msa0061220:CDS |
| ATTTATTGATTCACATCGCT+TGG | 0.476837 | 1_2:+19230242 | None:intergenic |
| TATTCTCAAGGGAAACGAAC+AGG | 0.479763 | 1_2:-19228116 | Msa0061220:CDS |
| ATCCGTCCTTGTACGCGAAA+CGG | 0.482991 | 1_2:-19232142 | Msa0061220:CDS |
| CATGAAGGCAACGGCGGTGG+CGG | 0.483078 | 1_2:-19232219 | Msa0061220:CDS |
| TAAGTGATTATTTAAGAAGG+AGG | 0.485043 | 1_2:+19232423 | None:intergenic |
| TGCTATTCTCTATGCTGTTG+CGG | 0.491315 | 1_2:-19229228 | Msa0061220:CDS |
| ATTATCAAAACTGAGCAAAT+CGG | 0.492185 | 1_2:+19228021 | None:intergenic |
| AACAATGAGGAGAAGGATAG+TGG | 0.493619 | 1_2:-19229056 | Msa0061220:CDS |
| CCGATCCGCGTTTGGATCGT+AGG | 0.496250 | 1_2:-19231979 | Msa0061220:CDS |
| TCGAAGAGCGTCGTGCCGAT+TGG | 0.496664 | 1_2:-19232107 | Msa0061220:CDS |
| TGCCAAAACAACACAGAAGA+TGG | 0.498684 | 1_2:+19229295 | None:intergenic |
| CATCATGAAGGCAACGGCGG+TGG | 0.503117 | 1_2:-19232222 | Msa0061220:CDS |
| AAGATGCTCCACGCTTGTAC+TGG | 0.503612 | 1_2:-19230149 | Msa0061220:intron |
| CGCCGTTTCGCGTACAAGGA+CGG | 0.504228 | 1_2:+19232140 | None:intergenic |
| GACGGATGGTCCTCTTCGTC+CGG | 0.505847 | 1_2:+19232158 | None:intergenic |
| GCTCGACATGTCGTGGAACA+TGG | 0.511175 | 1_2:-19232061 | Msa0061220:CDS |
| ATCGGAGGGATTCGCGGAGG+AGG | 0.513459 | 1_2:-19231897 | Msa0061220:CDS |
| GCGCCGCCGTTTCGCGTACA+AGG | 0.514353 | 1_2:+19232136 | None:intergenic |
| GCCGTAATCGGAGGGATTCG+CGG | 0.515119 | 1_2:-19231903 | Msa0061220:CDS |
| ACGTGAACTCGTCTCAATCC+AGG | 0.519765 | 1_2:-19231813 | Msa0061220:intron |
| TTGTAAGTACAATATTCTCA+AGG | 0.522566 | 1_2:-19228128 | Msa0061220:CDS |
| ATTTAATTAACATTTCAAAA+CGG | 0.523017 | 1_2:+19227848 | None:intergenic |
| GGAAATCATACCGCATCCTC+AGG | 0.524464 | 1_2:+19228966 | None:intergenic |
| GAGATTAATGCGTTGAAAGG+TGG | 0.524923 | 1_2:+19232445 | None:intergenic |
| GAAGCTGAGCGAGGGAAGTA+CGG | 0.525268 | 1_2:+19232193 | None:intergenic |
| ATAGAGAATAGCAATGATGC+AGG | 0.528520 | 1_2:+19229238 | None:intergenic |
| TTGTACATGTTGTCTTGGTG+TGG | 0.534657 | 1_2:-19231939 | Msa0061220:CDS |
| TAGTGGTGGAGCTGGATCAA+TGG | 0.540698 | 1_2:-19229039 | Msa0061220:CDS |
| CCTACGATCCAAACGCGGAT+CGG | 0.541806 | 1_2:+19231979 | None:intergenic |
| GACATGTCGAGCGCTACGAC+TGG | 0.542175 | 1_2:+19232072 | None:intergenic |
| AGTATCACCGCCGTAATCGG+AGG | 0.542558 | 1_2:-19231912 | Msa0061220:CDS |
| TGCCTCTGTCCATATGAAGA+TGG | 0.543393 | 1_2:-19228238 | Msa0061220:CDS |
| AGTTGCCATGTATGCACTGG+TGG | 0.544429 | 1_2:+19229004 | None:intergenic |
| AGCGTTGAAAACTCCCAGTA+AGG | 0.544987 | 1_2:+19228086 | None:intergenic |
| AGAAACCACCAGTGCATACA+TGG | 0.546021 | 1_2:-19229009 | Msa0061220:CDS |
| GCGTTGAAAGGTGGATGCTA+AGG | 0.550106 | 1_2:+19232454 | None:intergenic |
| AATATCAAACAATGAGGAGA+AGG | 0.552713 | 1_2:-19229063 | Msa0061220:CDS |
| AGAATATTGTACTTACAAAG+AGG | 0.557808 | 1_2:+19228133 | None:intergenic |
| TGTAAGTACAATATTCTCAA+GGG | 0.561290 | 1_2:-19228127 | Msa0061220:CDS |
| ACGGTGTGGTGATAACTGAT+AGG | 0.562805 | 1_2:+19232497 | None:intergenic |
| GAGCGGAGAAGCGGTGTTTG+TGG | 0.565856 | 1_2:+19232246 | None:intergenic |
| TTCAGTTGCCATGTATGCAC+TGG | 0.568260 | 1_2:+19229001 | None:intergenic |
| AACAGGTATAACACCTTACT+GGG | 0.571722 | 1_2:-19228099 | Msa0061220:exon |
| GAGGAGATTAATGCGTTGAA+AGG | 0.576462 | 1_2:+19232442 | None:intergenic |
| CGCTCACATCATGAAGGCAA+CGG | 0.578089 | 1_2:-19232228 | Msa0061220:CDS |
| TGCATGAAGAATGGAAATGA+TGG | 0.580086 | 1_2:+19228188 | None:intergenic |
| CGCGTCCGAGAAGCTGAGCG+AGG | 0.580325 | 1_2:+19232184 | None:intergenic |
| GGACGCGCCACCGGACGAAG+AGG | 0.583915 | 1_2:-19232168 | Msa0061220:CDS |
| TATGCACTGGTGGTTTCTAT+GGG | 0.584259 | 1_2:+19229014 | None:intergenic |
| TCGTAGCGCTCGACATGTCG+TGG | 0.586584 | 1_2:-19232068 | Msa0061220:CDS |
| TGGCTTCGAGTATCCCCAAT+CGG | 0.586699 | 1_2:+19232092 | None:intergenic |
| CTTCTCCGCTCACATCATGA+AGG | 0.590176 | 1_2:-19232234 | Msa0061220:CDS |
| GAAGAGCGTCGTGCCGATTG+GGG | 0.591052 | 1_2:-19232105 | Msa0061220:CDS |
| GGATGGTCCTCTTCGTCCGG+TGG | 0.596489 | 1_2:+19232161 | None:intergenic |
| GATGTGAATCAATAAATACT+GGG | 0.596572 | 1_2:-19230236 | Msa0061220:CDS |
| GAATGGAAATGATGGTTGCA+GGG | 0.597135 | 1_2:+19228196 | None:intergenic |
| GTATCACCGCCGTAATCGGA+GGG | 0.597390 | 1_2:-19231911 | Msa0061220:CDS |
| AGCGTGGAGCATCTTGCAGA+AGG | 0.597658 | 1_2:+19230157 | None:intergenic |
| GCGTCCGAGAAGCTGAGCGA+GGG | 0.602931 | 1_2:+19232185 | None:intergenic |
| TCATGATGTGAGCGGAGAAG+CGG | 0.615465 | 1_2:+19232237 | None:intergenic |
| GGCGTTCGTTGTGGTGTCGG+CGG | 0.616079 | 1_2:-19232040 | Msa0061220:CDS |
| CATGTTCGGATGCTCGTCAA+CGG | 0.617231 | 1_2:+19232002 | None:intergenic |
| CTTTCAAATGACTCTAGCAA+AGG | 0.618057 | 1_2:+19227914 | None:intergenic |
| GGATTCGCGGAGGAGGCAGA+GGG | 0.630882 | 1_2:-19231890 | Msa0061220:CDS |
| GTGGAACATGGCGTTCGTTG+TGG | 0.631302 | 1_2:-19232049 | Msa0061220:CDS |
| AAAAGCCCACCATCCACCAA+AGG | 0.634811 | 1_2:+19230205 | None:intergenic |
| GATGCTGAATTCAGTTCCGA+CGG | 0.635749 | 1_2:-19231862 | Msa0061220:CDS |
| GTTTCGCGTACAAGGACGGA+TGG | 0.639083 | 1_2:+19232144 | None:intergenic |
| GTCATCACTATCGTTACCGT+CGG | 0.642079 | 1_2:+19231846 | None:intergenic |
| CGTCCTTGTACGCGAAACGG+CGG | 0.650355 | 1_2:-19232139 | Msa0061220:CDS |
| CTCCATCTTCATATGGACAG+AGG | 0.658470 | 1_2:+19228236 | None:intergenic |
| AAAGCTTACCAGTACAAGCG+TGG | 0.660127 | 1_2:+19230141 | None:intergenic |
| AACGATAGTGATGACAGCGA+TGG | 0.663555 | 1_2:-19231838 | Msa0061220:CDS |
| GCGAATCCCTCCGATTACGG+CGG | 0.668033 | 1_2:+19231905 | None:intergenic |
| CGTTGCCTTCATGATGTGAG+CGG | 0.668534 | 1_2:+19232229 | None:intergenic |
| ATTTCGAATATCAAACAATG+AGG | 0.669915 | 1_2:-19229069 | Msa0061220:CDS |
| TAGAGAATAGCAATGATGCA+GGG | 0.670826 | 1_2:+19229239 | None:intergenic |
| AATGAGGAGAAGGATAGTGG+TGG | 0.671940 | 1_2:-19229053 | Msa0061220:CDS |
| ATGTGAATCAATAAATACTG+GGG | 0.688287 | 1_2:-19230235 | Msa0061220:CDS |
| TCACATCATGAAGGCAACGG+CGG | 0.699092 | 1_2:-19232225 | Msa0061220:CDS |
| CGTAACCTACGATCCAAACG+CGG | 0.712893 | 1_2:+19231974 | None:intergenic |
| TAATACTCAGTATAGTAACG+TGG | 0.736927 | 1_2:+19227943 | None:intergenic |
| GTAATCGGAGGGATTCGCGG+AGG | 0.737387 | 1_2:-19231900 | Msa0061220:CDS |
| AATTGTTGTTGAATACGGTG+TGG | 0.749377 | 1_2:+19232483 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATATAACATATAACAT+AGG | - | chr1_2:19228954-19228973 | Msa0061220:intron | 10.0% |
| !!! | TAATATATATTTGTTGATTT+TGG | - | chr1_2:19230423-19230442 | Msa0061220:intron | 10.0% |
| !!! | TATAAGAAGTTAAATTTTAA+AGG | - | chr1_2:19231763-19231782 | Msa0061220:intron | 10.0% |
| !!! | AAAATAATTGTTGTTGAATA+CGG | + | chr1_2:19227923-19227942 | None:intergenic | 15.0% |
| !! | AAATGCATAATTCAATTAAA+AGG | + | chr1_2:19230575-19230594 | None:intergenic | 15.0% |
| !!! | ATAAAAATTTTCTTGATCAA+AGG | - | chr1_2:19230737-19230756 | Msa0061220:intron | 15.0% |
| !! | ATTTATTTGAGAGATAAAAT+TGG | + | chr1_2:19230898-19230917 | None:intergenic | 15.0% |
| !!! | AATTTTATCTCTCAAATAAA+TGG | - | chr1_2:19230897-19230916 | Msa0061220:intron | 15.0% |
| !! | AAATAAATAGAACAATTAGA+AGG | + | chr1_2:19231247-19231266 | None:intergenic | 15.0% |
| !!! | AAATTTAACTTCTTATAACA+GGG | + | chr1_2:19231760-19231779 | None:intergenic | 15.0% |
| !!! | AAAATTTAACTTCTTATAAC+AGG | + | chr1_2:19231761-19231780 | None:intergenic | 15.0% |
| !!! | CATTATTTGAAACTTTTTTT+TGG | - | chr1_2:19231843-19231862 | Msa0061220:CDS | 15.0% |
| !! | GAATAAGTGATTATTTAAGA+AGG | + | chr1_2:19227981-19228000 | None:intergenic | 20.0% |
| !! | AATGCAGAATTAATATCATA+AGG | + | chr1_2:19228721-19228740 | None:intergenic | 20.0% |
| !! | TTTAGACTTTACAATGAATT+TGG | - | chr1_2:19228912-19228931 | Msa0061220:intron | 20.0% |
| !! | TTAGACTTTACAATGAATTT+GGG | - | chr1_2:19228913-19228932 | Msa0061220:intron | 20.0% |
| !! | TAATATATATTACGTAGCTA+TGG | + | chr1_2:19229443-19229462 | None:intergenic | 20.0% |
| !! | TGTGTAATGTAAATATAAGT+TGG | - | chr1_2:19229465-19229484 | Msa0061220:intron | 20.0% |
| !! | TCAGTTCTTGATATAAAAAA+TGG | + | chr1_2:19229520-19229539 | None:intergenic | 20.0% |
| !! | TATGTAGTGTAAAAAATTCA+TGG | + | chr1_2:19229792-19229811 | None:intergenic | 20.0% |
| !!! | AGATTTGTAGATACTTATTT+TGG | - | chr1_2:19230114-19230133 | Msa0061220:intron | 20.0% |
| !!! | TCTAAAACAAACAATTCAAA+AGG | + | chr1_2:19230479-19230498 | None:intergenic | 20.0% |
| !! | ACTTGAAATACAAGTATATA+AGG | + | chr1_2:19230610-19230629 | None:intergenic | 20.0% |
| !! | TATTTATAGATGACCAAAAT+GGG | - | chr1_2:19230942-19230961 | Msa0061220:intron | 20.0% |
| !! | GGTATGAATAAAAAATAGTT+TGG | - | chr1_2:19231197-19231216 | Msa0061220:intron | 20.0% |
| !!! | ATTTCATTTTGAGTGAATAT+AGG | - | chr1_2:19231263-19231282 | Msa0061220:intron | 20.0% |
| !! | GTGACTAAAATATAAAATCA+GGG | + | chr1_2:19231544-19231563 | None:intergenic | 20.0% |
| !! | AGTGACTAAAATATAAAATC+AGG | + | chr1_2:19231545-19231564 | None:intergenic | 20.0% |
| !!! | CACAAATTTCTAAAATATCA+AGG | + | chr1_2:19231667-19231686 | None:intergenic | 20.0% |
| !!! | AATTTGAGTTAAACAAACAA+CGG | - | chr1_2:19231707-19231726 | Msa0061220:intron | 20.0% |
| !! | TTTCAAATAATGCAATCAAT+TGG | + | chr1_2:19231835-19231854 | None:intergenic | 20.0% |
| !! | ATGCATGTTAAAAGAAAAAA+GGG | - | chr1_2:19231924-19231943 | Msa0061220:CDS | 20.0% |
| !! | AGTTTCTTCTAAATATTTCT+TGG | - | chr1_2:19232004-19232023 | Msa0061220:CDS | 20.0% |
| !!! | ATTTTATTATGCATGAAGAA+TGG | + | chr1_2:19232222-19232241 | None:intergenic | 20.0% |
| !! | ATTCTTCATGCATAATAAAA+TGG | - | chr1_2:19232221-19232240 | Msa0061220:CDS | 20.0% |
| !! | ATTTGAAAGTTATCCAATTA+TGG | - | chr1_2:19232498-19232517 | Msa0061220:five_prime_UTR | 20.0% |
| ! | TAAGTGATTATTTAAGAAGG+AGG | + | chr1_2:19227978-19227997 | None:intergenic | 25.0% |
| ! | AAAATCGAATATAATTCACC+TGG | + | chr1_2:19228606-19228625 | None:intergenic | 25.0% |
| !!! | TCAATTTTTTTTTGCATGCT+AGG | - | chr1_2:19228657-19228676 | Msa0061220:intron | 25.0% |
| !!! | CAATTTTTTTTTGCATGCTA+GGG | - | chr1_2:19228658-19228677 | Msa0061220:intron | 25.0% |
| ! | CAATCAATCTCATTAAAACT+TGG | + | chr1_2:19228864-19228883 | None:intergenic | 25.0% |
| ! | TAGACTTTACAATGAATTTG+GGG | - | chr1_2:19228914-19228933 | Msa0061220:intron | 25.0% |
| ! | AAAGAAAAGTGAACAAAAGT+GGG | - | chr1_2:19229087-19229106 | Msa0061220:CDS | 25.0% |
| !!! | TTTGTTTTTAAGGGCATTTT+TGG | - | chr1_2:19229325-19229344 | Msa0061220:CDS | 25.0% |
| !! | TTTTGTGCAATTATTCAATG+TGG | - | chr1_2:19229570-19229589 | Msa0061220:intron | 25.0% |
| ! | TCCTGATATTTAAATAAACC+TGG | - | chr1_2:19229704-19229723 | Msa0061220:intron | 25.0% |
| ! | ACCAGGTTTATTTAAATATC+AGG | + | chr1_2:19229708-19229727 | None:intergenic | 25.0% |
| ! | TGATATTTAAATAAACCTGG+TGG | - | chr1_2:19229707-19229726 | Msa0061220:intron | 25.0% |
| ! | GATGTGAATCAATAAATACT+GGG | - | chr1_2:19230162-19230181 | Msa0061220:CDS | 25.0% |
| ! | ATGTGAATCAATAAATACTG+GGG | - | chr1_2:19230163-19230182 | Msa0061220:CDS | 25.0% |
| !!! | AGAATATTTGCTATTTGTAC+CGG | - | chr1_2:19230366-19230385 | Msa0061220:intron | 25.0% |
| !!! | TATATTTGTTGATTTTGGAG+TGG | - | chr1_2:19230428-19230447 | Msa0061220:intron | 25.0% |
| !!! | AATTGTTTGTTTTAGAGAGA+CGG | - | chr1_2:19230483-19230502 | Msa0061220:intron | 25.0% |
| ! | TATCCTCTCTTATAAACAAA+GGG | + | chr1_2:19230523-19230542 | None:intergenic | 25.0% |
| ! | ACGAATTTGAAAAATCATCT+TGG | + | chr1_2:19230685-19230704 | None:intergenic | 25.0% |
| !!! | TCGTAAATTTCAAAAGTACT+AGG | - | chr1_2:19230701-19230720 | Msa0061220:intron | 25.0% |
| !!! | CGTAAATTTCAAAAGTACTA+GGG | - | chr1_2:19230702-19230721 | Msa0061220:intron | 25.0% |
| ! | GTATTTATAGATGACCAAAA+TGG | - | chr1_2:19230941-19230960 | Msa0061220:intron | 25.0% |
| !!! | GTAGTTACTCAATTTTTTCT+AGG | - | chr1_2:19230964-19230983 | Msa0061220:intron | 25.0% |
| !!! | ACTTGTTTTTGAATCTTTAC+AGG | - | chr1_2:19231043-19231062 | Msa0061220:intron | 25.0% |
| !! | GATATTCGAAATCTGTATTT+TGG | + | chr1_2:19231321-19231340 | None:intergenic | 25.0% |
| ! | ATTTCGAATATCAAACAATG+AGG | - | chr1_2:19231329-19231348 | Msa0061220:intron | 25.0% |
| ! | ACTGAAATAAATTGTGTTTC+AGG | + | chr1_2:19231456-19231475 | None:intergenic | 25.0% |
| ! | AATGGAAATCAATTGTTCAA+TGG | - | chr1_2:19231507-19231526 | Msa0061220:intron | 25.0% |
| ! | TTATAACAGGGATACAAAAA+GGG | + | chr1_2:19231748-19231767 | None:intergenic | 25.0% |
| !!! | TAAATTTTAAAGGCACAAAG+AGG | - | chr1_2:19231773-19231792 | Msa0061220:intron | 25.0% |
| !! | TTCTTTTAGTACTAAAGGAT+GGG | - | chr1_2:19231881-19231900 | Msa0061220:CDS | 25.0% |
| ! | GATGCATGTTAAAAGAAAAA+AGG | - | chr1_2:19231923-19231942 | Msa0061220:CDS | 25.0% |
| ! | GTCTATTAAGATTATGTTGA+TGG | - | chr1_2:19231972-19231991 | Msa0061220:CDS | 25.0% |
| ! | TTCTAAATATTTCTTGGAAG+AGG | - | chr1_2:19232010-19232029 | Msa0061220:CDS | 25.0% |
| !!! | AAAATTGTAAGTTGGTTTCT+GGG | + | chr1_2:19232087-19232106 | None:intergenic | 25.0% |
| !! | AAACTCTGAAAATTGTAAGT+TGG | + | chr1_2:19232095-19232114 | None:intergenic | 25.0% |
| ! | AGAATATTGTACTTACAAAG+AGG | + | chr1_2:19232268-19232287 | None:intergenic | 25.0% |
| ! | TTGTAAGTACAATATTCTCA+AGG | - | chr1_2:19232270-19232289 | Msa0061220:CDS | 25.0% |
| ! | TGTAAGTACAATATTCTCAA+GGG | - | chr1_2:19232271-19232290 | Msa0061220:CDS | 25.0% |
| ! | ATTATCAAAACTGAGCAAAT+CGG | + | chr1_2:19232380-19232399 | None:intergenic | 25.0% |
| ! | GATCTATTTAGAGAAGATTT+AGG | - | chr1_2:19232409-19232428 | Msa0061220:five_prime_UTR | 25.0% |
| !! | GTTATCCAATTATGGATTAT+TGG | - | chr1_2:19232506-19232525 | Msa0061220:five_prime_UTR | 25.0% |
| ACACGTAAGTAACATATCTA+TGG | - | chr1_2:19227853-19227872 | Msa0061220:three_prime_UTR | 30.0% | |
| GAAAGAAAAGTGAACAAAAG+TGG | - | chr1_2:19229086-19229105 | Msa0061220:CDS | 30.0% | |
| ! | ATTCTAAGGGTTTCAAATGA+AGG | + | chr1_2:19229290-19229309 | None:intergenic | 30.0% |
| TTAAAAACAAACGTTCCAGA+GGG | + | chr1_2:19229316-19229335 | None:intergenic | 30.0% | |
| !!! | TCTGGAACGTTTGTTTTTAA+GGG | - | chr1_2:19229316-19229335 | Msa0061220:CDS | 30.0% |
| !!! | TAAGGGCATTTTTGGATTTT+TGG | - | chr1_2:19229333-19229352 | Msa0061220:CDS | 30.0% |
| !!! | AAGGGCATTTTTGGATTTTT+GGG | - | chr1_2:19229334-19229353 | Msa0061220:CDS | 30.0% |
| ! | GTAAATATAAGTTGGCATTG+AGG | - | chr1_2:19229473-19229492 | Msa0061220:intron | 30.0% |
| TATTTAAATAAACCTGGTGG+AGG | - | chr1_2:19229710-19229729 | Msa0061220:intron | 30.0% | |
| TGCTAATGAAACTACAAGAT+AGG | + | chr1_2:19229878-19229897 | None:intergenic | 30.0% | |
| GTTTCATTAGCATTTGTGTA+TGG | - | chr1_2:19229886-19229905 | Msa0061220:intron | 30.0% | |
| TTAGCATTTGTGTATGGAAT+CGG | - | chr1_2:19229892-19229911 | Msa0061220:intron | 30.0% | |
| TAGCTGTATGTATAGATATG+TGG | - | chr1_2:19230046-19230065 | Msa0061220:intron | 30.0% | |
| TGTATGTATAGATATGTGGT+TGG | - | chr1_2:19230050-19230069 | Msa0061220:intron | 30.0% | |
| GTATGTATAGATATGTGGTT+GGG | - | chr1_2:19230051-19230070 | Msa0061220:intron | 30.0% | |
| !! | ATTTATTGATTCACATCGCT+TGG | + | chr1_2:19230159-19230178 | None:intergenic | 30.0% |
| CGATGTGAATCAATAAATAC+TGG | - | chr1_2:19230161-19230180 | Msa0061220:CDS | 30.0% | |
| !! | TAAACAAAGGGTATTGAAGA+AGG | + | chr1_2:19230511-19230530 | None:intergenic | 30.0% |
| ! | ATACCCTTTGTTTATAAGAG+AGG | - | chr1_2:19230517-19230536 | Msa0061220:intron | 30.0% |
| GTATCCTCTCTTATAAACAA+AGG | + | chr1_2:19230524-19230543 | None:intergenic | 30.0% | |
| TTCTATTCTATTGTGGTAAG+TGG | + | chr1_2:19230662-19230681 | None:intergenic | 30.0% | |
| !! | ATCTTGGTTCTATTCTATTG+TGG | + | chr1_2:19230669-19230688 | None:intergenic | 30.0% |
| TATAAATGGACGACCAAAAT+TGG | + | chr1_2:19230763-19230782 | None:intergenic | 30.0% | |
| !!! | TTCTTTTTTAAGGACTGGTT+GGG | + | chr1_2:19230843-19230862 | None:intergenic | 30.0% |
| !!! | TCTTGTTCTTTTTTAAGGAC+TGG | + | chr1_2:19230848-19230867 | None:intergenic | 30.0% |
| !!! | CTCGATCTTGTTCTTTTTTA+AGG | + | chr1_2:19230853-19230872 | None:intergenic | 30.0% |
| ! | AATTGAGTAACTACCCATTT+TGG | + | chr1_2:19230958-19230977 | None:intergenic | 30.0% |
| TTTGTTGCTGTACTAATGAA+AGG | - | chr1_2:19231016-19231035 | Msa0061220:intron | 30.0% | |
| !! | CATTTTGAGTGAATATAGGA+AGG | - | chr1_2:19231267-19231286 | Msa0061220:intron | 30.0% |
| AATATCAAACAATGAGGAGA+AGG | - | chr1_2:19231335-19231354 | Msa0061220:intron | 30.0% | |
| ! | AATTGATCACTTCTGAGAAA+TGG | - | chr1_2:19231489-19231508 | Msa0061220:intron | 30.0% |
| AATTGTTCAATGGAAATCAG+TGG | - | chr1_2:19231517-19231536 | Msa0061220:intron | 30.0% | |
| CTTATAACAGGGATACAAAA+AGG | + | chr1_2:19231749-19231768 | None:intergenic | 30.0% | |
| ACAAAGAGGTTACAACTTTA+TGG | - | chr1_2:19231787-19231806 | Msa0061220:intron | 30.0% | |
| ! | GTCACTTCTTTTAGTACTAA+AGG | - | chr1_2:19231876-19231895 | Msa0061220:CDS | 30.0% |
| ! | CTTCTTTTAGTACTAAAGGA+TGG | - | chr1_2:19231880-19231899 | Msa0061220:CDS | 30.0% |
| CTAGCAAATAAACTGATAGT+AGG | - | chr1_2:19231948-19231967 | Msa0061220:CDS | 30.0% | |
| !!! | TATTTTTTCTAGAAGAGCTC+AGG | + | chr1_2:19232056-19232075 | None:intergenic | 30.0% |
| !! | GAAAATTGTAAGTTGGTTTC+TGG | + | chr1_2:19232088-19232107 | None:intergenic | 30.0% |
| !!! | TATTTGCTGTTTTGCATTTC+AGG | - | chr1_2:19232126-19232145 | Msa0061220:CDS | 30.0% |
| !! | GCTCAGTTTTGATAATTGTT+TGG | - | chr1_2:19232384-19232403 | Msa0061220:five_prime_UTR | 30.0% |
| TAATACTCAGTATAGTAACG+TGG | + | chr1_2:19232458-19232477 | None:intergenic | 30.0% | |
| GAACTCCAATAATCCATAAT+TGG | + | chr1_2:19232514-19232533 | None:intergenic | 30.0% | |
| ! | AATTGTTGTTGAATACGGTG+TGG | + | chr1_2:19227918-19227937 | None:intergenic | 35.0% |
| GTGAAGAGAGTGAAAGAAAA+CGG | + | chr1_2:19228017-19228036 | None:intergenic | 35.0% | |
| ! | GTGTTTTGTACATGTTGTCT+TGG | - | chr1_2:19228454-19228473 | Msa0061220:intron | 35.0% |
| ! | TCACGTTTTTCTTTCACTCT+CGG | + | chr1_2:19229007-19229026 | None:intergenic | 35.0% |
| AAAAACGTGAGAAGAGAAAG+TGG | - | chr1_2:19229017-19229036 | Msa0061220:CDS | 35.0% | |
| AAAACGTGAGAAGAGAAAGT+GGG | - | chr1_2:19229018-19229037 | Msa0061220:CDS | 35.0% | |
| TAAAAACAAACGTTCCAGAG+GGG | + | chr1_2:19229315-19229334 | None:intergenic | 35.0% | |
| CTTAAAAACAAACGTTCCAG+AGG | + | chr1_2:19229317-19229336 | None:intergenic | 35.0% | |
| !!! | CTCTGGAACGTTTGTTTTTA+AGG | - | chr1_2:19229315-19229334 | Msa0061220:CDS | 35.0% |
| !! | AGCTTGTCTTGTTTCTTTGA+GGG | - | chr1_2:19229415-19229434 | Msa0061220:intron | 35.0% |
| ATATAGTGCAAGTGATGCAA+TGG | + | chr1_2:19229655-19229674 | None:intergenic | 35.0% | |
| GTGTAAAAAATTCATGGTGC+AGG | + | chr1_2:19229786-19229805 | None:intergenic | 35.0% | |
| ATTAACATGCATTAGCAGCA+AGG | + | chr1_2:19230020-19230039 | None:intergenic | 35.0% | |
| ! | ATAGACACATGTGCATTTTC+AGG | + | chr1_2:19230403-19230422 | None:intergenic | 35.0% |
| CCACTAGTTGTTAAATATGC+AGG | + | chr1_2:19230546-19230565 | None:intergenic | 35.0% | |
| CCTGCATATTTAACAACTAG+TGG | - | chr1_2:19230543-19230562 | Msa0061220:intron | 35.0% | |
| ! | TCTTGATCAAAGGCCAATTT+TGG | - | chr1_2:19230747-19230766 | Msa0061220:intron | 35.0% |
| CCAAAAGATGCGGTTATAAA+TGG | + | chr1_2:19230777-19230796 | None:intergenic | 35.0% | |
| ! | CCATTTATAACCGCATCTTT+TGG | - | chr1_2:19230774-19230793 | Msa0061220:intron | 35.0% |
| CATACAGATGCGGTTATAAA+TGG | + | chr1_2:19230804-19230823 | None:intergenic | 35.0% | |
| CATTTATAACCGCATCTGTA+TGG | - | chr1_2:19230802-19230821 | Msa0061220:intron | 35.0% | |
| !!! | GTTCTTTTTTAAGGACTGGT+TGG | + | chr1_2:19230844-19230863 | None:intergenic | 35.0% |
| ACAAGATCGAGTCCATTAAT+TGG | - | chr1_2:19230862-19230881 | Msa0061220:intron | 35.0% | |
| AGTCCATTAATTGGTACCAA+AGG | - | chr1_2:19230871-19230890 | Msa0061220:intron | 35.0% | |
| GAGAGATAAAATTGGTCCTT+TGG | + | chr1_2:19230890-19230909 | None:intergenic | 35.0% | |
| ! | GTTTTTGAATCTTTACAGGC+TGG | - | chr1_2:19231047-19231066 | Msa0061220:intron | 35.0% |
| TAGAGAATAGCAATGATGCA+GGG | + | chr1_2:19231162-19231181 | None:intergenic | 35.0% | |
| ATAGAGAATAGCAATGATGC+AGG | + | chr1_2:19231163-19231182 | None:intergenic | 35.0% | |
| ! | TGAACGAATACTTTTACCTG+AGG | - | chr1_2:19231416-19231435 | Msa0061220:intron | 35.0% |
| ! | AATACTTTTACCTGAGGATG+CGG | - | chr1_2:19231422-19231441 | Msa0061220:intron | 35.0% |
| ! | TGTTTTCATGCATGTGAATC+TGG | - | chr1_2:19231586-19231605 | Msa0061220:intron | 35.0% |
| TTGAGTTAAACAAACAACGG+CGG | - | chr1_2:19231710-19231729 | Msa0061220:intron | 35.0% | |
| ! | TTTTAGTACTAAAGGATGGG+AGG | - | chr1_2:19231884-19231903 | Msa0061220:CDS | 35.0% |
| AGGAACTTTGTTGAAGATGT+AGG | - | chr1_2:19232030-19232049 | Msa0061220:CDS | 35.0% | |
| TGCATGAAGAATGGAAATGA+TGG | + | chr1_2:19232213-19232232 | None:intergenic | 35.0% | |
| AACAGGTATAACACCTTACT+GGG | - | chr1_2:19232299-19232318 | Msa0061220:five_prime_UTR | 35.0% | |
| CTTTCAAATGACTCTAGCAA+AGG | + | chr1_2:19232487-19232506 | None:intergenic | 35.0% | |
| GAGATTAATGCGTTGAAAGG+TGG | + | chr1_2:19227956-19227975 | None:intergenic | 40.0% | |
| GAGGAGATTAATGCGTTGAA+AGG | + | chr1_2:19227959-19227978 | None:intergenic | 40.0% | |
| TTGTACATGTTGTCTTGGTG+TGG | - | chr1_2:19228459-19228478 | Msa0061220:intron | 40.0% | |
| CGGGCTTTCTTACACAATAA+TGG | + | chr1_2:19228987-19229006 | None:intergenic | 40.0% | |
| ! | CACGTTTTTCTTTCACTCTC+GGG | + | chr1_2:19229006-19229025 | None:intergenic | 40.0% |
| AGAAAGTGGGCAAAAGAGAT+AGG | - | chr1_2:19229031-19229050 | Msa0061220:CDS | 40.0% | |
| GATTGGAAGACAATTAGTGC+TGG | - | chr1_2:19229142-19229161 | Msa0061220:intron | 40.0% | |
| GTTCACTAATGTAGGAAGCT+GGG | - | chr1_2:19229200-19229219 | Msa0061220:intron | 40.0% | |
| AATGAAGGATGTTCGCTGTT+TGG | + | chr1_2:19229275-19229294 | None:intergenic | 40.0% | |
| AAAAACAAACGTTCCAGAGG+GGG | + | chr1_2:19229314-19229333 | None:intergenic | 40.0% | |
| ! | ACGTGCTTTGAGTGCTATTA+CGG | - | chr1_2:19229382-19229401 | Msa0061220:intron | 40.0% |
| !! | GAGCTTGTCTTGTTTCTTTG+AGG | - | chr1_2:19229414-19229433 | Msa0061220:intron | 40.0% |
| !! | GCTTGTCTTGTTTCTTTGAG+GGG | - | chr1_2:19229416-19229435 | Msa0061220:intron | 40.0% |
| !! | CTTGTCTTGTTTCTTTGAGG+GGG | - | chr1_2:19229417-19229436 | Msa0061220:intron | 40.0% |
| ACTGCAAAAATGAATCCTGC+TGG | - | chr1_2:19229594-19229613 | Msa0061220:intron | 40.0% | |
| ATTTCACAACTGCTAGGTCT+TGG | + | chr1_2:19229628-19229647 | None:intergenic | 40.0% | |
| GGCAAAATTTCACAACTGCT+AGG | + | chr1_2:19229634-19229653 | None:intergenic | 40.0% | |
| ACATCGGATAATGTGAGGAA+TGG | + | chr1_2:19229931-19229950 | None:intergenic | 40.0% | |
| ATACTGGGGTTTCATTCCTT+TGG | - | chr1_2:19230177-19230196 | Msa0061220:CDS | 40.0% | |
| AAATGGACGACCAAAAGATG+CGG | + | chr1_2:19230787-19230806 | None:intergenic | 40.0% | |
| GGTCCTTTGGTACCAATTAA+TGG | + | chr1_2:19230877-19230896 | None:intergenic | 40.0% | |
| !!! | TGCCATCTTCTGTGTTGTTT+TGG | - | chr1_2:19231101-19231120 | Msa0061220:intron | 40.0% |
| TGCCAAAACAACACAGAAGA+TGG | + | chr1_2:19231106-19231125 | None:intergenic | 40.0% | |
| !!! | GTTGTTTTGGCATGCTTGAT+CGG | - | chr1_2:19231114-19231133 | Msa0061220:intron | 40.0% |
| TGCTATTCTCTATGCTGTTG+CGG | - | chr1_2:19231170-19231189 | Msa0061220:intron | 40.0% | |
| AACAATGAGGAGAAGGATAG+TGG | - | chr1_2:19231342-19231361 | Msa0061220:intron | 40.0% | |
| ! | TATGCACTGGTGGTTTCTAT+GGG | + | chr1_2:19231387-19231406 | None:intergenic | 40.0% |
| CATGTGAATCTGGTCATCAA+AGG | - | chr1_2:19231596-19231615 | Msa0061220:intron | 40.0% | |
| TGAGTTAAACAAACAACGGC+GGG | - | chr1_2:19231711-19231730 | Msa0061220:intron | 40.0% | |
| CAGGGATACAAAAAGGGAAA+AGG | + | chr1_2:19231742-19231761 | None:intergenic | 40.0% | |
| AGCTCTACTCCATCTTCATA+TGG | + | chr1_2:19232172-19232191 | None:intergenic | 40.0% | |
| GAATGGAAATGATGGTTGCA+GGG | + | chr1_2:19232205-19232224 | None:intergenic | 40.0% | |
| AGAATGGAAATGATGGTTGC+AGG | + | chr1_2:19232206-19232225 | None:intergenic | 40.0% | |
| TATTCTCAAGGGAAACGAAC+AGG | - | chr1_2:19232282-19232301 | Msa0061220:exon | 40.0% | |
| GAACAGGTATAACACCTTAC+TGG | - | chr1_2:19232298-19232317 | Msa0061220:five_prime_UTR | 40.0% | |
| ACGGTGTGGTGATAACTGAT+AGG | + | chr1_2:19227904-19227923 | None:intergenic | 45.0% | |
| TTGAGTATCACCGCCGTAAT+CGG | - | chr1_2:19228483-19228502 | Msa0061220:intron | 45.0% | |
| GATGCTGAATTCAGTTCCGA+CGG | - | chr1_2:19228536-19228555 | Msa0061220:intron | 45.0% | |
| GTCATCACTATCGTTACCGT+CGG | + | chr1_2:19228555-19228574 | None:intergenic | 45.0% | |
| AACGATAGTGATGACAGCGA+TGG | - | chr1_2:19228560-19228579 | Msa0061220:intron | 45.0% | |
| TGGGCAAAAGAGATAGGTAG+AGG | - | chr1_2:19229037-19229056 | Msa0061220:CDS | 45.0% | |
| GGGCAAAAGAGATAGGTAGA+GGG | - | chr1_2:19229038-19229057 | Msa0061220:CDS | 45.0% | |
| AACAAAAGTGGGCAGAAGAG+TGG | - | chr1_2:19229098-19229117 | Msa0061220:CDS | 45.0% | |
| ! | TGTCTTCCAATCGCCACTTT+GGG | + | chr1_2:19229134-19229153 | None:intergenic | 45.0% |
| TTGTCTTCCAATCGCCACTT+TGG | + | chr1_2:19229135-19229154 | None:intergenic | 45.0% | |
| GGTTCACTAATGTAGGAAGC+TGG | - | chr1_2:19229199-19229218 | Msa0061220:intron | 45.0% | |
| AAGCTGGGCTGTGTGAATTA+TGG | - | chr1_2:19229215-19229234 | Msa0061220:intron | 45.0% | |
| TTCCAGAGGGGGAATTCTAA+GGG | + | chr1_2:19229303-19229322 | None:intergenic | 45.0% | |
| ACTCAAAGCACGTGACAAGA+GGG | + | chr1_2:19229375-19229394 | None:intergenic | 45.0% | |
| ! | TTGAGTGCTATTACGGCTAG+TGG | - | chr1_2:19229389-19229408 | Msa0061220:intron | 45.0% |
| GCAGAGCTTCTCAATGATAG+GGG | + | chr1_2:19229744-19229763 | None:intergenic | 45.0% | |
| GGCAGAGCTTCTCAATGATA+GGG | + | chr1_2:19229745-19229764 | None:intergenic | 45.0% | |
| CTATCATTGAGAAGCTCTGC+CGG | - | chr1_2:19229744-19229763 | Msa0061220:intron | 45.0% | |
| AAAACGTCCGATGATAGTCG+TGG | + | chr1_2:19229855-19229874 | None:intergenic | 45.0% | |
| ! | CTGTGGCACACTTTGGAAAA+AGG | - | chr1_2:19229964-19229983 | Msa0061220:intron | 45.0% |
| GCAGCAAGGTCATTTAGAAG+AGG | + | chr1_2:19230006-19230025 | None:intergenic | 45.0% | |
| GGTTTCATTCCTTTGGTGGA+TGG | - | chr1_2:19230184-19230203 | Msa0061220:CDS | 45.0% | |
| ! | TTCATTCCTTTGGTGGATGG+TGG | - | chr1_2:19230187-19230206 | Msa0061220:CDS | 45.0% |
| ! | TCATTCCTTTGGTGGATGGT+GGG | - | chr1_2:19230188-19230207 | Msa0061220:CDS | 45.0% |
| AAAGCTTACCAGTACAAGCG+TGG | + | chr1_2:19230260-19230279 | None:intergenic | 45.0% | |
| GCGCTTGAGTCTACATAAGT+AGG | + | chr1_2:19230340-19230359 | None:intergenic | 45.0% | |
| ! | GAGAGCATATGTGACACTGA+GGG | - | chr1_2:19230919-19230938 | Msa0061220:intron | 45.0% |
| !! | CAGGCTGGCTGTTATCTTTT+TGG | - | chr1_2:19231062-19231081 | Msa0061220:intron | 45.0% |
| GCTATTCTCTATGCTGTTGC+GGG | - | chr1_2:19231171-19231190 | Msa0061220:intron | 45.0% | |
| ! | AATGAGGAGAAGGATAGTGG+TGG | - | chr1_2:19231345-19231364 | Msa0061220:intron | 45.0% |
| ! | GTATGCACTGGTGGTTTCTA+TGG | + | chr1_2:19231388-19231407 | None:intergenic | 45.0% |
| AGAAACCACCAGTGCATACA+TGG | - | chr1_2:19231389-19231408 | Msa0061220:intron | 45.0% | |
| TTCAGTTGCCATGTATGCAC+TGG | + | chr1_2:19231400-19231419 | None:intergenic | 45.0% | |
| TGCCTCTGTCCATATGAAGA+TGG | - | chr1_2:19232160-19232179 | Msa0061220:CDS | 45.0% | |
| CTCCATCTTCATATGGACAG+AGG | + | chr1_2:19232165-19232184 | None:intergenic | 45.0% | |
| ! | AGCGTTGAAAACTCCCAGTA+AGG | + | chr1_2:19232315-19232334 | None:intergenic | 45.0% |
| GCGTTGAAAGGTGGATGCTA+AGG | + | chr1_2:19227947-19227966 | None:intergenic | 50.0% | |
| TCATGATGTGAGCGGAGAAG+CGG | + | chr1_2:19228164-19228183 | None:intergenic | 50.0% | |
| CTTCTCCGCTCACATCATGA+AGG | - | chr1_2:19228164-19228183 | Msa0061220:CDS | 50.0% | |
| CGTTGCCTTCATGATGTGAG+CGG | + | chr1_2:19228172-19228191 | None:intergenic | 50.0% | |
| CGCTCACATCATGAAGGCAA+CGG | - | chr1_2:19228170-19228189 | Msa0061220:CDS | 50.0% | |
| TCACATCATGAAGGCAACGG+CGG | - | chr1_2:19228173-19228192 | Msa0061220:CDS | 50.0% | |
| ATCCGTCCTTGTACGCGAAA+CGG | - | chr1_2:19228256-19228275 | Msa0061220:intron | 50.0% | |
| TGGCTTCGAGTATCCCCAAT+CGG | + | chr1_2:19228309-19228328 | None:intergenic | 50.0% | |
| CATGTTCGGATGCTCGTCAA+CGG | + | chr1_2:19228399-19228418 | None:intergenic | 50.0% | |
| CGTAACCTACGATCCAAACG+CGG | + | chr1_2:19228427-19228446 | None:intergenic | 50.0% | |
| ACGTGAACTCGTCTCAATCC+AGG | - | chr1_2:19228585-19228604 | Msa0061220:intron | 50.0% | |
| TAGGTAGAGGGAGACTAGAG+AGG | - | chr1_2:19229050-19229069 | Msa0061220:CDS | 50.0% | |
| AGGTAGAGGGAGACTAGAGA+GGG | - | chr1_2:19229051-19229070 | Msa0061220:CDS | 50.0% | |
| AAAAGTGGGCAGAAGAGTGG+AGG | - | chr1_2:19229101-19229120 | Msa0061220:CDS | 50.0% | |
| TGGAGGAAAGAAGCCCAAAG+TGG | - | chr1_2:19229118-19229137 | Msa0061220:intron | 50.0% | |
| AAGAAGCCCAAAGTGGCGAT+TGG | - | chr1_2:19229125-19229144 | Msa0061220:intron | 50.0% | |
| GAAAAGTCGCTCAGCAAGCT+TGG | - | chr1_2:19229167-19229186 | Msa0061220:intron | 50.0% | |
| ! | GGAGGCTGGTTCACTAATGT+AGG | - | chr1_2:19229192-19229211 | Msa0061220:intron | 50.0% |
| CTGCGTGTGACTACTGTGTA+TGG | - | chr1_2:19229241-19229260 | Msa0061220:CDS | 50.0% | |
| AACCCTTAGAATTCCCCCTC+TGG | - | chr1_2:19229298-19229317 | Msa0061220:CDS | 50.0% | |
| GTTCCAGAGGGGGAATTCTA+AGG | + | chr1_2:19229304-19229323 | None:intergenic | 50.0% | |
| CACTCAAAGCACGTGACAAG+AGG | + | chr1_2:19229376-19229395 | None:intergenic | 50.0% | |
| ! | AGTGCTATTACGGCTAGTGG+TGG | - | chr1_2:19229392-19229411 | Msa0061220:intron | 50.0% |
| !! | GTCTTGGTATCGATTCCAGC+AGG | + | chr1_2:19229612-19229631 | None:intergenic | 50.0% |
| CGGCAGAGCTTCTCAATGAT+AGG | + | chr1_2:19229746-19229765 | None:intergenic | 50.0% | |
| TGTTACGCGCAGCTACATCA+AGG | - | chr1_2:19229823-19229842 | Msa0061220:intron | 50.0% | |
| GTTACGCGCAGCTACATCAA+GGG | - | chr1_2:19229824-19229843 | Msa0061220:intron | 50.0% | |
| TTACGCGCAGCTACATCAAG+GGG | - | chr1_2:19229825-19229844 | Msa0061220:intron | 50.0% | |
| GGGCTATCCACGACTATCAT+CGG | - | chr1_2:19229845-19229864 | Msa0061220:intron | 50.0% | |
| GTGAGGAATGGCACTATCAG+TGG | + | chr1_2:19229919-19229938 | None:intergenic | 50.0% | |
| TGCGGACATCGGATAATGTG+AGG | + | chr1_2:19229936-19229955 | None:intergenic | 50.0% | |
| TTATCCGATGTCCGCAGAAC+AGG | - | chr1_2:19229940-19229959 | Msa0061220:intron | 50.0% | |
| AACAGGACTGTGGCACACTT+TGG | - | chr1_2:19229957-19229976 | Msa0061220:intron | 50.0% | |
| CTGGGGTTTCATTCCTTTGG+TGG | - | chr1_2:19230180-19230199 | Msa0061220:CDS | 50.0% | |
| AAAAGCCCACCATCCACCAA+AGG | + | chr1_2:19230196-19230215 | None:intergenic | 50.0% | |
| !!! | GTGGATGGTGGGCTTTTACT+GGG | - | chr1_2:19230199-19230218 | Msa0061220:CDS | 50.0% |
| ! | GGCTTTTACTGGGTTGTCTC+TGG | - | chr1_2:19230209-19230228 | Msa0061220:CDS | 50.0% |
| AAGATGCTCCACGCTTGTAC+TGG | - | chr1_2:19230249-19230268 | Msa0061220:CDS | 50.0% | |
| ! | GCTATTTGTACCGGTGCTGA+AGG | - | chr1_2:19230375-19230394 | Msa0061220:intron | 50.0% |
| !! | TTTTCAGGCACCTTCAGCAC+CGG | + | chr1_2:19230388-19230407 | None:intergenic | 50.0% |
| AACCGCATCTGTATGGTCCT+TGG | - | chr1_2:19230809-19230828 | Msa0061220:intron | 50.0% | |
| CTCCAAGGACCATACAGATG+CGG | + | chr1_2:19230814-19230833 | None:intergenic | 50.0% | |
| ! | GGAGAGCATATGTGACACTG+AGG | - | chr1_2:19230918-19230937 | Msa0061220:intron | 50.0% |
| ! | TAGTGGTGGAGCTGGATCAA+TGG | - | chr1_2:19231359-19231378 | Msa0061220:intron | 50.0% |
| AGTTGCCATGTATGCACTGG+TGG | + | chr1_2:19231397-19231416 | None:intergenic | 50.0% | |
| GGAAATCATACCGCATCCTC+AGG | + | chr1_2:19231435-19231454 | None:intergenic | 50.0% | |
| GATGGTTGCAGGGAAGAGTA+TGG | + | chr1_2:19232195-19232214 | None:intergenic | 50.0% | |
| GAAGCTGAGCGAGGGAAGTA+CGG | + | chr1_2:19228208-19228227 | None:intergenic | 55.0% | |
| ACTTCCCTCGCTCAGCTTCT+CGG | - | chr1_2:19228209-19228228 | Msa0061220:CDS | 55.0% | |
| GTTTCGCGTACAAGGACGGA+TGG | + | chr1_2:19228257-19228276 | None:intergenic | 55.0% | |
| GCTCGACATGTCGTGGAACA+TGG | - | chr1_2:19228337-19228356 | Msa0061220:intron | 55.0% | |
| GTGGAACATGGCGTTCGTTG+TGG | - | chr1_2:19228349-19228368 | Msa0061220:intron | 55.0% | |
| CATGGCGTTCGTTGTGGTGT+CGG | - | chr1_2:19228355-19228374 | Msa0061220:intron | 55.0% | |
| CAAACGCGGATCGGCATGTT+CGG | + | chr1_2:19228413-19228432 | None:intergenic | 55.0% | |
| CCTACGATCCAAACGCGGAT+CGG | + | chr1_2:19228422-19228441 | None:intergenic | 55.0% | |
| AGTATCACCGCCGTAATCGG+AGG | - | chr1_2:19228486-19228505 | Msa0061220:intron | 55.0% | |
| GTATCACCGCCGTAATCGGA+GGG | - | chr1_2:19228487-19228506 | Msa0061220:intron | 55.0% | |
| TCCGCGAATCCCTCCGATTA+CGG | + | chr1_2:19228499-19228518 | None:intergenic | 55.0% | |
| AGTCGCTCAGCAAGCTTGGT+CGG | - | chr1_2:19229171-19229190 | Msa0061220:intron | 55.0% | |
| AGGCGTGCAGCTGTAATCAC+CGG | + | chr1_2:19229766-19229785 | None:intergenic | 55.0% | |
| CAGTCCTGTTCTGCGGACAT+CGG | + | chr1_2:19229947-19229966 | None:intergenic | 55.0% | |
| ATGTCCGCAGAACAGGACTG+TGG | - | chr1_2:19229947-19229966 | Msa0061220:intron | 55.0% | |
| TGTGCCACAGTCCTGTTCTG+CGG | + | chr1_2:19229954-19229973 | None:intergenic | 55.0% | |
| !!! | GGTGGATGGTGGGCTTTTAC+TGG | - | chr1_2:19230198-19230217 | Msa0061220:CDS | 55.0% |
| ! | AGCGTGGAGCATCTTGCAGA+AGG | + | chr1_2:19230244-19230263 | None:intergenic | 55.0% |
| ! | CTGGTTGGGTTGTCACTCCA+AGG | + | chr1_2:19230829-19230848 | None:intergenic | 55.0% |
| TCTCTATGCTGTTGCGGGAC+AGG | - | chr1_2:19231176-19231195 | Msa0061220:intron | 55.0% | |
| ! | GAGAAGGATAGTGGTGGAGC+TGG | - | chr1_2:19231351-19231370 | Msa0061220:intron | 55.0% |
| GAGCGGAGAAGCGGTGTTTG+TGG | + | chr1_2:19228155-19228174 | None:intergenic | 60.0% | |
| CATCATGAAGGCAACGGCGG+TGG | - | chr1_2:19228176-19228195 | Msa0061220:CDS | 60.0% | |
| GACGGATGGTCCTCTTCGTC+CGG | + | chr1_2:19228243-19228262 | None:intergenic | 60.0% | |
| CGCCGTTTCGCGTACAAGGA+CGG | + | chr1_2:19228261-19228280 | None:intergenic | 60.0% | |
| CGTCCTTGTACGCGAAACGG+CGG | - | chr1_2:19228259-19228278 | Msa0061220:intron | 60.0% | |
| !! | TCGAAGAGCGTCGTGCCGAT+TGG | - | chr1_2:19228291-19228310 | Msa0061220:intron | 60.0% |
| !! | CGAAGAGCGTCGTGCCGATT+GGG | - | chr1_2:19228292-19228311 | Msa0061220:intron | 60.0% |
| !! | GAAGAGCGTCGTGCCGATTG+GGG | - | chr1_2:19228293-19228312 | Msa0061220:intron | 60.0% |
| GACATGTCGAGCGCTACGAC+TGG | + | chr1_2:19228329-19228348 | None:intergenic | 60.0% | |
| TCGTAGCGCTCGACATGTCG+TGG | - | chr1_2:19228330-19228349 | Msa0061220:intron | 60.0% | |
| CGAACATGCCGATCCGCGTT+TGG | - | chr1_2:19228411-19228430 | Msa0061220:intron | 60.0% | |
| CCGATCCGCGTTTGGATCGT+AGG | - | chr1_2:19228419-19228438 | Msa0061220:intron | 60.0% | |
| GCGAATCCCTCCGATTACGG+CGG | + | chr1_2:19228496-19228515 | None:intergenic | 60.0% | |
| GCCGTAATCGGAGGGATTCG+CGG | - | chr1_2:19228495-19228514 | Msa0061220:intron | 60.0% | |
| GTAATCGGAGGGATTCGCGG+AGG | - | chr1_2:19228498-19228517 | Msa0061220:intron | 60.0% | |
| CATGAAGGCAACGGCGGTGG+CGG | - | chr1_2:19228179-19228198 | Msa0061220:CDS | 65.0% | |
| GCGTCCGAGAAGCTGAGCGA+GGG | + | chr1_2:19228216-19228235 | None:intergenic | 65.0% | |
| GGATGGTCCTCTTCGTCCGG+TGG | + | chr1_2:19228240-19228259 | None:intergenic | 65.0% | |
| ! | GGCGTTCGTTGTGGTGTCGG+CGG | - | chr1_2:19228358-19228377 | Msa0061220:intron | 65.0% |
| ATCGGAGGGATTCGCGGAGG+AGG | - | chr1_2:19228501-19228520 | Msa0061220:intron | 65.0% | |
| GGATTCGCGGAGGAGGCAGA+GGG | - | chr1_2:19228508-19228527 | Msa0061220:intron | 65.0% | |
| CGCTCAGCAAGCTTGGTCGG+AGG | - | chr1_2:19229174-19229193 | Msa0061220:intron | 65.0% | |
| CAGCAAGCTTGGTCGGAGGC+TGG | - | chr1_2:19229178-19229197 | Msa0061220:intron | 65.0% | |
| GGGGCAGTCTTTCCTCCACC+AGG | + | chr1_2:19229725-19229744 | None:intergenic | 65.0% | |
| CGCGTCCGAGAAGCTGAGCG+AGG | + | chr1_2:19228217-19228236 | None:intergenic | 70.0% | |
| CAGCTTCTCGGACGCGCCAC+CGG | - | chr1_2:19228221-19228240 | Msa0061220:CDS | 70.0% | |
| GCGCCGCCGTTTCGCGTACA+AGG | + | chr1_2:19228265-19228284 | None:intergenic | 70.0% | |
| GGGATTCGCGGAGGAGGCAG+AGG | - | chr1_2:19228507-19228526 | Msa0061220:intron | 70.0% | |
| GGACGCGCCACCGGACGAAG+AGG | - | chr1_2:19228230-19228249 | Msa0061220:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 19227852 | 19232568 | 19227852 | ID=Msa0061220;Name=Msa0061220 |
| chr1_2 | mRNA | 19227852 | 19232568 | 19227852 | ID=Msa0061220-mRNA-1;Parent=Msa0061220;Name=Msa0061220-mRNA-1;_AED=0.10;_eAED=0.10;_QI=273|1|1|1|1|1|5|259|351 |
| chr1_2 | exon | 19227852 | 19228272 | 19227852 | ID=Msa0061220-mRNA-1:exon:7499;Parent=Msa0061220-mRNA-1 |
| chr1_2 | exon | 19228977 | 19229135 | 19228977 | ID=Msa0061220-mRNA-1:exon:7498;Parent=Msa0061220-mRNA-1 |
| chr1_2 | exon | 19229223 | 19229355 | 19229223 | ID=Msa0061220-mRNA-1:exon:7497;Parent=Msa0061220-mRNA-1 |
| chr1_2 | exon | 19230150 | 19230269 | 19230150 | ID=Msa0061220-mRNA-1:exon:7496;Parent=Msa0061220-mRNA-1 |
| chr1_2 | exon | 19231814 | 19232568 | 19231814 | ID=Msa0061220-mRNA-1:exon:7495;Parent=Msa0061220-mRNA-1 |
| chr1_2 | five_prime_UTR | 19232296 | 19232568 | 19232296 | ID=Msa0061220-mRNA-1:five_prime_utr;Parent=Msa0061220-mRNA-1 |
| chr1_2 | CDS | 19231814 | 19232295 | 19231814 | ID=Msa0061220-mRNA-1:cds;Parent=Msa0061220-mRNA-1 |
| chr1_2 | CDS | 19230150 | 19230269 | 19230150 | ID=Msa0061220-mRNA-1:cds;Parent=Msa0061220-mRNA-1 |
| chr1_2 | CDS | 19229223 | 19229355 | 19229223 | ID=Msa0061220-mRNA-1:cds;Parent=Msa0061220-mRNA-1 |
| chr1_2 | CDS | 19228977 | 19229135 | 19228977 | ID=Msa0061220-mRNA-1:cds;Parent=Msa0061220-mRNA-1 |
| chr1_2 | CDS | 19228111 | 19228272 | 19228111 | ID=Msa0061220-mRNA-1:cds;Parent=Msa0061220-mRNA-1 |
| chr1_2 | three_prime_UTR | 19227852 | 19228110 | 19227852 | ID=Msa0061220-mRNA-1:three_prime_utr;Parent=Msa0061220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
