Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0001830 | sp|O22850|GPX3_ARATH | 67.553 | 188 | 60 | 1 | 14 | 200 | 19 | 206 | 5.28e-90 | 265 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001830 | Msa0004480 | 0.830792 | 2.405039e-55 | -8.615850e-47 |
| Msa0001830 | Msa0006060 | 0.815752 | 7.871386e-52 | -8.615850e-47 |
| Msa0001830 | Msa0007470 | 0.816157 | 6.392014e-52 | -8.615850e-47 |
| Msa0001830 | Msa0010490 | 0.876060 | 1.884439e-68 | -8.615850e-47 |
| Msa0001830 | Msa0010500 | 0.873156 | 1.828971e-67 | -8.615850e-47 |
| Msa0001830 | Msa0015930 | 0.818649 | 1.756109e-52 | -8.615850e-47 |
| Msa0001830 | Msa0017660 | 0.831111 | 2.009202e-55 | -8.615850e-47 |
| Msa0001830 | Msa0020390 | 0.817386 | 3.387832e-52 | -8.615850e-47 |
| Msa0001830 | Msa0023480 | 0.849937 | 2.346731e-60 | -8.615850e-47 |
| Msa0001830 | Msa0026630 | 0.813533 | 2.439905e-51 | -8.615850e-47 |
| Msa0001830 | Msa0035020 | 0.804710 | 1.895497e-49 | -8.615850e-47 |
| Msa0001830 | Msa0036540 | 0.836456 | 9.260879e-57 | -8.615850e-47 |
| Msa0001830 | Msa0041840 | 0.809021 | 2.324611e-50 | -8.615850e-47 |
| Msa0001830 | Msa0052360 | 0.812303 | 4.537249e-51 | -8.615850e-47 |
| Msa0001830 | Msa0059950 | 0.861894 | 7.442484e-64 | -8.615850e-47 |
| Msa0001830 | Msa0060070 | 0.805577 | 1.248241e-49 | -8.615850e-47 |
| Msa0001830 | Msa0061220 | 0.826001 | 3.446204e-54 | -8.615850e-47 |
| Msa0001830 | Msa0061500 | 0.829807 | 4.186314e-55 | -8.615850e-47 |
| Msa0001830 | Msa0071250 | 0.814388 | 1.580716e-51 | -8.615850e-47 |
| Msa0001830 | Msa0073870 | 0.809046 | 2.295922e-50 | -8.615850e-47 |
| Msa0001830 | Msa0077370 | 0.848374 | 6.382633e-60 | -8.615850e-47 |
| Msa0001830 | Msa0077380 | 0.804929 | 1.706018e-49 | -8.615850e-47 |
| Msa0001830 | Msa0082420 | 0.839072 | 1.972149e-57 | -8.615850e-47 |
| Msa0001830 | Msa0090380 | 0.841751 | 3.928902e-58 | -8.615850e-47 |
| Msa0001830 | Msa0090510 | 0.818736 | 1.677246e-52 | -8.615850e-47 |
| Msa0001830 | Msa0090550 | 0.808686 | 2.741605e-50 | -8.615850e-47 |
| Msa0001830 | Msa0095360 | 0.829801 | 4.201123e-55 | -8.615850e-47 |
| Msa0001830 | Msa0095770 | 0.831919 | 1.270271e-55 | -8.615850e-47 |
| Msa0001830 | Msa0098290 | 0.825797 | 3.853483e-54 | -8.615850e-47 |
| Msa0001830 | Msa0115190 | 0.848355 | 6.461499e-60 | -8.615850e-47 |
| Msa0001830 | Msa0117520 | 0.843780 | 1.135490e-58 | -8.615850e-47 |
| Msa0001830 | Msa0118540 | 0.838390 | 2.958388e-57 | -8.615850e-47 |
| Msa0001830 | Msa0119440 | 0.800337 | 1.511085e-48 | -8.615850e-47 |
| Msa0001830 | Msa0136630 | 0.845519 | 3.861676e-59 | -8.615850e-47 |
| Msa0001830 | Msa0137860 | 0.830997 | 2.142313e-55 | -8.615850e-47 |
| Msa0001830 | Msa0138020 | 0.822310 | 2.537262e-53 | -8.615850e-47 |
| Msa0001830 | Msa0138900 | 0.867861 | 1.001611e-65 | -8.615850e-47 |
| Msa0001830 | Msa0139670 | 0.802221 | 6.217541e-49 | -8.615850e-47 |
| Msa0001830 | Msa0150230 | 0.805891 | 1.072248e-49 | -8.615850e-47 |
| Msa0001830 | Msa0152560 | 0.857932 | 1.165401e-62 | -8.615850e-47 |
| Msa0001830 | Msa0155640 | 0.811121 | 8.204402e-51 | -8.615850e-47 |
| Msa0001830 | Msa0155890 | 0.819637 | 1.046141e-52 | -8.615850e-47 |
| Msa0001830 | Msa0156370 | 0.801577 | 8.433970e-49 | -8.615850e-47 |
| Msa0001830 | Msa0160960 | 0.851339 | 9.468329e-61 | -8.615850e-47 |
| Msa0001830 | Msa0162630 | 0.830585 | 2.703262e-55 | -8.615850e-47 |
| Msa0001830 | Msa0167980 | 0.807115 | 5.916214e-50 | -8.615850e-47 |
| Msa0001830 | Msa0176260 | 0.836109 | 1.134471e-56 | -8.615850e-47 |
| Msa0001830 | Msa0179140 | 0.810010 | 1.425802e-50 | -8.615850e-47 |
| Msa0001830 | Msa0183850 | 0.810090 | 1.369925e-50 | -8.615850e-47 |
| Msa0001830 | Msa0183870 | 0.802945 | 4.408326e-49 | -8.615850e-47 |
| Msa0001830 | Msa0183910 | 0.821370 | 4.186215e-53 | -8.615850e-47 |
| Msa0001830 | Msa0187310 | 0.831848 | 1.323069e-55 | -8.615850e-47 |
| Msa0001830 | Msa0190590 | 0.826281 | 2.957362e-54 | -8.615850e-47 |
| Msa0001830 | Msa0194920 | 0.801021 | 1.095928e-48 | -8.615850e-47 |
| Msa0001830 | Msa0196670 | 0.818900 | 1.539600e-52 | -8.615850e-47 |
| Msa0001830 | Msa0196880 | 0.833546 | 5.011014e-56 | -8.615850e-47 |
| Msa0001830 | Msa0204960 | 0.802408 | 5.691646e-49 | -8.615850e-47 |
| Msa0001830 | Msa0213430 | 0.818747 | 1.668435e-52 | -8.615850e-47 |
| Msa0001830 | Msa0213540 | 0.830855 | 2.321645e-55 | -8.615850e-47 |
| Msa0001830 | Msa0216850 | -0.800200 | 1.611491e-48 | -8.615850e-47 |
| Msa0001830 | Msa0223980 | 0.813721 | 2.218064e-51 | -8.615850e-47 |
| Msa0001830 | Msa0224130 | 0.806264 | 8.950475e-50 | -8.615850e-47 |
| Msa0001830 | Msa0227360 | 0.823326 | 1.471223e-53 | -8.615850e-47 |
| Msa0001830 | Msa0232790 | 0.825744 | 3.966473e-54 | -8.615850e-47 |
| Msa0001830 | Msa0233370 | 0.833875 | 4.147516e-56 | -8.615850e-47 |
| Msa0001830 | Msa0233970 | 0.825084 | 5.685453e-54 | -8.615850e-47 |
| Msa0001830 | Msa0234410 | -0.803051 | 4.192331e-49 | -8.615850e-47 |
| Msa0001830 | Msa0243090 | 0.810152 | 1.328611e-50 | -8.615850e-47 |
| Msa0001830 | Msa0257490 | 0.819841 | 9.396850e-53 | -8.615850e-47 |
| Msa0001830 | Msa0257520 | 0.804076 | 2.569861e-49 | -8.615850e-47 |
| Msa0001830 | Msa0259680 | 0.803991 | 2.676688e-49 | -8.615850e-47 |
| Msa0001830 | Msa0264680 | 0.821822 | 3.291386e-53 | -8.615850e-47 |
| Msa0001830 | Msa0265270 | 0.808502 | 3.001056e-50 | -8.615850e-47 |
| Msa0001830 | Msa0272400 | 0.831990 | 1.220204e-55 | -8.615850e-47 |
| Msa0001830 | Msa0276100 | 0.837432 | 5.216848e-57 | -8.615850e-47 |
| Msa0001830 | Msa0276430 | 0.861951 | 7.150016e-64 | -8.615850e-47 |
| Msa0001830 | Msa0278580 | 0.840134 | 1.044241e-57 | -8.615850e-47 |
| Msa0001830 | Msa0284450 | 0.803937 | 2.746978e-49 | -8.615850e-47 |
| Msa0001830 | Msa0296790 | 0.804973 | 1.670241e-49 | -8.615850e-47 |
| Msa0001830 | Msa0296820 | 0.813309 | 2.731590e-51 | -8.615850e-47 |
| Msa0001830 | Msa0297810 | -0.811799 | 5.842374e-51 | -8.615850e-47 |
| Msa0001830 | Msa0299660 | 0.817364 | 3.427218e-52 | -8.615850e-47 |
| Msa0001830 | Msa0302730 | 0.840303 | 9.431575e-58 | -8.615850e-47 |
| Msa0001830 | Msa0302840 | 0.820134 | 8.050886e-53 | -8.615850e-47 |
| Msa0001830 | Msa0305410 | 0.829368 | 5.354553e-55 | -8.615850e-47 |
| Msa0001830 | Msa0310440 | 0.823880 | 1.091415e-53 | -8.615850e-47 |
| Msa0001830 | Msa0312590 | 0.833398 | 5.456589e-56 | -8.615850e-47 |
| Msa0001830 | Msa0316470 | 0.842913 | 1.933929e-58 | -8.615850e-47 |
| Msa0001830 | Msa0317960 | 0.820903 | 5.362062e-53 | -8.615850e-47 |
| Msa0001830 | Msa0319020 | 0.821177 | 4.639079e-53 | -8.615850e-47 |
| Msa0001830 | Msa0322240 | 0.804489 | 2.107456e-49 | -8.615850e-47 |
| Msa0001830 | Msa0331020 | 0.850447 | 1.688147e-60 | -8.615850e-47 |
| Msa0001830 | Msa0332190 | 0.802831 | 4.655158e-49 | -8.615850e-47 |
| Msa0001830 | Msa0335820 | -0.812278 | 4.594840e-51 | -8.615850e-47 |
| Msa0001830 | Msa0341480 | 0.810780 | 9.720498e-51 | -8.615850e-47 |
| Msa0001830 | Msa0347750 | 0.833065 | 6.604188e-56 | -8.615850e-47 |
| Msa0001830 | Msa0348640 | 0.804343 | 2.260513e-49 | -8.615850e-47 |
| Msa0001830 | Msa0358860 | 0.827215 | 1.769204e-54 | -8.615850e-47 |
| Msa0001830 | Msa0364790 | 0.842171 | 3.043362e-58 | -8.615850e-47 |
| Msa0001830 | Msa0365950 | 0.814333 | 1.624817e-51 | -8.615850e-47 |
| Msa0001830 | Msa0367760 | 0.843933 | 1.032878e-58 | -8.615850e-47 |
| Msa0001830 | Msa0374890 | 0.800804 | 1.213665e-48 | -8.615850e-47 |
| Msa0001830 | Msa0380100 | 0.846126 | 2.641812e-59 | -8.615850e-47 |
| Msa0001830 | Msa0380600 | 0.827586 | 1.441728e-54 | -8.615850e-47 |
| Msa0001830 | Msa0385490 | 0.803347 | 3.640418e-49 | -8.615850e-47 |
| Msa0001830 | Msa0385500 | 0.845103 | 5.002908e-59 | -8.615850e-47 |
| Msa0001830 | Msa0388730 | 0.869559 | 2.827179e-66 | -8.615850e-47 |
| Msa0001830 | Msa0389210 | 0.887300 | 1.610630e-72 | -8.615850e-47 |
| Msa0001830 | Msa0403770 | 0.835213 | 1.912976e-56 | -8.615850e-47 |
| Msa0001830 | Msa0412260 | 0.821566 | 3.771868e-53 | -8.615850e-47 |
| Msa0001830 | Msa0413870 | 0.804479 | 2.118057e-49 | -8.615850e-47 |
| Msa0001830 | Msa0427580 | 0.828601 | 8.213295e-55 | -8.615850e-47 |
| Msa0001830 | Msa0430240 | 0.825103 | 5.624410e-54 | -8.615850e-47 |
| Msa0001830 | Msa0431980 | 0.829834 | 4.124680e-55 | -8.615850e-47 |
| Msa0001830 | Msa0432500 | 0.806988 | 6.294550e-50 | -8.615850e-47 |
| Msa0001830 | Msa0456770 | 0.843890 | 1.060757e-58 | -8.615850e-47 |
| Msa0001830 | Msa0460740 | 0.838700 | 2.460791e-57 | -8.615850e-47 |
| Msa0001830 | Msa0469620 | -0.819415 | 1.175329e-52 | -8.615850e-47 |
| Msa0001830 | Msa0470880 | 0.817778 | 2.763846e-52 | -8.615850e-47 |
| Msa0001830 | Msa0481400 | 0.816656 | 4.942530e-52 | -8.615850e-47 |
| Msa0001830 | Msa0482940 | 0.828025 | 1.130665e-54 | -8.615850e-47 |
| Msa0001830 | Msa0484630 | 0.827393 | 1.604081e-54 | -8.615850e-47 |
| Msa0001830 | Msa0484640 | 0.828733 | 7.630445e-55 | -8.615850e-47 |
| Msa0001830 | Msa0485710 | 0.840272 | 9.609386e-58 | -8.615850e-47 |
| Msa0001830 | Msa0518170 | 0.856335 | 3.449021e-62 | -8.615850e-47 |
| Msa0001830 | Msa0519160 | 0.817627 | 2.989566e-52 | -8.615850e-47 |
| Msa0001830 | Msa0520850 | 0.834468 | 2.945146e-56 | -8.615850e-47 |
| Msa0001830 | Msa0523870 | 0.803556 | 3.294734e-49 | -8.615850e-47 |
| Msa0001830 | Msa0527540 | 0.807893 | 4.047162e-50 | -8.615850e-47 |
| Msa0001830 | Msa0527740 | 0.800526 | 1.382947e-48 | -8.615850e-47 |
| Msa0001830 | Msa0528990 | 0.829111 | 6.180961e-55 | -8.615850e-47 |
| Msa0001830 | Msa0529000 | 0.850477 | 1.656108e-60 | -8.615850e-47 |
| Msa0001830 | Msa0534870 | 0.940667 | 1.576690e-100 | -8.615850e-47 |
| Msa0001830 | Msa0536350 | 0.800231 | 1.588254e-48 | -8.615850e-47 |
| Msa0001830 | Msa0542560 | 0.848952 | 4.414541e-60 | -8.615850e-47 |
| Msa0001830 | Msa0544840 | 0.816422 | 5.577056e-52 | -8.615850e-47 |
| Msa0001830 | Msa0545050 | 0.849270 | 3.600994e-60 | -8.615850e-47 |
| Msa0001830 | Msa0567370 | 0.817228 | 3.677593e-52 | -8.615850e-47 |
| Msa0001830 | Msa0567520 | 0.816032 | 6.816277e-52 | -8.615850e-47 |
| Msa0001830 | Msa0569780 | 0.806752 | 7.060152e-50 | -8.615850e-47 |
| Msa0001830 | Msa0570700 | 0.846471 | 2.127488e-59 | -8.615850e-47 |
| Msa0001830 | Msa0573890 | 0.810156 | 1.325866e-50 | -8.615850e-47 |
| Msa0001830 | Msa0574930 | 0.945089 | 5.854968e-104 | -8.615850e-47 |
| Msa0001830 | Msa0584580 | 0.802682 | 4.996007e-49 | -8.615850e-47 |
| Msa0001830 | Msa0584600 | 0.800789 | 1.221973e-48 | -8.615850e-47 |
| Msa0001830 | Msa0588260 | 0.830813 | 2.376608e-55 | -8.615850e-47 |
| Msa0001830 | Msa0600590 | 0.866172 | 3.463380e-65 | -8.615850e-47 |
| Msa0001830 | Msa0604290 | 0.837186 | 6.029432e-57 | -8.615850e-47 |
| Msa0001830 | Msa0610830 | 0.859305 | 4.535012e-63 | -8.615850e-47 |
| Msa0001830 | Msa0613340 | 0.811633 | 6.349751e-51 | -8.615850e-47 |
| Msa0001830 | Msa0625700 | 0.814685 | 1.358581e-51 | -8.615850e-47 |
| Msa0001830 | Msa0629240 | 0.815694 | 8.106262e-52 | -8.615850e-47 |
| Msa0001830 | Msa0631320 | 0.939397 | 1.361617e-99 | -8.615850e-47 |
| Msa0001830 | Msa0631350 | 0.805460 | 1.320613e-49 | -8.615850e-47 |
| Msa0001830 | Msa0641130 | 0.840557 | 8.092331e-58 | -8.615850e-47 |
| Msa0001830 | Msa0649220 | 0.816628 | 5.013608e-52 | -8.615850e-47 |
| Msa0001830 | Msa0653830 | 0.822629 | 2.138238e-53 | -8.615850e-47 |
| Msa0001830 | Msa0654620 | 0.807162 | 5.783314e-50 | -8.615850e-47 |
| Msa0001830 | Msa0654900 | 0.820184 | 7.844755e-53 | -8.615850e-47 |
| Msa0001830 | Msa0657120 | 0.818322 | 2.082895e-52 | -8.615850e-47 |
| Msa0001830 | Msa0659790 | 0.829779 | 4.252579e-55 | -8.615850e-47 |
| Msa0001830 | Msa0669700 | 0.820195 | 7.797471e-53 | -8.615850e-47 |
| Msa0001830 | Msa0679670 | 0.835540 | 1.581268e-56 | -8.615850e-47 |
| Msa0001830 | Msa0683600 | 0.802011 | 6.868748e-49 | -8.615850e-47 |
| Msa0001830 | Msa0689320 | 0.829385 | 5.302018e-55 | -8.615850e-47 |
| Msa0001830 | Msa0693520 | 0.843039 | 1.789973e-58 | -8.615850e-47 |
| Msa0001830 | Msa0698450 | 0.803675 | 3.113637e-49 | -8.615850e-47 |
| Msa0001830 | Msa0698460 | 0.828012 | 1.139100e-54 | -8.615850e-47 |
| Msa0001830 | Msa0701100 | 0.821560 | 3.784894e-53 | -8.615850e-47 |
| Msa0001830 | Msa0703810 | 0.852926 | 3.348645e-61 | -8.615850e-47 |
| Msa0001830 | Msa0703910 | 0.804969 | 1.673802e-49 | -8.615850e-47 |
| Msa0001830 | Msa0705990 | 0.819118 | 1.373983e-52 | -8.615850e-47 |
| Msa0001830 | Msa0709120 | 0.801311 | 9.561514e-49 | -8.615850e-47 |
| Msa0001830 | Msa0711150 | 0.821950 | 3.074132e-53 | -8.615850e-47 |
| Msa0001830 | Msa0713060 | 0.836646 | 8.285375e-57 | -8.615850e-47 |
| Msa0001830 | Msa0719180 | 0.833312 | 5.731730e-56 | -8.615850e-47 |
| Msa0001830 | Msa0724370 | 0.813790 | 2.141987e-51 | -8.615850e-47 |
| Msa0001830 | Msa0741440 | 0.828980 | 6.649725e-55 | -8.615850e-47 |
| Msa0001830 | Msa0742150 | 0.826685 | 2.368293e-54 | -8.615850e-47 |
| Msa0001830 | Msa0744640 | 0.845049 | 5.174423e-59 | -8.615850e-47 |
| Msa0001830 | Msa0746170 | 0.844798 | 6.046221e-59 | -8.615850e-47 |
| Msa0001830 | Msa0746210 | 0.846189 | 2.539566e-59 | -8.615850e-47 |
| Msa0001830 | Msa0750850 | 0.832781 | 7.772693e-56 | -8.615850e-47 |
| Msa0001830 | Msa0764920 | 0.818090 | 2.349550e-52 | -8.615850e-47 |
| Msa0001830 | Msa0767370 | 0.813725 | 2.213353e-51 | -8.615850e-47 |
| Msa0001830 | Msa0769720 | 0.812178 | 4.831868e-51 | -8.615850e-47 |
| Msa0001830 | Msa0769970 | 0.841458 | 4.693611e-58 | -8.615850e-47 |
| Msa0001830 | Msa0775560 | 0.812628 | 3.852402e-51 | -8.615850e-47 |
| Msa0001830 | Msa0795730 | 0.837892 | 3.974312e-57 | -8.615850e-47 |
| Msa0001830 | Msa0796580 | -0.814850 | 1.248899e-51 | -8.615850e-47 |
| Msa0001830 | Msa0800370 | 0.819612 | 1.060084e-52 | -8.615850e-47 |
| Msa0001830 | Msa0802240 | 0.863184 | 2.983504e-64 | -8.615850e-47 |
| Msa0001830 | Msa0808090 | 0.807867 | 4.097391e-50 | -8.615850e-47 |
| Msa0001830 | Msa0812530 | 0.816383 | 5.689289e-52 | -8.615850e-47 |
| Msa0001830 | Msa0812950 | 0.814045 | 1.881778e-51 | -8.615850e-47 |
| Msa0001830 | Msa0822500 | 0.835232 | 1.892087e-56 | -8.615850e-47 |
| Msa0001830 | Msa0823440 | 0.835926 | 1.262325e-56 | -8.615850e-47 |
| Msa0001830 | Msa0826150 | 0.807866 | 4.099919e-50 | -8.615850e-47 |
| Msa0001830 | Msa0841730 | 0.844113 | 9.245742e-59 | -8.615850e-47 |
| Msa0001830 | Msa0841780 | 0.804763 | 1.847892e-49 | -8.615850e-47 |
| Msa0001830 | Msa0852790 | 0.805680 | 1.187457e-49 | -8.615850e-47 |
| Msa0001830 | Msa0853440 | 0.818729 | 1.683517e-52 | -8.615850e-47 |
| Msa0001830 | Msa0861470 | 0.844928 | 5.578193e-59 | -8.615850e-47 |
| Msa0001830 | Msa0861570 | 0.851389 | 9.161879e-61 | -8.615850e-47 |
| Msa0001830 | Msa0863990 | 0.803213 | 3.880050e-49 | -8.615850e-47 |
| Msa0001830 | Msa0865030 | 0.832141 | 1.119751e-55 | -8.615850e-47 |
| Msa0001830 | Msa0870510 | 0.844593 | 6.868868e-59 | -8.615850e-47 |
| Msa0001830 | Msa0880810 | 0.834424 | 3.021537e-56 | -8.615850e-47 |
| Msa0001830 | Msa0881530 | -0.829572 | 4.776877e-55 | -8.615850e-47 |
| Msa0001830 | Msa0888260 | 0.812919 | 3.327029e-51 | -8.615850e-47 |
| Msa0001830 | Msa0894710 | 0.818735 | 1.678372e-52 | -8.615850e-47 |
| Msa0001830 | Msa0910620 | 0.813040 | 3.129745e-51 | -8.615850e-47 |
| Msa0001830 | Msa0930740 | 0.967777 | 9.540711e-128 | -8.615850e-47 |
| Msa0001830 | Msa0944020 | 0.807628 | 4.606356e-50 | -8.615850e-47 |
| Msa0001830 | Msa0944610 | 0.805829 | 1.104884e-49 | -8.615850e-47 |
| Msa0001830 | Msa0945130 | 0.853354 | 2.526547e-61 | -8.615850e-47 |
| Msa0001830 | Msa0982090 | -0.826958 | 2.038244e-54 | -8.615850e-47 |
| Msa0001830 | Msa0985180 | 0.818304 | 2.101545e-52 | -8.615850e-47 |
| Msa0001830 | Msa0994370 | 0.830951 | 2.198908e-55 | -8.615850e-47 |
| Msa0001830 | Msa0994910 | 0.814760 | 1.307716e-51 | -8.615850e-47 |
| Msa0001830 | Msa0999920 | 0.806419 | 8.302274e-50 | -8.615850e-47 |
| Msa0001830 | Msa1013070 | 0.847250 | 1.302600e-59 | -8.615850e-47 |
| Msa0001830 | Msa1023310 | 0.877851 | 4.511303e-69 | -8.615850e-47 |
| Msa0001830 | Msa1024710 | 0.803136 | 4.026719e-49 | -8.615850e-47 |
| Msa0001830 | Msa1029050 | 0.823131 | 1.634017e-53 | -8.615850e-47 |
| Msa0001830 | Msa1042660 | 0.803774 | 2.968975e-49 | -8.615850e-47 |
| Msa0001830 | Msa1044510 | 0.841356 | 4.993775e-58 | -8.615850e-47 |
| Msa0001830 | Msa1051850 | 0.815179 | 1.055747e-51 | -8.615850e-47 |
| Msa0001830 | Msa1053680 | 0.816272 | 6.024690e-52 | -8.615850e-47 |
| Msa0001830 | Msa1059470 | 0.864368 | 1.278879e-64 | -8.615850e-47 |
| Msa0001830 | Msa1059670 | 0.803274 | 3.770125e-49 | -8.615850e-47 |
| Msa0001830 | Msa1062040 | 0.916811 | 1.136485e-85 | -8.615850e-47 |
| Msa0001830 | Msa1071320 | 0.850377 | 1.766884e-60 | -8.615850e-47 |
| Msa0001830 | Msa1072900 | 0.800182 | 1.624855e-48 | -8.615850e-47 |
| Msa0001830 | Msa1081790 | -0.817456 | 3.267675e-52 | -8.615850e-47 |
| Msa0001830 | Msa1082360 | 0.842345 | 2.737064e-58 | -8.615850e-47 |
| Msa0001830 | Msa1089320 | 0.807751 | 4.336491e-50 | -8.615850e-47 |
| Msa0001830 | Msa1089460 | 0.829701 | 4.443424e-55 | -8.615850e-47 |
| Msa0001830 | Msa1093100 | 0.803117 | 4.063118e-49 | -8.615850e-47 |
| Msa0001830 | Msa1094280 | 0.800522 | 1.385363e-48 | -8.615850e-47 |
| Msa0001830 | Msa1096070 | 0.847885 | 8.710179e-60 | -8.615850e-47 |
| Msa0001830 | Msa1096950 | 0.825674 | 4.120634e-54 | -8.615850e-47 |
| Msa0001830 | Msa1107190 | 0.811040 | 8.538876e-51 | -8.615850e-47 |
| Msa0001830 | Msa1107200 | 0.909740 | 4.077615e-82 | -8.615850e-47 |
| Msa0001830 | Msa1109810 | 0.838827 | 2.281293e-57 | -8.615850e-47 |
| Msa0001830 | Msa1128270 | 0.812757 | 3.611204e-51 | -8.615850e-47 |
| Msa0001830 | Msa1128280 | 0.815031 | 1.138411e-51 | -8.615850e-47 |
| Msa0001830 | Msa1133230 | 0.835684 | 1.454240e-56 | -8.615850e-47 |
| Msa0001830 | Msa1133250 | 0.805193 | 1.501987e-49 | -8.615850e-47 |
| Msa0001830 | Msa1150780 | 0.897717 | 1.072712e-76 | -8.615850e-47 |
| Msa0001830 | Msa1150790 | 0.809029 | 2.315603e-50 | -8.615850e-47 |
| Msa0001830 | Msa1158640 | -0.830145 | 3.463705e-55 | -8.615850e-47 |
| Msa0001830 | Msa1165270 | 0.814881 | 1.228984e-51 | -8.615850e-47 |
| Msa0001830 | Msa1166090 | -0.824014 | 1.015497e-53 | -8.615850e-47 |
| Msa0001830 | Msa1169920 | 0.802289 | 6.020321e-49 | -8.615850e-47 |
| Msa0001830 | Msa1176170 | 0.847840 | 8.964400e-60 | -8.615850e-47 |
| Msa0001830 | Msa1176380 | 0.847352 | 1.221045e-59 | -8.615850e-47 |
| Msa0001830 | Msa1176720 | 0.862463 | 4.978697e-64 | -8.615850e-47 |
| Msa0001830 | Msa1180720 | 0.851554 | 8.228307e-61 | -8.615850e-47 |
| Msa0001830 | Msa1181060 | 0.808938 | 2.422188e-50 | -8.615850e-47 |
| Msa0001830 | Msa1183140 | 0.849773 | 2.607225e-60 | -8.615850e-47 |
| Msa0001830 | Msa1184690 | 0.824363 | 8.405839e-54 | -8.615850e-47 |
| Msa0001830 | Msa1191440 | 0.868096 | 8.412776e-66 | -8.615850e-47 |
| Msa0001830 | Msa1206270 | 0.843656 | 1.225250e-58 | -8.615850e-47 |
| Msa0001830 | Msa1206290 | 0.820079 | 8.289010e-53 | -8.615850e-47 |
| Msa0001830 | Msa1206320 | 0.817121 | 3.887054e-52 | -8.615850e-47 |
| Msa0001830 | Msa1207310 | 0.828428 | 9.040372e-55 | -8.615850e-47 |
| Msa0001830 | Msa1208380 | 0.837829 | 4.126960e-57 | -8.615850e-47 |
| Msa0001830 | Msa1218160 | 0.860510 | 1.964997e-63 | -8.615850e-47 |
| Msa0001830 | Msa1218580 | 0.832090 | 1.152470e-55 | -8.615850e-47 |
| Msa0001830 | Msa1220880 | 0.810717 | 1.003020e-50 | -8.615850e-47 |
| Msa0001830 | Msa1220930 | 0.804753 | 1.857092e-49 | -8.615850e-47 |
| Msa0001830 | Msa1225580 | 0.837068 | 6.462253e-57 | -8.615850e-47 |
| Msa0001830 | Msa1229480 | 0.856297 | 3.537628e-62 | -8.615850e-47 |
| Msa0001830 | Msa1231190 | 0.835864 | 1.308692e-56 | -8.615850e-47 |
| Msa0001830 | Msa1231710 | 0.843070 | 1.756029e-58 | -8.615850e-47 |
| Msa0001830 | Msa1231840 | 0.836567 | 8.678281e-57 | -8.615850e-47 |
| Msa0001830 | Msa1236470 | 0.853494 | 2.302581e-61 | -8.615850e-47 |
| Msa0001830 | Msa1238500 | 0.807037 | 6.147628e-50 | -8.615850e-47 |
| Msa0001830 | Msa1238680 | 0.843143 | 1.679447e-58 | -8.615850e-47 |
| Msa0001830 | Msa1239620 | 0.811795 | 5.855869e-51 | -8.615850e-47 |
| Msa0001830 | Msa1240970 | 0.836580 | 8.608053e-57 | -8.615850e-47 |
| Msa0001830 | Msa1246780 | 0.810283 | 1.244721e-50 | -8.615850e-47 |
| Msa0001830 | Msa1252810 | 0.840989 | 6.234445e-58 | -8.615850e-47 |
| Msa0001830 | Msa1256810 | 0.842448 | 2.569723e-58 | -8.615850e-47 |
| Msa0001830 | Msa1259860 | 0.801469 | 8.874849e-49 | -8.615850e-47 |
| Msa0001830 | Msa1260680 | 0.804311 | 2.296298e-49 | -8.615850e-47 |
| Msa0001830 | Msa1266150 | 0.804731 | 1.876308e-49 | -8.615850e-47 |
| Msa0001830 | Msa1266170 | 0.818967 | 1.486741e-52 | -8.615850e-47 |
| Msa0001830 | Msa1270050 | 0.883230 | 5.348766e-71 | -8.615850e-47 |
| Msa0001830 | Msa1272010 | 0.816240 | 6.123431e-52 | -8.615850e-47 |
| Msa0001830 | Msa1274380 | 0.825395 | 4.798166e-54 | -8.615850e-47 |
| Msa0001830 | Msa1276150 | 0.801862 | 7.369064e-49 | -8.615850e-47 |
| Msa0001830 | Msa1277410 | 0.869423 | 3.130614e-66 | -8.615850e-47 |
| Msa0001830 | Msa1277780 | 0.860873 | 1.524266e-63 | -8.615850e-47 |
| Msa0001830 | Msa1279100 | 0.804815 | 1.802107e-49 | -8.615850e-47 |
| Msa0001830 | Msa1279480 | 0.817989 | 2.477176e-52 | -8.615850e-47 |
| Msa0001830 | Msa1280170 | 0.820793 | 5.685312e-53 | -8.615850e-47 |
| Msa0001830 | Msa1280340 | 0.807836 | 4.161537e-50 | -8.615850e-47 |
| Msa0001830 | Msa1286210 | 0.819101 | 1.386101e-52 | -8.615850e-47 |
| Msa0001830 | Msa1298010 | 0.811052 | 8.489230e-51 | -8.615850e-47 |
| Msa0001830 | Msa1307160 | 0.879271 | 1.427929e-69 | -8.615850e-47 |
| Msa0001830 | Msa1307180 | 0.877302 | 7.005182e-69 | -8.615850e-47 |
| Msa0001830 | Msa1309760 | 0.833676 | 4.651568e-56 | -8.615850e-47 |
| Msa0001830 | Msa1312440 | 0.842617 | 2.317950e-58 | -8.615850e-47 |
| Msa0001830 | Msa1316360 | 0.890667 | 8.011398e-74 | -8.615850e-47 |
| Msa0001830 | Msa1316460 | 0.831868 | 1.308089e-55 | -8.615850e-47 |
| Msa0001830 | Msa1334840 | 0.802318 | 5.938777e-49 | -8.615850e-47 |
| Msa0001830 | Msa1336560 | 0.823150 | 1.617515e-53 | -8.615850e-47 |
| Msa0001830 | Msa1341060 | 0.831310 | 1.795210e-55 | -8.615850e-47 |
| Msa0001830 | Msa1346840 | 0.828671 | 7.897169e-55 | -8.615850e-47 |
| Msa0001830 | Msa1352660 | 0.808821 | 2.565743e-50 | -8.615850e-47 |
| Msa0001830 | Msa1352890 | 0.850626 | 1.503705e-60 | -8.615850e-47 |
| Msa0001830 | Msa1355510 | 0.821453 | 4.005962e-53 | -8.615850e-47 |
| Msa0001830 | Msa1355890 | 0.864125 | 1.523031e-64 | -8.615850e-47 |
| Msa0001830 | Msa1364210 | 0.808197 | 3.485544e-50 | -8.615850e-47 |
| Msa0001830 | Msa1368710 | 0.824399 | 8.244058e-54 | -8.615850e-47 |
| Msa0001830 | Msa1369920 | -0.806914 | 6.526516e-50 | -8.615850e-47 |
| Msa0001830 | Msa1370590 | 0.832107 | 1.141642e-55 | -8.615850e-47 |
| Msa0001830 | Msa1372280 | 0.820998 | 5.098718e-53 | -8.615850e-47 |
| Msa0001830 | Msa1374830 | 0.838987 | 2.073935e-57 | -8.615850e-47 |
| Msa0001830 | Msa1380220 | 0.816853 | 4.462902e-52 | -8.615850e-47 |
| Msa0001830 | Msa1382020 | 0.820678 | 6.041556e-53 | -8.615850e-47 |
| Msa0001830 | Msa1382380 | -0.828864 | 7.093486e-55 | -8.615850e-47 |
| Msa0001830 | Msa1384100 | 0.830808 | 2.383375e-55 | -8.615850e-47 |
| Msa0001830 | Msa1385730 | 0.800746 | 1.246969e-48 | -8.615850e-47 |
| Msa0001830 | Msa1386000 | 0.831182 | 1.930210e-55 | -8.615850e-47 |
| Msa0001830 | Msa1395730 | 0.812724 | 3.671298e-51 | -8.615850e-47 |
| Msa0001830 | Msa1396400 | -0.826459 | 2.681064e-54 | -8.615850e-47 |
| Msa0001830 | Msa1404290 | 0.802516 | 5.406505e-49 | -8.615850e-47 |
| Msa0001830 | Msa1407760 | 0.877655 | 5.281012e-69 | -8.615850e-47 |
| Msa0001830 | Msa1415410 | 0.806313 | 8.739713e-50 | -8.615850e-47 |
| Msa0001830 | Msa1419840 | 0.807573 | 4.732854e-50 | -8.615850e-47 |
| Msa0001830 | Msa1420270 | 0.803585 | 3.249288e-49 | -8.615850e-47 |
| Msa0001830 | Msa1421060 | 0.838919 | 2.160571e-57 | -8.615850e-47 |
| Msa0001830 | Msa1421210 | 0.815949 | 7.110922e-52 | -8.615850e-47 |
| Msa0001830 | Msa1422810 | 0.813849 | 2.078515e-51 | -8.615850e-47 |
| Msa0001830 | Msa1423540 | 0.811020 | 8.627446e-51 | -8.615850e-47 |
| Msa0001830 | Msa1428780 | 0.803583 | 3.252988e-49 | -8.615850e-47 |
| Msa0001830 | Msa1430130 | 0.837832 | 4.117361e-57 | -8.615850e-47 |
| Msa0001830 | Msa1433410 | 0.840759 | 7.166671e-58 | -8.615850e-47 |
| Msa0001830 | Msa1436600 | 0.829984 | 3.791429e-55 | -8.615850e-47 |
| Msa0001830 | Msa1437730 | 0.868374 | 6.846618e-66 | -8.615850e-47 |
| Msa0001830 | Msa1438840 | 0.834596 | 2.736197e-56 | -8.615850e-47 |
| Msa0001830 | Msa1443620 | 0.835560 | 1.562761e-56 | -8.615850e-47 |
| Msa0001830 | Msa1443640 | 0.812842 | 3.458963e-51 | -8.615850e-47 |
| Msa0001830 | Msa1444120 | 0.829748 | 4.327577e-55 | -8.615850e-47 |
| Msa0001830 | Msa1457160 | 0.809462 | 1.870170e-50 | -8.615850e-47 |
| Msa0001830 | Msa1457620 | 0.809362 | 1.964277e-50 | -8.615850e-47 |
| Msa0001830 | Msa1458090 | 0.819720 | 1.001403e-52 | -8.615850e-47 |
| Msa0001830 | Msa1460750 | 0.836535 | 8.841655e-57 | -8.615850e-47 |
| Msa0001830 | Msa1462470 | 0.807768 | 4.301984e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0001830 | MtrunA17_Chr8g0391921 | 98.500 | 200 | 1 | 1 | 1 | 200 | 28 | 225 | 5.60e-144 | 399 |
| Msa0001830 | MtrunA17_Chr8g0386721 | 71.856 | 167 | 46 | 1 | 34 | 199 | 1 | 167 | 4.65e-87 | 253 |
| Msa0001830 | MtrunA17_Chr1g0150061 | 66.049 | 162 | 55 | 0 | 38 | 199 | 75 | 236 | 1.43e-78 | 234 |
| Msa0001830 | MtrunA17_Chr8g0386731 | 65.823 | 158 | 54 | 0 | 40 | 197 | 12 | 169 | 1.20e-74 | 222 |
| Msa0001830 | MtrunA17_Chr7g0259611 | 59.524 | 168 | 65 | 1 | 30 | 197 | 3 | 167 | 2.05e-72 | 216 |
| Msa0001830 | MtrunA17_Chr5g0397561 | 63.816 | 152 | 54 | 1 | 40 | 190 | 10 | 161 | 3.73e-68 | 206 |
| Msa0001830 | MtrunA17_Chr1g0185791 | 57.233 | 159 | 67 | 1 | 41 | 198 | 11 | 169 | 3.73e-64 | 196 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0001830 | AT2G43350.2 | 67.553 | 188 | 60 | 1 | 14 | 200 | 19 | 206 | 5.37e-91 | 265 |
| Msa0001830 | AT2G43350.1 | 67.553 | 188 | 60 | 1 | 14 | 200 | 19 | 206 | 5.37e-91 | 265 |
| Msa0001830 | AT2G31570.1 | 73.780 | 164 | 43 | 0 | 34 | 197 | 1 | 164 | 4.26e-89 | 259 |
| Msa0001830 | AT4G11600.1 | 69.412 | 170 | 52 | 0 | 28 | 197 | 59 | 228 | 1.30e-86 | 255 |
| Msa0001830 | AT4G31870.1 | 68.519 | 162 | 51 | 0 | 38 | 199 | 72 | 233 | 1.79e-82 | 244 |
| Msa0001830 | AT2G25080.1 | 56.500 | 200 | 85 | 1 | 2 | 199 | 37 | 236 | 8.53e-78 | 233 |
| Msa0001830 | AT1G63460.1 | 60.479 | 167 | 66 | 0 | 34 | 200 | 1 | 167 | 7.75e-76 | 225 |
| Msa0001830 | AT3G63080.1 | 66.026 | 156 | 53 | 0 | 42 | 197 | 14 | 169 | 6.52e-74 | 221 |
| Msa0001830 | AT2G48150.1 | 62.048 | 166 | 63 | 0 | 35 | 200 | 5 | 170 | 2.08e-73 | 219 |
| Msa0001830 | AT2G48150.2 | 64.583 | 144 | 51 | 0 | 57 | 200 | 1 | 144 | 1.46e-65 | 198 |
| Msa0001830 | AT4G31870.2 | 63.333 | 60 | 22 | 0 | 40 | 99 | 74 | 133 | 1.86e-21 | 87.0 |
Find 55 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTATCCCTAGTTAATTTA+TGG | 0.119023 | 1_1:-3550239 | Msa0001830:three_prime_UTR |
| ACACACAGTTGTTGACTTTC+TGG | 0.139253 | 1_1:-3553259 | Msa0001830:CDS |
| ATGAATGAAGAATAAATAAA+TGG | 0.193238 | 1_1:-3553381 | Msa0001830:five_prime_UTR |
| GATCAGAAAGGAGGAATATT+TGG | 0.230959 | 1_1:-3551181 | Msa0001830:CDS |
| GTCTCTAGACTTTGAAATCT+TGG | 0.241499 | 1_1:-3551586 | Msa0001830:intron |
| ATTTGGTGTTCTCACTTTCT+TGG | 0.273903 | 1_1:-3550164 | Msa0001830:three_prime_UTR |
| AAACCATAAAGTTGCCAAAA+AGG | 0.285705 | 1_1:-3549818 | Msa0001830:three_prime_UTR |
| GACCTTGATCCTTATACTTC+TGG | 0.294629 | 1_1:+3551703 | None:intergenic |
| TTCTTAATATGTTGTGTACT+TGG | 0.314274 | 1_1:-3550207 | Msa0001830:three_prime_UTR |
| AATCTATTCAACGCTTTCAT+AGG | 0.337079 | 1_1:-3550288 | Msa0001830:three_prime_UTR |
| CAGAAACTCATCTTCCAAAA+TGG | 0.340181 | 1_1:-3553183 | Msa0001830:CDS |
| ATACTCTAAAATGATGTATC+AGG | 0.347204 | 1_1:-3550134 | Msa0001830:three_prime_UTR |
| ATCATGCAATAAGAACAATT+TGG | 0.356028 | 1_1:-3550181 | Msa0001830:three_prime_UTR |
| CTGGTTCCTGTCCACGAAAC+TGG | 0.374855 | 1_1:+3551550 | None:intergenic |
| AGTGAAATCGTAGATGGATT+TGG | 0.407313 | 1_1:+3553148 | None:intergenic |
| TGTTCTGTACCAGAAGTATA+AGG | 0.413755 | 1_1:-3551712 | Msa0001830:CDS |
| CAACATATTAAGAATCTTCC+AGG | 0.424766 | 1_1:+3550216 | None:intergenic |
| AGGAAGGGTAAAGTTTGCTT+GGG | 0.434431 | 1_1:-3549798 | Msa0001830:three_prime_UTR |
| AAGGAAGGGTAAAGTTTGCT+TGG | 0.435106 | 1_1:-3549799 | Msa0001830:three_prime_UTR |
| TATTATAGGTTGAAGTCAAT+GGG | 0.436019 | 1_1:-3551237 | Msa0001830:intron |
| TTATTATAGGTTGAAGTCAA+TGG | 0.438351 | 1_1:-3551238 | Msa0001830:intron |
| TGAATGAAGAATAAATAAAT+GGG | 0.447394 | 1_1:-3553380 | Msa0001830:five_prime_UTR |
| CTTGACAGTGAAATCGTAGA+TGG | 0.450016 | 1_1:+3553142 | None:intergenic |
| GTAATCACCTTATCAAAGAC+TGG | 0.452445 | 1_1:+3551474 | None:intergenic |
| TGAATTTCTTCACTAGATCC+TGG | 0.461518 | 1_1:+3551531 | None:intergenic |
| TGAATTCCCAGTCTTTGATA+AGG | 0.466937 | 1_1:-3551481 | Msa0001830:intron |
| TCTTATAATAATATAAAATA+CGG | 0.468552 | 1_1:-3553311 | Msa0001830:five_prime_UTR |
| TGTGAAATTGATTGATATCA+TGG | 0.476011 | 1_1:-3553282 | Msa0001830:exon |
| TCCCTAGTTAATTTATGGCC+TGG | 0.476360 | 1_1:-3550234 | Msa0001830:three_prime_UTR |
| ATGCAACCAGTTTCGTGGAC+AGG | 0.495715 | 1_1:-3551556 | Msa0001830:CDS |
| TTTCCATGCAACCAGTTTCG+TGG | 0.506265 | 1_1:-3551561 | Msa0001830:CDS |
| TTCCAGGCCATAAATTAACT+AGG | 0.521684 | 1_1:+3550232 | None:intergenic |
| AAGTTCTTAGTAAACAAAGA+AGG | 0.522522 | 1_1:-3551133 | Msa0001830:CDS |
| TACCAGAAGTATAAGGATCA+AGG | 0.527051 | 1_1:-3551705 | Msa0001830:intron |
| CAGTTTCGTGGACAGGAACC+AGG | 0.539854 | 1_1:-3551549 | Msa0001830:CDS |
| TTCAGAATGTTGTTTGCACA+AGG | 0.545993 | 1_1:-3551512 | Msa0001830:CDS |
| CTTAGTAAACAAAGAAGGGA+AGG | 0.552208 | 1_1:-3551128 | Msa0001830:CDS |
| ATACAGAGGAAAGGTTCTGC+TGG | 0.554671 | 1_1:-3552947 | Msa0001830:CDS |
| CATCTACGATTTCACTGTCA+AGG | 0.560391 | 1_1:-3553141 | Msa0001830:intron |
| TGTCCACGAAACTGGTTGCA+TGG | 0.566923 | 1_1:+3551558 | None:intergenic |
| TTCAACGCTTTCATAGGAGA+AGG | 0.573788 | 1_1:-3550282 | Msa0001830:three_prime_UTR |
| GAAATTAAGTTACCATTGTG+AGG | 0.576973 | 1_1:+3552912 | None:intergenic |
| AAGTCATCAATCAAGGGGAA+AGG | 0.577282 | 1_1:+3549854 | None:intergenic |
| AGTTCTTAGTAAACAAAGAA+GGG | 0.577714 | 1_1:-3551132 | Msa0001830:CDS |
| AAACAAAGAAGGGAAGGTTG+TGG | 0.578941 | 1_1:-3551122 | Msa0001830:CDS |
| AAAGGAGGAATATTTGGAGA+TGG | 0.590133 | 1_1:-3551175 | Msa0001830:CDS |
| TCCAGGCCATAAATTAACTA+GGG | 0.602709 | 1_1:+3550233 | None:intergenic |
| ACTAAACTCATATATTGCAA+AGG | 0.613180 | 1_1:-3550932 | Msa0001830:intron |
| TAATCACCTTATCAAAGACT+GGG | 0.624432 | 1_1:+3551475 | None:intergenic |
| CTACAATTGCAGGATATCAG+TGG | 0.631345 | 1_1:-3552991 | Msa0001830:intron |
| TCTGAGTCAATACAGAGGAA+AGG | 0.631545 | 1_1:-3552956 | Msa0001830:CDS |
| TATTTGGAGATGGTATCAAG+TGG | 0.648183 | 1_1:-3551165 | Msa0001830:CDS |
| CACCGCTCCTCTGAAAATCG+AGG | 0.662646 | 1_1:-3551083 | Msa0001830:intron |
| TTGTCAATGTTGCCTCACAA+TGG | 0.714648 | 1_1:-3552924 | Msa0001830:intron |
| GTGAGTCTGAGTCAATACAG+AGG | 0.737687 | 1_1:-3552961 | Msa0001830:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAAAAATTGTTTTTTGA+TGG | - | chr1_1:3550076-3550095 | Msa0001830:intron | 10.0% |
| !!! | TTAAAAAATTGTTTTTTGAT+GGG | - | chr1_1:3550077-3550096 | Msa0001830:intron | 10.0% |
| !! | AAAATATATATATGAACAAA+CGG | + | chr1_1:3550430-3550449 | None:intergenic | 10.0% |
| !!! | ATGATTGATTATAATTTTTT+TGG | - | chr1_1:3550529-3550548 | Msa0001830:intron | 10.0% |
| !!! | CTTTTTTTTTTTTTTTTTAC+AGG | - | chr1_1:3552837-3552856 | Msa0001830:intron | 10.0% |
| !! | ATGAATGAAGAATAAATAAA+TGG | - | chr1_1:3549775-3549794 | Msa0001830:three_prime_UTR | 15.0% |
| !! | TGAATGAAGAATAAATAAAT+GGG | - | chr1_1:3549776-3549795 | Msa0001830:three_prime_UTR | 15.0% |
| !! | TGAAAAAACATCAAAAAAAA+TGG | + | chr1_1:3550043-3550062 | None:intergenic | 15.0% |
| !!! | ACTTAATTTCATTCATTTTT+TGG | - | chr1_1:3550257-3550276 | Msa0001830:three_prime_UTR | 15.0% |
| !! | TAAATTAAAATATGTAGATC+AGG | + | chr1_1:3550314-3550333 | None:intergenic | 15.0% |
| !! | GTATATGAATTAAATCATAA+AGG | + | chr1_1:3550406-3550425 | None:intergenic | 15.0% |
| !!! | TTGTATTTTTGTTTTGTTTT+TGG | - | chr1_1:3551111-3551130 | Msa0001830:CDS | 15.0% |
| !! | ACAATTATAGTTATAGTTAT+AGG | + | chr1_1:3551368-3551387 | None:intergenic | 15.0% |
| !! | AAAGAATTTACAATAAATCA+TGG | + | chr1_1:3551707-3551726 | None:intergenic | 15.0% |
| !!! | TATCAAATAATGTATGTTTT+AGG | - | chr1_1:3552580-3552599 | Msa0001830:intron | 15.0% |
| !!! | GATTTTTATTCAGTAGTTAA+TGG | - | chr1_1:3550886-3550905 | Msa0001830:intron | 20.0% |
| !!! | ATTTTATGCTGTTTTGTTTT+TGG | - | chr1_1:3551035-3551054 | Msa0001830:intron | 20.0% |
| !!! | AAGTTATTAAGGAAATTTTG+CGG | - | chr1_1:3551153-3551172 | Msa0001830:CDS | 20.0% |
| !!! | TATTTTTTTGTTTTTGTCCT+TGG | + | chr1_1:3551490-3551509 | None:intergenic | 20.0% |
| !! | TTTGTAACTTATTTGACATT+TGG | - | chr1_1:3551724-3551743 | Msa0001830:CDS | 20.0% |
| !! | AAAAAACAGCATATACAATT+TGG | + | chr1_1:3551809-3551828 | None:intergenic | 20.0% |
| !! | AATATATATGCCAGTTTATA+TGG | - | chr1_1:3551874-3551893 | Msa0001830:intron | 20.0% |
| !! | AAAATGATTTCCATATAAAC+TGG | + | chr1_1:3551887-3551906 | None:intergenic | 20.0% |
| !!! | CATTTTTGTGCTTATATTTT+AGG | - | chr1_1:3552103-3552122 | Msa0001830:intron | 20.0% |
| !!! | AAATGCACATTTTATTCATT+TGG | - | chr1_1:3552350-3552369 | Msa0001830:intron | 20.0% |
| !! | AAAATATTTAGTTGTGGTAA+GGG | + | chr1_1:3552444-3552463 | None:intergenic | 20.0% |
| !! | ATAGTCAAAATATTTAGTTG+TGG | + | chr1_1:3552450-3552469 | None:intergenic | 20.0% |
| !! | TTGTGTTAGAAATTATCATA+TGG | - | chr1_1:3552515-3552534 | Msa0001830:intron | 20.0% |
| !!! | TTTTTTTTTTTTACAGGACA+TGG | - | chr1_1:3552843-3552862 | Msa0001830:intron | 20.0% |
| !! | ATTTATCCCTAGTTAATTTA+TGG | - | chr1_1:3552917-3552936 | Msa0001830:intron | 20.0% |
| !!! | TCATAAAAGTTGTTGATTTT+TGG | - | chr1_1:3553241-3553260 | Msa0001830:CDS | 20.0% |
| ! | TGTGAAATTGATTGATATCA+TGG | - | chr1_1:3549874-3549893 | Msa0001830:intron | 25.0% |
| ! | TGAATTAAATCATAAAGGAC+TGG | + | chr1_1:3550401-3550420 | None:intergenic | 25.0% |
| !! | AGTCAAACATTTTTAACGAT+AGG | + | chr1_1:3550478-3550497 | None:intergenic | 25.0% |
| ! | ATTAATCTTTCTCCATTAGT+AGG | - | chr1_1:3550824-3550843 | Msa0001830:intron | 25.0% |
| ! | TTAGAATCTGAACAAATAAC+AGG | + | chr1_1:3550853-3550872 | None:intergenic | 25.0% |
| ! | TGACATGAGATTTAAATCAA+TGG | - | chr1_1:3550928-3550947 | Msa0001830:intron | 25.0% |
| ! | AGTTATAGGACAGAATAAAA+TGG | + | chr1_1:3551354-3551373 | None:intergenic | 25.0% |
| !! | TTATTATAGGTTGAAGTCAA+TGG | - | chr1_1:3551918-3551937 | Msa0001830:intron | 25.0% |
| !! | TATTATAGGTTGAAGTCAAT+GGG | - | chr1_1:3551919-3551938 | Msa0001830:intron | 25.0% |
| ! | AAGTTCTTAGTAAACAAAGA+AGG | - | chr1_1:3552023-3552042 | Msa0001830:intron | 25.0% |
| ! | AGTTCTTAGTAAACAAAGAA+GGG | - | chr1_1:3552024-3552043 | Msa0001830:intron | 25.0% |
| !! | TATATGTTTCTTTTTGCAGA+AGG | - | chr1_1:3552170-3552189 | Msa0001830:intron | 25.0% |
| ! | ACTAAACTCATATATTGCAA+AGG | - | chr1_1:3552224-3552243 | Msa0001830:intron | 25.0% |
| ! | TATTGATCATCTAGAAGAAA+AGG | + | chr1_1:3552282-3552301 | None:intergenic | 25.0% |
| ! | CAAAATATTTAGTTGTGGTA+AGG | + | chr1_1:3552445-3552464 | None:intergenic | 25.0% |
| ! | AAAAAAAGAAGGAAGAAGTT+AGG | + | chr1_1:3552825-3552844 | None:intergenic | 25.0% |
| ! | TTCTTAATATGTTGTGTACT+TGG | - | chr1_1:3552949-3552968 | Msa0001830:CDS | 25.0% |
| ! | ATCATGCAATAAGAACAATT+TGG | - | chr1_1:3552975-3552994 | Msa0001830:CDS | 25.0% |
| !!! | ATACTCTAAAATGATGTATC+AGG | - | chr1_1:3553022-3553041 | Msa0001830:intron | 25.0% |
| !!! | GCACGTTATTTTATTTTACA+TGG | - | chr1_1:3553047-3553066 | Msa0001830:intron | 25.0% |
| !!! | TCTACTTTTCCTTTGAAAAT+TGG | - | chr1_1:3553212-3553231 | Msa0001830:CDS | 25.0% |
| !! | GATGGATTTGGATGAATTTT+CGG | + | chr1_1:3549999-3550018 | None:intergenic | 30.0% |
| !!! | ATTGTTTTTTGATGGGTCAA+TGG | - | chr1_1:3550084-3550103 | Msa0001830:three_prime_UTR | 30.0% |
| GAAATTAAGTTACCATTGTG+AGG | + | chr1_1:3550247-3550266 | None:intergenic | 30.0% | |
| GACAGATCATAATTGATTGA+TGG | + | chr1_1:3550456-3550475 | None:intergenic | 30.0% | |
| AATCACACAACATAATCCAT+AGG | + | chr1_1:3550662-3550681 | None:intergenic | 30.0% | |
| TTGATGTTTGAGAAATGTCA+TGG | - | chr1_1:3550713-3550732 | Msa0001830:intron | 30.0% | |
| ! | AAGAATACTTGCACAGTTTT+TGG | - | chr1_1:3550782-3550801 | Msa0001830:intron | 30.0% |
| CATGAGATTTAAATCAATGG+TGG | - | chr1_1:3550931-3550950 | Msa0001830:intron | 30.0% | |
| !!! | TTTGATCTGTTTTTGTTGCT+TGG | - | chr1_1:3550997-3551016 | Msa0001830:intron | 30.0% |
| !!! | TTATGCTGTTTTGTTTTTGG+TGG | - | chr1_1:3551038-3551057 | Msa0001830:intron | 30.0% |
| !! | TTTTTGCGTTGTTTTGTTCT+TGG | - | chr1_1:3551068-3551087 | Msa0001830:intron | 30.0% |
| !! | AATAACTTTTTCTAAGCCGA+AGG | + | chr1_1:3551141-3551160 | None:intergenic | 30.0% |
| CGGCTTAGAAAAAGTTATTA+AGG | - | chr1_1:3551142-3551161 | Msa0001830:CDS | 30.0% | |
| GGCTTCTTCAAAAAACAATT+GGG | - | chr1_1:3551174-3551193 | Msa0001830:CDS | 30.0% | |
| GCTTCTTCAAAAAACAATTG+GGG | - | chr1_1:3551175-3551194 | Msa0001830:CDS | 30.0% | |
| CTTCTTCAAAAAACAATTGG+GGG | - | chr1_1:3551176-3551195 | Msa0001830:CDS | 30.0% | |
| ATTCTAATTCATTGTTGCAG+CGG | - | chr1_1:3551391-3551410 | Msa0001830:intron | 30.0% | |
| TAATCACCTTATCAAAGACT+GGG | + | chr1_1:3551684-3551703 | None:intergenic | 30.0% | |
| ! | TTTTTGCAATGAATTCTGCA+AGG | - | chr1_1:3551836-3551855 | Msa0001830:intron | 30.0% |
| ! | ACCACTTTACAAGTTTTTGA+AGG | - | chr1_1:3551953-3551972 | Msa0001830:intron | 30.0% |
| TCCTTCAAAAACTTGTAAAG+TGG | + | chr1_1:3551957-3551976 | None:intergenic | 30.0% | |
| !! | AAGTTTTTGAAGGATCAGAA+AGG | - | chr1_1:3551963-3551982 | Msa0001830:intron | 30.0% |
| ATCTAGAAGAAAAGGAAAAG+AGG | + | chr1_1:3552274-3552293 | None:intergenic | 30.0% | |
| TTCTAGATGATCAATACTTG+TGG | - | chr1_1:3552286-3552305 | Msa0001830:intron | 30.0% | |
| TGTGTGTTTCATTGAAAAGA+GGG | + | chr1_1:3552408-3552427 | None:intergenic | 30.0% | |
| ACATTATTTGCTTGCATGAT+GGG | + | chr1_1:3552686-3552705 | None:intergenic | 30.0% | |
| AACATTATTTGCTTGCATGA+TGG | + | chr1_1:3552687-3552706 | None:intergenic | 30.0% | |
| TAGTTTCATTTAGATAGCGA+TGG | - | chr1_1:3552749-3552768 | Msa0001830:intron | 30.0% | |
| CTCTTAATCCACCATTTATT+TGG | - | chr1_1:3552775-3552794 | Msa0001830:intron | 30.0% | |
| GGAATGCATAAAATGAGAAA+GGG | + | chr1_1:3552804-3552823 | None:intergenic | 30.0% | |
| AGGAATGCATAAAATGAGAA+AGG | + | chr1_1:3552805-3552824 | None:intergenic | 30.0% | |
| AATCTATTCAACGCTTTCAT+AGG | - | chr1_1:3552868-3552887 | Msa0001830:intron | 30.0% | |
| CAACATATTAAGAATCTTCC+AGG | + | chr1_1:3552943-3552962 | None:intergenic | 30.0% | |
| !! | ACTTTTCCTTTGAAAATTGG+TGG | - | chr1_1:3553215-3553234 | Msa0001830:CDS | 30.0% |
| AAACCATAAAGTTGCCAAAA+AGG | - | chr1_1:3553338-3553357 | Msa0001830:five_prime_UTR | 30.0% | |
| ATAAAGTTGCCAAAAAGGAA+GGG | - | chr1_1:3553343-3553362 | Msa0001830:five_prime_UTR | 30.0% | |
| CAGAAACTCATCTTCCAAAA+TGG | - | chr1_1:3549973-3549992 | Msa0001830:intron | 35.0% | |
| ! | AGTGAAATCGTAGATGGATT+TGG | + | chr1_1:3550011-3550030 | None:intergenic | 35.0% |
| GTGATATGTACTACAATTGC+AGG | - | chr1_1:3550155-3550174 | Msa0001830:three_prime_UTR | 35.0% | |
| AATCATATGTGCGACTTTAG+AGG | + | chr1_1:3550515-3550534 | None:intergenic | 35.0% | |
| ATAGAATTGCGAAGTATAGC+TGG | - | chr1_1:3550634-3550653 | Msa0001830:intron | 35.0% | |
| !! | GCACAGTTTTTGGATTTATG+AGG | - | chr1_1:3550792-3550811 | Msa0001830:intron | 35.0% |
| AATAACAGGTCACCTACTAA+TGG | + | chr1_1:3550839-3550858 | None:intergenic | 35.0% | |
| TTACATCCTCTTGACTGTTT+GGG | - | chr1_1:3550954-3550973 | Msa0001830:exon | 35.0% | |
| !!! | TCTGTTTTTGTTGCTTGGTT+TGG | - | chr1_1:3551002-3551021 | Msa0001830:intron | 35.0% |
| ACAAAACAATTACCCACGAA+GGG | + | chr1_1:3551095-3551114 | None:intergenic | 35.0% | |
| TACAAAACAATTACCCACGA+AGG | + | chr1_1:3551096-3551115 | None:intergenic | 35.0% | |
| !!! | TTTTGTTTTTGGCACACCTT+CGG | - | chr1_1:3551122-3551141 | Msa0001830:CDS | 35.0% |
| CGGCTTCTTCAAAAAACAAT+TGG | - | chr1_1:3551173-3551192 | Msa0001830:CDS | 35.0% | |
| TGAGATTGGACTATCATATG+TGG | - | chr1_1:3551199-3551218 | Msa0001830:CDS | 35.0% | |
| GAGATTGGACTATCATATGT+GGG | - | chr1_1:3551200-3551219 | Msa0001830:CDS | 35.0% | |
| ! | TGTTCTGTACCAGAAGTATA+AGG | - | chr1_1:3551444-3551463 | Msa0001830:intron | 35.0% |
| ! | TACCAGAAGTATAAGGATCA+AGG | - | chr1_1:3551451-3551470 | Msa0001830:intron | 35.0% |
| TTTGTCCTTGGTTAAAGTCA+CGG | + | chr1_1:3551478-3551497 | None:intergenic | 35.0% | |
| !! | GTCTCTAGACTTTGAAATCT+TGG | - | chr1_1:3551570-3551589 | Msa0001830:CDS | 35.0% |
| TGAATTTCTTCACTAGATCC+TGG | + | chr1_1:3551628-3551647 | None:intergenic | 35.0% | |
| ! | TTCAGAATGTTGTTTGCACA+AGG | - | chr1_1:3551644-3551663 | Msa0001830:intron | 35.0% |
| TGAATTCCCAGTCTTTGATA+AGG | - | chr1_1:3551675-3551694 | Msa0001830:intron | 35.0% | |
| GTAATCACCTTATCAAAGAC+TGG | + | chr1_1:3551685-3551704 | None:intergenic | 35.0% | |
| CAGCATATACAATTTGGCTA+GGG | + | chr1_1:3551803-3551822 | None:intergenic | 35.0% | |
| ACAGCATATACAATTTGGCT+AGG | + | chr1_1:3551804-3551823 | None:intergenic | 35.0% | |
| !! | TTTTTGAAGGATCAGAAAGG+AGG | - | chr1_1:3551966-3551985 | Msa0001830:intron | 35.0% |
| GATCAGAAAGGAGGAATATT+TGG | - | chr1_1:3551975-3551994 | Msa0001830:intron | 35.0% | |
| AAAGGAGGAATATTTGGAGA+TGG | - | chr1_1:3551981-3552000 | Msa0001830:intron | 35.0% | |
| TATTTGGAGATGGTATCAAG+TGG | - | chr1_1:3551991-3552010 | Msa0001830:intron | 35.0% | |
| CTTAGTAAACAAAGAAGGGA+AGG | - | chr1_1:3552028-3552047 | Msa0001830:intron | 35.0% | |
| ! | TATCTAACCTCGATTTTCAG+AGG | + | chr1_1:3552083-3552102 | None:intergenic | 35.0% |
| !! | TTGTGCTTATATTTTAGGCC+AGG | - | chr1_1:3552108-3552127 | Msa0001830:intron | 35.0% |
| ! | AGGACATTGAGAAGCTTTTA+CGG | - | chr1_1:3552190-3552209 | Msa0001830:intron | 35.0% |
| GTGTGTGTTTCATTGAAAAG+AGG | + | chr1_1:3552409-3552428 | None:intergenic | 35.0% | |
| AGTTGTGGTAAGGGTTTATT+TGG | + | chr1_1:3552435-3552454 | None:intergenic | 35.0% | |
| ! | CATTCGCTATGACAGTATTT+TGG | + | chr1_1:3552542-3552561 | None:intergenic | 35.0% |
| CATTATTTGCTTGCATGATG+GGG | + | chr1_1:3552685-3552704 | None:intergenic | 35.0% | |
| AGAAAGGGCTTCCAAATAAA+TGG | + | chr1_1:3552789-3552808 | None:intergenic | 35.0% | |
| TCCAGGCCATAAATTAACTA+GGG | + | chr1_1:3552926-3552945 | None:intergenic | 35.0% | |
| TTCCAGGCCATAAATTAACT+AGG | + | chr1_1:3552927-3552946 | None:intergenic | 35.0% | |
| !! | ATTTGGTGTTCTCACTTTCT+TGG | - | chr1_1:3552992-3553011 | Msa0001830:intron | 35.0% |
| TCACATAGGTTGTCACAAAA+TGG | + | chr1_1:3553122-3553141 | None:intergenic | 35.0% | |
| GAGAGATAAAGTTGTCACAT+AGG | + | chr1_1:3553136-3553155 | None:intergenic | 35.0% | |
| ACTTTCTCTCTCTATTGCTT+TGG | - | chr1_1:3553175-3553194 | Msa0001830:CDS | 35.0% | |
| AGGAAAAGTAGATAGTGACA+CGG | + | chr1_1:3553204-3553223 | None:intergenic | 35.0% | |
| ! | TGACAACCACCAATTTTCAA+AGG | + | chr1_1:3553224-3553243 | None:intergenic | 35.0% |
| CGAAAAAGTCATCAATCAAG+GGG | + | chr1_1:3553310-3553329 | None:intergenic | 35.0% | |
| CCGAAAAAGTCATCAATCAA+GGG | + | chr1_1:3553311-3553330 | None:intergenic | 35.0% | |
| !! | CCCTTGATTGATGACTTTTT+CGG | - | chr1_1:3553308-3553327 | Msa0001830:five_prime_UTR | 35.0% |
| ACCGAAAAAGTCATCAATCA+AGG | + | chr1_1:3553312-3553331 | None:intergenic | 35.0% | |
| !! | CTTCCTTTTTGGCAACTTTA+TGG | + | chr1_1:3553344-3553363 | None:intergenic | 35.0% |
| CATAAAGTTGCCAAAAAGGA+AGG | - | chr1_1:3553342-3553361 | Msa0001830:five_prime_UTR | 35.0% | |
| ! | CAAACTTTACCCTTCCTTTT+TGG | + | chr1_1:3553355-3553374 | None:intergenic | 35.0% |
| !! | ACACACAGTTGTTGACTTTC+TGG | - | chr1_1:3549897-3549916 | Msa0001830:intron | 40.0% |
| ! | GGATGAATTTTCGGCCATTT+TGG | + | chr1_1:3549990-3550009 | None:intergenic | 40.0% |
| CTTGACAGTGAAATCGTAGA+TGG | + | chr1_1:3550017-3550036 | None:intergenic | 40.0% | |
| CATCTACGATTTCACTGTCA+AGG | - | chr1_1:3550015-3550034 | Msa0001830:intron | 40.0% | |
| CTACAATTGCAGGATATCAG+TGG | - | chr1_1:3550165-3550184 | Msa0001830:three_prime_UTR | 40.0% | |
| TCTGAGTCAATACAGAGGAA+AGG | - | chr1_1:3550200-3550219 | Msa0001830:three_prime_UTR | 40.0% | |
| TTGTCAATGTTGCCTCACAA+TGG | - | chr1_1:3550232-3550251 | Msa0001830:three_prime_UTR | 40.0% | |
| GTTACATCCTCTTGACTGTT+TGG | - | chr1_1:3550953-3550972 | Msa0001830:exon | 40.0% | |
| !!! | GTTTTTGTTGCTTGGTTTGG+AGG | - | chr1_1:3551005-3551024 | Msa0001830:intron | 40.0% |
| CAAAACAATTACCCACGAAG+GGG | + | chr1_1:3551094-3551113 | None:intergenic | 40.0% | |
| AAAACAATTGGGGGTGAGAT+TGG | - | chr1_1:3551185-3551204 | Msa0001830:CDS | 40.0% | |
| ATCTGACACTGTAAAGCCTT+AGG | - | chr1_1:3551237-3551256 | Msa0001830:intron | 40.0% | |
| ! | TTGCTTTGGCTTAGATCCTA+AGG | + | chr1_1:3551256-3551275 | None:intergenic | 40.0% |
| CAACAAAGAAGTCGTTGCTT+TGG | + | chr1_1:3551270-3551289 | None:intergenic | 40.0% | |
| CAAAGCAACGACTTCTTTGT+TGG | - | chr1_1:3551268-3551287 | Msa0001830:intron | 40.0% | |
| GACCTTGATCCTTATACTTC+TGG | + | chr1_1:3551456-3551475 | None:intergenic | 40.0% | |
| GTTTGGACTCTCGATATACT+TGG | - | chr1_1:3551771-3551790 | Msa0001830:intron | 40.0% | |
| AAACAAAGAAGGGAAGGTTG+TGG | - | chr1_1:3552034-3552053 | Msa0001830:intron | 40.0% | |
| TACTGTCATAGCGAATGTGT+TGG | - | chr1_1:3552545-3552564 | Msa0001830:intron | 40.0% | |
| ACTGTCATAGCGAATGTGTT+GGG | - | chr1_1:3552546-3552565 | Msa0001830:intron | 40.0% | |
| GACTCAATTGTGCAGTGTAT+TGG | + | chr1_1:3552656-3552675 | None:intergenic | 40.0% | |
| GACGAAGAAATAGAATAGCG+CGG | + | chr1_1:3552728-3552747 | None:intergenic | 40.0% | |
| AAGGGCTTCCAAATAAATGG+TGG | + | chr1_1:3552786-3552805 | None:intergenic | 40.0% | |
| TTCAACGCTTTCATAGGAGA+AGG | - | chr1_1:3552874-3552893 | Msa0001830:intron | 40.0% | |
| TCCCTAGTTAATTTATGGCC+TGG | - | chr1_1:3552922-3552941 | Msa0001830:intron | 40.0% | |
| AAGTCATCAATCAAGGGGAA+AGG | + | chr1_1:3553305-3553324 | None:intergenic | 40.0% | |
| ! | AAGGAAGGGTAAAGTTTGCT+TGG | - | chr1_1:3553357-3553376 | Msa0001830:five_prime_UTR | 40.0% |
| ! | AGGAAGGGTAAAGTTTGCTT+GGG | - | chr1_1:3553358-3553377 | Msa0001830:five_prime_UTR | 40.0% |
| GTGAGTCTGAGTCAATACAG+AGG | - | chr1_1:3550195-3550214 | Msa0001830:three_prime_UTR | 45.0% | |
| ATACAGAGGAAAGGTTCTGC+TGG | - | chr1_1:3550209-3550228 | Msa0001830:three_prime_UTR | 45.0% | |
| ! | CATATGTGCGACTTTAGAGG+TGG | + | chr1_1:3550512-3550531 | None:intergenic | 45.0% |
| AAGGTCCGTGACTTTAACCA+AGG | - | chr1_1:3551470-3551489 | Msa0001830:intron | 45.0% | |
| TTTCCATGCAACCAGTTTCG+TGG | - | chr1_1:3551595-3551614 | Msa0001830:intron | 45.0% | |
| ! | AACCTCGATTTTCAGAGGAG+CGG | + | chr1_1:3552078-3552097 | None:intergenic | 45.0% |
| GCACAACGTACATAGAAACC+TGG | + | chr1_1:3552129-3552148 | None:intergenic | 45.0% | |
| !! | TCTTATAATAATATAAAATA+CGG | - | chr1_1:3549845-3549864 | Msa0001830:three_prime_UTR | 5.0% |
| !! | TTAATATATCAAATTATTAT+AGG | - | chr1_1:3551905-3551924 | Msa0001830:intron | 5.0% |
| !! | TAAAAAAAAAAAAAAAAAGA+AGG | + | chr1_1:3552836-3552855 | None:intergenic | 5.0% |
| CGAAGTATAGCTGGCACCTA+TGG | - | chr1_1:3550643-3550662 | Msa0001830:intron | 50.0% | |
| TACGCACCCAAACAGTCAAG+AGG | + | chr1_1:3550963-3550982 | None:intergenic | 50.0% | |
| TTGACTGTTTGGGTGCGTAG+AGG | - | chr1_1:3550964-3550983 | Msa0001830:CDS | 50.0% | |
| TTTGGGTGCGTAGAGGTTTG+TGG | - | chr1_1:3550971-3550990 | Msa0001830:intron | 50.0% | |
| ! | TTTTGTTCTTGGCCCCTTCG+TGG | - | chr1_1:3551079-3551098 | Msa0001830:intron | 50.0% |
| TTTGTTCTTGGCCCCTTCGT+GGG | - | chr1_1:3551080-3551099 | Msa0001830:intron | 50.0% | |
| TGTCCACGAAACTGGTTGCA+TGG | + | chr1_1:3551601-3551620 | None:intergenic | 50.0% | |
| ATGCAACCAGTTTCGTGGAC+AGG | - | chr1_1:3551600-3551619 | Msa0001830:intron | 50.0% | |
| GACATTTGGCACACTATGCG+TGG | - | chr1_1:3551738-3551757 | Msa0001830:CDS | 50.0% | |
| !! | TGCGTGGAGATGGTCTTGTT+TGG | - | chr1_1:3551754-3551773 | Msa0001830:intron | 50.0% |
| ! | ATTTTCAGAGGAGCGGTGGT+AGG | + | chr1_1:3552071-3552090 | None:intergenic | 50.0% |
| ! | TTGCTTGCATGATGGGGAGT+GGG | + | chr1_1:3552679-3552698 | None:intergenic | 50.0% |
| ! | TTTGCTTGCATGATGGGGAG+TGG | + | chr1_1:3552680-3552699 | None:intergenic | 50.0% |
| CTGGTTCCTGTCCACGAAAC+TGG | + | chr1_1:3551609-3551628 | None:intergenic | 55.0% | |
| CAGTTTCGTGGACAGGAACC+AGG | - | chr1_1:3551607-3551626 | Msa0001830:intron | 55.0% | |
| TGGCACACTATGCGTGGAGA+TGG | - | chr1_1:3551744-3551763 | Msa0001830:CDS | 55.0% | |
| ! | CTCGATTTTCAGAGGAGCGG+TGG | + | chr1_1:3552075-3552094 | None:intergenic | 55.0% |
| ! | CACCGCTCCTCTGAAAATCG+AGG | - | chr1_1:3552073-3552092 | Msa0001830:intron | 55.0% |
| ! | TGCTTGCATGATGGGGAGTG+GGG | + | chr1_1:3552678-3552697 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 3549773 | 3553405 | 3549773 | ID=Msa0001830;Name=Msa0001830 |
| chr1_1 | mRNA | 3549773 | 3553405 | 3549773 | ID=Msa0001830-mRNA-1;Parent=Msa0001830;Name=Msa0001830-mRNA-1;_AED=0.07;_eAED=0.07;_QI=120|1|1|1|0.71|0.62|8|377|200 |
| chr1_1 | exon | 3549773 | 3549889 | 3549773 | ID=Msa0001830-mRNA-1:exon:1029;Parent=Msa0001830-mRNA-1 |
| chr1_1 | exon | 3550084 | 3550319 | 3550084 | ID=Msa0001830-mRNA-1:exon:1028;Parent=Msa0001830-mRNA-1 |
| chr1_1 | exon | 3550933 | 3550989 | 3550933 | ID=Msa0001830-mRNA-1:exon:1027;Parent=Msa0001830-mRNA-1 |
| chr1_1 | exon | 3551084 | 3551251 | 3551084 | ID=Msa0001830-mRNA-1:exon:1026;Parent=Msa0001830-mRNA-1 |
| chr1_1 | exon | 3551482 | 3551600 | 3551482 | ID=Msa0001830-mRNA-1:exon:1025;Parent=Msa0001830-mRNA-1 |
| chr1_1 | exon | 3551706 | 3551767 | 3551706 | ID=Msa0001830-mRNA-1:exon:1024;Parent=Msa0001830-mRNA-1 |
| chr1_1 | exon | 3552925 | 3553001 | 3552925 | ID=Msa0001830-mRNA-1:exon:1023;Parent=Msa0001830-mRNA-1 |
| chr1_1 | exon | 3553142 | 3553405 | 3553142 | ID=Msa0001830-mRNA-1:exon:1022;Parent=Msa0001830-mRNA-1 |
| chr1_1 | five_prime_UTR | 3553286 | 3553405 | 3553286 | ID=Msa0001830-mRNA-1:five_prime_utr;Parent=Msa0001830-mRNA-1 |
| chr1_1 | CDS | 3553142 | 3553285 | 3553142 | ID=Msa0001830-mRNA-1:cds;Parent=Msa0001830-mRNA-1 |
| chr1_1 | CDS | 3552925 | 3553001 | 3552925 | ID=Msa0001830-mRNA-1:cds;Parent=Msa0001830-mRNA-1 |
| chr1_1 | CDS | 3551706 | 3551767 | 3551706 | ID=Msa0001830-mRNA-1:cds;Parent=Msa0001830-mRNA-1 |
| chr1_1 | CDS | 3551482 | 3551600 | 3551482 | ID=Msa0001830-mRNA-1:cds;Parent=Msa0001830-mRNA-1 |
| chr1_1 | CDS | 3551084 | 3551251 | 3551084 | ID=Msa0001830-mRNA-1:cds;Parent=Msa0001830-mRNA-1 |
| chr1_1 | CDS | 3550957 | 3550989 | 3550957 | ID=Msa0001830-mRNA-1:cds;Parent=Msa0001830-mRNA-1 |
| chr1_1 | three_prime_UTR | 3550933 | 3550956 | 3550933 | ID=Msa0001830-mRNA-1:three_prime_utr;Parent=Msa0001830-mRNA-1 |
| chr1_1 | three_prime_UTR | 3550084 | 3550319 | 3550084 | ID=Msa0001830-mRNA-1:three_prime_utr;Parent=Msa0001830-mRNA-1 |
| chr1_1 | three_prime_UTR | 3549773 | 3549889 | 3549773 | ID=Msa0001830-mRNA-1:three_prime_utr;Parent=Msa0001830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
