Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0351430 | XP_013459093.2 | 97.858 | 607 | 12 | 1 | 1 | 606 | 1 | 607 | 0.0 | 1192 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0351430 | sp|Q9FNQ0|VIP4_ARATH | 53.386 | 635 | 247 | 18 | 5 | 605 | 5 | 624 | 1.40e-148 | 446 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0351430 | A0A396IKI1 | 97.858 | 607 | 12 | 1 | 1 | 606 | 1 | 607 | 0.0 | 1192 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0351430 | Msa0351470 | 0.968542 | 7.972675e-129 | -8.615850e-47 |
| Msa0351430 | Msa1175100 | 0.805884 | 1.075912e-49 | -8.615850e-47 |
| Msa0351430 | Msa1234470 | 0.822700 | 2.058263e-53 | -8.615850e-47 |
| Msa0351430 | Msa1306960 | 0.806851 | 6.729720e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0351430 | MtrunA17_Chr3g0086581 | 97.858 | 607 | 12 | 1 | 1 | 606 | 1 | 607 | 0.0 | 1192 |
| Msa0351430 | MtrunA17_Chr3g0086571 | 97.529 | 607 | 14 | 1 | 1 | 606 | 1 | 607 | 0.0 | 1187 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0351430 | AT5G61150.2 | 53.555 | 633 | 247 | 18 | 5 | 605 | 5 | 622 | 6.28e-150 | 446 |
| Msa0351430 | AT5G61150.1 | 53.386 | 635 | 247 | 18 | 5 | 605 | 5 | 624 | 1.42e-149 | 446 |
Find 178 sgRNAs with CRISPR-Local
Find 558 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGATGGGTTGTTGGTTTCTT+AGG | 0.176435 | 3_1:+18169371 | None:intergenic |
| ACCTTTGTAACTGATGAATT+TGG | 0.177630 | 3_1:-18172437 | Msa0351430:CDS |
| CTTTGATACTTTACAATATA+TGG | 0.179403 | 3_1:-18168816 | Msa0351430:three_prime_UTR |
| AGGATCTTGCAATTGGAATT+TGG | 0.188152 | 3_1:-18168995 | Msa0351430:three_prime_UTR |
| TGATGATGAAGAGGAGGATA+TGG | 0.211401 | 3_1:-18173241 | Msa0351430:CDS |
| TGCTTCTTCTTCTATAATTC+AGG | 0.215111 | 3_1:-18169015 | Msa0351430:three_prime_UTR |
| TCTTCTTCTTCATATGTTCT+AGG | 0.236300 | 3_1:+18172461 | None:intergenic |
| GACTCTTCTCTCTCATCATC+TGG | 0.245899 | 3_1:+18170638 | None:intergenic |
| ATTCTGATCTTTGTCATCTC+TGG | 0.249219 | 3_1:+18173311 | None:intergenic |
| GTTCTAGGATCAAATGGTTT+TGG | 0.256215 | 3_1:+18172476 | None:intergenic |
| AACGACATCCCTACGCTTAC+TGG | 0.260769 | 3_1:+18175515 | None:intergenic |
| CAAAAGAGTAAGAATTTAAA+AGG | 0.287582 | 3_1:-18169440 | Msa0351430:CDS |
| AATTCACCTTTCCATGTCTA+AGG | 0.291409 | 3_1:+18171518 | None:intergenic |
| AACACAAGGCAGACCTTTCC+TGG | 0.291986 | 3_1:+18172908 | None:intergenic |
| CCGGAAATTCGTGATGTATT+TGG | 0.297525 | 3_1:-18173270 | Msa0351430:CDS |
| CCAAATACATCACGAATTTC+CGG | 0.297709 | 3_1:+18173270 | None:intergenic |
| AGGCTGAAAGTCAGACTATC+AGG | 0.307554 | 3_1:-18171169 | Msa0351430:CDS |
| GGCTTACGAGGGATGCTCTT+TGG | 0.310503 | 3_1:+18170707 | None:intergenic |
| TGGATCAACTCCCATGATAT+TGG | 0.314016 | 3_1:+18172496 | None:intergenic |
| ACGCTGATTGTAATCATCTT+TGG | 0.335207 | 3_1:+18175545 | None:intergenic |
| CAAAGATCAGAATCATGATT+TGG | 0.338229 | 3_1:-18173301 | Msa0351430:CDS |
| TTTCTACGCTCTCTCTGTTT+GGG | 0.341598 | 3_1:+18176028 | None:intergenic |
| ATAATTCAGGATCTTGCAAT+TGG | 0.359118 | 3_1:-18169002 | Msa0351430:three_prime_UTR |
| AGGAGGCGTCAACTTTCTCC+TGG | 0.360444 | 3_1:-18171086 | Msa0351430:CDS |
| GGAAGCCTTCAGTTATTGAT+TGG | 0.366509 | 3_1:-18171598 | Msa0351430:CDS |
| TGAAGGAGAAGTTGAGGGGC+AGG | 0.380719 | 3_1:-18175667 | Msa0351430:CDS |
| GATGATGAAGAGGAGGATAT+GGG | 0.386378 | 3_1:-18173240 | Msa0351430:CDS |
| CGTCCACCACCAGCTCTTCC+AGG | 0.388905 | 3_1:-18172926 | Msa0351430:CDS |
| AGAAGTTGAGGGGCAGGGAG+AGG | 0.401701 | 3_1:-18175661 | Msa0351430:CDS |
| GTTTAAAGTTTCCAATATCA+TGG | 0.404176 | 3_1:-18172507 | Msa0351430:CDS |
| AGTGAAGGTGAGAGAGAGGT+TGG | 0.405162 | 3_1:-18175621 | Msa0351430:CDS |
| CTTACAGATGTTGTGCCATC+AGG | 0.408963 | 3_1:+18172356 | None:intergenic |
| ATATGTTGTAAAATATTGTA+AGG | 0.416641 | 3_1:+18168849 | None:intergenic |
| GCAGGATGAAGGAGAGGGAG+GGG | 0.417436 | 3_1:-18175712 | Msa0351430:intron |
| CAAATACATCACGAATTTCC+GGG | 0.420870 | 3_1:+18173271 | None:intergenic |
| GTCATCCGGCGATGGGTTGT+TGG | 0.424310 | 3_1:+18169362 | None:intergenic |
| AAAGGCCTCGTTCTCGTATG+AGG | 0.428907 | 3_1:-18170583 | Msa0351430:CDS |
| TTGAGGATTGGATTCATGTT+CGG | 0.429047 | 3_1:+18175922 | None:intergenic |
| ATTCCTCAGCTGGGTTCCCT+TGG | 0.430591 | 3_1:+18168884 | None:intergenic |
| TTCTGATCTTTGTCATCTCT+GGG | 0.431966 | 3_1:+18173312 | None:intergenic |
| TACAGAATTGAGTTGAGGAT+TGG | 0.437265 | 3_1:+18175910 | None:intergenic |
| TCATATGTTCTAGGATCAAA+TGG | 0.439874 | 3_1:+18172470 | None:intergenic |
| GATGAAGGAGAGGGAGGGGT+AGG | 0.441542 | 3_1:-18175708 | Msa0351430:CDS |
| GGAAGAAGAGAGTGAAGGTA+GGG | 0.445901 | 3_1:-18175586 | Msa0351430:CDS |
| TCATAATCCGTTTCTCTGCT+CGG | 0.449720 | 3_1:+18170832 | None:intergenic |
| TGGATCTGATGATGATGAAC+AGG | 0.450572 | 3_1:-18175487 | Msa0351430:CDS |
| TGGAAGAAGAGAGTGAAGGT+AGG | 0.450961 | 3_1:-18175587 | Msa0351430:CDS |
| GAAGCCTTCAGTTATTGATT+GGG | 0.452323 | 3_1:-18171597 | Msa0351430:CDS |
| AAAGCAATGCTCGCTTTGTA+AGG | 0.456005 | 3_1:-18171630 | Msa0351430:CDS |
| GGAGAAAGAAGAAAAGGAAA+AGG | 0.456578 | 3_1:-18171268 | Msa0351430:intron |
| CTGGGTAACCCACTTGGTGC+CGG | 0.457697 | 3_1:+18170657 | None:intergenic |
| TGCTCTTGTATTTCTAATGA+CGG | 0.458635 | 3_1:-18168963 | Msa0351430:three_prime_UTR |
| GAGGGTGAAGGAGAAGTTGA+GGG | 0.462675 | 3_1:-18175672 | Msa0351430:CDS |
| TGAGAGGGAGAAAGAAGAAA+AGG | 0.465807 | 3_1:-18171274 | Msa0351430:CDS |
| AGAAGAGAGTGAAGGTAGGG+GGG | 0.466996 | 3_1:-18175583 | Msa0351430:CDS |
| AAGGGGTTTGATTCTGATGA+AGG | 0.470795 | 3_1:-18169404 | Msa0351430:CDS |
| AGAGAGTGAAGGTGAGAGAG+AGG | 0.471012 | 3_1:-18175625 | Msa0351430:CDS |
| AAGTTCATCTTCTTCCTCCT+CGG | 0.471897 | 3_1:+18175949 | None:intergenic |
| AGAACAAGAAAATGATGCTT+CGG | 0.474694 | 3_1:-18170510 | Msa0351430:CDS |
| CATCATCTGGGTAACCCACT+TGG | 0.477731 | 3_1:+18170651 | None:intergenic |
| TACAATATATGGATTAAAAG+AGG | 0.480504 | 3_1:-18168805 | Msa0351430:three_prime_UTR |
| TACGCTCTCTCTGTTTGGGT+GGG | 0.484409 | 3_1:+18176032 | None:intergenic |
| GAAGAAGAGAGTGAAGGTAG+GGG | 0.484413 | 3_1:-18175585 | Msa0351430:CDS |
| CCTTGTCGTCGAATTCTCAT+CGG | 0.488466 | 3_1:-18171371 | Msa0351430:CDS |
| TTCATCAGCAAGTATATCCT+CGG | 0.493150 | 3_1:+18173039 | None:intergenic |
| AGAGGGTGAAGGAGAAGTTG+AGG | 0.494925 | 3_1:-18175673 | Msa0351430:CDS |
| AAGAAGAGAGTGAAGGTAGG+GGG | 0.497291 | 3_1:-18175584 | Msa0351430:CDS |
| CAGATGATGCAGAATCTCTT+CGG | 0.498212 | 3_1:-18175980 | Msa0351430:CDS |
| CGTAGGGATGTCGTTGAAAG+TGG | 0.500557 | 3_1:-18175507 | Msa0351430:CDS |
| TATGGGGTACGCAGCTCAGC+AGG | 0.501010 | 3_1:-18173223 | Msa0351430:CDS |
| TGGGTAACCCACTTGGTGCC+GGG | 0.501264 | 3_1:+18170658 | None:intergenic |
| ACATAATTGTCATCCGGCGA+TGG | 0.502431 | 3_1:+18169354 | None:intergenic |
| TTTAGAGGATGCTTTGGATG+AGG | 0.502707 | 3_1:-18171060 | Msa0351430:intron |
| CTACGCTCTCTCTGTTTGGG+TGG | 0.502714 | 3_1:+18176031 | None:intergenic |
| GATATACTGCGGAGGAGGAA+GGG | 0.503732 | 3_1:-18173084 | Msa0351430:CDS |
| TAAGCCACTTGGGCCACCAT+TGG | 0.504404 | 3_1:-18172966 | Msa0351430:CDS |
| TTGCAGGATGAAGGAGAGGG+AGG | 0.504951 | 3_1:-18175714 | Msa0351430:intron |
| TCTTACCCGTAAGCGCGAAA+AGG | 0.506454 | 3_1:-18171135 | Msa0351430:CDS |
| GTTGTTGGTTTCTTAGGAGG+AGG | 0.507805 | 3_1:+18169377 | None:intergenic |
| TTTAAAGTTTCCAATATCAT+GGG | 0.510569 | 3_1:-18172506 | Msa0351430:CDS |
| GGGTGGGAAAAGTGAAGAGA+AGG | 0.510570 | 3_1:+18176048 | None:intergenic |
| TGCAGGATGAAGGAGAGGGA+GGG | 0.511951 | 3_1:-18175713 | Msa0351430:intron |
| TCCAAATTCATCAGTTACAA+AGG | 0.512124 | 3_1:+18172436 | None:intergenic |
| CGCTTTGTAAGGTGGTCTGA+TGG | 0.512150 | 3_1:-18171619 | Msa0351430:CDS |
| AGATATACTGCGGAGGAGGA+AGG | 0.512709 | 3_1:-18173085 | Msa0351430:CDS |
| GGTAGGGCAAGAAGTTGAAG+AGG | 0.514949 | 3_1:-18175691 | Msa0351430:CDS |
| AAAGATGTGCTTGATCATGC+TGG | 0.515881 | 3_1:+18171542 | None:intergenic |
| CAGAAGTCCGAGCAGAGAAA+CGG | 0.518664 | 3_1:-18170839 | Msa0351430:CDS |
| ACGGATTATGAATGCTAAGA+AGG | 0.519536 | 3_1:-18170820 | Msa0351430:intron |
| AAACAAGAAGCGCATACGCT+TGG | 0.520008 | 3_1:-18172414 | Msa0351430:CDS |
| ATGAAGGAGAGGGAGGGGTA+GGG | 0.523344 | 3_1:-18175707 | Msa0351430:CDS |
| ACCTTTCCTGGAAGAGCTGG+TGG | 0.524128 | 3_1:+18172920 | None:intergenic |
| AGAGGTTGGTGATCAGAGAG+TGG | 0.525201 | 3_1:-18175607 | Msa0351430:CDS |
| GAAGGAGAAGTTGAGGGGCA+GGG | 0.526782 | 3_1:-18175666 | Msa0351430:CDS |
| ACTCTTCTCTCTCATCATCT+GGG | 0.528829 | 3_1:+18170639 | None:intergenic |
| CAGACCTTTCCTGGAAGAGC+TGG | 0.530664 | 3_1:+18172917 | None:intergenic |
| AATCACAAGGACAACTATCA+AGG | 0.532097 | 3_1:-18171416 | Msa0351430:CDS |
| TTTCCTGGAAGAGCTGGTGG+TGG | 0.533508 | 3_1:+18172923 | None:intergenic |
| TGGGTTGTTGGTTTCTTAGG+AGG | 0.534824 | 3_1:+18169374 | None:intergenic |
| TCATGATTTGGATTCTGCCC+CGG | 0.536557 | 3_1:-18173289 | Msa0351430:CDS |
| AGAATTCGACGACAAGGAAG+AGG | 0.537175 | 3_1:+18171377 | None:intergenic |
| AGTTGACGCCTCCTCTCAGT+TGG | 0.539785 | 3_1:+18171095 | None:intergenic |
| GAGTAAGAATTTAAAAGGCA+AGG | 0.540581 | 3_1:-18169435 | Msa0351430:CDS |
| TAACTGCAATTGTTGACTCA+AGG | 0.540824 | 3_1:-18171344 | Msa0351430:CDS |
| TGAGGCAGAATATGAGGATG+AGG | 0.541830 | 3_1:-18170549 | Msa0351430:CDS |
| AGTTCTTGACATATCTGAGC+AGG | 0.543098 | 3_1:-18171569 | Msa0351430:CDS |
| GGTGGGAAAAGTGAAGAGAA+GGG | 0.544645 | 3_1:+18176049 | None:intergenic |
| ATGATGAAGAGGAGGATATG+GGG | 0.546074 | 3_1:-18173239 | Msa0351430:CDS |
| AGAACAATATTGTACGTTGG+AGG | 0.547091 | 3_1:-18172391 | Msa0351430:CDS |
| GGAGGCGTCAACTTTCTCCT+GGG | 0.547641 | 3_1:-18171085 | Msa0351430:CDS |
| TGTCAGACATAATTGTCATC+CGG | 0.549082 | 3_1:+18169348 | None:intergenic |
| GGTATTGCAGGATGAAGGAG+AGG | 0.549776 | 3_1:-18175718 | Msa0351430:intron |
| CACAAGTTCTAAGCTCAAAA+CGG | 0.552860 | 3_1:-18176084 | Msa0351430:five_prime_UTR |
| AGAAAATGATGCTTCGGATG+AGG | 0.553139 | 3_1:-18170504 | Msa0351430:CDS |
| AACTCCAATGGTGGCCCAAG+TGG | 0.555431 | 3_1:+18172962 | None:intergenic |
| CAAGAAGTTGAAGAGGGTGA+AGG | 0.556138 | 3_1:-18175684 | Msa0351430:CDS |
| TGATTCTGAGGCAGAATATG+AGG | 0.556925 | 3_1:-18170555 | Msa0351430:CDS |
| GGGAGGAACGATGGCTTACG+AGG | 0.557278 | 3_1:+18170695 | None:intergenic |
| GTAGAGATATACTGCGGAGG+AGG | 0.561855 | 3_1:-18173089 | Msa0351430:intron |
| TCCCACCAGCAAAATCCTCC+CGG | 0.563107 | 3_1:-18170676 | Msa0351430:CDS |
| AATCTTACAGAATTGAGTTG+AGG | 0.563407 | 3_1:+18175905 | None:intergenic |
| GAAGAAGAAGCAGAGAGTGA+AGG | 0.568085 | 3_1:-18175636 | Msa0351430:CDS |
| ACCACCAGCTCTTCCAGGAA+AGG | 0.568476 | 3_1:-18172921 | Msa0351430:intron |
| CGTTCCCAATCAATAACTGA+AGG | 0.569620 | 3_1:+18171593 | None:intergenic |
| GTAAGCGCGAAAAGGTGAAT+CGG | 0.570993 | 3_1:-18171127 | Msa0351430:CDS |
| CATAATTGTCATCCGGCGAT+GGG | 0.575485 | 3_1:+18169355 | None:intergenic |
| TCATCAGCAAGTATATCCTC+GGG | 0.580662 | 3_1:+18173040 | None:intergenic |
| AAGACGACGAGGAAGAAGAA+AGG | 0.582425 | 3_1:-18170601 | Msa0351430:CDS |
| AAAACTAAAGATAAGCCACT+TGG | 0.583846 | 3_1:-18172977 | Msa0351430:CDS |
| TTTGCTGGTGGGAGGAACGA+TGG | 0.583979 | 3_1:+18170686 | None:intergenic |
| AGAGCATCAGTATGAATCAG+AGG | 0.587246 | 3_1:-18173017 | Msa0351430:CDS |
| TGTTGACTCAAGGCAAAGGA+AGG | 0.588843 | 3_1:-18171334 | Msa0351430:CDS |
| GTATTGCAGGATGAAGGAGA+GGG | 0.588913 | 3_1:-18175717 | Msa0351430:intron |
| AGAAACCAACAACCCATCGC+CGG | 0.595963 | 3_1:-18169367 | Msa0351430:CDS |
| AGGGTGAAGGAGAAGTTGAG+GGG | 0.595987 | 3_1:-18175671 | Msa0351430:CDS |
| AGAGTGGAAGAAGAGAGTGA+AGG | 0.597932 | 3_1:-18175591 | Msa0351430:CDS |
| GTAGGGCAAGAAGTTGAAGA+GGG | 0.600226 | 3_1:-18175690 | Msa0351430:CDS |
| AAGGCCTCGTTCTCGTATGA+GGG | 0.602890 | 3_1:-18170582 | Msa0351430:CDS |
| AAAATCCTCCCGGCACCAAG+TGG | 0.609142 | 3_1:-18170666 | Msa0351430:CDS |
| AACACAGCGTCACTATGAAG+AGG | 0.611539 | 3_1:-18170871 | Msa0351430:CDS |
| TATGTTGTAAAATATTGTAA+GGG | 0.611877 | 3_1:+18168850 | None:intergenic |
| CAGGGAATTCTGCAATCACA+AGG | 0.612303 | 3_1:-18171429 | Msa0351430:CDS |
| AGTGGAATTTCTAACTCCAA+TGG | 0.614685 | 3_1:+18172950 | None:intergenic |
| GCAATGCTCGCTTTGTAAGG+TGG | 0.615936 | 3_1:-18171627 | Msa0351430:CDS |
| TTTATGGAATTCTAGTCACA+GGG | 0.616797 | 3_1:-18170731 | Msa0351430:intron |
| AAGATGTGCTTGATCATGCT+GGG | 0.617257 | 3_1:+18171543 | None:intergenic |
| TATGAGGGATGATGATTCTG+AGG | 0.620873 | 3_1:-18170567 | Msa0351430:CDS |
| GTGTCGTTACCAGTAAGCGT+AGG | 0.621779 | 3_1:-18175524 | Msa0351430:CDS |
| TGTCGTTACCAGTAAGCGTA+GGG | 0.622629 | 3_1:-18175523 | Msa0351430:CDS |
| TTCGGATGAGGACGAAGATG+AGG | 0.623505 | 3_1:-18170492 | Msa0351430:intron |
| TGGAGAACAATATTGTACGT+TGG | 0.625363 | 3_1:-18172394 | Msa0351430:CDS |
| CAATTGTTGACTCAAGGCAA+AGG | 0.626176 | 3_1:-18171338 | Msa0351430:CDS |
| ACTCCAAGGGAACCCAGCTG+AGG | 0.633723 | 3_1:-18168887 | Msa0351430:three_prime_UTR |
| AGAGCTGGTGGTGGACGTAG+TGG | 0.639818 | 3_1:+18172932 | None:intergenic |
| AAATCCTCCCGGCACCAAGT+GGG | 0.639942 | 3_1:-18170665 | Msa0351430:CDS |
| GGCTGAAAGTCAGACTATCA+GGG | 0.640361 | 3_1:-18171168 | Msa0351430:CDS |
| GAATTCGACGACAAGGAAGA+GGG | 0.641254 | 3_1:+18171378 | None:intergenic |
| AGGAAAGTCACAAATCCTGA+TGG | 0.643610 | 3_1:-18172371 | Msa0351430:CDS |
| AAACTAAAGATAAGCCACTT+GGG | 0.644064 | 3_1:-18172976 | Msa0351430:CDS |
| CCGATGAGAATTCGACGACA+AGG | 0.652415 | 3_1:+18171371 | None:intergenic |
| GCATCAGTATGAATCAGAGG+AGG | 0.652612 | 3_1:-18173014 | Msa0351430:CDS |
| GGAATTTCTAACTCCAATGG+TGG | 0.657203 | 3_1:+18172953 | None:intergenic |
| AATATACTCCAACTGAGAGG+AGG | 0.657581 | 3_1:-18171103 | Msa0351430:CDS |
| TGAAAAGAGCTTGAGACCCG+AGG | 0.658806 | 3_1:-18173056 | Msa0351430:CDS |
| TTACAGACATTGATCCTGAG+AGG | 0.665584 | 3_1:-18171290 | Msa0351430:CDS |
| GGAGGAACGATGGCTTACGA+GGG | 0.667853 | 3_1:+18170696 | None:intergenic |
| AAATACATCACGAATTTCCG+GGG | 0.669442 | 3_1:+18173272 | None:intergenic |
| TACAGACATTGATCCTGAGA+GGG | 0.679758 | 3_1:-18171289 | Msa0351430:CDS |
| CTTACGGGTAAGAAGTACGT+TGG | 0.682141 | 3_1:+18171145 | None:intergenic |
| TCATCCCTCATACGAGAACG+AGG | 0.687760 | 3_1:+18170578 | None:intergenic |
| GTAACCCACTTGGTGCCGGG+AGG | 0.688990 | 3_1:+18170661 | None:intergenic |
| GGAAATATACTCCAACTGAG+AGG | 0.696141 | 3_1:-18171106 | Msa0351430:CDS |
| GTTGTAGAGATATACTGCGG+AGG | 0.702989 | 3_1:-18173092 | Msa0351430:intron |
| CCTGTTGTAGAGATATACTG+CGG | 0.709987 | 3_1:-18173095 | Msa0351430:intron |
| CAGCAGCTAGAAGAAGCCTG+AGG | 0.712548 | 3_1:-18175455 | Msa0351430:intron |
| CTTCGGAGATCAATCCGAGG+AGG | 0.714867 | 3_1:-18175963 | Msa0351430:CDS |
| ATATGAAACTGAAGACGACG+AGG | 0.714895 | 3_1:-18170612 | Msa0351430:CDS |
| TCTCTTCGGAGATCAATCCG+AGG | 0.735019 | 3_1:-18175966 | Msa0351430:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAATAATAATAATTAAA+AGG | + | chr3_1:18170647-18170666 | None:intergenic | 0.0% |
| !!! | TTTTTTTTGAAAAAAAATAG+TGG | - | chr3_1:18171645-18171664 | Msa0351430:intron | 10.0% |
| !!! | TTTTTTTGAAAAAAAATAGT+GGG | - | chr3_1:18171646-18171665 | Msa0351430:intron | 10.0% |
| !!! | ATTTTTTTTCTTATTTTAAG+AGG | - | chr3_1:18175049-18175068 | Msa0351430:intron | 10.0% |
| !! | ATGCAAAATAAATAAAAAAA+GGG | + | chr3_1:18175835-18175854 | None:intergenic | 10.0% |
| !! | AATGCAAAATAAATAAAAAA+AGG | + | chr3_1:18175836-18175855 | None:intergenic | 10.0% |
| !! | ATAATTGAGTAATCTTTATA+TGG | + | chr3_1:18170387-18170406 | None:intergenic | 15.0% |
| !! | AATCATATTAAAAACTTCAA+GGG | + | chr3_1:18171198-18171217 | None:intergenic | 15.0% |
| !! | AAATCATATTAAAAACTTCA+AGG | + | chr3_1:18171199-18171218 | None:intergenic | 15.0% |
| !! | AAAAAGTTATCTTAAATTAG+AGG | - | chr3_1:18171523-18171542 | Msa0351430:intron | 15.0% |
| !! | TATATGTTATTGTTAAAATG+AGG | - | chr3_1:18172113-18172132 | Msa0351430:intron | 15.0% |
| !!! | ATTTTTTGTTAGTTAAAAGT+TGG | - | chr3_1:18172181-18172200 | Msa0351430:intron | 15.0% |
| !!! | TAATTTTAGATCTTTGTTAA+TGG | - | chr3_1:18173085-18173104 | Msa0351430:CDS | 15.0% |
| !!! | CAATTTTATCTTTGTTTAAT+TGG | - | chr3_1:18174633-18174652 | Msa0351430:intron | 15.0% |
| !!! | AAATATTTTGTACAGATATT+AGG | - | chr3_1:18174768-18174787 | Msa0351430:intron | 15.0% |
| !! | ATAAATCATGTATTTATTCA+AGG | + | chr3_1:18175714-18175733 | None:intergenic | 15.0% |
| !! | TATGTTGTAAAATATTGTAA+GGG | + | chr3_1:18176137-18176156 | None:intergenic | 15.0% |
| !! | ATATGTTGTAAAATATTGTA+AGG | + | chr3_1:18176138-18176157 | None:intergenic | 15.0% |
| !!! | TACAATATTTTACAACATAT+AGG | - | chr3_1:18176138-18176157 | Msa0351430:five_prime_UTR | 15.0% |
| !!! | ACAATATTTTACAACATATA+GGG | - | chr3_1:18176139-18176158 | Msa0351430:five_prime_UTR | 15.0% |
| !! | ATCGTATTGAAAATTTGAAA+TGG | - | chr3_1:18169234-18169253 | Msa0351430:intron | 20.0% |
| !!! | AATTTGAAATGGTGAATTTT+TGG | - | chr3_1:18169245-18169264 | Msa0351430:intron | 20.0% |
| !!! | AAATTTTACAATGAAATTGC+TGG | - | chr3_1:18169645-18169664 | Msa0351430:intron | 20.0% |
| !! | ATAATTAAAAGGTCTAAGAA+AGG | + | chr3_1:18170636-18170655 | None:intergenic | 20.0% |
| !!! | CTGTTTTTTTATAATAAGAG+AGG | + | chr3_1:18170708-18170727 | None:intergenic | 20.0% |
| !! | TTCTCATGGAATAATAAAAT+CGG | + | chr3_1:18171014-18171033 | None:intergenic | 20.0% |
| !! | TTTATTATTCCATGAGAAAA+AGG | - | chr3_1:18171016-18171035 | Msa0351430:intron | 20.0% |
| !!! | TTTATCACTGTAATTGATTT+CGG | - | chr3_1:18171392-18171411 | Msa0351430:CDS | 20.0% |
| !! | AACAATAACATATAGAACAT+AGG | + | chr3_1:18172107-18172126 | None:intergenic | 20.0% |
| !!! | CTGAATTTTGAAATGTTTAA+AGG | - | chr3_1:18172223-18172242 | Msa0351430:intron | 20.0% |
| !! | TTGTAAAATTCTCATCATTT+AGG | + | chr3_1:18172315-18172334 | None:intergenic | 20.0% |
| !! | GAATGCATATCATATTATAA+AGG | + | chr3_1:18172421-18172440 | None:intergenic | 20.0% |
| !!! | TTTAAAGTTTCCAATATCAT+GGG | - | chr3_1:18172478-18172497 | Msa0351430:CDS | 20.0% |
| !!! | AAGAAAGATTTGGAATTAAA+TGG | + | chr3_1:18172867-18172886 | None:intergenic | 20.0% |
| !! | TAATTCCAAATCTTTCTTAA+TGG | - | chr3_1:18172869-18172888 | Msa0351430:intron | 20.0% |
| !!! | TTAAATGCCATTTCATAATT+AGG | + | chr3_1:18173133-18173152 | None:intergenic | 20.0% |
| !! | AATATGTATTACTGTTGATA+TGG | - | chr3_1:18173151-18173170 | Msa0351430:intron | 20.0% |
| !! | TTGTTTATTGTTGAATGTTA+AGG | - | chr3_1:18173264-18173283 | Msa0351430:CDS | 20.0% |
| !! | TGTTTATTGTTGAATGTTAA+GGG | - | chr3_1:18173265-18173284 | Msa0351430:CDS | 20.0% |
| !!! | CATTAATGAAGGTTATTTTA+TGG | - | chr3_1:18174237-18174256 | Msa0351430:intron | 20.0% |
| !!! | TGCTTTGGATTTAAAAAAAT+GGG | - | chr3_1:18174900-18174919 | Msa0351430:intron | 20.0% |
| !! | GTTATCAATTAACATTGTTA+TGG | - | chr3_1:18175483-18175502 | Msa0351430:CDS | 20.0% |
| !! | CAAAAGAGTAAGAATTTAAA+AGG | - | chr3_1:18175544-18175563 | Msa0351430:CDS | 20.0% |
| !! | CAAAATAAATAAAAAAAGGG+AGG | + | chr3_1:18175832-18175851 | None:intergenic | 20.0% |
| !!! | ATTTTCGTTATTAGTTTTCA+AGG | - | chr3_1:18175853-18175872 | Msa0351430:intron | 20.0% |
| !! | CTTTGATACTTTACAATATA+TGG | - | chr3_1:18176168-18176187 | Msa0351430:five_prime_UTR | 20.0% |
| !!! | TACAATATATGGATTAAAAG+AGG | - | chr3_1:18176179-18176198 | Msa0351430:five_prime_UTR | 20.0% |
| !!! | TTTTTTTTGTCTTTGAGAAG+AGG | - | chr3_1:18168859-18168878 | Msa0351430:three_prime_UTR | 25.0% |
| !! | TATTCCTTTGTTTATGCATT+TGG | - | chr3_1:18169208-18169227 | Msa0351430:intron | 25.0% |
| ! | AAAAGAAAAAAAACTACCTC+AGG | + | chr3_1:18169548-18169567 | None:intergenic | 25.0% |
| ! | TCATTAATTTACCACATTGT+TGG | - | chr3_1:18169587-18169606 | Msa0351430:intron | 25.0% |
| ! | CATTAATTTACCACATTGTT+GGG | - | chr3_1:18169588-18169607 | Msa0351430:intron | 25.0% |
| !!! | GCTGTTTTGATTAAGTTTTT+TGG | - | chr3_1:18169616-18169635 | Msa0351430:intron | 25.0% |
| !!! | TTTATTTCTAAGAAACCTAG+TGG | + | chr3_1:18169941-18169960 | None:intergenic | 25.0% |
| !! | TTCAACTCAATTCTTTTAGA+TGG | - | chr3_1:18170028-18170047 | Msa0351430:intron | 25.0% |
| !! | TCAACTCAATTCTTTTAGAT+GGG | - | chr3_1:18170029-18170048 | Msa0351430:intron | 25.0% |
| ! | TTCTTGAGGAATAATAGAAT+CGG | - | chr3_1:18170175-18170194 | Msa0351430:intron | 25.0% |
| ! | ATAAAAAAACAGCAGTGAAT+TGG | - | chr3_1:18170716-18170735 | Msa0351430:CDS | 25.0% |
| !! | GACATTTTCTATGTTCTATT+TGG | + | chr3_1:18171550-18171569 | None:intergenic | 25.0% |
| ! | TTGAGAAATTTCTGATGTTA+TGG | - | chr3_1:18172276-18172295 | Msa0351430:intron | 25.0% |
| !! | TGATGAGAATTTTACAAGTT+TGG | - | chr3_1:18172318-18172337 | Msa0351430:intron | 25.0% |
| !!! | GTTGAATAGATTTTGACATA+TGG | - | chr3_1:18172360-18172379 | Msa0351430:intron | 25.0% |
| !! | GTTTAAAGTTTCCAATATCA+TGG | - | chr3_1:18172477-18172496 | Msa0351430:CDS | 25.0% |
| ! | AAATGGTTTAAATGTAGACA+TGG | + | chr3_1:18172850-18172869 | None:intergenic | 25.0% |
| ! | CTTTAAATATGATTCATGAG+AGG | + | chr3_1:18173055-18173074 | None:intergenic | 25.0% |
| ! | GAAATAGCCTAATTATGAAA+TGG | - | chr3_1:18173123-18173142 | Msa0351430:intron | 25.0% |
| ! | AAAAAATCTTGTTCATGATC+AGG | - | chr3_1:18173328-18173347 | Msa0351430:intron | 25.0% |
| ! | TTTGGATGAGGTATAAATTT+AGG | - | chr3_1:18173936-18173955 | Msa0351430:intron | 25.0% |
| ! | TTGGATGAGGTATAAATTTA+GGG | - | chr3_1:18173937-18173956 | Msa0351430:intron | 25.0% |
| !!! | AAGGGAGCATTAATAAATAA+TGG | + | chr3_1:18174054-18174073 | None:intergenic | 25.0% |
| !!! | GGTATTATTATTTTGTCTCT+AGG | - | chr3_1:18174185-18174204 | Msa0351430:intron | 25.0% |
| !! | TTTTGCGTTAACATTAATGA+AGG | - | chr3_1:18174226-18174245 | Msa0351430:intron | 25.0% |
| !!! | ATTGGTTTTCTTTTAATCTC+TGG | - | chr3_1:18174651-18174670 | Msa0351430:intron | 25.0% |
| !! | CTGCTTTGGATTTAAAAAAA+TGG | - | chr3_1:18174899-18174918 | Msa0351430:intron | 25.0% |
| ! | AACAGTCAATAATAGGTATT+GGG | + | chr3_1:18175149-18175168 | None:intergenic | 25.0% |
| ! | AAATGTTAAGAGCAATATTC+AGG | + | chr3_1:18175290-18175309 | None:intergenic | 25.0% |
| !! | ACATTTCCATTTTGTTCATT+TGG | - | chr3_1:18175304-18175323 | Msa0351430:intron | 25.0% |
| !! | CATTTCCATTTTGTTCATTT+GGG | - | chr3_1:18175305-18175324 | Msa0351430:intron | 25.0% |
| ! | AAAAAAACAAGGATAGTGTT+AGG | + | chr3_1:18175387-18175406 | None:intergenic | 25.0% |
| ! | AATACCAGAACAAAAAAACA+AGG | + | chr3_1:18175398-18175417 | None:intergenic | 25.0% |
| ! | TTCTTCTTTACATATCTGTT+AGG | - | chr3_1:18175425-18175444 | Msa0351430:intron | 25.0% |
| ! | CATAATGAAAATCTGACTTA+CGG | + | chr3_1:18175680-18175699 | None:intergenic | 25.0% |
| ! | CATGTATTTATTCAAGGTTA+AGG | + | chr3_1:18175708-18175727 | None:intergenic | 25.0% |
| !!! | TGTTTTTGCTATCAAAAGAA+GGG | - | chr3_1:18175769-18175788 | Msa0351430:intron | 25.0% |
| ! | ATAAATAAAAAAAGGGAGGA+AGG | + | chr3_1:18175828-18175847 | None:intergenic | 25.0% |
| ! | ATTGAAAATCCTACATATGA+TGG | + | chr3_1:18175896-18175915 | None:intergenic | 25.0% |
| !! | AAATTTACTGAGCTTTTCTA+GGG | - | chr3_1:18175920-18175939 | Msa0351430:CDS | 25.0% |
| ! | AATCTTACAGAATTGAGTTG+AGG | + | chr3_1:18169082-18169101 | None:intergenic | 30.0% |
| TCTTCCAAATGCATAAACAA+AGG | + | chr3_1:18169215-18169234 | None:intergenic | 30.0% | |
| !!! | TTTGATTAAGTTTTTTGGCG+CGG | - | chr3_1:18169621-18169640 | Msa0351430:intron | 30.0% |
| TCTACACAACTAATAAAACC+CGG | + | chr3_1:18169703-18169722 | None:intergenic | 30.0% | |
| TCATGTAAGTACAACTTAGT+TGG | - | chr3_1:18169831-18169850 | Msa0351430:intron | 30.0% | |
| ATCTTAAGCTTGGAGAAATA+AGG | + | chr3_1:18169906-18169925 | None:intergenic | 30.0% | |
| ! | AAATTTGCACGTTTTTCTTG+AGG | - | chr3_1:18170161-18170180 | Msa0351430:intron | 30.0% |
| !! | ATAATAGAATCGGCTACTTT+TGG | - | chr3_1:18170185-18170204 | Msa0351430:intron | 30.0% |
| AAAGGTCTAAGAAAGGAATT+GGG | + | chr3_1:18170629-18170648 | None:intergenic | 30.0% | |
| AAAAGGTCTAAGAAAGGAAT+TGG | + | chr3_1:18170630-18170649 | None:intergenic | 30.0% | |
| ! | TGCAAGTTAATTTTTCCTGA+TGG | + | chr3_1:18170827-18170846 | None:intergenic | 30.0% |
| ATAATAAAATCGGCTACTTC+TGG | + | chr3_1:18171004-18171023 | None:intergenic | 30.0% | |
| ! | AAATTTGCACCTTTTTCTCA+TGG | + | chr3_1:18171028-18171047 | None:intergenic | 30.0% |
| CACATCCTATAAATCATGAT+CGG | + | chr3_1:18171450-18171469 | None:intergenic | 30.0% | |
| AGTTTCTGATTCTCAATGTT+GGG | + | chr3_1:18171614-18171633 | None:intergenic | 30.0% | |
| CAAAGATCAGAATCATGATT+TGG | - | chr3_1:18171683-18171702 | Msa0351430:intron | 30.0% | |
| AAAACTAAAGATAAGCCACT+TGG | - | chr3_1:18172007-18172026 | Msa0351430:intron | 30.0% | |
| AAACTAAAGATAAGCCACTT+GGG | - | chr3_1:18172008-18172027 | Msa0351430:intron | 30.0% | |
| GAACACCAACATATCTTTAA+GGG | - | chr3_1:18172245-18172264 | Msa0351430:intron | 30.0% | |
| AACTTCCCTTAAAGATATGT+TGG | + | chr3_1:18172253-18172272 | None:intergenic | 30.0% | |
| GAAATTTCTGATGTTATGGT+TGG | - | chr3_1:18172280-18172299 | Msa0351430:intron | 30.0% | |
| !! | TCATATGTTCTAGGATCAAA+TGG | + | chr3_1:18172517-18172536 | None:intergenic | 30.0% |
| TCTTCTTCTTCATATGTTCT+AGG | + | chr3_1:18172526-18172545 | None:intergenic | 30.0% | |
| ACCTTTGTAACTGATGAATT+TGG | - | chr3_1:18172547-18172566 | Msa0351430:intron | 30.0% | |
| TCCAAATTCATCAGTTACAA+AGG | + | chr3_1:18172551-18172570 | None:intergenic | 30.0% | |
| ! | TGTTACAACTAAGAGTGTAA+TGG | + | chr3_1:18172741-18172760 | None:intergenic | 30.0% |
| ! | ATTCTTCTCCCTTTTACTAA+TGG | - | chr3_1:18172914-18172933 | Msa0351430:intron | 30.0% |
| AGACCAAACCATTAGTAAAA+GGG | + | chr3_1:18172925-18172944 | None:intergenic | 30.0% | |
| TAGACCAAACCATTAGTAAA+AGG | + | chr3_1:18172926-18172945 | None:intergenic | 30.0% | |
| ! | ACTTAAACCTTTTTCCTGTT+AGG | - | chr3_1:18172993-18173012 | Msa0351430:CDS | 30.0% |
| !!! | CTGTTTTTGAGTAAGAGTAT+TGG | - | chr3_1:18173222-18173241 | Msa0351430:CDS | 30.0% |
| GGTGAATTTCATTATTCTCA+TGG | - | chr3_1:18173481-18173500 | Msa0351430:intron | 30.0% | |
| CCTGAAAATGATAGAGAAAT+TGG | + | chr3_1:18173798-18173817 | None:intergenic | 30.0% | |
| ! | CCAATTTCTCTATCATTTTC+AGG | - | chr3_1:18173795-18173814 | Msa0351430:intron | 30.0% |
| TAAAAGACAATAGTGTCTCT+AGG | + | chr3_1:18173970-18173989 | None:intergenic | 30.0% | |
| !! | CATTTGCTGCAATATTTTCT+AGG | - | chr3_1:18173999-18174018 | Msa0351430:intron | 30.0% |
| ! | TTTTATGGAATTCTAGTCAC+AGG | - | chr3_1:18174252-18174271 | Msa0351430:intron | 30.0% |
| TTTATGGAATTCTAGTCACA+GGG | - | chr3_1:18174253-18174272 | Msa0351430:intron | 30.0% | |
| AGAACAAGAAAATGATGCTT+CGG | - | chr3_1:18174474-18174493 | Msa0351430:intron | 30.0% | |
| TGTGAACCAATAAATGGTAA+AGG | + | chr3_1:18174608-18174627 | None:intergenic | 30.0% | |
| GATTGTTGTGAACCAATAAA+TGG | + | chr3_1:18174614-18174633 | None:intergenic | 30.0% | |
| ! | ATGCTTGCAATATTTTGCAT+AGG | - | chr3_1:18174708-18174727 | Msa0351430:intron | 30.0% |
| GCAATCAAATGTTAATGGTT+TGG | + | chr3_1:18174880-18174899 | None:intergenic | 30.0% | |
| AAGCAGCAATCAAATGTTAA+TGG | + | chr3_1:18174885-18174904 | None:intergenic | 30.0% | |
| ! | TTAACATTTGATTGCTGCTT+TGG | - | chr3_1:18174885-18174904 | Msa0351430:intron | 30.0% |
| AAAAAAATGGGCAATTAACC+AGG | - | chr3_1:18174912-18174931 | Msa0351430:intron | 30.0% | |
| AAACCAACCCAATAATGATT+AGG | + | chr3_1:18174943-18174962 | None:intergenic | 30.0% | |
| CAACAGTCAATAATAGGTAT+TGG | + | chr3_1:18175150-18175169 | None:intergenic | 30.0% | |
| TCAACACAACAGTCAATAAT+AGG | + | chr3_1:18175156-18175175 | None:intergenic | 30.0% | |
| !! | CTTTGTCCTTTAAAGTGAAT+TGG | - | chr3_1:18175199-18175218 | Msa0351430:intron | 30.0% |
| AGTCTACCAATTCACTTTAA+AGG | + | chr3_1:18175208-18175227 | None:intergenic | 30.0% | |
| CAAAACCCAAATGAACAAAA+TGG | + | chr3_1:18175313-18175332 | None:intergenic | 30.0% | |
| ACAAAGCTTAATAAGGAACT+CGG | + | chr3_1:18175339-18175358 | None:intergenic | 30.0% | |
| CACTGAAACAAAGCTTAATA+AGG | + | chr3_1:18175346-18175365 | None:intergenic | 30.0% | |
| TTTCAGTGATACTTGTCTAT+TGG | - | chr3_1:18175358-18175377 | Msa0351430:intron | 30.0% | |
| !!! | CTATCCTTGTTTTTTTGTTC+TGG | - | chr3_1:18175391-18175410 | Msa0351430:intron | 30.0% |
| ACTATTTCATGTTTACTTGC+AGG | - | chr3_1:18175513-18175532 | Msa0351430:CDS | 30.0% | |
| CTATTTCATGTTTACTTGCA+GGG | - | chr3_1:18175514-18175533 | Msa0351430:CDS | 30.0% | |
| GAGTAAGAATTTAAAAGGCA+AGG | - | chr3_1:18175549-18175568 | Msa0351430:CDS | 30.0% | |
| !! | CTTTTGATAGCAAAAACACA+TGG | + | chr3_1:18175767-18175786 | None:intergenic | 30.0% |
| !! | GTGTTTTTGCTATCAAAAGA+AGG | - | chr3_1:18175768-18175787 | Msa0351430:intron | 30.0% |
| !! | GTTATTTTGCCATCATATGT+AGG | - | chr3_1:18175884-18175903 | Msa0351430:intron | 30.0% |
| ! | GAAATTTACTGAGCTTTTCT+AGG | - | chr3_1:18175919-18175938 | Msa0351430:CDS | 30.0% |
| TGCTTCTTCTTCTATAATTC+AGG | - | chr3_1:18175969-18175988 | Msa0351430:CDS | 30.0% | |
| ATAATTCAGGATCTTGCAAT+TGG | - | chr3_1:18175982-18176001 | Msa0351430:CDS | 30.0% | |
| ! | TGCTCTTGTATTTCTAATGA+CGG | - | chr3_1:18176021-18176040 | Msa0351430:exon | 30.0% |
| !!! | TGTTCTAAAGTTTTACTCCA+AGG | - | chr3_1:18176083-18176102 | Msa0351430:five_prime_UTR | 30.0% |
| !!! | GTTCTAAAGTTTTACTCCAA+GGG | - | chr3_1:18176084-18176103 | Msa0351430:five_prime_UTR | 30.0% |
| !! | CACAAGTTCTAAGCTCAAAA+CGG | - | chr3_1:18168900-18168919 | Msa0351430:three_prime_UTR | 35.0% |
| TTGAGGATTGGATTCATGTT+CGG | + | chr3_1:18169065-18169084 | None:intergenic | 35.0% | |
| !! | TACAGAATTGAGTTGAGGAT+TGG | + | chr3_1:18169077-18169096 | None:intergenic | 35.0% |
| !!! | TGGTGAATTTTTGGTATTGC+AGG | - | chr3_1:18169254-18169273 | Msa0351430:intron | 35.0% |
| !! | TTTTTGGTATTGCAGGATGA+AGG | - | chr3_1:18169261-18169280 | Msa0351430:intron | 35.0% |
| ! | ACGCTGATTGTAATCATCTT+TGG | + | chr3_1:18169442-18169461 | None:intergenic | 35.0% |
| AATTTACCACATTGTTGGGT+TGG | - | chr3_1:18169592-18169611 | Msa0351430:intron | 35.0% | |
| TATGTGGTTGCTAATTGAAC+CGG | - | chr3_1:18169681-18169700 | Msa0351430:intron | 35.0% | |
| TTGGAGAAATAAGGAATCCT+AGG | + | chr3_1:18169897-18169916 | None:intergenic | 35.0% | |
| CTTAGAAATAAAGAGTCCTC+TGG | - | chr3_1:18169949-18169968 | Msa0351430:intron | 35.0% | |
| ! | CAAGAGCATAAGAATCAAGA+AGG | + | chr3_1:18169981-18170000 | None:intergenic | 35.0% |
| ! | ACTCAATTCTTTTAGATGGG+TGG | - | chr3_1:18170032-18170051 | Msa0351430:intron | 35.0% |
| ! | ATTCTTTTAGATGGGTGGAT+TGG | - | chr3_1:18170037-18170056 | Msa0351430:intron | 35.0% |
| AATCTCCTATCTGCTATCTT+GGG | - | chr3_1:18170277-18170296 | Msa0351430:intron | 35.0% | |
| ! | GTTGGAAATGAAACTGGTTT+GGG | + | chr3_1:18170303-18170322 | None:intergenic | 35.0% |
| ATACACAAGATTGACGACAA+AGG | + | chr3_1:18170519-18170538 | None:intergenic | 35.0% | |
| TTGTCGTCAATCTTGTGTAT+CGG | - | chr3_1:18170519-18170538 | Msa0351430:CDS | 35.0% | |
| AAAACAGCAGTGAATTGGTT+TGG | - | chr3_1:18170721-18170740 | Msa0351430:intron | 35.0% | |
| ! | AAACAGCAGTGAATTGGTTT+GGG | - | chr3_1:18170722-18170741 | Msa0351430:intron | 35.0% |
| ! | CCTCTTTTTCTCATTCTCTT+GGG | + | chr3_1:18170874-18170893 | None:intergenic | 35.0% |
| ! | TCCTCTTTTTCTCATTCTCT+TGG | + | chr3_1:18170875-18170894 | None:intergenic | 35.0% |
| !!! | TCCTCATTTTTTTTCCCTCT+TGG | - | chr3_1:18171306-18171325 | Msa0351430:CDS | 35.0% |
| !!! | CCTCATTTTTTTTCCCTCTT+GGG | - | chr3_1:18171307-18171326 | Msa0351430:CDS | 35.0% |
| !!! | CTCATTTTTTTTCCCTCTTG+GGG | - | chr3_1:18171308-18171327 | Msa0351430:CDS | 35.0% |
| GATAATATGAATCCCCAAGA+GGG | + | chr3_1:18171323-18171342 | None:intergenic | 35.0% | |
| AACTTAGCTCAGCAGAAAAT+AGG | + | chr3_1:18171348-18171367 | None:intergenic | 35.0% | |
| TACGTCCGATCATGATTTAT+AGG | - | chr3_1:18171442-18171461 | Msa0351430:intron | 35.0% | |
| AGTATAGAACAGAATAGCAC+AGG | + | chr3_1:18171476-18171495 | None:intergenic | 35.0% | |
| AATTGTGCAAGCTGAATCTT+GGG | + | chr3_1:18171579-18171598 | None:intergenic | 35.0% | |
| AAATTGTGCAAGCTGAATCT+TGG | + | chr3_1:18171580-18171599 | None:intergenic | 35.0% | |
| CAGTTTCTGATTCTCAATGT+TGG | + | chr3_1:18171615-18171634 | None:intergenic | 35.0% | |
| TTCTGATCTTTGTCATCTCT+GGG | + | chr3_1:18171675-18171694 | None:intergenic | 35.0% | |
| ATTCTGATCTTTGTCATCTC+TGG | + | chr3_1:18171676-18171695 | None:intergenic | 35.0% | |
| AAATACATCACGAATTTCCG+GGG | + | chr3_1:18171715-18171734 | None:intergenic | 35.0% | |
| CAAATACATCACGAATTTCC+GGG | + | chr3_1:18171716-18171735 | None:intergenic | 35.0% | |
| CCAAATACATCACGAATTTC+CGG | + | chr3_1:18171717-18171736 | None:intergenic | 35.0% | |
| !!! | TGGTGATTTTGATGATGAAG+AGG | - | chr3_1:18171734-18171753 | Msa0351430:intron | 35.0% |
| !!! | TGATTTTGATGATGAAGAGG+AGG | - | chr3_1:18171737-18171756 | Msa0351430:intron | 35.0% |
| TTCATCAGCAAGTATATCCT+CGG | + | chr3_1:18171948-18171967 | None:intergenic | 35.0% | |
| AGTGGAATTTCTAACTCCAA+TGG | + | chr3_1:18172037-18172056 | None:intergenic | 35.0% | |
| GGAACACCAACATATCTTTA+AGG | - | chr3_1:18172244-18172263 | Msa0351430:intron | 35.0% | |
| GACATATGGTATCACTCTAT+TGG | - | chr3_1:18172374-18172393 | Msa0351430:CDS | 35.0% | |
| ! | AAGGTGTTCTATGTGTAGTT+AGG | + | chr3_1:18172402-18172421 | None:intergenic | 35.0% |
| !!! | GTTCTAGGATCAAATGGTTT+TGG | + | chr3_1:18172511-18172530 | None:intergenic | 35.0% |
| TGGAGAACAATATTGTACGT+TGG | - | chr3_1:18172590-18172609 | Msa0351430:intron | 35.0% | |
| AGAACAATATTGTACGTTGG+AGG | - | chr3_1:18172593-18172612 | Msa0351430:intron | 35.0% | |
| ! | CTTTCCTTCTTTTACATCCA+TGG | - | chr3_1:18172705-18172724 | Msa0351430:intron | 35.0% |
| CTTACCATGGATGTAAAAGA+AGG | + | chr3_1:18172712-18172731 | None:intergenic | 35.0% | |
| ! | TCTTTTACATCCATGGTAAG+TGG | - | chr3_1:18172712-18172731 | Msa0351430:intron | 35.0% |
| !! | AAAGGCTTTATGGGATTTTG+TGG | + | chr3_1:18172769-18172788 | None:intergenic | 35.0% |
| CCAGACCATTAAGAAAGATT+TGG | + | chr3_1:18172877-18172896 | None:intergenic | 35.0% | |
| CCAAATCTTTCTTAATGGTC+TGG | - | chr3_1:18172874-18172893 | Msa0351430:intron | 35.0% | |
| ! | TCTCCCTTTTACTAATGGTT+TGG | - | chr3_1:18172919-18172938 | Msa0351430:intron | 35.0% |
| ATTTATTGACCAAGCCTAAC+AGG | + | chr3_1:18173010-18173029 | None:intergenic | 35.0% | |
| GCTTGGTCAATAAATGAATC+AGG | - | chr3_1:18173015-18173034 | Msa0351430:CDS | 35.0% | |
| ! | GTATTGGCAAACTGAGTTAT+TGG | - | chr3_1:18173238-18173257 | Msa0351430:CDS | 35.0% |
| ! | GAAGCCTTCAGTTATTGATT+GGG | - | chr3_1:18173387-18173406 | Msa0351430:intron | 35.0% |
| ! | TCTTTTCCTTAGACATGGAA+AGG | - | chr3_1:18173460-18173479 | Msa0351430:intron | 35.0% |
| AATTCACCTTTCCATGTCTA+AGG | + | chr3_1:18173469-18173488 | None:intergenic | 35.0% | |
| ! | GATTTACTGTTTCTCCTCAA+TGG | - | chr3_1:18173514-18173533 | Msa0351430:intron | 35.0% |
| ACTATGTGCACTTGTTTACA+GGG | - | chr3_1:18173537-18173556 | Msa0351430:intron | 35.0% | |
| AATCACAAGGACAACTATCA+AGG | - | chr3_1:18173568-18173587 | Msa0351430:intron | 35.0% | |
| !! | TAACTGCAATTGTTGACTCA+AGG | - | chr3_1:18173640-18173659 | Msa0351430:intron | 35.0% |
| GGAGAAAGAAGAAAAGGAAA+AGG | - | chr3_1:18173716-18173735 | Msa0351430:intron | 35.0% | |
| TATTAATGCTCCCTTTCTTC+AGG | - | chr3_1:18174059-18174078 | Msa0351430:intron | 35.0% | |
| ! | ACGGATTATGAATGCTAAGA+AGG | - | chr3_1:18174164-18174183 | Msa0351430:intron | 35.0% |
| TGCACTAACAGAAAGTAAAC+TGG | + | chr3_1:18174585-18174604 | None:intergenic | 35.0% | |
| AGTGCACCTTTACCATTTAT+TGG | - | chr3_1:18174599-18174618 | Msa0351430:intron | 35.0% | |
| CTTCTTGTCAGTTGTTAAAG+TGG | - | chr3_1:18174740-18174759 | Msa0351430:intron | 35.0% | |
| TTATGTGCCTTGATTCATGT+TGG | - | chr3_1:18174795-18174814 | Msa0351430:intron | 35.0% | |
| TATGTGCCTTGATTCATGTT+GGG | - | chr3_1:18174796-18174815 | Msa0351430:intron | 35.0% | |
| AAAGTTCCCAACATGAATCA+AGG | + | chr3_1:18174805-18174824 | None:intergenic | 35.0% | |
| TTGATTCATGTTGGGAACTT+TGG | - | chr3_1:18174804-18174823 | Msa0351430:intron | 35.0% | |
| !! | AATAATGATTAGGTTGGTCC+TGG | + | chr3_1:18174933-18174952 | None:intergenic | 35.0% |
| AGGACCAACCTAATCATTAT+TGG | - | chr3_1:18174932-18174951 | Msa0351430:intron | 35.0% | |
| GGACCAACCTAATCATTATT+GGG | - | chr3_1:18174933-18174952 | Msa0351430:intron | 35.0% | |
| CAACCCAATAATGATTAGGT+TGG | + | chr3_1:18174939-18174958 | None:intergenic | 35.0% | |
| CAACCTAATCATTATTGGGT+TGG | - | chr3_1:18174937-18174956 | Msa0351430:intron | 35.0% | |
| !! | ATTATTGGGTTGGTTTGAGT+TGG | - | chr3_1:18174947-18174966 | Msa0351430:intron | 35.0% |
| !! | TTATTGGGTTGGTTTGAGTT+GGG | - | chr3_1:18174948-18174967 | Msa0351430:intron | 35.0% |
| GTAGCTATATCTCATAGGAT+CGG | + | chr3_1:18175014-18175033 | None:intergenic | 35.0% | |
| CATCAGTAGCTATATCTCAT+AGG | + | chr3_1:18175019-18175038 | None:intergenic | 35.0% | |
| CTATGAGATATAGCTACTGA+TGG | - | chr3_1:18175017-18175036 | Msa0351430:intron | 35.0% | |
| TGGGTAATGCTAACAAATCA+TGG | + | chr3_1:18175130-18175149 | None:intergenic | 35.0% | |
| ! | AGAATCAAACCCCTTCTTTT+TGG | + | chr3_1:18175575-18175594 | None:intergenic | 35.0% |
| TGTCAGACATAATTGTCATC+CGG | + | chr3_1:18175639-18175658 | None:intergenic | 35.0% | |
| ACACATGGTTTATCATCTCA+TGG | + | chr3_1:18175752-18175771 | None:intergenic | 35.0% | |
| TAAAAAAAGGGAGGAAGGAA+GGG | + | chr3_1:18175823-18175842 | None:intergenic | 35.0% | |
| ATAAAAAAAGGGAGGAAGGA+AGG | + | chr3_1:18175824-18175843 | None:intergenic | 35.0% | |
| AGGATCTTGCAATTGGAATT+TGG | - | chr3_1:18175989-18176008 | Msa0351430:CDS | 35.0% | |
| TTTCTACGCTCTCTCTGTTT+GGG | + | chr3_1:18168959-18168978 | None:intergenic | 40.0% | |
| ! | TTTTCTACGCTCTCTCTGTT+TGG | + | chr3_1:18168960-18168979 | None:intergenic | 40.0% |
| ! | ACAGAGAGAGCGTAGAAAAA+TGG | - | chr3_1:18168961-18168980 | Msa0351430:three_prime_UTR | 40.0% |
| ! | CAGAGAGAGCGTAGAAAAAT+GGG | - | chr3_1:18168962-18168981 | Msa0351430:three_prime_UTR | 40.0% |
| ! | AGAGAGAGCGTAGAAAAATG+GGG | - | chr3_1:18168963-18168982 | Msa0351430:three_prime_UTR | 40.0% |
| CAGATGATGCAGAATCTCTT+CGG | - | chr3_1:18169004-18169023 | Msa0351430:three_prime_UTR | 40.0% | |
| AAGTTCATCTTCTTCCTCCT+CGG | + | chr3_1:18169038-18169057 | None:intergenic | 40.0% | |
| ! | TGGATCTGATGATGATGAAC+AGG | - | chr3_1:18169497-18169516 | Msa0351430:intron | 40.0% |
| CAATGAAATTGCTGGAGAAG+CGG | - | chr3_1:18169653-18169672 | Msa0351430:intron | 40.0% | |
| ATGTGGTTGCTAATTGAACC+GGG | - | chr3_1:18169682-18169701 | Msa0351430:intron | 40.0% | |
| TGCAAAGACGATGATATGCA+TGG | - | chr3_1:18169858-18169877 | Msa0351430:intron | 40.0% | |
| GCAAAGACGATGATATGCAT+GGG | - | chr3_1:18169859-18169878 | Msa0351430:intron | 40.0% | |
| AGACTCACACATCTTAAGCT+TGG | + | chr3_1:18169916-18169935 | None:intergenic | 40.0% | |
| ! | ATAAAGCCAGTCCTTGTTGT+GGG | - | chr3_1:18170069-18170088 | Msa0351430:intron | 40.0% |
| AAAACGTGCAAATTTCACCC+TGG | + | chr3_1:18170156-18170175 | None:intergenic | 40.0% | |
| ATAGGAGATTCTAGGTTGCA+AGG | + | chr3_1:18170267-18170286 | None:intergenic | 40.0% | |
| GATAGCAGATAGGAGATTCT+AGG | + | chr3_1:18170275-18170294 | None:intergenic | 40.0% | |
| GAATCTCCTATCTGCTATCT+TGG | - | chr3_1:18170276-18170295 | Msa0351430:intron | 40.0% | |
| GGTTGGAAATGAAACTGGTT+TGG | + | chr3_1:18170304-18170323 | None:intergenic | 40.0% | |
| GATGTGGTTGGAAATGAAAC+TGG | + | chr3_1:18170309-18170328 | None:intergenic | 40.0% | |
| ATACACGAGATTGACGACAA+AGG | - | chr3_1:18170330-18170349 | Msa0351430:intron | 40.0% | |
| TTTCAAATCCGACAAGCTTC+AGG | - | chr3_1:18170433-18170452 | Msa0351430:intron | 40.0% | |
| TCTCTTAACCTGAAGCTTGT+CGG | + | chr3_1:18170444-18170463 | None:intergenic | 40.0% | |
| GTGTAGCTGGAAATGAAACT+GGG | - | chr3_1:18170541-18170560 | Msa0351430:CDS | 40.0% | |
| ATTTCTTGATCTGAACACGC+TGG | + | chr3_1:18170567-18170586 | None:intergenic | 40.0% | |
| AAGAGGAATATTGGGCACTT+GGG | + | chr3_1:18170748-18170767 | None:intergenic | 40.0% | |
| GTTCGCTGAAGAGGAATATT+GGG | + | chr3_1:18170756-18170775 | None:intergenic | 40.0% | |
| AGTTCGCTGAAGAGGAATAT+TGG | + | chr3_1:18170757-18170776 | None:intergenic | 40.0% | |
| GATTAAAGAGTTCGCTGAAG+AGG | + | chr3_1:18170765-18170784 | None:intergenic | 40.0% | |
| AGCATAGGGAATTGTAAACG+GGG | + | chr3_1:18170793-18170812 | None:intergenic | 40.0% | |
| GAGCATAGGGAATTGTAAAC+GGG | + | chr3_1:18170794-18170813 | None:intergenic | 40.0% | |
| GGAGCATAGGGAATTGTAAA+CGG | + | chr3_1:18170795-18170814 | None:intergenic | 40.0% | |
| !! | TTTTCCTGATGGTGAGAAGA+TGG | + | chr3_1:18170816-18170835 | None:intergenic | 40.0% |
| CCCAAGAGAATGAGAAAAAG+AGG | - | chr3_1:18170871-18170890 | Msa0351430:CDS | 40.0% | |
| ! | AAAAGGTGCAAATTTCACCC+TGG | - | chr3_1:18171033-18171052 | Msa0351430:intron | 40.0% |
| ATAAAGTGAGTCCTTGTTGC+GGG | + | chr3_1:18171120-18171139 | None:intergenic | 40.0% | |
| CATAAAGTGAGTCCTTGTTG+CGG | + | chr3_1:18171121-18171140 | None:intergenic | 40.0% | |
| CCCAAGAGGGAAAAAAAATG+AGG | + | chr3_1:18171310-18171329 | None:intergenic | 40.0% | |
| GGATAATATGAATCCCCAAG+AGG | + | chr3_1:18171324-18171343 | None:intergenic | 40.0% | |
| TTAGCTCAGCAGAAAATAGG+TGG | + | chr3_1:18171345-18171364 | None:intergenic | 40.0% | |
| CCGGAAATTCGTGATGTATT+TGG | - | chr3_1:18171714-18171733 | Msa0351430:intron | 40.0% | |
| ! | TGATGATGAAGAGGAGGATA+TGG | - | chr3_1:18171743-18171762 | Msa0351430:intron | 40.0% |
| GATGATGAAGAGGAGGATAT+GGG | - | chr3_1:18171744-18171763 | Msa0351430:intron | 40.0% | |
| ATGATGAAGAGGAGGATATG+GGG | - | chr3_1:18171745-18171764 | Msa0351430:intron | 40.0% | |
| CCTGTTGTAGAGATATACTG+CGG | - | chr3_1:18171889-18171908 | Msa0351430:intron | 40.0% | |
| TCATCAGCAAGTATATCCTC+GGG | + | chr3_1:18171947-18171966 | None:intergenic | 40.0% | |
| ! | AGAGCATCAGTATGAATCAG+AGG | - | chr3_1:18171967-18171986 | Msa0351430:intron | 40.0% |
| GGAATTTCTAACTCCAATGG+TGG | + | chr3_1:18172034-18172053 | None:intergenic | 40.0% | |
| CACAAATGAGAGGCTGTTAT+AGG | + | chr3_1:18172443-18172462 | None:intergenic | 40.0% | |
| ATAACAGCCTCTCATTTGTG+TGG | - | chr3_1:18172443-18172462 | Msa0351430:CDS | 40.0% | |
| TGGATCAACTCCCATGATAT+TGG | + | chr3_1:18172491-18172510 | None:intergenic | 40.0% | |
| AGGAAAGTCACAAATCCTGA+TGG | - | chr3_1:18172613-18172632 | Msa0351430:intron | 40.0% | |
| ! | CTAGTGGTCAAAGGCTTTAT+GGG | + | chr3_1:18172778-18172797 | None:intergenic | 40.0% |
| ! | AACCTTTTTCCTGTTAGGCT+TGG | - | chr3_1:18172998-18173017 | Msa0351430:CDS | 40.0% |
| AAAGCAATGCTCGCTTTGTA+AGG | - | chr3_1:18173354-18173373 | Msa0351430:intron | 40.0% | |
| GGAAGCCTTCAGTTATTGAT+TGG | - | chr3_1:18173386-18173405 | Msa0351430:intron | 40.0% | |
| CGTTCCCAATCAATAACTGA+AGG | + | chr3_1:18173394-18173413 | None:intergenic | 40.0% | |
| AGTTCTTGACATATCTGAGC+AGG | - | chr3_1:18173415-18173434 | Msa0351430:intron | 40.0% | |
| AAGATGTGCTTGATCATGCT+GGG | + | chr3_1:18173444-18173463 | None:intergenic | 40.0% | |
| AAAGATGTGCTTGATCATGC+TGG | + | chr3_1:18173445-18173464 | None:intergenic | 40.0% | |
| ! | GCACATCTTTTCCTTAGACA+TGG | - | chr3_1:18173455-18173474 | Msa0351430:intron | 40.0% |
| GACTATGTGCACTTGTTTAC+AGG | - | chr3_1:18173536-18173555 | Msa0351430:intron | 40.0% | |
| !! | CAATTGTTGACTCAAGGCAA+AGG | - | chr3_1:18173646-18173665 | Msa0351430:intron | 40.0% |
| TTACAGACATTGATCCTGAG+AGG | - | chr3_1:18173694-18173713 | Msa0351430:intron | 40.0% | |
| TACAGACATTGATCCTGAGA+GGG | - | chr3_1:18173695-18173714 | Msa0351430:intron | 40.0% | |
| ! | TTTTCTTCTTTCTCCCTCTC+AGG | + | chr3_1:18173711-18173730 | None:intergenic | 40.0% |
| TGAGAGGGAGAAAGAAGAAA+AGG | - | chr3_1:18173710-18173729 | Msa0351430:intron | 40.0% | |
| GGAAATATACTCCAACTGAG+AGG | - | chr3_1:18173878-18173897 | Msa0351430:intron | 40.0% | |
| AATATACTCCAACTGAGAGG+AGG | - | chr3_1:18173881-18173900 | Msa0351430:intron | 40.0% | |
| !! | ACTTTCTCCTGGGTTTTTAG+AGG | - | chr3_1:18173909-18173928 | Msa0351430:intron | 40.0% |
| ! | AAAGCATCCTCTAAAAACCC+AGG | + | chr3_1:18173919-18173938 | None:intergenic | 40.0% |
| !! | TGGGTTTTTAGAGGATGCTT+TGG | - | chr3_1:18173918-18173937 | Msa0351430:intron | 40.0% |
| ! | TTTAGAGGATGCTTTGGATG+AGG | - | chr3_1:18173924-18173943 | Msa0351430:intron | 40.0% |
| GGAACTGACACAGTTTAAGT+AGG | + | chr3_1:18174033-18174052 | None:intergenic | 40.0% | |
| TCATAATCCGTTTCTCTGCT+CGG | + | chr3_1:18174155-18174174 | None:intergenic | 40.0% | |
| ACTCTTCTCTCTCATCATCT+GGG | + | chr3_1:18174348-18174367 | None:intergenic | 40.0% | |
| ATATGAAACTGAAGACGACG+AGG | - | chr3_1:18174372-18174391 | Msa0351430:intron | 40.0% | |
| TATGAGGGATGATGATTCTG+AGG | - | chr3_1:18174417-18174436 | Msa0351430:intron | 40.0% | |
| !! | TGATTCTGAGGCAGAATATG+AGG | - | chr3_1:18174429-18174448 | Msa0351430:intron | 40.0% |
| AGAAAATGATGCTTCGGATG+AGG | - | chr3_1:18174480-18174499 | Msa0351430:intron | 40.0% | |
| ! | ATGTTGGGAACTTTGGAAGT+AGG | - | chr3_1:18174811-18174830 | Msa0351430:intron | 40.0% |
| ! | TGTTGGGAACTTTGGAAGTA+GGG | - | chr3_1:18174812-18174831 | Msa0351430:intron | 40.0% |
| !!! | CCGTTGTTTTTCCTCATCAA+CGG | + | chr3_1:18175090-18175109 | None:intergenic | 40.0% |
| ! | CCGTTGATGAGGAAAAACAA+CGG | - | chr3_1:18175087-18175106 | Msa0351430:intron | 40.0% |
| CATACATTAGTGCATTCCGT+AGG | + | chr3_1:18175458-18175477 | None:intergenic | 40.0% | |
| AAAAGGCAAGGCCAAAAAGA+AGG | - | chr3_1:18175561-18175580 | Msa0351430:CDS | 40.0% | |
| AAAGGCAAGGCCAAAAAGAA+GGG | - | chr3_1:18175562-18175581 | Msa0351430:CDS | 40.0% | |
| AAGGGGTTTGATTCTGATGA+AGG | - | chr3_1:18175580-18175599 | Msa0351430:CDS | 40.0% | |
| AAGGAAGGGGAAATTGCAAA+AGG | + | chr3_1:18175809-18175828 | None:intergenic | 40.0% | |
| AAAAAAAGGGAGGAAGGAAG+GGG | + | chr3_1:18175822-18175841 | None:intergenic | 40.0% | |
| GACTGAAAAATTCCTCAGCT+GGG | + | chr3_1:18176112-18176131 | None:intergenic | 40.0% | |
| AGACTGAAAAATTCCTCAGC+TGG | + | chr3_1:18176113-18176132 | None:intergenic | 40.0% | |
| GGTGGGAAAAGTGAAGAGAA+GGG | + | chr3_1:18168938-18168957 | None:intergenic | 45.0% | |
| ! | GAGAGAGCGTAGAAAAATGG+GGG | - | chr3_1:18168964-18168983 | Msa0351430:three_prime_UTR | 45.0% |
| ! | AGAGAGCGTAGAAAAATGGG+GGG | - | chr3_1:18168965-18168984 | Msa0351430:three_prime_UTR | 45.0% |
| AAATGGGGGGTGAAGAGAAA+CGG | - | chr3_1:18168978-18168997 | Msa0351430:three_prime_UTR | 45.0% | |
| TTTCACGCAGAAGCTAGCTA+GGG | + | chr3_1:18169163-18169182 | None:intergenic | 45.0% | |
| ATTTCACGCAGAAGCTAGCT+AGG | + | chr3_1:18169164-18169183 | None:intergenic | 45.0% | |
| GTATTGCAGGATGAAGGAGA+GGG | - | chr3_1:18169267-18169286 | Msa0351430:intron | 45.0% | |
| GTAGGGCAAGAAGTTGAAGA+GGG | - | chr3_1:18169294-18169313 | Msa0351430:intron | 45.0% | |
| CAAGAAGTTGAAGAGGGTGA+AGG | - | chr3_1:18169300-18169319 | Msa0351430:intron | 45.0% | |
| GAAGAAGAAGCAGAGAGTGA+AGG | - | chr3_1:18169348-18169367 | Msa0351430:CDS | 45.0% | |
| AGAGTGGAAGAAGAGAGTGA+AGG | - | chr3_1:18169393-18169412 | Msa0351430:CDS | 45.0% | |
| TGGAAGAAGAGAGTGAAGGT+AGG | - | chr3_1:18169397-18169416 | Msa0351430:CDS | 45.0% | |
| GGAAGAAGAGAGTGAAGGTA+GGG | - | chr3_1:18169398-18169417 | Msa0351430:CDS | 45.0% | |
| GAAGAAGAGAGTGAAGGTAG+GGG | - | chr3_1:18169399-18169418 | Msa0351430:CDS | 45.0% | |
| AAGAAGAGAGTGAAGGTAGG+GGG | - | chr3_1:18169400-18169419 | Msa0351430:CDS | 45.0% | |
| TGTCGTTACCAGTAAGCGTA+GGG | - | chr3_1:18169461-18169480 | Msa0351430:intron | 45.0% | |
| ATCAAGAAGGACTACACCAG+AGG | + | chr3_1:18169968-18169987 | None:intergenic | 45.0% | |
| CATAAAGCCAGTCCTTGTTG+TGG | - | chr3_1:18170068-18170087 | Msa0351430:intron | 45.0% | |
| ! | TAAAGCCAGTCCTTGTTGTG+GGG | - | chr3_1:18170070-18170089 | Msa0351430:intron | 45.0% |
| CGGCCAATCAACAGAATTGT+GGG | - | chr3_1:18170128-18170147 | Msa0351430:intron | 45.0% | |
| GTGCCCACAATTCTGTTGAT+TGG | + | chr3_1:18170134-18170153 | None:intergenic | 45.0% | |
| ! | TTTTGGTGAAGTTGAGCTGC+CGG | - | chr3_1:18170202-18170221 | Msa0351430:intron | 45.0% |
| ! | ATCTCGTGTATCGATGTGGT+TGG | + | chr3_1:18170321-18170340 | None:intergenic | 45.0% |
| ! | GTCAATCTCGTGTATCGATG+TGG | + | chr3_1:18170325-18170344 | None:intergenic | 45.0% |
| AGATTGACGACAAAGGACAG+AGG | - | chr3_1:18170337-18170356 | Msa0351430:intron | 45.0% | |
| GGACGAAAGTAGGTCTCAAA+AGG | + | chr3_1:18170491-18170510 | None:intergenic | 45.0% | |
| AAAGGACAGAGGACGAAAGT+AGG | + | chr3_1:18170348-18170367 | None:intergenic | 45.0% | |
| AGATTGACGACAAAGGACAG+AGG | + | chr3_1:18170337-18170356 | None:intergenic | 45.0% | |
| ! | ATCTTGTGTATCGGTGTAGC+TGG | - | chr3_1:18170528-18170547 | Msa0351430:CDS | 45.0% |
| GGTGTAGCTGGAAATGAAAC+TGG | - | chr3_1:18170540-18170559 | Msa0351430:CDS | 45.0% | |
| GGGCTGTCTAGCTAGATTAT+TGG | + | chr3_1:18170609-18170628 | None:intergenic | 45.0% | |
| GAAGAGGAATATTGGGCACT+TGG | + | chr3_1:18170749-18170768 | None:intergenic | 45.0% | |
| TGGTGAGAAGATGGAGCATA+GGG | + | chr3_1:18170807-18170826 | None:intergenic | 45.0% | |
| ATGGTGAGAAGATGGAGCAT+AGG | + | chr3_1:18170808-18170827 | None:intergenic | 45.0% | |
| ACATAGAGACGAAAGCAGAG+AGG | - | chr3_1:18170910-18170929 | Msa0351430:intron | 45.0% | |
| !! | AGAGGAGCTTCTAGGATTCA+AGG | - | chr3_1:18170928-18170947 | Msa0351430:intron | 45.0% |
| ATAATACTTGCGCTGTTGCC+GGG | + | chr3_1:18171160-18171179 | None:intergenic | 45.0% | |
| GATAATACTTGCGCTGTTGC+CGG | + | chr3_1:18171161-18171180 | None:intergenic | 45.0% | |
| ! | TCATGATTTGGATTCTGCCC+CGG | - | chr3_1:18171695-18171714 | Msa0351430:intron | 45.0% |
| CCGCAGTATATCTCTACAAC+AGG | + | chr3_1:18171892-18171911 | None:intergenic | 45.0% | |
| GTTGTAGAGATATACTGCGG+AGG | - | chr3_1:18171892-18171911 | Msa0351430:intron | 45.0% | |
| GCATCAGTATGAATCAGAGG+AGG | - | chr3_1:18171970-18171989 | Msa0351430:intron | 45.0% | |
| GAACATAGGTCTCCAACACA+AGG | + | chr3_1:18172093-18172112 | None:intergenic | 45.0% | |
| TCATCTGCCACACAAATGAG+AGG | + | chr3_1:18172453-18172472 | None:intergenic | 45.0% | |
| ! | AAACAAGAAGCGCATACGCT+TGG | - | chr3_1:18172570-18172589 | Msa0351430:intron | 45.0% |
| CTTACAGATGTTGTGCCATC+AGG | + | chr3_1:18172631-18172650 | None:intergenic | 45.0% | |
| ! | GTAATGGTTGCCACTTACCA+TGG | + | chr3_1:18172725-18172744 | None:intergenic | 45.0% |
| CCTAGTGGTCAAAGGCTTTA+TGG | + | chr3_1:18172779-18172798 | None:intergenic | 45.0% | |
| CCATAAAGCCTTTGACCACT+AGG | - | chr3_1:18172776-18172795 | Msa0351430:intron | 45.0% | |
| TAAAGCCTTTGACCACTAGG+TGG | - | chr3_1:18172779-18172798 | Msa0351430:intron | 45.0% | |
| AAAGCCTTTGACCACTAGGT+GGG | - | chr3_1:18172780-18172799 | Msa0351430:intron | 45.0% | |
| ATATATCCAACCCCACCTAG+TGG | + | chr3_1:18172794-18172813 | None:intergenic | 45.0% | |
| !! | CTAATGGTTTGGTCTACCAG+CGG | - | chr3_1:18172930-18172949 | Msa0351430:CDS | 45.0% |
| !! | TAATGGTTTGGTCTACCAGC+GGG | - | chr3_1:18172931-18172950 | Msa0351430:CDS | 45.0% |
| GACCAAGCCTAACAGGAAAA+AGG | + | chr3_1:18173003-18173022 | None:intergenic | 45.0% | |
| CAAGTGCACATAGTCCATTG+AGG | + | chr3_1:18173531-18173550 | None:intergenic | 45.0% | |
| CAGGGAATTCTGCAATCACA+AGG | - | chr3_1:18173555-18173574 | Msa0351430:intron | 45.0% | |
| GAATTCGACGACAAGGAAGA+GGG | + | chr3_1:18173609-18173628 | None:intergenic | 45.0% | |
| AGAATTCGACGACAAGGAAG+AGG | + | chr3_1:18173610-18173629 | None:intergenic | 45.0% | |
| CCTTGTCGTCGAATTCTCAT+CGG | - | chr3_1:18173613-18173632 | Msa0351430:intron | 45.0% | |
| !! | TGTTGACTCAAGGCAAAGGA+AGG | - | chr3_1:18173650-18173669 | Msa0351430:intron | 45.0% |
| AGGCTGAAAGTCAGACTATC+AGG | - | chr3_1:18173815-18173834 | Msa0351430:intron | 45.0% | |
| GGCTGAAAGTCAGACTATCA+GGG | - | chr3_1:18173816-18173835 | Msa0351430:intron | 45.0% | |
| ! | CTTACGGGTAAGAAGTACGT+TGG | + | chr3_1:18173842-18173861 | None:intergenic | 45.0% |
| ! | ATTCACCTTTTCGCGCTTAC+GGG | + | chr3_1:18173857-18173876 | None:intergenic | 45.0% |
| ! | GATTCACCTTTTCGCGCTTA+CGG | + | chr3_1:18173858-18173877 | None:intergenic | 45.0% |
| GTAAGCGCGAAAAGGTGAAT+CGG | - | chr3_1:18173857-18173876 | Msa0351430:intron | 45.0% | |
| GCTTCCTCATCCTGAAGAAA+GGG | + | chr3_1:18174072-18174091 | None:intergenic | 45.0% | |
| TGCTTCCTCATCCTGAAGAA+AGG | + | chr3_1:18174073-18174092 | None:intergenic | 45.0% | |
| AACACAGCGTCACTATGAAG+AGG | - | chr3_1:18174113-18174132 | Msa0351430:intron | 45.0% | |
| GACTCTTCTCTCTCATCATC+TGG | + | chr3_1:18174349-18174368 | None:intergenic | 45.0% | |
| AAGACGACGAGGAAGAAGAA+AGG | - | chr3_1:18174383-18174402 | Msa0351430:intron | 45.0% | |
| TGAGGCAGAATATGAGGATG+AGG | - | chr3_1:18174435-18174454 | Msa0351430:intron | 45.0% | |
| ! | GTTGGGAACTTTGGAAGTAG+GGG | - | chr3_1:18174813-18174832 | Msa0351430:intron | 45.0% |
| ! | TTGGGAACTTTGGAAGTAGG+GGG | - | chr3_1:18174814-18174833 | Msa0351430:intron | 45.0% |
| !! | GGTTGCGTTGGTTTCAGTTA+GGG | - | chr3_1:18174843-18174862 | Msa0351430:intron | 45.0% |
| ACATCTCTCAACCGTTGATG+AGG | - | chr3_1:18175076-18175095 | Msa0351430:intron | 45.0% | |
| TAGAGACCATGGCTGAAAGA+TGG | + | chr3_1:18175243-18175262 | None:intergenic | 45.0% | |
| ATCTTTCAGCCATGGTCTCT+AGG | - | chr3_1:18175242-18175261 | Msa0351430:intron | 45.0% | |
| CTAACTCTACCTAGAGACCA+TGG | + | chr3_1:18175254-18175273 | None:intergenic | 45.0% | |
| CATTAGTGCATTCCGTAGGT+GGG | + | chr3_1:18175454-18175473 | None:intergenic | 45.0% | |
| ACATTAGTGCATTCCGTAGG+TGG | + | chr3_1:18175455-18175474 | None:intergenic | 45.0% | |
| AAGGCAAGGCCAAAAAGAAG+GGG | - | chr3_1:18175563-18175582 | Msa0351430:CDS | 45.0% | |
| !! | GTTGTTGGTTTCTTAGGAGG+AGG | + | chr3_1:18175610-18175629 | None:intergenic | 45.0% |
| !! | TGGGTTGTTGGTTTCTTAGG+AGG | + | chr3_1:18175613-18175632 | None:intergenic | 45.0% |
| !! | CGATGGGTTGTTGGTTTCTT+AGG | + | chr3_1:18175616-18175635 | None:intergenic | 45.0% |
| CATAATTGTCATCCGGCGAT+GGG | + | chr3_1:18175632-18175651 | None:intergenic | 45.0% | |
| ACATAATTGTCATCCGGCGA+TGG | + | chr3_1:18175633-18175652 | None:intergenic | 45.0% | |
| !!! | CAATTATAAATATATTTTTT+TGG | + | chr3_1:18168805-18168824 | None:intergenic | 5.0% |
| !! | TAAAAAAAATTATACAAATT+TGG | + | chr3_1:18169781-18169800 | None:intergenic | 5.0% |
| GGGTGGGAAAAGTGAAGAGA+AGG | + | chr3_1:18168939-18168958 | None:intergenic | 50.0% | |
| TACGCTCTCTCTGTTTGGGT+GGG | + | chr3_1:18168955-18168974 | None:intergenic | 50.0% | |
| TCTCTTCGGAGATCAATCCG+AGG | - | chr3_1:18169018-18169037 | Msa0351430:three_prime_UTR | 50.0% | |
| GGTATTGCAGGATGAAGGAG+AGG | - | chr3_1:18169266-18169285 | Msa0351430:intron | 50.0% | |
| GGTAGGGCAAGAAGTTGAAG+AGG | - | chr3_1:18169293-18169312 | Msa0351430:intron | 50.0% | |
| AGAGGGTGAAGGAGAAGTTG+AGG | - | chr3_1:18169311-18169330 | Msa0351430:intron | 50.0% | |
| GAGGGTGAAGGAGAAGTTGA+GGG | - | chr3_1:18169312-18169331 | Msa0351430:intron | 50.0% | |
| AGGGTGAAGGAGAAGTTGAG+GGG | - | chr3_1:18169313-18169332 | Msa0351430:intron | 50.0% | |
| AGAGAGTGAAGGTGAGAGAG+AGG | - | chr3_1:18169359-18169378 | Msa0351430:CDS | 50.0% | |
| AGTGAAGGTGAGAGAGAGGT+TGG | - | chr3_1:18169363-18169382 | Msa0351430:CDS | 50.0% | |
| !! | AGAGGTTGGTGATCAGAGAG+TGG | - | chr3_1:18169377-18169396 | Msa0351430:CDS | 50.0% |
| AGAAGAGAGTGAAGGTAGGG+GGG | - | chr3_1:18169401-18169420 | Msa0351430:CDS | 50.0% | |
| ! | GTGTCGTTACCAGTAAGCGT+AGG | - | chr3_1:18169460-18169479 | Msa0351430:intron | 50.0% |
| AACGACATCCCTACGCTTAC+TGG | + | chr3_1:18169472-18169491 | None:intergenic | 50.0% | |
| CGTAGGGATGTCGTTGAAAG+TGG | - | chr3_1:18169477-18169496 | Msa0351430:intron | 50.0% | |
| ACAGCACCAACCCAACAATG+TGG | + | chr3_1:18169601-18169620 | None:intergenic | 50.0% | |
| GGAATCCTAGGTTCGAACTC+AGG | + | chr3_1:18169885-18169904 | None:intergenic | 50.0% | |
| GATGTGTGAGTCTAGCCACT+AGG | - | chr3_1:18169923-18169942 | Msa0351430:intron | 50.0% | |
| ! | AAAGCCAGTCCTTGTTGTGG+GGG | - | chr3_1:18170071-18170090 | Msa0351430:intron | 50.0% |
| CTCATAAACCCCCCACAACA+AGG | + | chr3_1:18170083-18170102 | None:intergenic | 50.0% | |
| GCGGCCAATCAACAGAATTG+TGG | - | chr3_1:18170127-18170146 | Msa0351430:intron | 50.0% | |
| TCAACAGAATTGTGGGCACC+AGG | - | chr3_1:18170135-18170154 | Msa0351430:intron | 50.0% | |
| CAACAGAATTGTGGGCACCA+GGG | - | chr3_1:18170136-18170155 | Msa0351430:intron | 50.0% | |
| TTTGGTGAAGTTGAGCTGCC+GGG | - | chr3_1:18170203-18170222 | Msa0351430:intron | 50.0% | |
| TTGGGCCCAAGATAGCAGAT+AGG | + | chr3_1:18170285-18170304 | None:intergenic | 50.0% | |
| GGGAATTGTAAACGGGGACT+AGG | + | chr3_1:18170787-18170806 | None:intergenic | 50.0% | |
| TGCTCCATCTTCTCACCATC+AGG | - | chr3_1:18170809-18170828 | Msa0351430:intron | 50.0% | |
| GAAAGCAGAGAGGAGCTTCT+AGG | - | chr3_1:18170920-18170939 | Msa0351430:intron | 50.0% | |
| ! | TCTGGTGATGTTGAGCTGCT+GGG | + | chr3_1:18170986-18171005 | None:intergenic | 50.0% |
| ! | TTCTGGTGATGTTGAGCTGC+TGG | + | chr3_1:18170987-18171006 | None:intergenic | 50.0% |
| CGGCCAATCAGCAGAATTGT+GGG | + | chr3_1:18171061-18171080 | None:intergenic | 50.0% | |
| CTCGTAAATCTCCCGCAACA+AGG | - | chr3_1:18171106-18171125 | Msa0351430:CDS | 50.0% | |
| TGTCTAAGTGCCAATCCACC+CGG | - | chr3_1:18171139-18171158 | Msa0351430:CDS | 50.0% | |
| GTAGAGATATACTGCGGAGG+AGG | - | chr3_1:18171895-18171914 | Msa0351430:intron | 50.0% | |
| AGATATACTGCGGAGGAGGA+AGG | - | chr3_1:18171899-18171918 | Msa0351430:intron | 50.0% | |
| GATATACTGCGGAGGAGGAA+GGG | - | chr3_1:18171900-18171919 | Msa0351430:intron | 50.0% | |
| TGAAAAGAGCTTGAGACCCG+AGG | - | chr3_1:18171928-18171947 | Msa0351430:intron | 50.0% | |
| AACACAAGGCAGACCTTTCC+TGG | + | chr3_1:18172079-18172098 | None:intergenic | 50.0% | |
| AGGAAAGGTCTGCCTTGTGT+TGG | - | chr3_1:18172078-18172097 | Msa0351430:intron | 50.0% | |
| AAGCCTTTGACCACTAGGTG+GGG | - | chr3_1:18172781-18172800 | Msa0351430:intron | 50.0% | |
| ACATGGTCCATGATCGAGCA+AGG | + | chr3_1:18172833-18172852 | None:intergenic | 50.0% | |
| ! | TACCAGCGGGTCTTTTCTAC+AGG | - | chr3_1:18172944-18172963 | Msa0351430:CDS | 50.0% |
| GCAATGCTCGCTTTGTAAGG+TGG | - | chr3_1:18173357-18173376 | Msa0351430:intron | 50.0% | |
| CGCTTTGTAAGGTGGTCTGA+TGG | - | chr3_1:18173365-18173384 | Msa0351430:intron | 50.0% | |
| CCGATGAGAATTCGACGACA+AGG | + | chr3_1:18173616-18173635 | None:intergenic | 50.0% | |
| TCTTACCCGTAAGCGCGAAA+AGG | - | chr3_1:18173849-18173868 | Msa0351430:intron | 50.0% | |
| TGCTCCCTTTCTTCAGGATG+AGG | - | chr3_1:18174065-18174084 | Msa0351430:intron | 50.0% | |
| CAGAAGTCCGAGCAGAGAAA+CGG | - | chr3_1:18174145-18174164 | Msa0351430:intron | 50.0% | |
| CATCATCTGGGTAACCCACT+TGG | + | chr3_1:18174336-18174355 | None:intergenic | 50.0% | |
| AAAGGCCTCGTTCTCGTATG+AGG | - | chr3_1:18174401-18174420 | Msa0351430:intron | 50.0% | |
| AAGGCCTCGTTCTCGTATGA+GGG | - | chr3_1:18174402-18174421 | Msa0351430:intron | 50.0% | |
| TCATCCCTCATACGAGAACG+AGG | + | chr3_1:18174409-18174428 | None:intergenic | 50.0% | |
| TTCGGATGAGGACGAAGATG+AGG | - | chr3_1:18174492-18174511 | Msa0351430:intron | 50.0% | |
| ! | TGGGAACTTTGGAAGTAGGG+GGG | - | chr3_1:18174815-18174834 | Msa0351430:intron | 50.0% |
| ACTGAAACCAACGCAACCCA+TGG | + | chr3_1:18174841-18174860 | None:intergenic | 50.0% | |
| !! | GGGTTGCGTTGGTTTCAGTT+AGG | - | chr3_1:18174842-18174861 | Msa0351430:intron | 50.0% |
| GAGTGACCATCTTTCAGCCA+TGG | - | chr3_1:18175234-18175253 | Msa0351430:intron | 50.0% | |
| ! | TCTGTTAGGTTGCCCACCTA+CGG | - | chr3_1:18175439-18175458 | Msa0351430:intron | 50.0% |
| AGAAACCAACAACCCATCGC+CGG | - | chr3_1:18175617-18175636 | Msa0351430:CDS | 50.0% | |
| CTACGCTCTCTCTGTTTGGG+TGG | + | chr3_1:18168956-18168975 | None:intergenic | 55.0% | |
| CTTCGGAGATCAATCCGAGG+AGG | - | chr3_1:18169021-18169040 | Msa0351430:three_prime_UTR | 55.0% | |
| TTGCAGGATGAAGGAGAGGG+AGG | - | chr3_1:18169270-18169289 | Msa0351430:intron | 55.0% | |
| TGCAGGATGAAGGAGAGGGA+GGG | - | chr3_1:18169271-18169290 | Msa0351430:intron | 55.0% | |
| ATGAAGGAGAGGGAGGGGTA+GGG | - | chr3_1:18169277-18169296 | Msa0351430:intron | 55.0% | |
| TGAAGGAGAAGTTGAGGGGC+AGG | - | chr3_1:18169317-18169336 | Msa0351430:intron | 55.0% | |
| GAAGGAGAAGTTGAGGGGCA+GGG | - | chr3_1:18169318-18169337 | Msa0351430:intron | 55.0% | |
| CAGCAGCTAGAAGAAGCCTG+AGG | - | chr3_1:18169529-18169548 | Msa0351430:intron | 55.0% | |
| TGGAGAAGCGGCACACTATG+TGG | - | chr3_1:18169665-18169684 | Msa0351430:intron | 55.0% | |
| ATGGGCCTGAGTTCGAACCT+AGG | - | chr3_1:18169877-18169896 | Msa0351430:intron | 55.0% | |
| ! | AAGCCAGTCCTTGTTGTGGG+GGG | - | chr3_1:18170072-18170091 | Msa0351430:intron | 55.0% |
| AAACCCCCCACAACAAGGAC+TGG | + | chr3_1:18170078-18170097 | None:intergenic | 55.0% | |
| ! | TGTTGATTGGCCGCGATCCT+CGG | + | chr3_1:18170121-18170140 | None:intergenic | 55.0% |
| CGCAAAGAGTAGCAGTGTCC+AGG | + | chr3_1:18170229-18170248 | None:intergenic | 55.0% | |
| GCGCCCACAATTCTGCTGAT+TGG | - | chr3_1:18171055-18171074 | Msa0351430:intron | 55.0% | |
| GCGGCCAATCAGCAGAATTG+TGG | + | chr3_1:18171062-18171081 | None:intergenic | 55.0% | |
| TAAGCCACTTGGGCCACCAT+TGG | - | chr3_1:18172018-18172037 | Msa0351430:intron | 55.0% | |
| AACTCCAATGGTGGCCCAAG+TGG | + | chr3_1:18172025-18172044 | None:intergenic | 55.0% | |
| TTTCCTGGAAGAGCTGGTGG+TGG | + | chr3_1:18172064-18172083 | None:intergenic | 55.0% | |
| ACCACCAGCTCTTCCAGGAA+AGG | - | chr3_1:18172063-18172082 | Msa0351430:intron | 55.0% | |
| ACCTTTCCTGGAAGAGCTGG+TGG | + | chr3_1:18172067-18172086 | None:intergenic | 55.0% | |
| CAGACCTTTCCTGGAAGAGC+TGG | + | chr3_1:18172070-18172089 | None:intergenic | 55.0% | |
| CAACCCCACCTAGTGGTCAA+AGG | + | chr3_1:18172787-18172806 | None:intergenic | 55.0% | |
| CTTTGACCACTAGGTGGGGT+TGG | - | chr3_1:18172785-18172804 | Msa0351430:intron | 55.0% | |
| GATGCCACCTTGCTCGATCA+TGG | - | chr3_1:18172823-18172842 | Msa0351430:intron | 55.0% | |
| TGGTCCATGATCGAGCAAGG+TGG | + | chr3_1:18172830-18172849 | None:intergenic | 55.0% | |
| CACCTGTAGAAAAGACCCGC+TGG | + | chr3_1:18172949-18172968 | None:intergenic | 55.0% | |
| ! | CGGGTCTTTTCTACAGGTGC+TGG | - | chr3_1:18172950-18172969 | Msa0351430:CDS | 55.0% |
| AGTTGACGCCTCCTCTCAGT+TGG | + | chr3_1:18173892-18173911 | None:intergenic | 55.0% | |
| !! | AGGAGGCGTCAACTTTCTCC+TGG | - | chr3_1:18173898-18173917 | Msa0351430:intron | 55.0% |
| !! | GGAGGCGTCAACTTTCTCCT+GGG | - | chr3_1:18173899-18173918 | Msa0351430:intron | 55.0% |
| GGCTTACGAGGGATGCTCTT+TGG | + | chr3_1:18174280-18174299 | None:intergenic | 55.0% | |
| GGAGGAACGATGGCTTACGA+GGG | + | chr3_1:18174291-18174310 | None:intergenic | 55.0% | |
| TTTGCTGGTGGGAGGAACGA+TGG | + | chr3_1:18174301-18174320 | None:intergenic | 55.0% | |
| TCCCACCAGCAAAATCCTCC+CGG | - | chr3_1:18174308-18174327 | Msa0351430:intron | 55.0% | |
| AAAATCCTCCCGGCACCAAG+TGG | - | chr3_1:18174318-18174337 | Msa0351430:intron | 55.0% | |
| AAATCCTCCCGGCACCAAGT+GGG | - | chr3_1:18174319-18174338 | Msa0351430:intron | 55.0% | |
| TTTGGAAGTAGGGGGGCCAT+GGG | - | chr3_1:18174822-18174841 | Msa0351430:intron | 55.0% | |
| ATTCCTCAGCTGGGTTCCCT+TGG | + | chr3_1:18176103-18176122 | None:intergenic | 55.0% | |
| GCAGGATGAAGGAGAGGGAG+GGG | - | chr3_1:18169272-18169291 | Msa0351430:intron | 60.0% | |
| GATGAAGGAGAGGGAGGGGT+AGG | - | chr3_1:18169276-18169295 | Msa0351430:intron | 60.0% | |
| AGAAGTTGAGGGGCAGGGAG+AGG | - | chr3_1:18169323-18169342 | Msa0351430:intron | 60.0% | |
| ! | AGAACCGACTCTGACAGCCG+AGG | - | chr3_1:18170101-18170120 | Msa0351430:intron | 60.0% |
| CGATCCTCGGCTGTCAGAGT+CGG | + | chr3_1:18171081-18171100 | None:intergenic | 60.0% | |
| ACTCTGACAGCCGAGGATCG+CGG | - | chr3_1:18170108-18170127 | Msa0351430:intron | 60.0% | |
| AGAGTAGCAGTGTCCAGGCC+CGG | + | chr3_1:18170224-18170243 | None:intergenic | 60.0% | |
| TGATGTTGAGCTGCTGGGCC+TGG | + | chr3_1:18170981-18171000 | None:intergenic | 60.0% | |
| CAGCAGAATTGTGGGCGCCA+GGG | + | chr3_1:18171053-18171072 | None:intergenic | 60.0% | |
| TCAGCAGAATTGTGGGCGCC+AGG | + | chr3_1:18171054-18171073 | None:intergenic | 60.0% | |
| ! | TGCTGATTGGCCGCGATCCT+CGG | - | chr3_1:18171068-18171087 | Msa0351430:CDS | 60.0% |
| ACTCTGACAGCCGAGGATCG+CGG | + | chr3_1:18170108-18170127 | None:intergenic | 60.0% | |
| CGATCCTCGGCTGTCAGAGT+CGG | - | chr3_1:18171081-18171100 | Msa0351430:CDS | 60.0% | |
| ! | AGAACCGACTCTGACAGCCG+AGG | + | chr3_1:18170101-18170120 | None:intergenic | 60.0% |
| ATACTTGCGCTGTTGCCGGG+TGG | + | chr3_1:18171157-18171176 | None:intergenic | 60.0% | |
| TATGGGGTACGCAGCTCAGC+AGG | - | chr3_1:18171761-18171780 | Msa0351430:intron | 60.0% | |
| !! | AGAGCTGGTGGTGGACGTAG+TGG | + | chr3_1:18172055-18172074 | None:intergenic | 60.0% |
| GGGAGGAACGATGGCTTACG+AGG | + | chr3_1:18174292-18174311 | None:intergenic | 60.0% | |
| ! | GGGAGGATTTTGCTGGTGGG+AGG | + | chr3_1:18174309-18174328 | None:intergenic | 60.0% |
| ! | GCCGGGAGGATTTTGCTGGT+GGG | + | chr3_1:18174312-18174331 | None:intergenic | 60.0% |
| ! | TGCCGGGAGGATTTTGCTGG+TGG | + | chr3_1:18174313-18174332 | None:intergenic | 60.0% |
| !! | TGGTGCCGGGAGGATTTTGC+TGG | + | chr3_1:18174316-18174335 | None:intergenic | 60.0% |
| !! | TGGGTAACCCACTTGGTGCC+GGG | + | chr3_1:18174329-18174348 | None:intergenic | 60.0% |
| !! | CTGGGTAACCCACTTGGTGC+CGG | + | chr3_1:18174330-18174349 | None:intergenic | 60.0% |
| ! | CTTTGGAAGTAGGGGGGCCA+TGG | - | chr3_1:18174821-18174840 | Msa0351430:intron | 60.0% |
| !! | GTCATCCGGCGATGGGTTGT+TGG | + | chr3_1:18175625-18175644 | None:intergenic | 60.0% |
| ACTCCAAGGGAACCCAGCTG+AGG | - | chr3_1:18176097-18176116 | Msa0351430:five_prime_UTR | 60.0% | |
| TGAAGTTGAGCTGCCGGGCC+TGG | - | chr3_1:18170208-18170227 | Msa0351430:intron | 65.0% | |
| CGCAGAGAGCAGCAGTGTCC+AGG | - | chr3_1:18170960-18170979 | Msa0351430:intron | 65.0% | |
| TGCGCTGTTGCCGGGTGGAT+TGG | + | chr3_1:18171152-18171171 | None:intergenic | 65.0% | |
| CGTCCACCACCAGCTCTTCC+AGG | - | chr3_1:18172058-18172077 | Msa0351430:intron | 65.0% | |
| !! | GTAACCCACTTGGTGCCGGG+AGG | + | chr3_1:18174326-18174345 | None:intergenic | 65.0% |
| ! | AGGGGGGCCATGGGTTGCGT+TGG | - | chr3_1:18174831-18174850 | Msa0351430:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 18168786 | 18176220 | 18168786 | ID=Msa0351430;Name=Msa0351430 |
| chr3_1 | mRNA | 18168786 | 18176220 | 18168786 | ID=Msa0351430-mRNA-1;Parent=Msa0351430;Name=Msa0351430-mRNA-1;_AED=0.06;_eAED=0.06;_QI=194|1|1|1|0.90|0.83|12|321|606 |
| chr3_1 | exon | 18168786 | 18169100 | 18168786 | ID=Msa0351430-mRNA-1:exon:4302;Parent=Msa0351430-mRNA-1 |
| chr3_1 | exon | 18169328 | 18169471 | 18169328 | ID=Msa0351430-mRNA-1:exon:4301;Parent=Msa0351430-mRNA-1 |
| chr3_1 | exon | 18170493 | 18170738 | 18170493 | ID=Msa0351430-mRNA-1:exon:4300;Parent=Msa0351430-mRNA-1 |
| chr3_1 | exon | 18170821 | 18170925 | 18170821 | ID=Msa0351430-mRNA-1:exon:4299;Parent=Msa0351430-mRNA-1 |
| chr3_1 | exon | 18171061 | 18171189 | 18171061 | ID=Msa0351430-mRNA-1:exon:4298;Parent=Msa0351430-mRNA-1 |
| chr3_1 | exon | 18171269 | 18171448 | 18171269 | ID=Msa0351430-mRNA-1:exon:4297;Parent=Msa0351430-mRNA-1 |
| chr3_1 | exon | 18171525 | 18171656 | 18171525 | ID=Msa0351430-mRNA-1:exon:4296;Parent=Msa0351430-mRNA-1 |
| chr3_1 | exon | 18172361 | 18172537 | 18172361 | ID=Msa0351430-mRNA-1:exon:4295;Parent=Msa0351430-mRNA-1 |
| chr3_1 | exon | 18172922 | 18173107 | 18172922 | ID=Msa0351430-mRNA-1:exon:4294;Parent=Msa0351430-mRNA-1 |
| chr3_1 | exon | 18173203 | 18173341 | 18173203 | ID=Msa0351430-mRNA-1:exon:4293;Parent=Msa0351430-mRNA-1 |
| chr3_1 | exon | 18175456 | 18175730 | 18175456 | ID=Msa0351430-mRNA-1:exon:4292;Parent=Msa0351430-mRNA-1 |
| chr3_1 | exon | 18175913 | 18176220 | 18175913 | ID=Msa0351430-mRNA-1:exon:4291;Parent=Msa0351430-mRNA-1 |
| chr3_1 | five_prime_UTR | 18176027 | 18176220 | 18176027 | ID=Msa0351430-mRNA-1:five_prime_utr;Parent=Msa0351430-mRNA-1 |
| chr3_1 | CDS | 18175913 | 18176026 | 18175913 | ID=Msa0351430-mRNA-1:cds;Parent=Msa0351430-mRNA-1 |
| chr3_1 | CDS | 18175456 | 18175730 | 18175456 | ID=Msa0351430-mRNA-1:cds;Parent=Msa0351430-mRNA-1 |
| chr3_1 | CDS | 18173203 | 18173341 | 18173203 | ID=Msa0351430-mRNA-1:cds;Parent=Msa0351430-mRNA-1 |
| chr3_1 | CDS | 18172922 | 18173107 | 18172922 | ID=Msa0351430-mRNA-1:cds;Parent=Msa0351430-mRNA-1 |
| chr3_1 | CDS | 18172361 | 18172537 | 18172361 | ID=Msa0351430-mRNA-1:cds;Parent=Msa0351430-mRNA-1 |
| chr3_1 | CDS | 18171525 | 18171656 | 18171525 | ID=Msa0351430-mRNA-1:cds;Parent=Msa0351430-mRNA-1 |
| chr3_1 | CDS | 18171269 | 18171448 | 18171269 | ID=Msa0351430-mRNA-1:cds;Parent=Msa0351430-mRNA-1 |
| chr3_1 | CDS | 18171061 | 18171189 | 18171061 | ID=Msa0351430-mRNA-1:cds;Parent=Msa0351430-mRNA-1 |
| chr3_1 | CDS | 18170821 | 18170925 | 18170821 | ID=Msa0351430-mRNA-1:cds;Parent=Msa0351430-mRNA-1 |
| chr3_1 | CDS | 18170493 | 18170738 | 18170493 | ID=Msa0351430-mRNA-1:cds;Parent=Msa0351430-mRNA-1 |
| chr3_1 | CDS | 18169334 | 18169471 | 18169334 | ID=Msa0351430-mRNA-1:cds;Parent=Msa0351430-mRNA-1 |
| chr3_1 | three_prime_UTR | 18169328 | 18169333 | 18169328 | ID=Msa0351430-mRNA-1:three_prime_utr;Parent=Msa0351430-mRNA-1 |
| chr3_1 | three_prime_UTR | 18168786 | 18169100 | 18168786 | ID=Msa0351430-mRNA-1:three_prime_utr;Parent=Msa0351430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
