Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0351470 | XP_013459093.2 | 97.858 | 607 | 12 | 1 | 1 | 606 | 1 | 607 | 0.0 | 1192 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0351470 | sp|Q9FNQ0|VIP4_ARATH | 53.386 | 635 | 247 | 18 | 5 | 605 | 5 | 624 | 1.40e-148 | 446 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0351470 | A0A396IKI1 | 97.858 | 607 | 12 | 1 | 1 | 606 | 1 | 607 | 0.0 | 1192 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0351430 | Msa0351470 | 0.968542 | 7.972675e-129 | -8.615850e-47 |
| Msa0351470 | Msa0398670 | 0.815296 | 9.939312e-52 | -8.615850e-47 |
| Msa0351470 | Msa0493740 | 0.800868 | 1.177937e-48 | -8.615850e-47 |
| Msa0351470 | Msa1175100 | 0.801727 | 7.854874e-49 | -8.615850e-47 |
| Msa0351470 | Msa1234470 | 0.815530 | 8.819512e-52 | -8.615850e-47 |
| Msa0351470 | Msa1306960 | 0.801240 | 9.887070e-49 | -8.615850e-47 |
| Msa0351470 | Msa1440200 | 0.810641 | 1.041994e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0351470 | MtrunA17_Chr3g0086581 | 97.858 | 607 | 12 | 1 | 1 | 606 | 1 | 607 | 0.0 | 1192 |
| Msa0351470 | MtrunA17_Chr3g0086571 | 97.529 | 607 | 14 | 1 | 1 | 606 | 1 | 607 | 0.0 | 1187 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0351470 | AT5G61150.2 | 53.555 | 633 | 247 | 18 | 5 | 605 | 5 | 622 | 6.28e-150 | 446 |
| Msa0351470 | AT5G61150.1 | 53.386 | 635 | 247 | 18 | 5 | 605 | 5 | 624 | 1.42e-149 | 446 |
Find 178 sgRNAs with CRISPR-Local
Find 559 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGATGGGTTGTTGGTTTCTT+AGG | 0.176435 | 3_1:-18273706 | None:intergenic |
| ACCTTTGTAACTGATGAATT+TGG | 0.177630 | 3_1:+18270640 | Msa0351470:CDS |
| CTTTGATACTTTACAATATA+TGG | 0.179403 | 3_1:+18274261 | Msa0351470:three_prime_UTR |
| AGGATCTTGCAATTGGAATT+TGG | 0.188152 | 3_1:+18274082 | Msa0351470:three_prime_UTR |
| TGATGATGAAGAGGAGGATA+TGG | 0.211401 | 3_1:+18269836 | Msa0351470:CDS |
| TGCTTCTTCTTCTATAATTC+AGG | 0.215111 | 3_1:+18274062 | Msa0351470:three_prime_UTR |
| TCTTCTTCTTCATATGTTCT+AGG | 0.236300 | 3_1:-18270616 | None:intergenic |
| GACTCTTCTCTCTCATCATC+TGG | 0.245899 | 3_1:-18272439 | None:intergenic |
| ATTCTGATCTTTGTCATCTC+TGG | 0.249219 | 3_1:-18269766 | None:intergenic |
| GTTCTAGGATCAAATGGTTT+TGG | 0.256215 | 3_1:-18270601 | None:intergenic |
| AACGACATCCCTACGCTTAC+TGG | 0.260769 | 3_1:-18267562 | None:intergenic |
| CAAAAGAGTAAGAATTTAAA+AGG | 0.287582 | 3_1:+18273637 | Msa0351470:CDS |
| AATTCACCTTTCCATGTCTA+AGG | 0.291409 | 3_1:-18271559 | None:intergenic |
| AACACAAGGCAGACCTTTCC+TGG | 0.291986 | 3_1:-18270169 | None:intergenic |
| CCGGAAATTCGTGATGTATT+TGG | 0.297525 | 3_1:+18269807 | Msa0351470:CDS |
| CCAAATACATCACGAATTTC+CGG | 0.297709 | 3_1:-18269807 | None:intergenic |
| AGGCTGAAAGTCAGACTATC+AGG | 0.307554 | 3_1:+18271908 | Msa0351470:intron |
| GGCTTACGAGGGATGCTCTT+TGG | 0.310503 | 3_1:-18272370 | None:intergenic |
| TGGATCAACTCCCATGATAT+TGG | 0.314016 | 3_1:-18270581 | None:intergenic |
| ACGCTGATTGTAATCATCTT+TGG | 0.335207 | 3_1:-18267532 | None:intergenic |
| CAAAGATCAGAATCATGATT+TGG | 0.338229 | 3_1:+18269776 | Msa0351470:CDS |
| TTTCTACGCTCTCTCTGTTT+GGG | 0.341598 | 3_1:-18267049 | None:intergenic |
| ATAATTCAGGATCTTGCAAT+TGG | 0.359118 | 3_1:+18274075 | Msa0351470:three_prime_UTR |
| AGGAGGCGTCAACTTTCTCC+TGG | 0.360444 | 3_1:+18271991 | Msa0351470:CDS |
| GGAAGCCTTCAGTTATTGAT+TGG | 0.366509 | 3_1:+18271479 | Msa0351470:CDS |
| TGAAGGAGAAGTTGAGGGGC+AGG | 0.380719 | 3_1:+18267410 | Msa0351470:CDS |
| GATGATGAAGAGGAGGATAT+GGG | 0.386378 | 3_1:+18269837 | Msa0351470:CDS |
| CGTCCACCACCAGCTCTTCC+AGG | 0.388905 | 3_1:+18270151 | Msa0351470:CDS |
| AGAAGTTGAGGGGCAGGGAG+AGG | 0.401701 | 3_1:+18267416 | Msa0351470:CDS |
| GTTTAAAGTTTCCAATATCA+TGG | 0.404176 | 3_1:+18270570 | Msa0351470:CDS |
| AGTGAAGGTGAGAGAGAGGT+TGG | 0.405162 | 3_1:+18267456 | Msa0351470:CDS |
| CTTACAGATGTTGTGCCATC+AGG | 0.408963 | 3_1:-18270721 | None:intergenic |
| ATATGTTGTAAAATATTGTA+AGG | 0.416641 | 3_1:-18274228 | None:intergenic |
| GCAGGATGAAGGAGAGGGAG+GGG | 0.417436 | 3_1:+18267365 | Msa0351470:intron |
| CAAATACATCACGAATTTCC+GGG | 0.420870 | 3_1:-18269806 | None:intergenic |
| GTCATCCGGCGATGGGTTGT+TGG | 0.424310 | 3_1:-18273715 | None:intergenic |
| AAAGGCCTCGTTCTCGTATG+AGG | 0.428907 | 3_1:+18272494 | Msa0351470:CDS |
| TTGAGGATTGGATTCATGTT+CGG | 0.429047 | 3_1:-18267155 | None:intergenic |
| ATTCCTCAGCTGGGTTCCCT+TGG | 0.430591 | 3_1:-18274193 | None:intergenic |
| TTCTGATCTTTGTCATCTCT+GGG | 0.431966 | 3_1:-18269765 | None:intergenic |
| TACAGAATTGAGTTGAGGAT+TGG | 0.437265 | 3_1:-18267167 | None:intergenic |
| TCATATGTTCTAGGATCAAA+TGG | 0.439874 | 3_1:-18270607 | None:intergenic |
| GATGAAGGAGAGGGAGGGGT+AGG | 0.441542 | 3_1:+18267369 | Msa0351470:CDS |
| GGAAGAAGAGAGTGAAGGTA+GGG | 0.445901 | 3_1:+18267491 | Msa0351470:CDS |
| TCATAATCCGTTTCTCTGCT+CGG | 0.449720 | 3_1:-18272245 | None:intergenic |
| TGGATCTGATGATGATGAAC+AGG | 0.450572 | 3_1:+18267590 | Msa0351470:CDS |
| TGGAAGAAGAGAGTGAAGGT+AGG | 0.450961 | 3_1:+18267490 | Msa0351470:CDS |
| GAAGCCTTCAGTTATTGATT+GGG | 0.452323 | 3_1:+18271480 | Msa0351470:CDS |
| AAAGCAATGCTCGCTTTGTA+AGG | 0.456005 | 3_1:+18271447 | Msa0351470:CDS |
| GGAGAAAGAAGAAAAGGAAA+AGG | 0.456578 | 3_1:+18271809 | Msa0351470:CDS |
| CTGGGTAACCCACTTGGTGC+CGG | 0.457697 | 3_1:-18272420 | None:intergenic |
| TGCTCTTGTATTTCTAATGA+CGG | 0.458635 | 3_1:+18274114 | Msa0351470:three_prime_UTR |
| GAGGGTGAAGGAGAAGTTGA+GGG | 0.462675 | 3_1:+18267405 | Msa0351470:CDS |
| TGAGAGGGAGAAAGAAGAAA+AGG | 0.465807 | 3_1:+18271803 | Msa0351470:CDS |
| AGAAGAGAGTGAAGGTAGGG+GGG | 0.466996 | 3_1:+18267494 | Msa0351470:CDS |
| AAGGGGTTTGATTCTGATGA+AGG | 0.470795 | 3_1:+18273673 | Msa0351470:CDS |
| AGAGAGTGAAGGTGAGAGAG+AGG | 0.471012 | 3_1:+18267452 | Msa0351470:CDS |
| AAGTTCATCTTCTTCCTCCT+CGG | 0.471897 | 3_1:-18267128 | None:intergenic |
| AGAACAAGAAAATGATGCTT+CGG | 0.474694 | 3_1:+18272567 | Msa0351470:CDS |
| CATCATCTGGGTAACCCACT+TGG | 0.477731 | 3_1:-18272426 | None:intergenic |
| TACAATATATGGATTAAAAG+AGG | 0.480504 | 3_1:+18274272 | Msa0351470:three_prime_UTR |
| TACGCTCTCTCTGTTTGGGT+GGG | 0.484409 | 3_1:-18267045 | None:intergenic |
| GAAGAAGAGAGTGAAGGTAG+GGG | 0.484413 | 3_1:+18267492 | Msa0351470:CDS |
| CCTTGTCGTCGAATTCTCAT+CGG | 0.488466 | 3_1:+18271706 | Msa0351470:CDS |
| TTCATCAGCAAGTATATCCT+CGG | 0.493150 | 3_1:-18270038 | None:intergenic |
| AGAGGGTGAAGGAGAAGTTG+AGG | 0.494925 | 3_1:+18267404 | Msa0351470:CDS |
| AAGAAGAGAGTGAAGGTAGG+GGG | 0.497291 | 3_1:+18267493 | Msa0351470:CDS |
| CAGATGATGCAGAATCTCTT+CGG | 0.498212 | 3_1:+18267097 | Msa0351470:CDS |
| CGTAGGGATGTCGTTGAAAG+TGG | 0.500557 | 3_1:+18267570 | Msa0351470:CDS |
| TATGGGGTACGCAGCTCAGC+AGG | 0.501010 | 3_1:+18269854 | Msa0351470:CDS |
| TGGGTAACCCACTTGGTGCC+GGG | 0.501264 | 3_1:-18272419 | None:intergenic |
| ACATAATTGTCATCCGGCGA+TGG | 0.502431 | 3_1:-18273723 | None:intergenic |
| TTTAGAGGATGCTTTGGATG+AGG | 0.502707 | 3_1:+18272017 | Msa0351470:CDS |
| CTACGCTCTCTCTGTTTGGG+TGG | 0.502714 | 3_1:-18267046 | None:intergenic |
| GATATACTGCGGAGGAGGAA+GGG | 0.503732 | 3_1:+18269993 | Msa0351470:CDS |
| TAAGCCACTTGGGCCACCAT+TGG | 0.504404 | 3_1:+18270111 | Msa0351470:CDS |
| TTGCAGGATGAAGGAGAGGG+AGG | 0.504951 | 3_1:+18267363 | Msa0351470:intron |
| TCTTACCCGTAAGCGCGAAA+AGG | 0.506454 | 3_1:+18271942 | Msa0351470:CDS |
| GTTGTTGGTTTCTTAGGAGG+AGG | 0.507805 | 3_1:-18273700 | None:intergenic |
| TTTAAAGTTTCCAATATCAT+GGG | 0.510569 | 3_1:+18270571 | Msa0351470:CDS |
| GGGTGGGAAAAGTGAAGAGA+AGG | 0.510570 | 3_1:-18267029 | None:intergenic |
| TGCAGGATGAAGGAGAGGGA+GGG | 0.511951 | 3_1:+18267364 | Msa0351470:intron |
| TCCAAATTCATCAGTTACAA+AGG | 0.512124 | 3_1:-18270641 | None:intergenic |
| CGCTTTGTAAGGTGGTCTGA+TGG | 0.512150 | 3_1:+18271458 | Msa0351470:CDS |
| AGATATACTGCGGAGGAGGA+AGG | 0.512709 | 3_1:+18269992 | Msa0351470:CDS |
| GGTAGGGCAAGAAGTTGAAG+AGG | 0.514949 | 3_1:+18267386 | Msa0351470:CDS |
| AAAGATGTGCTTGATCATGC+TGG | 0.515881 | 3_1:-18271535 | None:intergenic |
| CAGAAGTCCGAGCAGAGAAA+CGG | 0.518664 | 3_1:+18272238 | Msa0351470:CDS |
| ACGGATTATGAATGCTAAGA+AGG | 0.519536 | 3_1:+18272257 | Msa0351470:CDS |
| AAACAAGAAGCGCATACGCT+TGG | 0.520008 | 3_1:+18270663 | Msa0351470:CDS |
| ATGAAGGAGAGGGAGGGGTA+GGG | 0.523344 | 3_1:+18267370 | Msa0351470:CDS |
| ACCTTTCCTGGAAGAGCTGG+TGG | 0.524128 | 3_1:-18270157 | None:intergenic |
| AGAGGTTGGTGATCAGAGAG+TGG | 0.525201 | 3_1:+18267470 | Msa0351470:CDS |
| GAAGGAGAAGTTGAGGGGCA+GGG | 0.526782 | 3_1:+18267411 | Msa0351470:CDS |
| ACTCTTCTCTCTCATCATCT+GGG | 0.528829 | 3_1:-18272438 | None:intergenic |
| CAGACCTTTCCTGGAAGAGC+TGG | 0.530664 | 3_1:-18270160 | None:intergenic |
| AATCACAAGGACAACTATCA+AGG | 0.532097 | 3_1:+18271661 | Msa0351470:CDS |
| TTTCCTGGAAGAGCTGGTGG+TGG | 0.533508 | 3_1:-18270154 | None:intergenic |
| TGGGTTGTTGGTTTCTTAGG+AGG | 0.534824 | 3_1:-18273703 | None:intergenic |
| TCATGATTTGGATTCTGCCC+CGG | 0.536557 | 3_1:+18269788 | Msa0351470:CDS |
| AGAATTCGACGACAAGGAAG+AGG | 0.537175 | 3_1:-18271700 | None:intergenic |
| AGTTGACGCCTCCTCTCAGT+TGG | 0.539785 | 3_1:-18271982 | None:intergenic |
| GAGTAAGAATTTAAAAGGCA+AGG | 0.540581 | 3_1:+18273642 | Msa0351470:CDS |
| TAACTGCAATTGTTGACTCA+AGG | 0.540824 | 3_1:+18271733 | Msa0351470:CDS |
| TGAGGCAGAATATGAGGATG+AGG | 0.541830 | 3_1:+18272528 | Msa0351470:CDS |
| AGTTCTTGACATATCTGAGC+AGG | 0.543098 | 3_1:+18271508 | Msa0351470:CDS |
| GGTGGGAAAAGTGAAGAGAA+GGG | 0.544645 | 3_1:-18267028 | None:intergenic |
| ATGATGAAGAGGAGGATATG+GGG | 0.546074 | 3_1:+18269838 | Msa0351470:CDS |
| AGAACAATATTGTACGTTGG+AGG | 0.547091 | 3_1:+18270686 | Msa0351470:CDS |
| GGAGGCGTCAACTTTCTCCT+GGG | 0.547641 | 3_1:+18271992 | Msa0351470:CDS |
| TGTCAGACATAATTGTCATC+CGG | 0.549082 | 3_1:-18273729 | None:intergenic |
| GGTATTGCAGGATGAAGGAG+AGG | 0.549776 | 3_1:+18267359 | Msa0351470:intron |
| CACAAGTTCTAAGCTCAAAA+CGG | 0.552860 | 3_1:+18266993 | Msa0351470:five_prime_UTR |
| AGAAAATGATGCTTCGGATG+AGG | 0.553139 | 3_1:+18272573 | Msa0351470:CDS |
| AACTCCAATGGTGGCCCAAG+TGG | 0.555431 | 3_1:-18270115 | None:intergenic |
| CAAGAAGTTGAAGAGGGTGA+AGG | 0.556138 | 3_1:+18267393 | Msa0351470:CDS |
| TGATTCTGAGGCAGAATATG+AGG | 0.556925 | 3_1:+18272522 | Msa0351470:CDS |
| GGGAGGAACGATGGCTTACG+AGG | 0.557278 | 3_1:-18272382 | None:intergenic |
| GTAGAGATATACTGCGGAGG+AGG | 0.561855 | 3_1:+18269988 | Msa0351470:intron |
| TCCCACCAGCAAAATCCTCC+CGG | 0.563107 | 3_1:+18272401 | Msa0351470:CDS |
| AATCTTACAGAATTGAGTTG+AGG | 0.563407 | 3_1:-18267172 | None:intergenic |
| GAAGAAGAAGCAGAGAGTGA+AGG | 0.568085 | 3_1:+18267441 | Msa0351470:CDS |
| ACCACCAGCTCTTCCAGGAA+AGG | 0.568476 | 3_1:+18270156 | Msa0351470:CDS |
| CGTTCCCAATCAATAACTGA+AGG | 0.569620 | 3_1:-18271484 | None:intergenic |
| GTAAGCGCGAAAAGGTGAAT+CGG | 0.570993 | 3_1:+18271950 | Msa0351470:CDS |
| CATAATTGTCATCCGGCGAT+GGG | 0.575485 | 3_1:-18273722 | None:intergenic |
| TCATCAGCAAGTATATCCTC+GGG | 0.580662 | 3_1:-18270037 | None:intergenic |
| AAGACGACGAGGAAGAAGAA+AGG | 0.582425 | 3_1:+18272476 | Msa0351470:CDS |
| AAAACTAAAGATAAGCCACT+TGG | 0.583846 | 3_1:+18270100 | Msa0351470:CDS |
| TTTGCTGGTGGGAGGAACGA+TGG | 0.583979 | 3_1:-18272391 | None:intergenic |
| AGAGCATCAGTATGAATCAG+AGG | 0.587246 | 3_1:+18270060 | Msa0351470:CDS |
| TGTTGACTCAAGGCAAAGGA+AGG | 0.588843 | 3_1:+18271743 | Msa0351470:CDS |
| GTATTGCAGGATGAAGGAGA+GGG | 0.588913 | 3_1:+18267360 | Msa0351470:intron |
| AGAAACCAACAACCCATCGC+CGG | 0.595963 | 3_1:+18273710 | Msa0351470:CDS |
| AGGGTGAAGGAGAAGTTGAG+GGG | 0.595987 | 3_1:+18267406 | Msa0351470:CDS |
| AGAGTGGAAGAAGAGAGTGA+AGG | 0.597932 | 3_1:+18267486 | Msa0351470:CDS |
| GTAGGGCAAGAAGTTGAAGA+GGG | 0.600226 | 3_1:+18267387 | Msa0351470:CDS |
| AAGGCCTCGTTCTCGTATGA+GGG | 0.602890 | 3_1:+18272495 | Msa0351470:CDS |
| AAAATCCTCCCGGCACCAAG+TGG | 0.609142 | 3_1:+18272411 | Msa0351470:CDS |
| AACACAGCGTCACTATGAAG+AGG | 0.611539 | 3_1:+18272206 | Msa0351470:CDS |
| TATGTTGTAAAATATTGTAA+GGG | 0.611877 | 3_1:-18274227 | None:intergenic |
| CAGGGAATTCTGCAATCACA+AGG | 0.612303 | 3_1:+18271648 | Msa0351470:intron |
| AGTGGAATTTCTAACTCCAA+TGG | 0.614685 | 3_1:-18270127 | None:intergenic |
| GCAATGCTCGCTTTGTAAGG+TGG | 0.615936 | 3_1:+18271450 | Msa0351470:CDS |
| TTTATGGAATTCTAGTCACA+GGG | 0.616797 | 3_1:+18272346 | Msa0351470:intron |
| AAGATGTGCTTGATCATGCT+GGG | 0.617257 | 3_1:-18271534 | None:intergenic |
| TATGAGGGATGATGATTCTG+AGG | 0.620873 | 3_1:+18272510 | Msa0351470:CDS |
| GTGTCGTTACCAGTAAGCGT+AGG | 0.621779 | 3_1:+18267553 | Msa0351470:CDS |
| TGTCGTTACCAGTAAGCGTA+GGG | 0.622629 | 3_1:+18267554 | Msa0351470:CDS |
| TTCGGATGAGGACGAAGATG+AGG | 0.623505 | 3_1:+18272585 | Msa0351470:CDS |
| TGGAGAACAATATTGTACGT+TGG | 0.625363 | 3_1:+18270683 | Msa0351470:CDS |
| CAATTGTTGACTCAAGGCAA+AGG | 0.626176 | 3_1:+18271739 | Msa0351470:CDS |
| ACTCCAAGGGAACCCAGCTG+AGG | 0.633723 | 3_1:+18274190 | Msa0351470:three_prime_UTR |
| AGAGCTGGTGGTGGACGTAG+TGG | 0.639818 | 3_1:-18270145 | None:intergenic |
| AAATCCTCCCGGCACCAAGT+GGG | 0.639942 | 3_1:+18272412 | Msa0351470:CDS |
| GGCTGAAAGTCAGACTATCA+GGG | 0.640361 | 3_1:+18271909 | Msa0351470:intron |
| GAATTCGACGACAAGGAAGA+GGG | 0.641254 | 3_1:-18271699 | None:intergenic |
| AGGAAAGTCACAAATCCTGA+TGG | 0.643610 | 3_1:+18270706 | Msa0351470:CDS |
| AAACTAAAGATAAGCCACTT+GGG | 0.644064 | 3_1:+18270101 | Msa0351470:CDS |
| CCGATGAGAATTCGACGACA+AGG | 0.652415 | 3_1:-18271706 | None:intergenic |
| GCATCAGTATGAATCAGAGG+AGG | 0.652612 | 3_1:+18270063 | Msa0351470:CDS |
| GGAATTTCTAACTCCAATGG+TGG | 0.657203 | 3_1:-18270124 | None:intergenic |
| AATATACTCCAACTGAGAGG+AGG | 0.657581 | 3_1:+18271974 | Msa0351470:CDS |
| TGAAAAGAGCTTGAGACCCG+AGG | 0.658806 | 3_1:+18270021 | Msa0351470:CDS |
| TTACAGACATTGATCCTGAG+AGG | 0.665584 | 3_1:+18271787 | Msa0351470:CDS |
| GGAGGAACGATGGCTTACGA+GGG | 0.667853 | 3_1:-18272381 | None:intergenic |
| AAATACATCACGAATTTCCG+GGG | 0.669442 | 3_1:-18269805 | None:intergenic |
| TACAGACATTGATCCTGAGA+GGG | 0.679758 | 3_1:+18271788 | Msa0351470:CDS |
| CTTACGGGTAAGAAGTACGT+TGG | 0.682141 | 3_1:-18271932 | None:intergenic |
| TCATCCCTCATACGAGAACG+AGG | 0.687760 | 3_1:-18272499 | None:intergenic |
| GTAACCCACTTGGTGCCGGG+AGG | 0.688990 | 3_1:-18272416 | None:intergenic |
| GGAAATATACTCCAACTGAG+AGG | 0.696141 | 3_1:+18271971 | Msa0351470:CDS |
| GTTGTAGAGATATACTGCGG+AGG | 0.702989 | 3_1:+18269985 | Msa0351470:intron |
| CCTGTTGTAGAGATATACTG+CGG | 0.709987 | 3_1:+18269982 | Msa0351470:intron |
| CAGCAGCTAGAAGAAGCCTG+AGG | 0.712548 | 3_1:+18267622 | Msa0351470:CDS |
| CTTCGGAGATCAATCCGAGG+AGG | 0.714867 | 3_1:+18267114 | Msa0351470:CDS |
| ATATGAAACTGAAGACGACG+AGG | 0.714895 | 3_1:+18272465 | Msa0351470:CDS |
| TCTCTTCGGAGATCAATCCG+AGG | 0.735019 | 3_1:+18267111 | Msa0351470:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAATAATAATAATTAAA+AGG | - | chr3_1:18268740-18268759 | None:intergenic | 0.0% |
| !!! | ACTGATTTTTTATTTTTTTT+TGG | + | chr3_1:18269724-18269743 | Msa0351470:intron | 10.0% |
| !!! | ATTTTTTTTCTTATTTTAAG+AGG | + | chr3_1:18273142-18273161 | Msa0351470:intron | 10.0% |
| !! | ATGCAAAATAAATAAAAAAA+GGG | - | chr3_1:18273928-18273947 | None:intergenic | 10.0% |
| !! | AATGCAAAATAAATAAAAAA+AGG | - | chr3_1:18273929-18273948 | None:intergenic | 10.0% |
| !! | ATAATTGAGTAATCTTTATA+TGG | - | chr3_1:18268480-18268499 | None:intergenic | 15.0% |
| !! | AATCATATTAAAAACTTCAA+GGG | - | chr3_1:18269291-18269310 | None:intergenic | 15.0% |
| !! | AAATCATATTAAAAACTTCA+AGG | - | chr3_1:18269292-18269311 | None:intergenic | 15.0% |
| !! | AAAAAGTTATCTTAAATTAG+AGG | + | chr3_1:18269616-18269635 | Msa0351470:intron | 15.0% |
| !!! | TTTTTTTGGAAAAAAAATAG+TGG | + | chr3_1:18269738-18269757 | Msa0351470:intron | 15.0% |
| !!! | TTTTTTGGAAAAAAAATAGT+GGG | + | chr3_1:18269739-18269758 | Msa0351470:intron | 15.0% |
| !! | TATATGTTATTGTTAAAATG+AGG | + | chr3_1:18270206-18270225 | Msa0351470:intron | 15.0% |
| !!! | ATTTTTTGTTAGTTAAAAGT+TGG | + | chr3_1:18270274-18270293 | Msa0351470:intron | 15.0% |
| !!! | TAATTTTAGATCTTTGTTAA+TGG | + | chr3_1:18271178-18271197 | Msa0351470:intron | 15.0% |
| !!! | CAATTTTATCTTTGTTTAAT+TGG | + | chr3_1:18272726-18272745 | Msa0351470:intron | 15.0% |
| !!! | AAATATTTTGTACAGATATT+AGG | + | chr3_1:18272861-18272880 | Msa0351470:intron | 15.0% |
| !! | ATAAATCATGTATTTATTCA+AGG | - | chr3_1:18273807-18273826 | None:intergenic | 15.0% |
| !! | TATGTTGTAAAATATTGTAA+GGG | - | chr3_1:18274230-18274249 | None:intergenic | 15.0% |
| !! | ATATGTTGTAAAATATTGTA+AGG | - | chr3_1:18274231-18274250 | None:intergenic | 15.0% |
| !!! | TACAATATTTTACAACATAT+AGG | + | chr3_1:18274231-18274250 | Msa0351470:three_prime_UTR | 15.0% |
| !!! | ACAATATTTTACAACATATA+GGG | + | chr3_1:18274232-18274251 | Msa0351470:three_prime_UTR | 15.0% |
| !! | ATCGTATTGAAAATTTGAAA+TGG | + | chr3_1:18267327-18267346 | Msa0351470:intron | 20.0% |
| !!! | AATTTGAAATGGTGAATTTT+TGG | + | chr3_1:18267338-18267357 | Msa0351470:intron | 20.0% |
| !!! | AAATTTTACAATGAAATTGC+TGG | + | chr3_1:18267737-18267756 | Msa0351470:intron | 20.0% |
| !! | ATAATTAAAAGGTCTAAGAA+AGG | - | chr3_1:18268729-18268748 | None:intergenic | 20.0% |
| !!! | CTGTTTTTTTATAATAAGAG+AGG | - | chr3_1:18268801-18268820 | None:intergenic | 20.0% |
| !! | TTCTCATGGAATAATAAAAT+CGG | - | chr3_1:18269107-18269126 | None:intergenic | 20.0% |
| !! | TTTATTATTCCATGAGAAAA+AGG | + | chr3_1:18269109-18269128 | Msa0351470:intron | 20.0% |
| !!! | TTTATCACTGTAATTGATTT+CGG | + | chr3_1:18269485-18269504 | Msa0351470:intron | 20.0% |
| !! | AACAATAACATATAGAACAT+AGG | - | chr3_1:18270200-18270219 | None:intergenic | 20.0% |
| !!! | CTGAATTTTGAAATGTTTAA+AGG | + | chr3_1:18270316-18270335 | Msa0351470:intron | 20.0% |
| !! | TTGTAAAATTCTCATCATTT+AGG | - | chr3_1:18270408-18270427 | None:intergenic | 20.0% |
| !! | GAATGCATATCATATTATAA+AGG | - | chr3_1:18270514-18270533 | None:intergenic | 20.0% |
| !!! | TTTAAAGTTTCCAATATCAT+GGG | + | chr3_1:18270571-18270590 | Msa0351470:CDS | 20.0% |
| !!! | AAGAAAGATTTGGAATTAAA+TGG | - | chr3_1:18270960-18270979 | None:intergenic | 20.0% |
| !! | TAATTCCAAATCTTTCTTAA+TGG | + | chr3_1:18270962-18270981 | Msa0351470:intron | 20.0% |
| !!! | TTAAATGCCATTTCATAATT+AGG | - | chr3_1:18271226-18271245 | None:intergenic | 20.0% |
| !! | AATATGTATTACTGTTGATA+TGG | + | chr3_1:18271244-18271263 | Msa0351470:intron | 20.0% |
| !! | TTGTTTATTGTTGAATGTTA+AGG | + | chr3_1:18271357-18271376 | Msa0351470:intron | 20.0% |
| !! | TGTTTATTGTTGAATGTTAA+GGG | + | chr3_1:18271358-18271377 | Msa0351470:intron | 20.0% |
| !!! | CATTAATGAAGGTTATTTTA+TGG | + | chr3_1:18272330-18272349 | Msa0351470:intron | 20.0% |
| !!! | TGCTTTGGATTTAAAAAAAT+GGG | + | chr3_1:18272993-18273012 | Msa0351470:intron | 20.0% |
| !! | GTTATCAATTAACATTGTTA+TGG | + | chr3_1:18273576-18273595 | Msa0351470:intron | 20.0% |
| !! | CAAAAGAGTAAGAATTTAAA+AGG | + | chr3_1:18273637-18273656 | Msa0351470:CDS | 20.0% |
| !! | CAAAATAAATAAAAAAAGGG+AGG | - | chr3_1:18273925-18273944 | None:intergenic | 20.0% |
| !!! | ATTTTCGTTATTAGTTTTCA+AGG | + | chr3_1:18273946-18273965 | Msa0351470:intron | 20.0% |
| !! | CTTTGATACTTTACAATATA+TGG | + | chr3_1:18274261-18274280 | Msa0351470:three_prime_UTR | 20.0% |
| !!! | TACAATATATGGATTAAAAG+AGG | + | chr3_1:18274272-18274291 | Msa0351470:three_prime_UTR | 20.0% |
| !!! | TTTTTTTTGTCTTTGAGAAG+AGG | + | chr3_1:18266952-18266971 | Msa0351470:five_prime_UTR | 25.0% |
| !! | TATTCCTTTGTTTATGCATT+TGG | + | chr3_1:18267301-18267320 | Msa0351470:intron | 25.0% |
| ! | AAAAAGAAAAAAACTACCTC+AGG | - | chr3_1:18267641-18267660 | None:intergenic | 25.0% |
| ! | TCATTAATTTACCACATTGT+TGG | + | chr3_1:18267679-18267698 | Msa0351470:intron | 25.0% |
| ! | CATTAATTTACCACATTGTT+GGG | + | chr3_1:18267680-18267699 | Msa0351470:intron | 25.0% |
| !!! | GCTGTTTTGATTAAGTTTTT+TGG | + | chr3_1:18267708-18267727 | Msa0351470:intron | 25.0% |
| !!! | TTTATTTCTAAGAAACCTAG+TGG | - | chr3_1:18268034-18268053 | None:intergenic | 25.0% |
| !! | TTCAACTCAATTCTTTTAGA+TGG | + | chr3_1:18268121-18268140 | Msa0351470:intron | 25.0% |
| !! | TCAACTCAATTCTTTTAGAT+GGG | + | chr3_1:18268122-18268141 | Msa0351470:intron | 25.0% |
| ! | TTCTTGAGGAATAATAGAAT+CGG | + | chr3_1:18268268-18268287 | Msa0351470:intron | 25.0% |
| ! | ATAAAAAAACAGCAGTGAAT+TGG | + | chr3_1:18268809-18268828 | Msa0351470:intron | 25.0% |
| !! | GACATTTTCTATGTTCTATT+TGG | - | chr3_1:18269643-18269662 | None:intergenic | 25.0% |
| ! | TTGAGAAATTTCTGATGTTA+TGG | + | chr3_1:18270369-18270388 | Msa0351470:intron | 25.0% |
| !! | TGATGAGAATTTTACAAGTT+TGG | + | chr3_1:18270411-18270430 | Msa0351470:intron | 25.0% |
| !!! | GTTGAATAGATTTTGACATA+TGG | + | chr3_1:18270453-18270472 | Msa0351470:intron | 25.0% |
| !! | GTTTAAAGTTTCCAATATCA+TGG | + | chr3_1:18270570-18270589 | Msa0351470:CDS | 25.0% |
| ! | AAATGGTTTAAATGTAGACA+TGG | - | chr3_1:18270943-18270962 | None:intergenic | 25.0% |
| ! | CTTTAAATATGATTCATGAG+AGG | - | chr3_1:18271148-18271167 | None:intergenic | 25.0% |
| ! | GAAATAGCCTAATTATGAAA+TGG | + | chr3_1:18271216-18271235 | Msa0351470:intron | 25.0% |
| ! | AAAAAATCTTGTTCATGATC+AGG | + | chr3_1:18271421-18271440 | Msa0351470:intron | 25.0% |
| ! | TTTGGATGAGGTATAAATTT+AGG | + | chr3_1:18272029-18272048 | Msa0351470:intron | 25.0% |
| ! | TTGGATGAGGTATAAATTTA+GGG | + | chr3_1:18272030-18272049 | Msa0351470:intron | 25.0% |
| !!! | AAGGGAGCATTAATAAATAA+TGG | - | chr3_1:18272147-18272166 | None:intergenic | 25.0% |
| !!! | GGTATTATTATTTTGTCTCT+AGG | + | chr3_1:18272278-18272297 | Msa0351470:intron | 25.0% |
| !! | TTTTGCGTTAACATTAATGA+AGG | + | chr3_1:18272319-18272338 | Msa0351470:intron | 25.0% |
| !!! | ATTGGTTTTCTTTTAATCTC+TGG | + | chr3_1:18272744-18272763 | Msa0351470:intron | 25.0% |
| !! | CTGCTTTGGATTTAAAAAAA+TGG | + | chr3_1:18272992-18273011 | Msa0351470:intron | 25.0% |
| ! | AACAGTCAATAATAGGTATT+GGG | - | chr3_1:18273242-18273261 | None:intergenic | 25.0% |
| ! | AAATGTTAAGAGCAATATTC+AGG | - | chr3_1:18273383-18273402 | None:intergenic | 25.0% |
| !! | ACATTTCCATTTTGTTCATT+TGG | + | chr3_1:18273397-18273416 | Msa0351470:intron | 25.0% |
| !! | CATTTCCATTTTGTTCATTT+GGG | + | chr3_1:18273398-18273417 | Msa0351470:intron | 25.0% |
| ! | AAAAAAACAAGGATAGTGTT+AGG | - | chr3_1:18273480-18273499 | None:intergenic | 25.0% |
| ! | AATACCAGAACAAAAAAACA+AGG | - | chr3_1:18273491-18273510 | None:intergenic | 25.0% |
| ! | TTCTTCTTTACATATCTGTT+AGG | + | chr3_1:18273518-18273537 | Msa0351470:intron | 25.0% |
| ! | CATAATGAAAATCTGACTTA+CGG | - | chr3_1:18273773-18273792 | None:intergenic | 25.0% |
| ! | CATGTATTTATTCAAGGTTA+AGG | - | chr3_1:18273801-18273820 | None:intergenic | 25.0% |
| !!! | TGTTTTTGCTATCAAAAGAA+GGG | + | chr3_1:18273862-18273881 | Msa0351470:intron | 25.0% |
| ! | ATAAATAAAAAAAGGGAGGA+AGG | - | chr3_1:18273921-18273940 | None:intergenic | 25.0% |
| ! | ATTGAAAATCCTACATATGA+TGG | - | chr3_1:18273989-18274008 | None:intergenic | 25.0% |
| !! | AAATTTACTGAGCTTTTCTA+GGG | + | chr3_1:18274013-18274032 | Msa0351470:three_prime_UTR | 25.0% |
| ! | AATCTTACAGAATTGAGTTG+AGG | - | chr3_1:18267175-18267194 | None:intergenic | 30.0% |
| TCTTCCAAATGCATAAACAA+AGG | - | chr3_1:18267308-18267327 | None:intergenic | 30.0% | |
| !!! | TTTGATTAAGTTTTTTGGCG+CGG | + | chr3_1:18267713-18267732 | Msa0351470:intron | 30.0% |
| TCTACACAACTAATAAAACC+CGG | - | chr3_1:18267795-18267814 | None:intergenic | 30.0% | |
| TCATGTAAGTACAACTTAGT+TGG | + | chr3_1:18267924-18267943 | Msa0351470:intron | 30.0% | |
| ATCTTAAGCTTGGAGAAATA+AGG | - | chr3_1:18267999-18268018 | None:intergenic | 30.0% | |
| ! | AAATTTGCACGTTTTTCTTG+AGG | + | chr3_1:18268254-18268273 | Msa0351470:intron | 30.0% |
| !! | ATAATAGAATCGGCTACTTT+TGG | + | chr3_1:18268278-18268297 | Msa0351470:intron | 30.0% |
| AAAGGTCTAAGAAAGGAATT+GGG | - | chr3_1:18268722-18268741 | None:intergenic | 30.0% | |
| AAAAGGTCTAAGAAAGGAAT+TGG | - | chr3_1:18268723-18268742 | None:intergenic | 30.0% | |
| ! | TGCAAGTTAATTTTTCCTGA+TGG | - | chr3_1:18268920-18268939 | None:intergenic | 30.0% |
| ATAATAAAATCGGCTACTTC+TGG | - | chr3_1:18269097-18269116 | None:intergenic | 30.0% | |
| ! | AAATTTGCACCTTTTTCTCA+TGG | - | chr3_1:18269121-18269140 | None:intergenic | 30.0% |
| CACATCCTATAAATCATGAT+CGG | - | chr3_1:18269543-18269562 | None:intergenic | 30.0% | |
| AGTTTCTGATTCTCAATGTT+GGG | - | chr3_1:18269707-18269726 | None:intergenic | 30.0% | |
| CAAAGATCAGAATCATGATT+TGG | + | chr3_1:18269776-18269795 | Msa0351470:CDS | 30.0% | |
| AAAACTAAAGATAAGCCACT+TGG | + | chr3_1:18270100-18270119 | Msa0351470:CDS | 30.0% | |
| AAACTAAAGATAAGCCACTT+GGG | + | chr3_1:18270101-18270120 | Msa0351470:CDS | 30.0% | |
| GAACACCAACATATCTTTAA+GGG | + | chr3_1:18270338-18270357 | Msa0351470:intron | 30.0% | |
| AACTTCCCTTAAAGATATGT+TGG | - | chr3_1:18270346-18270365 | None:intergenic | 30.0% | |
| GAAATTTCTGATGTTATGGT+TGG | + | chr3_1:18270373-18270392 | Msa0351470:intron | 30.0% | |
| !! | TCATATGTTCTAGGATCAAA+TGG | - | chr3_1:18270610-18270629 | None:intergenic | 30.0% |
| TCTTCTTCTTCATATGTTCT+AGG | - | chr3_1:18270619-18270638 | None:intergenic | 30.0% | |
| ACCTTTGTAACTGATGAATT+TGG | + | chr3_1:18270640-18270659 | Msa0351470:CDS | 30.0% | |
| TCCAAATTCATCAGTTACAA+AGG | - | chr3_1:18270644-18270663 | None:intergenic | 30.0% | |
| ! | TGTTACAACTAAGAGTGTAA+TGG | - | chr3_1:18270834-18270853 | None:intergenic | 30.0% |
| ! | ATTCTTCTCCCTTTTACTAA+TGG | + | chr3_1:18271007-18271026 | Msa0351470:intron | 30.0% |
| AGACCAAACCATTAGTAAAA+GGG | - | chr3_1:18271018-18271037 | None:intergenic | 30.0% | |
| TAGACCAAACCATTAGTAAA+AGG | - | chr3_1:18271019-18271038 | None:intergenic | 30.0% | |
| ! | ACTTAAACCTTTTTCCTGTT+AGG | + | chr3_1:18271086-18271105 | Msa0351470:intron | 30.0% |
| !!! | CTGTTTTTGAGTAAGAGTAT+TGG | + | chr3_1:18271315-18271334 | Msa0351470:intron | 30.0% |
| GGTGAATTTCATTATTCTCA+TGG | + | chr3_1:18271574-18271593 | Msa0351470:intron | 30.0% | |
| CCTGAAAATGATAGAGAAAT+TGG | - | chr3_1:18271891-18271910 | None:intergenic | 30.0% | |
| ! | CCAATTTCTCTATCATTTTC+AGG | + | chr3_1:18271888-18271907 | Msa0351470:intron | 30.0% |
| TAAAAGACAATAGTGTCTCT+AGG | - | chr3_1:18272063-18272082 | None:intergenic | 30.0% | |
| !! | CATTTGCTGCAATATTTTCT+AGG | + | chr3_1:18272092-18272111 | Msa0351470:intron | 30.0% |
| ! | TTTTATGGAATTCTAGTCAC+AGG | + | chr3_1:18272345-18272364 | Msa0351470:intron | 30.0% |
| TTTATGGAATTCTAGTCACA+GGG | + | chr3_1:18272346-18272365 | Msa0351470:intron | 30.0% | |
| AGAACAAGAAAATGATGCTT+CGG | + | chr3_1:18272567-18272586 | Msa0351470:CDS | 30.0% | |
| TGTGAACCAATAAATGGTAA+AGG | - | chr3_1:18272701-18272720 | None:intergenic | 30.0% | |
| GATTGTTGTGAACCAATAAA+TGG | - | chr3_1:18272707-18272726 | None:intergenic | 30.0% | |
| ! | ATGCTTGCAATATTTTGCAT+AGG | + | chr3_1:18272801-18272820 | Msa0351470:intron | 30.0% |
| GCAATCAAATGTTAATGGTT+TGG | - | chr3_1:18272973-18272992 | None:intergenic | 30.0% | |
| AAGCAGCAATCAAATGTTAA+TGG | - | chr3_1:18272978-18272997 | None:intergenic | 30.0% | |
| ! | TTAACATTTGATTGCTGCTT+TGG | + | chr3_1:18272978-18272997 | Msa0351470:intron | 30.0% |
| AAAAAAATGGGCAATTAACC+AGG | + | chr3_1:18273005-18273024 | Msa0351470:intron | 30.0% | |
| AAACCAACCCAATAATGATT+AGG | - | chr3_1:18273036-18273055 | None:intergenic | 30.0% | |
| CAACAGTCAATAATAGGTAT+TGG | - | chr3_1:18273243-18273262 | None:intergenic | 30.0% | |
| TCAACACAACAGTCAATAAT+AGG | - | chr3_1:18273249-18273268 | None:intergenic | 30.0% | |
| !! | CTTTGTCCTTTAAAGTGAAT+TGG | + | chr3_1:18273292-18273311 | Msa0351470:intron | 30.0% |
| AGTCTACCAATTCACTTTAA+AGG | - | chr3_1:18273301-18273320 | None:intergenic | 30.0% | |
| CAAAACCCAAATGAACAAAA+TGG | - | chr3_1:18273406-18273425 | None:intergenic | 30.0% | |
| ACAAAGCTTAATAAGGAACT+CGG | - | chr3_1:18273432-18273451 | None:intergenic | 30.0% | |
| CACTGAAACAAAGCTTAATA+AGG | - | chr3_1:18273439-18273458 | None:intergenic | 30.0% | |
| TTTCAGTGATACTTGTCTAT+TGG | + | chr3_1:18273451-18273470 | Msa0351470:intron | 30.0% | |
| !!! | CTATCCTTGTTTTTTTGTTC+TGG | + | chr3_1:18273484-18273503 | Msa0351470:intron | 30.0% |
| ACTATTTCATGTTTACTTGC+AGG | + | chr3_1:18273606-18273625 | Msa0351470:intron | 30.0% | |
| CTATTTCATGTTTACTTGCA+GGG | + | chr3_1:18273607-18273626 | Msa0351470:intron | 30.0% | |
| GAGTAAGAATTTAAAAGGCA+AGG | + | chr3_1:18273642-18273661 | Msa0351470:CDS | 30.0% | |
| !! | CTTTTGATAGCAAAAACACA+TGG | - | chr3_1:18273860-18273879 | None:intergenic | 30.0% |
| !! | GTGTTTTTGCTATCAAAAGA+AGG | + | chr3_1:18273861-18273880 | Msa0351470:intron | 30.0% |
| !! | GTTATTTTGCCATCATATGT+AGG | + | chr3_1:18273977-18273996 | Msa0351470:intron | 30.0% |
| ! | GAAATTTACTGAGCTTTTCT+AGG | + | chr3_1:18274012-18274031 | Msa0351470:three_prime_UTR | 30.0% |
| TGCTTCTTCTTCTATAATTC+AGG | + | chr3_1:18274062-18274081 | Msa0351470:three_prime_UTR | 30.0% | |
| ATAATTCAGGATCTTGCAAT+TGG | + | chr3_1:18274075-18274094 | Msa0351470:three_prime_UTR | 30.0% | |
| ! | TGCTCTTGTATTTCTAATGA+CGG | + | chr3_1:18274114-18274133 | Msa0351470:three_prime_UTR | 30.0% |
| !!! | TGTTCTAAAGTTTTACTCCA+AGG | + | chr3_1:18274176-18274195 | Msa0351470:three_prime_UTR | 30.0% |
| !!! | GTTCTAAAGTTTTACTCCAA+GGG | + | chr3_1:18274177-18274196 | Msa0351470:three_prime_UTR | 30.0% |
| !! | CACAAGTTCTAAGCTCAAAA+CGG | + | chr3_1:18266993-18267012 | Msa0351470:five_prime_UTR | 35.0% |
| TTGAGGATTGGATTCATGTT+CGG | - | chr3_1:18267158-18267177 | None:intergenic | 35.0% | |
| !! | TACAGAATTGAGTTGAGGAT+TGG | - | chr3_1:18267170-18267189 | None:intergenic | 35.0% |
| !!! | TGGTGAATTTTTGGTATTGC+AGG | + | chr3_1:18267347-18267366 | Msa0351470:intron | 35.0% |
| !! | TTTTTGGTATTGCAGGATGA+AGG | + | chr3_1:18267354-18267373 | Msa0351470:intron | 35.0% |
| ! | ACGCTGATTGTAATCATCTT+TGG | - | chr3_1:18267535-18267554 | None:intergenic | 35.0% |
| AATTTACCACATTGTTGGGT+TGG | + | chr3_1:18267684-18267703 | Msa0351470:intron | 35.0% | |
| TATGTGGTTGCTAATTGAAC+CGG | + | chr3_1:18267773-18267792 | Msa0351470:intron | 35.0% | |
| TTGGAGAAATAAGGAATCCT+AGG | - | chr3_1:18267990-18268009 | None:intergenic | 35.0% | |
| CTTAGAAATAAAGAGTCCTC+TGG | + | chr3_1:18268042-18268061 | Msa0351470:intron | 35.0% | |
| ! | CAAGAGCATAAGAATCAAGA+AGG | - | chr3_1:18268074-18268093 | None:intergenic | 35.0% |
| ! | ACTCAATTCTTTTAGATGGG+TGG | + | chr3_1:18268125-18268144 | Msa0351470:intron | 35.0% |
| ! | ATTCTTTTAGATGGGTGGAT+TGG | + | chr3_1:18268130-18268149 | Msa0351470:intron | 35.0% |
| AATCTCCTATCTGCTATCTT+GGG | + | chr3_1:18268370-18268389 | Msa0351470:intron | 35.0% | |
| ! | GTTGGAAATGAAACTGGTTT+GGG | - | chr3_1:18268396-18268415 | None:intergenic | 35.0% |
| ATACACAAGATTGACGACAA+AGG | - | chr3_1:18268612-18268631 | None:intergenic | 35.0% | |
| TTGTCGTCAATCTTGTGTAT+CGG | + | chr3_1:18268612-18268631 | Msa0351470:intron | 35.0% | |
| AAAACAGCAGTGAATTGGTT+TGG | + | chr3_1:18268814-18268833 | Msa0351470:intron | 35.0% | |
| ! | AAACAGCAGTGAATTGGTTT+GGG | + | chr3_1:18268815-18268834 | Msa0351470:intron | 35.0% |
| ! | CCTCTTTTTCTCATTCTCTT+GGG | - | chr3_1:18268967-18268986 | None:intergenic | 35.0% |
| ! | TCCTCTTTTTCTCATTCTCT+TGG | - | chr3_1:18268968-18268987 | None:intergenic | 35.0% |
| !!! | TCCTCATTTTTTTTCCCTCT+TGG | + | chr3_1:18269399-18269418 | Msa0351470:intron | 35.0% |
| !!! | CCTCATTTTTTTTCCCTCTT+GGG | + | chr3_1:18269400-18269419 | Msa0351470:intron | 35.0% |
| !!! | CTCATTTTTTTTCCCTCTTG+GGG | + | chr3_1:18269401-18269420 | Msa0351470:intron | 35.0% |
| GATAATATGAATCCCCAAGA+GGG | - | chr3_1:18269416-18269435 | None:intergenic | 35.0% | |
| AACTTAGCTCAGCAGAAAAT+AGG | - | chr3_1:18269441-18269460 | None:intergenic | 35.0% | |
| TACGTCCGATCATGATTTAT+AGG | + | chr3_1:18269535-18269554 | Msa0351470:intron | 35.0% | |
| AGTATAGAACAGAATAGCAC+AGG | - | chr3_1:18269569-18269588 | None:intergenic | 35.0% | |
| AATTGTGCAAGCTGAATCTT+GGG | - | chr3_1:18269672-18269691 | None:intergenic | 35.0% | |
| AAATTGTGCAAGCTGAATCT+TGG | - | chr3_1:18269673-18269692 | None:intergenic | 35.0% | |
| CAGTTTCTGATTCTCAATGT+TGG | - | chr3_1:18269708-18269727 | None:intergenic | 35.0% | |
| TTCTGATCTTTGTCATCTCT+GGG | - | chr3_1:18269768-18269787 | None:intergenic | 35.0% | |
| ATTCTGATCTTTGTCATCTC+TGG | - | chr3_1:18269769-18269788 | None:intergenic | 35.0% | |
| AAATACATCACGAATTTCCG+GGG | - | chr3_1:18269808-18269827 | None:intergenic | 35.0% | |
| CAAATACATCACGAATTTCC+GGG | - | chr3_1:18269809-18269828 | None:intergenic | 35.0% | |
| CCAAATACATCACGAATTTC+CGG | - | chr3_1:18269810-18269829 | None:intergenic | 35.0% | |
| !!! | TGGTGATTTTGATGATGAAG+AGG | + | chr3_1:18269827-18269846 | Msa0351470:CDS | 35.0% |
| !!! | TGATTTTGATGATGAAGAGG+AGG | + | chr3_1:18269830-18269849 | Msa0351470:CDS | 35.0% |
| TTCATCAGCAAGTATATCCT+CGG | - | chr3_1:18270041-18270060 | None:intergenic | 35.0% | |
| AGTGGAATTTCTAACTCCAA+TGG | - | chr3_1:18270130-18270149 | None:intergenic | 35.0% | |
| GGAACACCAACATATCTTTA+AGG | + | chr3_1:18270337-18270356 | Msa0351470:intron | 35.0% | |
| GACATATGGTATCACTCTAT+TGG | + | chr3_1:18270467-18270486 | Msa0351470:intron | 35.0% | |
| ! | AAGGTGTTCTATGTGTAGTT+AGG | - | chr3_1:18270495-18270514 | None:intergenic | 35.0% |
| !!! | GTTCTAGGATCAAATGGTTT+TGG | - | chr3_1:18270604-18270623 | None:intergenic | 35.0% |
| TGGAGAACAATATTGTACGT+TGG | + | chr3_1:18270683-18270702 | Msa0351470:CDS | 35.0% | |
| AGAACAATATTGTACGTTGG+AGG | + | chr3_1:18270686-18270705 | Msa0351470:CDS | 35.0% | |
| ! | CTTTCCTTCTTTTACATCCA+TGG | + | chr3_1:18270798-18270817 | Msa0351470:intron | 35.0% |
| CTTACCATGGATGTAAAAGA+AGG | - | chr3_1:18270805-18270824 | None:intergenic | 35.0% | |
| ! | TCTTTTACATCCATGGTAAG+TGG | + | chr3_1:18270805-18270824 | Msa0351470:intron | 35.0% |
| !! | AAAGGCTTTATGGGATTTTG+TGG | - | chr3_1:18270862-18270881 | None:intergenic | 35.0% |
| CCAGACCATTAAGAAAGATT+TGG | - | chr3_1:18270970-18270989 | None:intergenic | 35.0% | |
| CCAAATCTTTCTTAATGGTC+TGG | + | chr3_1:18270967-18270986 | Msa0351470:intron | 35.0% | |
| ! | TCTCCCTTTTACTAATGGTT+TGG | + | chr3_1:18271012-18271031 | Msa0351470:intron | 35.0% |
| ATTTATTGACCAAGCCTAAC+AGG | - | chr3_1:18271103-18271122 | None:intergenic | 35.0% | |
| GCTTGGTCAATAAATGAATC+AGG | + | chr3_1:18271108-18271127 | Msa0351470:intron | 35.0% | |
| ! | GTATTGGCAAACTGAGTTAT+TGG | + | chr3_1:18271331-18271350 | Msa0351470:intron | 35.0% |
| ! | GAAGCCTTCAGTTATTGATT+GGG | + | chr3_1:18271480-18271499 | Msa0351470:CDS | 35.0% |
| ! | TCTTTTCCTTAGACATGGAA+AGG | + | chr3_1:18271553-18271572 | Msa0351470:CDS | 35.0% |
| AATTCACCTTTCCATGTCTA+AGG | - | chr3_1:18271562-18271581 | None:intergenic | 35.0% | |
| ! | GATTTACTGTTTCTCCTCAA+TGG | + | chr3_1:18271607-18271626 | Msa0351470:intron | 35.0% |
| ACTATGTGCACTTGTTTACA+GGG | + | chr3_1:18271630-18271649 | Msa0351470:intron | 35.0% | |
| AATCACAAGGACAACTATCA+AGG | + | chr3_1:18271661-18271680 | Msa0351470:CDS | 35.0% | |
| !! | TAACTGCAATTGTTGACTCA+AGG | + | chr3_1:18271733-18271752 | Msa0351470:CDS | 35.0% |
| GGAGAAAGAAGAAAAGGAAA+AGG | + | chr3_1:18271809-18271828 | Msa0351470:CDS | 35.0% | |
| TATTAATGCTCCCTTTCTTC+AGG | + | chr3_1:18272152-18272171 | Msa0351470:intron | 35.0% | |
| ! | ACGGATTATGAATGCTAAGA+AGG | + | chr3_1:18272257-18272276 | Msa0351470:CDS | 35.0% |
| TGCACTAACAGAAAGTAAAC+TGG | - | chr3_1:18272678-18272697 | None:intergenic | 35.0% | |
| AGTGCACCTTTACCATTTAT+TGG | + | chr3_1:18272692-18272711 | Msa0351470:intron | 35.0% | |
| CTTCTTGTCAGTTGTTAAAG+TGG | + | chr3_1:18272833-18272852 | Msa0351470:intron | 35.0% | |
| TTATGTGCCTTGATTCATGT+TGG | + | chr3_1:18272888-18272907 | Msa0351470:intron | 35.0% | |
| TATGTGCCTTGATTCATGTT+GGG | + | chr3_1:18272889-18272908 | Msa0351470:intron | 35.0% | |
| AAAGTTCCCAACATGAATCA+AGG | - | chr3_1:18272898-18272917 | None:intergenic | 35.0% | |
| TTGATTCATGTTGGGAACTT+TGG | + | chr3_1:18272897-18272916 | Msa0351470:intron | 35.0% | |
| !! | AATAATGATTAGGTTGGTCC+TGG | - | chr3_1:18273026-18273045 | None:intergenic | 35.0% |
| AGGACCAACCTAATCATTAT+TGG | + | chr3_1:18273025-18273044 | Msa0351470:intron | 35.0% | |
| GGACCAACCTAATCATTATT+GGG | + | chr3_1:18273026-18273045 | Msa0351470:intron | 35.0% | |
| CAACCCAATAATGATTAGGT+TGG | - | chr3_1:18273032-18273051 | None:intergenic | 35.0% | |
| CAACCTAATCATTATTGGGT+TGG | + | chr3_1:18273030-18273049 | Msa0351470:intron | 35.0% | |
| !! | ATTATTGGGTTGGTTTGAGT+TGG | + | chr3_1:18273040-18273059 | Msa0351470:intron | 35.0% |
| !! | TTATTGGGTTGGTTTGAGTT+GGG | + | chr3_1:18273041-18273060 | Msa0351470:intron | 35.0% |
| GTAGCTATATCTCATAGGAT+CGG | - | chr3_1:18273107-18273126 | None:intergenic | 35.0% | |
| CATCAGTAGCTATATCTCAT+AGG | - | chr3_1:18273112-18273131 | None:intergenic | 35.0% | |
| CTATGAGATATAGCTACTGA+TGG | + | chr3_1:18273110-18273129 | Msa0351470:intron | 35.0% | |
| TGGGTAATGCTAACAAATCA+TGG | - | chr3_1:18273223-18273242 | None:intergenic | 35.0% | |
| ! | AGAATCAAACCCCTTCTTTT+TGG | - | chr3_1:18273668-18273687 | None:intergenic | 35.0% |
| TGTCAGACATAATTGTCATC+CGG | - | chr3_1:18273732-18273751 | None:intergenic | 35.0% | |
| ACACATGGTTTATCATCTCA+TGG | - | chr3_1:18273845-18273864 | None:intergenic | 35.0% | |
| TAAAAAAAGGGAGGAAGGAA+GGG | - | chr3_1:18273916-18273935 | None:intergenic | 35.0% | |
| ATAAAAAAAGGGAGGAAGGA+AGG | - | chr3_1:18273917-18273936 | None:intergenic | 35.0% | |
| AGGATCTTGCAATTGGAATT+TGG | + | chr3_1:18274082-18274101 | Msa0351470:three_prime_UTR | 35.0% | |
| TTTCTACGCTCTCTCTGTTT+GGG | - | chr3_1:18267052-18267071 | None:intergenic | 40.0% | |
| ! | TTTTCTACGCTCTCTCTGTT+TGG | - | chr3_1:18267053-18267072 | None:intergenic | 40.0% |
| ! | ACAGAGAGAGCGTAGAAAAA+TGG | + | chr3_1:18267054-18267073 | Msa0351470:exon | 40.0% |
| ! | CAGAGAGAGCGTAGAAAAAT+GGG | + | chr3_1:18267055-18267074 | Msa0351470:exon | 40.0% |
| ! | AGAGAGAGCGTAGAAAAATG+GGG | + | chr3_1:18267056-18267075 | Msa0351470:exon | 40.0% |
| CAGATGATGCAGAATCTCTT+CGG | + | chr3_1:18267097-18267116 | Msa0351470:CDS | 40.0% | |
| AAGTTCATCTTCTTCCTCCT+CGG | - | chr3_1:18267131-18267150 | None:intergenic | 40.0% | |
| ! | TGGATCTGATGATGATGAAC+AGG | + | chr3_1:18267590-18267609 | Msa0351470:CDS | 40.0% |
| CAATGAAATTGCTGGAGAAG+CGG | + | chr3_1:18267745-18267764 | Msa0351470:intron | 40.0% | |
| ATGTGGTTGCTAATTGAACC+GGG | + | chr3_1:18267774-18267793 | Msa0351470:intron | 40.0% | |
| TGCAAAGACGATGATATGCA+TGG | + | chr3_1:18267951-18267970 | Msa0351470:intron | 40.0% | |
| GCAAAGACGATGATATGCAT+GGG | + | chr3_1:18267952-18267971 | Msa0351470:intron | 40.0% | |
| AGACTCACACATCTTAAGCT+TGG | - | chr3_1:18268009-18268028 | None:intergenic | 40.0% | |
| ! | ATAAAGCCAGTCCTTGTTGT+GGG | + | chr3_1:18268162-18268181 | Msa0351470:intron | 40.0% |
| AAAACGTGCAAATTTCACCC+TGG | - | chr3_1:18268249-18268268 | None:intergenic | 40.0% | |
| ATAGGAGATTCTAGGTTGCA+AGG | - | chr3_1:18268360-18268379 | None:intergenic | 40.0% | |
| GATAGCAGATAGGAGATTCT+AGG | - | chr3_1:18268368-18268387 | None:intergenic | 40.0% | |
| GAATCTCCTATCTGCTATCT+TGG | + | chr3_1:18268369-18268388 | Msa0351470:intron | 40.0% | |
| GGTTGGAAATGAAACTGGTT+TGG | - | chr3_1:18268397-18268416 | None:intergenic | 40.0% | |
| GATGTGGTTGGAAATGAAAC+TGG | - | chr3_1:18268402-18268421 | None:intergenic | 40.0% | |
| ATACACGAGATTGACGACAA+AGG | + | chr3_1:18268423-18268442 | Msa0351470:intron | 40.0% | |
| TTTCAAATCCGACAAGCTTC+AGG | + | chr3_1:18268526-18268545 | Msa0351470:intron | 40.0% | |
| TCTCTTAACCTGAAGCTTGT+CGG | - | chr3_1:18268537-18268556 | None:intergenic | 40.0% | |
| GTGTAGCTGGAAATGAAACT+GGG | + | chr3_1:18268634-18268653 | Msa0351470:intron | 40.0% | |
| ATTTCTTGATCTGAACACGC+TGG | - | chr3_1:18268660-18268679 | None:intergenic | 40.0% | |
| AAGAGGAATATTGGGCACTT+GGG | - | chr3_1:18268841-18268860 | None:intergenic | 40.0% | |
| GTTCGCTGAAGAGGAATATT+GGG | - | chr3_1:18268849-18268868 | None:intergenic | 40.0% | |
| AGTTCGCTGAAGAGGAATAT+TGG | - | chr3_1:18268850-18268869 | None:intergenic | 40.0% | |
| GATTAAAGAGTTCGCTGAAG+AGG | - | chr3_1:18268858-18268877 | None:intergenic | 40.0% | |
| AGCATAGGGAATTGTAAACG+GGG | - | chr3_1:18268886-18268905 | None:intergenic | 40.0% | |
| GAGCATAGGGAATTGTAAAC+GGG | - | chr3_1:18268887-18268906 | None:intergenic | 40.0% | |
| GGAGCATAGGGAATTGTAAA+CGG | - | chr3_1:18268888-18268907 | None:intergenic | 40.0% | |
| !! | TTTTCCTGATGGTGAGAAGA+TGG | - | chr3_1:18268909-18268928 | None:intergenic | 40.0% |
| CCCAAGAGAATGAGAAAAAG+AGG | + | chr3_1:18268964-18268983 | Msa0351470:intron | 40.0% | |
| ! | AAAAGGTGCAAATTTCACCC+TGG | + | chr3_1:18269126-18269145 | Msa0351470:intron | 40.0% |
| ATAAAGTGAGTCCTTGTTGC+GGG | - | chr3_1:18269213-18269232 | None:intergenic | 40.0% | |
| CATAAAGTGAGTCCTTGTTG+CGG | - | chr3_1:18269214-18269233 | None:intergenic | 40.0% | |
| CCCAAGAGGGAAAAAAAATG+AGG | - | chr3_1:18269403-18269422 | None:intergenic | 40.0% | |
| GGATAATATGAATCCCCAAG+AGG | - | chr3_1:18269417-18269436 | None:intergenic | 40.0% | |
| TTAGCTCAGCAGAAAATAGG+TGG | - | chr3_1:18269438-18269457 | None:intergenic | 40.0% | |
| CCGGAAATTCGTGATGTATT+TGG | + | chr3_1:18269807-18269826 | Msa0351470:CDS | 40.0% | |
| ! | TGATGATGAAGAGGAGGATA+TGG | + | chr3_1:18269836-18269855 | Msa0351470:CDS | 40.0% |
| GATGATGAAGAGGAGGATAT+GGG | + | chr3_1:18269837-18269856 | Msa0351470:CDS | 40.0% | |
| ATGATGAAGAGGAGGATATG+GGG | + | chr3_1:18269838-18269857 | Msa0351470:CDS | 40.0% | |
| CCTGTTGTAGAGATATACTG+CGG | + | chr3_1:18269982-18270001 | Msa0351470:intron | 40.0% | |
| TCATCAGCAAGTATATCCTC+GGG | - | chr3_1:18270040-18270059 | None:intergenic | 40.0% | |
| ! | AGAGCATCAGTATGAATCAG+AGG | + | chr3_1:18270060-18270079 | Msa0351470:CDS | 40.0% |
| GGAATTTCTAACTCCAATGG+TGG | - | chr3_1:18270127-18270146 | None:intergenic | 40.0% | |
| CACAAATGAGAGGCTGTTAT+AGG | - | chr3_1:18270536-18270555 | None:intergenic | 40.0% | |
| ATAACAGCCTCTCATTTGTG+TGG | + | chr3_1:18270536-18270555 | Msa0351470:intron | 40.0% | |
| TGGATCAACTCCCATGATAT+TGG | - | chr3_1:18270584-18270603 | None:intergenic | 40.0% | |
| AGGAAAGTCACAAATCCTGA+TGG | + | chr3_1:18270706-18270725 | Msa0351470:CDS | 40.0% | |
| ! | CTAGTGGTCAAAGGCTTTAT+GGG | - | chr3_1:18270871-18270890 | None:intergenic | 40.0% |
| ! | AACCTTTTTCCTGTTAGGCT+TGG | + | chr3_1:18271091-18271110 | Msa0351470:intron | 40.0% |
| AAAGCAATGCTCGCTTTGTA+AGG | + | chr3_1:18271447-18271466 | Msa0351470:CDS | 40.0% | |
| GGAAGCCTTCAGTTATTGAT+TGG | + | chr3_1:18271479-18271498 | Msa0351470:CDS | 40.0% | |
| CGTTCCCAATCAATAACTGA+AGG | - | chr3_1:18271487-18271506 | None:intergenic | 40.0% | |
| AGTTCTTGACATATCTGAGC+AGG | + | chr3_1:18271508-18271527 | Msa0351470:CDS | 40.0% | |
| AAGATGTGCTTGATCATGCT+GGG | - | chr3_1:18271537-18271556 | None:intergenic | 40.0% | |
| AAAGATGTGCTTGATCATGC+TGG | - | chr3_1:18271538-18271557 | None:intergenic | 40.0% | |
| ! | GCACATCTTTTCCTTAGACA+TGG | + | chr3_1:18271548-18271567 | Msa0351470:CDS | 40.0% |
| GACTATGTGCACTTGTTTAC+AGG | + | chr3_1:18271629-18271648 | Msa0351470:intron | 40.0% | |
| !! | CAATTGTTGACTCAAGGCAA+AGG | + | chr3_1:18271739-18271758 | Msa0351470:CDS | 40.0% |
| TTACAGACATTGATCCTGAG+AGG | + | chr3_1:18271787-18271806 | Msa0351470:CDS | 40.0% | |
| TACAGACATTGATCCTGAGA+GGG | + | chr3_1:18271788-18271807 | Msa0351470:CDS | 40.0% | |
| ! | TTTTCTTCTTTCTCCCTCTC+AGG | - | chr3_1:18271804-18271823 | None:intergenic | 40.0% |
| TGAGAGGGAGAAAGAAGAAA+AGG | + | chr3_1:18271803-18271822 | Msa0351470:CDS | 40.0% | |
| GGAAATATACTCCAACTGAG+AGG | + | chr3_1:18271971-18271990 | Msa0351470:CDS | 40.0% | |
| AATATACTCCAACTGAGAGG+AGG | + | chr3_1:18271974-18271993 | Msa0351470:CDS | 40.0% | |
| !! | ACTTTCTCCTGGGTTTTTAG+AGG | + | chr3_1:18272002-18272021 | Msa0351470:CDS | 40.0% |
| ! | AAAGCATCCTCTAAAAACCC+AGG | - | chr3_1:18272012-18272031 | None:intergenic | 40.0% |
| !! | TGGGTTTTTAGAGGATGCTT+TGG | + | chr3_1:18272011-18272030 | Msa0351470:CDS | 40.0% |
| ! | TTTAGAGGATGCTTTGGATG+AGG | + | chr3_1:18272017-18272036 | Msa0351470:CDS | 40.0% |
| GGAACTGACACAGTTTAAGT+AGG | - | chr3_1:18272126-18272145 | None:intergenic | 40.0% | |
| TCATAATCCGTTTCTCTGCT+CGG | - | chr3_1:18272248-18272267 | None:intergenic | 40.0% | |
| ACTCTTCTCTCTCATCATCT+GGG | - | chr3_1:18272441-18272460 | None:intergenic | 40.0% | |
| ATATGAAACTGAAGACGACG+AGG | + | chr3_1:18272465-18272484 | Msa0351470:CDS | 40.0% | |
| TATGAGGGATGATGATTCTG+AGG | + | chr3_1:18272510-18272529 | Msa0351470:CDS | 40.0% | |
| !! | TGATTCTGAGGCAGAATATG+AGG | + | chr3_1:18272522-18272541 | Msa0351470:CDS | 40.0% |
| AGAAAATGATGCTTCGGATG+AGG | + | chr3_1:18272573-18272592 | Msa0351470:CDS | 40.0% | |
| ! | ATGTTGGGAACTTTGGAAGT+AGG | + | chr3_1:18272904-18272923 | Msa0351470:intron | 40.0% |
| ! | TGTTGGGAACTTTGGAAGTA+GGG | + | chr3_1:18272905-18272924 | Msa0351470:intron | 40.0% |
| !!! | CCGTTGTTTTTCCTCATCAA+CGG | - | chr3_1:18273183-18273202 | None:intergenic | 40.0% |
| ! | CCGTTGATGAGGAAAAACAA+CGG | + | chr3_1:18273180-18273199 | Msa0351470:intron | 40.0% |
| CATACATTAGTGCATTCCGT+AGG | - | chr3_1:18273551-18273570 | None:intergenic | 40.0% | |
| AAAAGGCAAGGCCAAAAAGA+AGG | + | chr3_1:18273654-18273673 | Msa0351470:CDS | 40.0% | |
| AAAGGCAAGGCCAAAAAGAA+GGG | + | chr3_1:18273655-18273674 | Msa0351470:CDS | 40.0% | |
| AAGGGGTTTGATTCTGATGA+AGG | + | chr3_1:18273673-18273692 | Msa0351470:CDS | 40.0% | |
| AAGGAAGGGGAAATTGCAAA+AGG | - | chr3_1:18273902-18273921 | None:intergenic | 40.0% | |
| AAAAAAAGGGAGGAAGGAAG+GGG | - | chr3_1:18273915-18273934 | None:intergenic | 40.0% | |
| GACTGAAAAATTCCTCAGCT+GGG | - | chr3_1:18274205-18274224 | None:intergenic | 40.0% | |
| AGACTGAAAAATTCCTCAGC+TGG | - | chr3_1:18274206-18274225 | None:intergenic | 40.0% | |
| GGTGGGAAAAGTGAAGAGAA+GGG | - | chr3_1:18267031-18267050 | None:intergenic | 45.0% | |
| ! | GAGAGAGCGTAGAAAAATGG+GGG | + | chr3_1:18267057-18267076 | Msa0351470:exon | 45.0% |
| ! | AGAGAGCGTAGAAAAATGGG+GGG | + | chr3_1:18267058-18267077 | Msa0351470:exon | 45.0% |
| AAATGGGGGGTGAAGAGAAA+CGG | + | chr3_1:18267071-18267090 | Msa0351470:exon | 45.0% | |
| TTTCACGCAGAAGCTAGCTA+GGG | - | chr3_1:18267256-18267275 | None:intergenic | 45.0% | |
| ATTTCACGCAGAAGCTAGCT+AGG | - | chr3_1:18267257-18267276 | None:intergenic | 45.0% | |
| GTATTGCAGGATGAAGGAGA+GGG | + | chr3_1:18267360-18267379 | Msa0351470:intron | 45.0% | |
| GTAGGGCAAGAAGTTGAAGA+GGG | + | chr3_1:18267387-18267406 | Msa0351470:CDS | 45.0% | |
| CAAGAAGTTGAAGAGGGTGA+AGG | + | chr3_1:18267393-18267412 | Msa0351470:CDS | 45.0% | |
| GAAGAAGAAGCAGAGAGTGA+AGG | + | chr3_1:18267441-18267460 | Msa0351470:CDS | 45.0% | |
| AGAGTGGAAGAAGAGAGTGA+AGG | + | chr3_1:18267486-18267505 | Msa0351470:CDS | 45.0% | |
| TGGAAGAAGAGAGTGAAGGT+AGG | + | chr3_1:18267490-18267509 | Msa0351470:CDS | 45.0% | |
| GGAAGAAGAGAGTGAAGGTA+GGG | + | chr3_1:18267491-18267510 | Msa0351470:CDS | 45.0% | |
| GAAGAAGAGAGTGAAGGTAG+GGG | + | chr3_1:18267492-18267511 | Msa0351470:CDS | 45.0% | |
| AAGAAGAGAGTGAAGGTAGG+GGG | + | chr3_1:18267493-18267512 | Msa0351470:CDS | 45.0% | |
| TGTCGTTACCAGTAAGCGTA+GGG | + | chr3_1:18267554-18267573 | Msa0351470:CDS | 45.0% | |
| ATCAAGAAGGACTACACCAG+AGG | - | chr3_1:18268061-18268080 | None:intergenic | 45.0% | |
| CATAAAGCCAGTCCTTGTTG+TGG | + | chr3_1:18268161-18268180 | Msa0351470:intron | 45.0% | |
| ! | TAAAGCCAGTCCTTGTTGTG+GGG | + | chr3_1:18268163-18268182 | Msa0351470:intron | 45.0% |
| CGGCCAATCAACAGAATTGT+GGG | + | chr3_1:18268221-18268240 | Msa0351470:intron | 45.0% | |
| GTGCCCACAATTCTGTTGAT+TGG | - | chr3_1:18268227-18268246 | None:intergenic | 45.0% | |
| ! | TTTTGGTGAAGTTGAGCTGC+CGG | + | chr3_1:18268295-18268314 | Msa0351470:intron | 45.0% |
| ! | ATCTCGTGTATCGATGTGGT+TGG | - | chr3_1:18268414-18268433 | None:intergenic | 45.0% |
| ! | GTCAATCTCGTGTATCGATG+TGG | - | chr3_1:18268418-18268437 | None:intergenic | 45.0% |
| AGATTGACGACAAAGGACAG+AGG | + | chr3_1:18268430-18268449 | Msa0351470:intron | 45.0% | |
| GGACGAAAGTAGGTCTCAAA+AGG | - | chr3_1:18268584-18268603 | None:intergenic | 45.0% | |
| AAAGGACAGAGGACGAAAGT+AGG | - | chr3_1:18268441-18268460 | None:intergenic | 45.0% | |
| AGATTGACGACAAAGGACAG+AGG | - | chr3_1:18268430-18268449 | None:intergenic | 45.0% | |
| ! | ATCTTGTGTATCGGTGTAGC+TGG | + | chr3_1:18268621-18268640 | Msa0351470:intron | 45.0% |
| GGTGTAGCTGGAAATGAAAC+TGG | + | chr3_1:18268633-18268652 | Msa0351470:intron | 45.0% | |
| GGGCTGTCTAGCTAGATTAT+TGG | - | chr3_1:18268702-18268721 | None:intergenic | 45.0% | |
| GAAGAGGAATATTGGGCACT+TGG | - | chr3_1:18268842-18268861 | None:intergenic | 45.0% | |
| TGGTGAGAAGATGGAGCATA+GGG | - | chr3_1:18268900-18268919 | None:intergenic | 45.0% | |
| ATGGTGAGAAGATGGAGCAT+AGG | - | chr3_1:18268901-18268920 | None:intergenic | 45.0% | |
| ACATAGAGACGAAAGCAGAG+AGG | + | chr3_1:18269003-18269022 | Msa0351470:intron | 45.0% | |
| !! | AGAGGAGCTTCTAGGATTCA+AGG | + | chr3_1:18269021-18269040 | Msa0351470:intron | 45.0% |
| ATAATACTTGCGCTGTTGCC+GGG | - | chr3_1:18269253-18269272 | None:intergenic | 45.0% | |
| GATAATACTTGCGCTGTTGC+CGG | - | chr3_1:18269254-18269273 | None:intergenic | 45.0% | |
| ! | TCATGATTTGGATTCTGCCC+CGG | + | chr3_1:18269788-18269807 | Msa0351470:CDS | 45.0% |
| CCGCAGTATATCTCTACAAC+AGG | - | chr3_1:18269985-18270004 | None:intergenic | 45.0% | |
| GTTGTAGAGATATACTGCGG+AGG | + | chr3_1:18269985-18270004 | Msa0351470:intron | 45.0% | |
| GCATCAGTATGAATCAGAGG+AGG | + | chr3_1:18270063-18270082 | Msa0351470:CDS | 45.0% | |
| GAACATAGGTCTCCAACACA+AGG | - | chr3_1:18270186-18270205 | None:intergenic | 45.0% | |
| TCATCTGCCACACAAATGAG+AGG | - | chr3_1:18270546-18270565 | None:intergenic | 45.0% | |
| ! | AAACAAGAAGCGCATACGCT+TGG | + | chr3_1:18270663-18270682 | Msa0351470:CDS | 45.0% |
| CTTACAGATGTTGTGCCATC+AGG | - | chr3_1:18270724-18270743 | None:intergenic | 45.0% | |
| ! | GTAATGGTTGCCACTTACCA+TGG | - | chr3_1:18270818-18270837 | None:intergenic | 45.0% |
| CCTAGTGGTCAAAGGCTTTA+TGG | - | chr3_1:18270872-18270891 | None:intergenic | 45.0% | |
| CCATAAAGCCTTTGACCACT+AGG | + | chr3_1:18270869-18270888 | Msa0351470:intron | 45.0% | |
| TAAAGCCTTTGACCACTAGG+TGG | + | chr3_1:18270872-18270891 | Msa0351470:intron | 45.0% | |
| AAAGCCTTTGACCACTAGGT+GGG | + | chr3_1:18270873-18270892 | Msa0351470:intron | 45.0% | |
| ATATATCCAACCCCACCTAG+TGG | - | chr3_1:18270887-18270906 | None:intergenic | 45.0% | |
| !! | CTAATGGTTTGGTCTACCAG+CGG | + | chr3_1:18271023-18271042 | Msa0351470:intron | 45.0% |
| !! | TAATGGTTTGGTCTACCAGC+GGG | + | chr3_1:18271024-18271043 | Msa0351470:intron | 45.0% |
| GACCAAGCCTAACAGGAAAA+AGG | - | chr3_1:18271096-18271115 | None:intergenic | 45.0% | |
| CAAGTGCACATAGTCCATTG+AGG | - | chr3_1:18271624-18271643 | None:intergenic | 45.0% | |
| CAGGGAATTCTGCAATCACA+AGG | + | chr3_1:18271648-18271667 | Msa0351470:intron | 45.0% | |
| GAATTCGACGACAAGGAAGA+GGG | - | chr3_1:18271702-18271721 | None:intergenic | 45.0% | |
| AGAATTCGACGACAAGGAAG+AGG | - | chr3_1:18271703-18271722 | None:intergenic | 45.0% | |
| CCTTGTCGTCGAATTCTCAT+CGG | + | chr3_1:18271706-18271725 | Msa0351470:CDS | 45.0% | |
| !! | TGTTGACTCAAGGCAAAGGA+AGG | + | chr3_1:18271743-18271762 | Msa0351470:CDS | 45.0% |
| AGGCTGAAAGTCAGACTATC+AGG | + | chr3_1:18271908-18271927 | Msa0351470:intron | 45.0% | |
| GGCTGAAAGTCAGACTATCA+GGG | + | chr3_1:18271909-18271928 | Msa0351470:intron | 45.0% | |
| ! | CTTACGGGTAAGAAGTACGT+TGG | - | chr3_1:18271935-18271954 | None:intergenic | 45.0% |
| ! | ATTCACCTTTTCGCGCTTAC+GGG | - | chr3_1:18271950-18271969 | None:intergenic | 45.0% |
| ! | GATTCACCTTTTCGCGCTTA+CGG | - | chr3_1:18271951-18271970 | None:intergenic | 45.0% |
| GTAAGCGCGAAAAGGTGAAT+CGG | + | chr3_1:18271950-18271969 | Msa0351470:CDS | 45.0% | |
| GCTTCCTCATCCTGAAGAAA+GGG | - | chr3_1:18272165-18272184 | None:intergenic | 45.0% | |
| TGCTTCCTCATCCTGAAGAA+AGG | - | chr3_1:18272166-18272185 | None:intergenic | 45.0% | |
| AACACAGCGTCACTATGAAG+AGG | + | chr3_1:18272206-18272225 | Msa0351470:CDS | 45.0% | |
| GACTCTTCTCTCTCATCATC+TGG | - | chr3_1:18272442-18272461 | None:intergenic | 45.0% | |
| AAGACGACGAGGAAGAAGAA+AGG | + | chr3_1:18272476-18272495 | Msa0351470:CDS | 45.0% | |
| TGAGGCAGAATATGAGGATG+AGG | + | chr3_1:18272528-18272547 | Msa0351470:CDS | 45.0% | |
| ! | GTTGGGAACTTTGGAAGTAG+GGG | + | chr3_1:18272906-18272925 | Msa0351470:intron | 45.0% |
| ! | TTGGGAACTTTGGAAGTAGG+GGG | + | chr3_1:18272907-18272926 | Msa0351470:intron | 45.0% |
| !! | GGTTGCGTTGGTTTCAGTTA+GGG | + | chr3_1:18272936-18272955 | Msa0351470:intron | 45.0% |
| ACATCTCTCAACCGTTGATG+AGG | + | chr3_1:18273169-18273188 | Msa0351470:intron | 45.0% | |
| TAGAGACCATGGCTGAAAGA+TGG | - | chr3_1:18273336-18273355 | None:intergenic | 45.0% | |
| ATCTTTCAGCCATGGTCTCT+AGG | + | chr3_1:18273335-18273354 | Msa0351470:intron | 45.0% | |
| CTAACTCTACCTAGAGACCA+TGG | - | chr3_1:18273347-18273366 | None:intergenic | 45.0% | |
| CATTAGTGCATTCCGTAGGT+GGG | - | chr3_1:18273547-18273566 | None:intergenic | 45.0% | |
| ACATTAGTGCATTCCGTAGG+TGG | - | chr3_1:18273548-18273567 | None:intergenic | 45.0% | |
| AAGGCAAGGCCAAAAAGAAG+GGG | + | chr3_1:18273656-18273675 | Msa0351470:CDS | 45.0% | |
| !! | GTTGTTGGTTTCTTAGGAGG+AGG | - | chr3_1:18273703-18273722 | None:intergenic | 45.0% |
| !! | TGGGTTGTTGGTTTCTTAGG+AGG | - | chr3_1:18273706-18273725 | None:intergenic | 45.0% |
| !! | CGATGGGTTGTTGGTTTCTT+AGG | - | chr3_1:18273709-18273728 | None:intergenic | 45.0% |
| CATAATTGTCATCCGGCGAT+GGG | - | chr3_1:18273725-18273744 | None:intergenic | 45.0% | |
| ACATAATTGTCATCCGGCGA+TGG | - | chr3_1:18273726-18273745 | None:intergenic | 45.0% | |
| !!! | CAATTATAAATATATTTTTT+TGG | - | chr3_1:18266900-18266919 | None:intergenic | 5.0% |
| !! | TAAAAAAAATTATACAAATT+TGG | - | chr3_1:18267874-18267893 | None:intergenic | 5.0% |
| GGGTGGGAAAAGTGAAGAGA+AGG | - | chr3_1:18267032-18267051 | None:intergenic | 50.0% | |
| TACGCTCTCTCTGTTTGGGT+GGG | - | chr3_1:18267048-18267067 | None:intergenic | 50.0% | |
| TCTCTTCGGAGATCAATCCG+AGG | + | chr3_1:18267111-18267130 | Msa0351470:CDS | 50.0% | |
| GGTATTGCAGGATGAAGGAG+AGG | + | chr3_1:18267359-18267378 | Msa0351470:intron | 50.0% | |
| GGTAGGGCAAGAAGTTGAAG+AGG | + | chr3_1:18267386-18267405 | Msa0351470:CDS | 50.0% | |
| AGAGGGTGAAGGAGAAGTTG+AGG | + | chr3_1:18267404-18267423 | Msa0351470:CDS | 50.0% | |
| GAGGGTGAAGGAGAAGTTGA+GGG | + | chr3_1:18267405-18267424 | Msa0351470:CDS | 50.0% | |
| AGGGTGAAGGAGAAGTTGAG+GGG | + | chr3_1:18267406-18267425 | Msa0351470:CDS | 50.0% | |
| AGAGAGTGAAGGTGAGAGAG+AGG | + | chr3_1:18267452-18267471 | Msa0351470:CDS | 50.0% | |
| AGTGAAGGTGAGAGAGAGGT+TGG | + | chr3_1:18267456-18267475 | Msa0351470:CDS | 50.0% | |
| !! | AGAGGTTGGTGATCAGAGAG+TGG | + | chr3_1:18267470-18267489 | Msa0351470:CDS | 50.0% |
| AGAAGAGAGTGAAGGTAGGG+GGG | + | chr3_1:18267494-18267513 | Msa0351470:CDS | 50.0% | |
| ! | GTGTCGTTACCAGTAAGCGT+AGG | + | chr3_1:18267553-18267572 | Msa0351470:CDS | 50.0% |
| AACGACATCCCTACGCTTAC+TGG | - | chr3_1:18267565-18267584 | None:intergenic | 50.0% | |
| CGTAGGGATGTCGTTGAAAG+TGG | + | chr3_1:18267570-18267589 | Msa0351470:CDS | 50.0% | |
| ACAGCACCAACCCAACAATG+TGG | - | chr3_1:18267693-18267712 | None:intergenic | 50.0% | |
| GGAATCCTAGGTTCGAACTC+AGG | - | chr3_1:18267978-18267997 | None:intergenic | 50.0% | |
| GATGTGTGAGTCTAGCCACT+AGG | + | chr3_1:18268016-18268035 | Msa0351470:intron | 50.0% | |
| ! | AAAGCCAGTCCTTGTTGTGG+GGG | + | chr3_1:18268164-18268183 | Msa0351470:intron | 50.0% |
| CTCATAAACCCCCCACAACA+AGG | - | chr3_1:18268176-18268195 | None:intergenic | 50.0% | |
| GCGGCCAATCAACAGAATTG+TGG | + | chr3_1:18268220-18268239 | Msa0351470:intron | 50.0% | |
| TCAACAGAATTGTGGGCACC+AGG | + | chr3_1:18268228-18268247 | Msa0351470:intron | 50.0% | |
| CAACAGAATTGTGGGCACCA+GGG | + | chr3_1:18268229-18268248 | Msa0351470:intron | 50.0% | |
| TTTGGTGAAGTTGAGCTGCC+GGG | + | chr3_1:18268296-18268315 | Msa0351470:intron | 50.0% | |
| TTGGGCCCAAGATAGCAGAT+AGG | - | chr3_1:18268378-18268397 | None:intergenic | 50.0% | |
| GGGAATTGTAAACGGGGACT+AGG | - | chr3_1:18268880-18268899 | None:intergenic | 50.0% | |
| TGCTCCATCTTCTCACCATC+AGG | + | chr3_1:18268902-18268921 | Msa0351470:intron | 50.0% | |
| GAAAGCAGAGAGGAGCTTCT+AGG | + | chr3_1:18269013-18269032 | Msa0351470:intron | 50.0% | |
| ! | TCTGGTGATGTTGAGCTGCT+GGG | - | chr3_1:18269079-18269098 | None:intergenic | 50.0% |
| ! | TTCTGGTGATGTTGAGCTGC+TGG | - | chr3_1:18269080-18269099 | None:intergenic | 50.0% |
| CGGCCAATCAGCAGAATTGT+GGG | - | chr3_1:18269154-18269173 | None:intergenic | 50.0% | |
| CTCGTAAATCTCCCGCAACA+AGG | + | chr3_1:18269199-18269218 | Msa0351470:intron | 50.0% | |
| TGTCTAAGTGCCAATCCACC+CGG | + | chr3_1:18269232-18269251 | Msa0351470:intron | 50.0% | |
| GTAGAGATATACTGCGGAGG+AGG | + | chr3_1:18269988-18270007 | Msa0351470:intron | 50.0% | |
| AGATATACTGCGGAGGAGGA+AGG | + | chr3_1:18269992-18270011 | Msa0351470:CDS | 50.0% | |
| GATATACTGCGGAGGAGGAA+GGG | + | chr3_1:18269993-18270012 | Msa0351470:CDS | 50.0% | |
| TGAAAAGAGCTTGAGACCCG+AGG | + | chr3_1:18270021-18270040 | Msa0351470:CDS | 50.0% | |
| AACACAAGGCAGACCTTTCC+TGG | - | chr3_1:18270172-18270191 | None:intergenic | 50.0% | |
| AGGAAAGGTCTGCCTTGTGT+TGG | + | chr3_1:18270171-18270190 | Msa0351470:intron | 50.0% | |
| AAGCCTTTGACCACTAGGTG+GGG | + | chr3_1:18270874-18270893 | Msa0351470:intron | 50.0% | |
| ACATGGTCCATGATCGAGCA+AGG | - | chr3_1:18270926-18270945 | None:intergenic | 50.0% | |
| ! | TACCAGCGGGTCTTTTCTAC+AGG | + | chr3_1:18271037-18271056 | Msa0351470:intron | 50.0% |
| GCAATGCTCGCTTTGTAAGG+TGG | + | chr3_1:18271450-18271469 | Msa0351470:CDS | 50.0% | |
| CGCTTTGTAAGGTGGTCTGA+TGG | + | chr3_1:18271458-18271477 | Msa0351470:CDS | 50.0% | |
| CCGATGAGAATTCGACGACA+AGG | - | chr3_1:18271709-18271728 | None:intergenic | 50.0% | |
| TCTTACCCGTAAGCGCGAAA+AGG | + | chr3_1:18271942-18271961 | Msa0351470:CDS | 50.0% | |
| TGCTCCCTTTCTTCAGGATG+AGG | + | chr3_1:18272158-18272177 | Msa0351470:intron | 50.0% | |
| CAGAAGTCCGAGCAGAGAAA+CGG | + | chr3_1:18272238-18272257 | Msa0351470:CDS | 50.0% | |
| CATCATCTGGGTAACCCACT+TGG | - | chr3_1:18272429-18272448 | None:intergenic | 50.0% | |
| AAAGGCCTCGTTCTCGTATG+AGG | + | chr3_1:18272494-18272513 | Msa0351470:CDS | 50.0% | |
| AAGGCCTCGTTCTCGTATGA+GGG | + | chr3_1:18272495-18272514 | Msa0351470:CDS | 50.0% | |
| TCATCCCTCATACGAGAACG+AGG | - | chr3_1:18272502-18272521 | None:intergenic | 50.0% | |
| TTCGGATGAGGACGAAGATG+AGG | + | chr3_1:18272585-18272604 | Msa0351470:CDS | 50.0% | |
| ! | TGGGAACTTTGGAAGTAGGG+GGG | + | chr3_1:18272908-18272927 | Msa0351470:intron | 50.0% |
| ACTGAAACCAACGCAACCCA+TGG | - | chr3_1:18272934-18272953 | None:intergenic | 50.0% | |
| !! | GGGTTGCGTTGGTTTCAGTT+AGG | + | chr3_1:18272935-18272954 | Msa0351470:intron | 50.0% |
| GAGTGACCATCTTTCAGCCA+TGG | + | chr3_1:18273327-18273346 | Msa0351470:intron | 50.0% | |
| ! | TCTGTTAGGTTGCCCACCTA+CGG | + | chr3_1:18273532-18273551 | Msa0351470:intron | 50.0% |
| AGAAACCAACAACCCATCGC+CGG | + | chr3_1:18273710-18273729 | Msa0351470:CDS | 50.0% | |
| CTACGCTCTCTCTGTTTGGG+TGG | - | chr3_1:18267049-18267068 | None:intergenic | 55.0% | |
| CTTCGGAGATCAATCCGAGG+AGG | + | chr3_1:18267114-18267133 | Msa0351470:CDS | 55.0% | |
| TTGCAGGATGAAGGAGAGGG+AGG | + | chr3_1:18267363-18267382 | Msa0351470:intron | 55.0% | |
| TGCAGGATGAAGGAGAGGGA+GGG | + | chr3_1:18267364-18267383 | Msa0351470:intron | 55.0% | |
| ATGAAGGAGAGGGAGGGGTA+GGG | + | chr3_1:18267370-18267389 | Msa0351470:CDS | 55.0% | |
| TGAAGGAGAAGTTGAGGGGC+AGG | + | chr3_1:18267410-18267429 | Msa0351470:CDS | 55.0% | |
| GAAGGAGAAGTTGAGGGGCA+GGG | + | chr3_1:18267411-18267430 | Msa0351470:CDS | 55.0% | |
| CAGCAGCTAGAAGAAGCCTG+AGG | + | chr3_1:18267622-18267641 | Msa0351470:CDS | 55.0% | |
| TGGAGAAGCGGCACACTATG+TGG | + | chr3_1:18267757-18267776 | Msa0351470:intron | 55.0% | |
| ATGGGCCTGAGTTCGAACCT+AGG | + | chr3_1:18267970-18267989 | Msa0351470:intron | 55.0% | |
| ! | AAGCCAGTCCTTGTTGTGGG+GGG | + | chr3_1:18268165-18268184 | Msa0351470:intron | 55.0% |
| AAACCCCCCACAACAAGGAC+TGG | - | chr3_1:18268171-18268190 | None:intergenic | 55.0% | |
| ! | TGTTGATTGGCCGCGATCCT+CGG | - | chr3_1:18268214-18268233 | None:intergenic | 55.0% |
| CGCAAAGAGTAGCAGTGTCC+AGG | - | chr3_1:18268322-18268341 | None:intergenic | 55.0% | |
| GCGCCCACAATTCTGCTGAT+TGG | + | chr3_1:18269148-18269167 | Msa0351470:intron | 55.0% | |
| GCGGCCAATCAGCAGAATTG+TGG | - | chr3_1:18269155-18269174 | None:intergenic | 55.0% | |
| TAAGCCACTTGGGCCACCAT+TGG | + | chr3_1:18270111-18270130 | Msa0351470:CDS | 55.0% | |
| AACTCCAATGGTGGCCCAAG+TGG | - | chr3_1:18270118-18270137 | None:intergenic | 55.0% | |
| TTTCCTGGAAGAGCTGGTGG+TGG | - | chr3_1:18270157-18270176 | None:intergenic | 55.0% | |
| ACCACCAGCTCTTCCAGGAA+AGG | + | chr3_1:18270156-18270175 | Msa0351470:CDS | 55.0% | |
| ACCTTTCCTGGAAGAGCTGG+TGG | - | chr3_1:18270160-18270179 | None:intergenic | 55.0% | |
| CAGACCTTTCCTGGAAGAGC+TGG | - | chr3_1:18270163-18270182 | None:intergenic | 55.0% | |
| CAACCCCACCTAGTGGTCAA+AGG | - | chr3_1:18270880-18270899 | None:intergenic | 55.0% | |
| CTTTGACCACTAGGTGGGGT+TGG | + | chr3_1:18270878-18270897 | Msa0351470:intron | 55.0% | |
| GATGCCACCTTGCTCGATCA+TGG | + | chr3_1:18270916-18270935 | Msa0351470:intron | 55.0% | |
| TGGTCCATGATCGAGCAAGG+TGG | - | chr3_1:18270923-18270942 | None:intergenic | 55.0% | |
| CACCTGTAGAAAAGACCCGC+TGG | - | chr3_1:18271042-18271061 | None:intergenic | 55.0% | |
| ! | CGGGTCTTTTCTACAGGTGC+TGG | + | chr3_1:18271043-18271062 | Msa0351470:intron | 55.0% |
| AGTTGACGCCTCCTCTCAGT+TGG | - | chr3_1:18271985-18272004 | None:intergenic | 55.0% | |
| !! | AGGAGGCGTCAACTTTCTCC+TGG | + | chr3_1:18271991-18272010 | Msa0351470:CDS | 55.0% |
| !! | GGAGGCGTCAACTTTCTCCT+GGG | + | chr3_1:18271992-18272011 | Msa0351470:CDS | 55.0% |
| GGCTTACGAGGGATGCTCTT+TGG | - | chr3_1:18272373-18272392 | None:intergenic | 55.0% | |
| GGAGGAACGATGGCTTACGA+GGG | - | chr3_1:18272384-18272403 | None:intergenic | 55.0% | |
| TTTGCTGGTGGGAGGAACGA+TGG | - | chr3_1:18272394-18272413 | None:intergenic | 55.0% | |
| TCCCACCAGCAAAATCCTCC+CGG | + | chr3_1:18272401-18272420 | Msa0351470:CDS | 55.0% | |
| AAAATCCTCCCGGCACCAAG+TGG | + | chr3_1:18272411-18272430 | Msa0351470:CDS | 55.0% | |
| AAATCCTCCCGGCACCAAGT+GGG | + | chr3_1:18272412-18272431 | Msa0351470:CDS | 55.0% | |
| TTTGGAAGTAGGGGGGCCAT+GGG | + | chr3_1:18272915-18272934 | Msa0351470:intron | 55.0% | |
| ATTCCTCAGCTGGGTTCCCT+TGG | - | chr3_1:18274196-18274215 | None:intergenic | 55.0% | |
| GCAGGATGAAGGAGAGGGAG+GGG | + | chr3_1:18267365-18267384 | Msa0351470:intron | 60.0% | |
| GATGAAGGAGAGGGAGGGGT+AGG | + | chr3_1:18267369-18267388 | Msa0351470:CDS | 60.0% | |
| AGAAGTTGAGGGGCAGGGAG+AGG | + | chr3_1:18267416-18267435 | Msa0351470:CDS | 60.0% | |
| ! | AGAACCGACTCTGACAGCCG+AGG | + | chr3_1:18268194-18268213 | Msa0351470:intron | 60.0% |
| CGATCCTCGGCTGTCAGAGT+CGG | - | chr3_1:18269174-18269193 | None:intergenic | 60.0% | |
| ACTCTGACAGCCGAGGATCG+CGG | + | chr3_1:18268201-18268220 | Msa0351470:intron | 60.0% | |
| AGAGTAGCAGTGTCCAGGCC+CGG | - | chr3_1:18268317-18268336 | None:intergenic | 60.0% | |
| TGATGTTGAGCTGCTGGGCC+TGG | - | chr3_1:18269074-18269093 | None:intergenic | 60.0% | |
| CAGCAGAATTGTGGGCGCCA+GGG | - | chr3_1:18269146-18269165 | None:intergenic | 60.0% | |
| TCAGCAGAATTGTGGGCGCC+AGG | - | chr3_1:18269147-18269166 | None:intergenic | 60.0% | |
| ! | TGCTGATTGGCCGCGATCCT+CGG | + | chr3_1:18269161-18269180 | Msa0351470:intron | 60.0% |
| ACTCTGACAGCCGAGGATCG+CGG | - | chr3_1:18268201-18268220 | None:intergenic | 60.0% | |
| CGATCCTCGGCTGTCAGAGT+CGG | + | chr3_1:18269174-18269193 | Msa0351470:intron | 60.0% | |
| ! | AGAACCGACTCTGACAGCCG+AGG | - | chr3_1:18268194-18268213 | None:intergenic | 60.0% |
| ATACTTGCGCTGTTGCCGGG+TGG | - | chr3_1:18269250-18269269 | None:intergenic | 60.0% | |
| TATGGGGTACGCAGCTCAGC+AGG | + | chr3_1:18269854-18269873 | Msa0351470:CDS | 60.0% | |
| !! | AGAGCTGGTGGTGGACGTAG+TGG | - | chr3_1:18270148-18270167 | None:intergenic | 60.0% |
| GGGAGGAACGATGGCTTACG+AGG | - | chr3_1:18272385-18272404 | None:intergenic | 60.0% | |
| ! | GGGAGGATTTTGCTGGTGGG+AGG | - | chr3_1:18272402-18272421 | None:intergenic | 60.0% |
| ! | GCCGGGAGGATTTTGCTGGT+GGG | - | chr3_1:18272405-18272424 | None:intergenic | 60.0% |
| ! | TGCCGGGAGGATTTTGCTGG+TGG | - | chr3_1:18272406-18272425 | None:intergenic | 60.0% |
| !! | TGGTGCCGGGAGGATTTTGC+TGG | - | chr3_1:18272409-18272428 | None:intergenic | 60.0% |
| !! | TGGGTAACCCACTTGGTGCC+GGG | - | chr3_1:18272422-18272441 | None:intergenic | 60.0% |
| !! | CTGGGTAACCCACTTGGTGC+CGG | - | chr3_1:18272423-18272442 | None:intergenic | 60.0% |
| ! | CTTTGGAAGTAGGGGGGCCA+TGG | + | chr3_1:18272914-18272933 | Msa0351470:intron | 60.0% |
| !! | GTCATCCGGCGATGGGTTGT+TGG | - | chr3_1:18273718-18273737 | None:intergenic | 60.0% |
| ACTCCAAGGGAACCCAGCTG+AGG | + | chr3_1:18274190-18274209 | Msa0351470:three_prime_UTR | 60.0% | |
| TGAAGTTGAGCTGCCGGGCC+TGG | + | chr3_1:18268301-18268320 | Msa0351470:intron | 65.0% | |
| CGCAGAGAGCAGCAGTGTCC+AGG | + | chr3_1:18269053-18269072 | Msa0351470:intron | 65.0% | |
| TGCGCTGTTGCCGGGTGGAT+TGG | - | chr3_1:18269245-18269264 | None:intergenic | 65.0% | |
| CGTCCACCACCAGCTCTTCC+AGG | + | chr3_1:18270151-18270170 | Msa0351470:CDS | 65.0% | |
| !! | GTAACCCACTTGGTGCCGGG+AGG | - | chr3_1:18272419-18272438 | None:intergenic | 65.0% |
| ! | AGGGGGGCCATGGGTTGCGT+TGG | + | chr3_1:18272924-18272943 | Msa0351470:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 18266881 | 18274313 | 18266881 | ID=Msa0351470;Name=Msa0351470 |
| chr3_1 | mRNA | 18266881 | 18274313 | 18266881 | ID=Msa0351470-mRNA-1;Parent=Msa0351470;Name=Msa0351470-mRNA-1;_AED=0.06;_eAED=0.06;_QI=192|1|1|1|0.90|0.83|12|321|606 |
| chr3_1 | exon | 18266881 | 18267186 | 18266881 | ID=Msa0351470-mRNA-1:exon:4303;Parent=Msa0351470-mRNA-1 |
| chr3_1 | exon | 18267369 | 18267643 | 18267369 | ID=Msa0351470-mRNA-1:exon:4304;Parent=Msa0351470-mRNA-1 |
| chr3_1 | exon | 18269758 | 18269896 | 18269758 | ID=Msa0351470-mRNA-1:exon:4305;Parent=Msa0351470-mRNA-1 |
| chr3_1 | exon | 18269992 | 18270177 | 18269992 | ID=Msa0351470-mRNA-1:exon:4306;Parent=Msa0351470-mRNA-1 |
| chr3_1 | exon | 18270562 | 18270738 | 18270562 | ID=Msa0351470-mRNA-1:exon:4307;Parent=Msa0351470-mRNA-1 |
| chr3_1 | exon | 18271443 | 18271574 | 18271443 | ID=Msa0351470-mRNA-1:exon:4308;Parent=Msa0351470-mRNA-1 |
| chr3_1 | exon | 18271651 | 18271830 | 18271651 | ID=Msa0351470-mRNA-1:exon:4309;Parent=Msa0351470-mRNA-1 |
| chr3_1 | exon | 18271910 | 18272038 | 18271910 | ID=Msa0351470-mRNA-1:exon:4310;Parent=Msa0351470-mRNA-1 |
| chr3_1 | exon | 18272174 | 18272278 | 18272174 | ID=Msa0351470-mRNA-1:exon:4311;Parent=Msa0351470-mRNA-1 |
| chr3_1 | exon | 18272361 | 18272606 | 18272361 | ID=Msa0351470-mRNA-1:exon:4312;Parent=Msa0351470-mRNA-1 |
| chr3_1 | exon | 18273628 | 18273771 | 18273628 | ID=Msa0351470-mRNA-1:exon:4313;Parent=Msa0351470-mRNA-1 |
| chr3_1 | exon | 18273999 | 18274313 | 18273999 | ID=Msa0351470-mRNA-1:exon:4314;Parent=Msa0351470-mRNA-1 |
| chr3_1 | five_prime_UTR | 18266881 | 18267072 | 18266881 | ID=Msa0351470-mRNA-1:five_prime_utr;Parent=Msa0351470-mRNA-1 |
| chr3_1 | CDS | 18267073 | 18267186 | 18267073 | ID=Msa0351470-mRNA-1:cds;Parent=Msa0351470-mRNA-1 |
| chr3_1 | CDS | 18267369 | 18267643 | 18267369 | ID=Msa0351470-mRNA-1:cds;Parent=Msa0351470-mRNA-1 |
| chr3_1 | CDS | 18269758 | 18269896 | 18269758 | ID=Msa0351470-mRNA-1:cds;Parent=Msa0351470-mRNA-1 |
| chr3_1 | CDS | 18269992 | 18270177 | 18269992 | ID=Msa0351470-mRNA-1:cds;Parent=Msa0351470-mRNA-1 |
| chr3_1 | CDS | 18270562 | 18270738 | 18270562 | ID=Msa0351470-mRNA-1:cds;Parent=Msa0351470-mRNA-1 |
| chr3_1 | CDS | 18271443 | 18271574 | 18271443 | ID=Msa0351470-mRNA-1:cds;Parent=Msa0351470-mRNA-1 |
| chr3_1 | CDS | 18271651 | 18271830 | 18271651 | ID=Msa0351470-mRNA-1:cds;Parent=Msa0351470-mRNA-1 |
| chr3_1 | CDS | 18271910 | 18272038 | 18271910 | ID=Msa0351470-mRNA-1:cds;Parent=Msa0351470-mRNA-1 |
| chr3_1 | CDS | 18272174 | 18272278 | 18272174 | ID=Msa0351470-mRNA-1:cds;Parent=Msa0351470-mRNA-1 |
| chr3_1 | CDS | 18272361 | 18272606 | 18272361 | ID=Msa0351470-mRNA-1:cds;Parent=Msa0351470-mRNA-1 |
| chr3_1 | CDS | 18273628 | 18273765 | 18273628 | ID=Msa0351470-mRNA-1:cds;Parent=Msa0351470-mRNA-1 |
| chr3_1 | three_prime_UTR | 18273766 | 18273771 | 18273766 | ID=Msa0351470-mRNA-1:three_prime_utr;Parent=Msa0351470-mRNA-1 |
| chr3_1 | three_prime_UTR | 18273999 | 18274313 | 18273999 | ID=Msa0351470-mRNA-1:three_prime_utr;Parent=Msa0351470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
