AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0355670

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0355670 MtrunA17_Chr3g0092131 98.951 286 3 0 1 286 79 364 0.0 585
Msa0355670 MtrunA17_Chr4g0060811 81.413 269 50 0 1 269 83 351 2.50e-166 466
Msa0355670 MtrunA17_Chr5g0434621 45.736 258 138 2 1 258 81 336 2.76e-80 246
Msa0355670 MtrunA17_Chr2g0294301 42.045 264 147 5 1 259 88 350 2.30e-62 201
Msa0355670 MtrunA17_Chr4g0068441 41.288 264 149 4 1 259 88 350 4.11e-62 200
Msa0355670 MtrunA17_Chr4g0017431 35.741 263 165 3 1 260 85 346 1.84e-61 198
Msa0355670 MtrunA17_Chr5g0438621 40.385 260 147 6 7 262 92 347 1.01e-59 193
Msa0355670 MtrunA17_Chr2g0294311 39.544 263 155 3 1 260 95 356 1.05e-59 194
Msa0355670 MtrunA17_Chr8g0374101 37.354 257 154 5 9 259 103 358 6.47e-57 187
Msa0355670 MtrunA17_Chr5g0438631 37.308 260 156 5 7 262 90 346 1.65e-56 185
Msa0355670 MtrunA17_Chr3g0077571 36.471 255 159 2 1 255 84 335 5.00e-56 184
Msa0355670 MtrunA17_Chr3g0131321 31.154 260 175 3 1 257 91 349 2.24e-52 176
Msa0355670 MtrunA17_Chr7g0275021 33.582 268 173 4 1 266 89 353 1.57e-51 173
Msa0355670 MtrunA17_Chr8g0380041 35.628 247 154 4 13 255 95 340 3.42e-51 172
Msa0355670 MtrunA17_Chr1g0189901 34.615 260 167 3 1 258 86 344 5.58e-51 171
Msa0355670 MtrunA17_Chr7g0275011 33.858 254 165 3 9 260 97 349 8.53e-51 171
Msa0355670 MtrunA17_Chr7g0275001 34.601 263 168 3 1 260 80 341 1.55e-50 170
Msa0355670 MtrunA17_Chr3g0086641 32.540 252 166 3 8 255 96 347 3.90e-50 169
Msa0355670 MtrunA17_Chr3g0105401 34.221 263 164 5 4 261 87 345 4.59e-50 168
Msa0355670 MtrunA17_Chr2g0285061 34.599 237 151 3 23 255 106 342 6.09e-50 169
Msa0355670 MtrunA17_Chr4g0008851 34.902 255 161 4 9 259 95 348 9.53e-50 168
Msa0355670 MtrunA17_Chr3g0120861 35.385 260 162 5 4 260 97 353 1.46e-49 167
Msa0355670 MtrunA17_Chr1g0189931 34.100 261 169 3 1 259 87 346 1.53e-49 167
Msa0355670 MtrunA17_Chr7g0274991 34.783 253 162 3 9 259 96 347 1.72e-49 167
Msa0355670 MtrunA17_Chr1g0182811 33.969 262 168 5 1 258 88 348 1.50e-47 162
Msa0355670 MtrunA17_Chr3g0077581 39.062 256 148 7 8 255 94 349 1.70e-47 162
Msa0355670 MtrunA17_Chr7g0215961 32.806 253 167 3 9 259 83 334 3.56e-46 158
Msa0355670 MtrunA17_Chr6g0457921 34.510 255 160 4 9 259 93 344 4.59e-45 156
Msa0355670 MtrunA17_Chr5g0396511 31.418 261 174 3 1 258 101 359 1.53e-44 155
Msa0355670 MtrunA17_Chr1g0189891 34.221 263 160 6 1 259 85 338 1.87e-44 154
Msa0355670 MtrunA17_Chr5g0438641 32.184 261 165 7 7 261 94 348 4.80e-44 153
Msa0355670 MtrunA17_Chr6g0459921 33.478 230 144 5 37 260 119 345 1.10e-42 149
Msa0355670 MtrunA17_Chr2g0301641 33.208 265 160 6 3 258 102 358 4.88e-42 149
Msa0355670 MtrunA17_Chr1g0156921 31.783 258 172 3 7 262 104 359 1.44e-41 147
Msa0355670 MtrunA17_Chr6g0455661 34.389 221 136 5 46 260 239 456 1.55e-41 149
Msa0355670 MtrunA17_Chr8g0371491 32.558 258 168 5 7 261 98 352 2.09e-41 146
Msa0355670 MtrunA17_Chr8g0371481 31.418 261 168 5 7 261 103 358 7.62e-41 145
Msa0355670 MtrunA17_Chr1g0156911 30.038 263 179 4 7 267 99 358 1.08e-39 141
Msa0355670 MtrunA17_Chr1g0156931 31.008 258 172 4 7 262 103 356 1.37e-39 141
Msa0355670 MtrunA17_Chr8g0371471 30.233 258 174 5 7 261 103 357 2.95e-39 140
Msa0355670 MtrunA17_Chr3g0099151 30.364 247 162 5 16 258 163 403 3.76e-39 141
Msa0355670 MtrunA17_Chr2g0320671 33.333 258 164 6 6 259 91 344 4.07e-39 140
Msa0355670 MtrunA17_Chr8g0370951 30.116 259 175 4 4 258 93 349 7.07e-39 140
Msa0355670 MtrunA17_Chr5g0405821 31.621 253 167 5 7 256 107 356 1.08e-38 139
Msa0355670 MtrunA17_Chr8g0341001 33.716 261 158 8 7 259 94 347 1.33e-38 139
Msa0355670 MtrunA17_Chr5g0432101 32.963 270 167 7 7 266 95 360 8.22e-38 137
Msa0355670 MtrunA17_Chr5g0444401 28.216 241 164 3 22 259 110 344 1.17e-37 136
Msa0355670 MtrunA17_Chr3g0142941 31.154 260 173 5 7 263 109 365 1.79e-37 136
Msa0355670 MtrunA17_Chr3g0142921 31.008 258 173 4 7 262 99 353 2.66e-37 135
Msa0355670 MtrunA17_Chr3g0099161 27.984 243 172 2 16 258 168 407 7.90e-37 135
Msa0355670 MtrunA17_Chr1g0156891 30.385 260 172 5 7 262 106 360 1.20e-35 131
Msa0355670 MtrunA17_Chr1g0156901 29.845 258 176 4 7 262 112 366 1.55e-35 131
Msa0355670 MtrunA17_Chr3g0099231 26.336 262 186 3 1 258 84 342 2.24e-35 130
Msa0355670 MtrunA17_Chr3g0085881 33.852 257 155 7 1 255 87 330 2.79e-35 130
Msa0355670 MtrunA17_Chr5g0405831 28.906 256 176 5 7 259 106 358 5.07e-35 129
Msa0355670 MtrunA17_Chr2g0285001 34.583 240 142 7 23 256 108 338 1.80e-34 128
Msa0355670 MtrunA17_Chr4g0027521 33.460 263 158 8 7 259 89 344 4.91e-34 126
Msa0355670 MtrunA17_Chr2g0284921 33.735 249 147 8 13 255 101 337 6.16e-34 126
Msa0355670 MtrunA17_Chr8g0344941 29.851 268 169 6 1 258 97 355 1.19e-33 126
Msa0355670 MtrunA17_Chr2g0330781 32.558 258 165 7 7 259 93 346 6.03e-33 124
Msa0355670 MtrunA17_Chr3g0085231 30.502 259 162 6 1 255 85 329 2.49e-32 122
Msa0355670 MtrunA17_Chr8g0380031 33.193 238 142 6 23 255 158 383 3.13e-32 122
Msa0355670 MtrunA17_Chr2g0284991 32.377 244 154 6 23 262 107 343 3.74e-32 122
Msa0355670 MtrunA17_Chr2g0284951 34.454 238 139 6 23 255 107 332 7.37e-32 121
Msa0355670 MtrunA17_Chr8g0370961 28.384 229 151 5 37 259 6 227 7.79e-32 118
Msa0355670 MtrunA17_Chr4g0027571 32.710 214 138 4 50 259 3 214 1.15e-31 117
Msa0355670 MtrunA17_Chr8g0349341 28.512 242 156 4 22 255 111 343 2.86e-31 119
Msa0355670 MtrunA17_Chr8g0344931 30.085 236 154 4 23 255 112 339 3.72e-31 119
Msa0355670 MtrunA17_Chr2g0283191 29.961 257 162 7 7 250 101 352 6.63e-31 118
Msa0355670 MtrunA17_Chr4g0046151 29.104 268 169 8 7 259 98 359 2.20e-30 117
Msa0355670 MtrunA17_Chr5g0420811 31.179 263 159 7 1 257 88 334 1.85e-29 114
Msa0355670 MtrunA17_Chr1g0157001 28.625 269 168 6 7 264 98 353 2.27e-29 114
Msa0355670 MtrunA17_Chr5g0437421 29.249 253 166 5 7 250 94 342 1.37e-28 112
Msa0355670 MtrunA17_Chr8g0349321 26.437 261 172 5 3 255 95 343 8.10e-28 110
Msa0355670 MtrunA17_Chr8g0349301 29.032 217 139 4 12 225 103 307 5.46e-26 104
Msa0355670 MtrunA17_Chr2g0284941 32.218 239 132 6 23 258 107 318 1.80e-25 103
Msa0355670 MtrunA17_Chr7g0229581 37.857 140 84 2 123 259 8 147 2.63e-25 98.6
Msa0355670 MtrunA17_Chr8g0370981 25.566 309 178 7 6 267 105 408 1.35e-24 102
Msa0355670 MtrunA17_Chr5g0440501 24.545 220 154 3 46 255 10 227 8.40e-24 97.1
Msa0355670 MtrunA17_Chr7g0226911 24.917 301 167 8 1 259 86 369 1.78e-23 98.6
Msa0355670 MtrunA17_Chr7g0271551 29.412 272 157 8 9 259 92 349 4.28e-23 97.4
Msa0355670 MtrunA17_Chr8g0349331 27.203 261 140 5 3 255 93 311 1.76e-22 95.1
Msa0355670 MtrunA17_Chr7g0226931 26.408 284 158 8 21 259 106 383 3.29e-21 92.4
Msa0355670 MtrunA17_Chr6g0450731 26.953 256 159 7 23 260 102 347 1.89e-20 89.7
Msa0355670 MtrunA17_Chr4g0018571 38.571 140 83 2 123 259 31 170 3.63e-20 85.5
Msa0355670 MtrunA17_Chr1g0160031 26.592 267 163 8 20 259 106 366 6.92e-20 88.6
Msa0355670 MtrunA17_Chr8g0381581 25.338 296 176 9 1 262 91 375 1.34e-19 87.8
Msa0355670 MtrunA17_Chr1g0160101 25.347 288 176 11 1 258 93 371 1.75e-19 87.4
Msa0355670 MtrunA17_Chr7g0254461 25.000 292 177 9 1 259 94 376 2.89e-19 87.0
Msa0355670 MtrunA17_Chr1g0189911 29.457 129 89 2 134 260 1 129 9.81e-19 80.9
Msa0355670 MtrunA17_Chr7g0275291 25.175 286 178 9 1 259 84 360 4.07e-18 83.6
Msa0355670 MtrunA17_Chr1g0159981 26.829 287 172 9 1 258 97 374 5.23e-18 83.2
Msa0355670 MtrunA17_Chr6g0450721 24.549 277 177 7 1 260 84 345 7.10e-18 82.4
Msa0355670 MtrunA17_Chr2g0283481 27.465 284 170 11 1 260 103 374 1.76e-17 81.6
Msa0355670 MtrunA17_Chr1g0160011 27.018 285 172 11 1 258 91 366 2.00e-17 81.6
Msa0355670 MtrunA17_Chr6g0469521 34.351 131 83 2 113 240 22 152 6.14e-17 76.3
Msa0355670 MtrunA17_Chr7g0273101 25.461 271 162 10 20 259 98 359 1.20e-16 79.3
Msa0355670 MtrunA17_Chr8g0347751 24.483 290 179 11 1 259 87 367 1.91e-16 78.6
Msa0355670 MtrunA17_Chr7g0226941 26.042 288 176 9 1 259 84 363 2.53e-16 78.2
Msa0355670 MtrunA17_Chr6g0450711 26.224 286 174 9 1 260 173 447 9.70e-16 77.0
Msa0355670 MtrunA17_Chr4g0057991 25.000 284 171 10 1 260 96 361 1.49e-15 75.9
Msa0355670 MtrunA17_Chr1g0159971 25.172 290 173 9 1 258 98 375 1.69e-15 75.9
Msa0355670 MtrunA17_Chr1g0159991 24.211 285 182 9 1 258 87 364 7.02e-15 73.9
Msa0355670 MtrunA17_Chr2g0283501 24.615 260 173 7 20 260 104 359 1.02e-14 73.6
Msa0355670 MtrunA17_Chr6g0450701 25.352 284 177 11 1 259 90 363 1.72e-14 72.8
Msa0355670 MtrunA17_Chr8g0352901 26.364 220 139 4 57 259 144 357 2.00e-14 72.8
Msa0355670 MtrunA17_Chr3g0104821 25.965 285 174 12 2 260 99 372 2.16e-14 72.8
Msa0355670 MtrunA17_Chr7g0228261 41.538 65 38 0 196 260 11 75 4.61e-14 66.6
Msa0355670 MtrunA17_Chr2g0283531 27.338 278 174 11 2 259 88 357 7.48e-14 70.9
Msa0355670 MtrunA17_Chr2g0283511 26.335 281 173 11 3 260 91 360 1.29e-13 70.5
Msa0355670 MtrunA17_Chr2g0301571 25.448 279 168 10 2 260 43 301 1.36e-13 69.7
Msa0355670 MtrunA17_Chr2g0301551 26.071 280 165 11 2 260 43 301 2.28e-13 69.3
Msa0355670 MtrunA17_Chr2g0301581 26.071 280 165 11 2 260 87 345 2.87e-13 69.3
Msa0355670 MtrunA17_Chr2g0317271 25.090 279 170 10 2 260 84 343 3.21e-13 68.9
Msa0355670 MtrunA17_Chr0c01g0489581 25.090 279 170 10 2 260 84 343 5.00e-13 68.6
Msa0355670 MtrunA17_Chr0c01g0489571 25.090 279 170 10 2 260 84 343 6.56e-13 68.2
Msa0355670 MtrunA17_Chr1g0198351 23.887 247 160 8 13 247 102 332 1.58e-12 67.0
Msa0355670 MtrunA17_Chr3g0104831 25.725 276 169 12 10 260 27 291 2.71e-12 65.9
Msa0355670 MtrunA17_Chr2g0308211 33.871 124 78 2 1 122 24 145 2.83e-12 63.2
Msa0355670 MtrunA17_Chr2g0283541 25.692 253 159 9 31 259 36 283 3.24e-12 65.9
Msa0355670 MtrunA17_Chr2g0317261 25.271 277 172 10 2 260 84 343 4.68e-12 65.5
Msa0355670 MtrunA17_Chr2g0301541 25.357 280 167 11 2 260 87 345 1.15e-11 64.3
Msa0355670 MtrunA17_Chr3g0112821 26.159 302 179 12 2 283 85 362 2.94e-11 63.2
Msa0355670 MtrunA17_Chr4g0027581 28.571 147 80 5 138 259 41 187 3.10e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0355670 AT1G74460.1 75.347 288 69 1 1 286 79 366 3.32e-166 465
Msa0355670 AT5G37690.2 45.736 258 138 2 1 258 75 330 2.26e-82 252
Msa0355670 AT5G37690.1 45.736 258 138 2 1 258 83 338 3.11e-82 252
Msa0355670 AT5G15720.3 39.179 268 154 5 1 261 52 317 1.46e-61 198
Msa0355670 AT1G71250.1 37.891 256 155 3 3 255 97 351 5.81e-61 197
Msa0355670 AT5G15720.1 39.179 268 154 5 1 261 83 348 6.58e-61 197
Msa0355670 AT3G50400.1 39.922 258 147 6 9 259 100 356 9.86e-60 194
Msa0355670 AT1G71691.1 37.597 258 157 3 1 257 8 262 1.84e-59 191
Msa0355670 AT1G71691.2 37.597 258 157 3 1 257 109 363 3.67e-58 191
Msa0355670 AT2G23540.1 38.521 257 151 5 9 259 114 369 3.96e-58 191
Msa0355670 AT5G08460.1 37.931 261 155 4 1 255 104 363 5.69e-57 187
Msa0355670 AT1G33811.1 38.843 242 139 5 23 255 108 349 5.62e-54 179
Msa0355670 AT1G29660.1 37.549 253 151 5 7 255 92 341 1.21e-50 171
Msa0355670 AT5G45670.1 34.979 243 154 3 23 261 103 345 7.99e-50 169
Msa0355670 AT5G41890.1 34.572 269 156 8 6 259 94 357 1.05e-49 169
Msa0355670 AT1G29670.1 36.441 236 147 3 23 255 105 340 1.32e-49 168
Msa0355670 AT4G28780.1 34.387 253 163 2 9 259 94 345 2.34e-49 167
Msa0355670 AT1G29670.2 36.441 236 147 3 23 255 173 408 8.25e-49 167
Msa0355670 AT5G33370.1 32.061 262 175 3 1 260 85 345 3.10e-48 164
Msa0355670 AT4G18970.1 32.800 250 162 4 16 261 97 344 1.59e-47 162
Msa0355670 AT2G04570.1 34.601 263 165 6 1 259 83 342 7.98e-47 160
Msa0355670 AT4G18970.2 32.800 250 162 4 16 261 97 344 1.00e-46 162
Msa0355670 AT3G04290.1 32.950 261 172 3 1 259 84 343 1.07e-46 160
Msa0355670 AT4G10950.1 31.128 257 174 2 1 255 122 377 1.15e-46 161
Msa0355670 AT5G18430.1 32.685 257 169 3 6 259 89 344 1.24e-46 160
Msa0355670 AT4G10950.2 31.128 257 174 2 1 255 126 381 1.40e-46 161
Msa0355670 AT5G42170.1 33.712 264 166 5 7 267 112 369 7.98e-46 158
Msa0355670 AT4G26790.1 33.333 258 164 6 7 260 91 344 1.72e-45 157
Msa0355670 AT4G26790.2 33.333 258 164 6 7 260 91 344 1.72e-45 157
Msa0355670 AT2G42990.1 32.443 262 171 5 4 262 87 345 8.80e-45 155
Msa0355670 AT5G45950.1 33.716 261 164 6 1 259 95 348 1.08e-43 152
Msa0355670 AT1G20120.1 31.298 262 170 6 4 260 137 393 4.48e-40 144
Msa0355670 AT5G55050.1 33.195 241 153 6 23 259 122 358 6.90e-40 143
Msa0355670 AT5G15720.2 38.208 212 122 5 1 205 83 292 1.54e-39 140
Msa0355670 AT3G14820.1 35.769 260 155 8 7 262 94 345 1.92e-39 141
Msa0355670 AT1G75890.2 31.298 262 174 5 4 262 107 365 5.45e-39 140
Msa0355670 AT1G75890.3 31.298 262 174 5 4 262 136 394 8.83e-39 140
Msa0355670 AT1G75890.1 30.657 274 173 7 4 262 107 378 4.38e-38 138
Msa0355670 AT1G75900.1 31.274 259 171 5 7 262 105 359 5.71e-38 137
Msa0355670 AT2G30220.1 32.540 252 155 6 7 250 96 340 9.80e-38 137
Msa0355670 AT1G71691.3 36.893 206 126 3 1 205 109 311 1.10e-37 135
Msa0355670 AT1G59406.1 30.337 267 174 7 1 262 85 344 1.10e-37 136
Msa0355670 AT1G59030.1 30.337 267 174 7 1 262 85 344 1.10e-37 136
Msa0355670 AT1G58725.1 30.337 267 174 7 1 262 85 344 1.10e-37 136
Msa0355670 AT1G75880.1 30.153 262 178 4 4 262 111 370 4.62e-37 135
Msa0355670 AT1G58430.1 31.203 266 162 5 7 261 98 353 1.85e-36 133
Msa0355670 AT3G16370.1 32.432 259 166 7 6 259 91 345 7.04e-36 132
Msa0355670 AT1G75880.2 30.153 262 177 5 4 262 111 369 2.35e-35 130
Msa0355670 AT2G30310.1 30.040 253 170 5 7 255 97 346 4.95e-35 129
Msa0355670 AT2G31540.1 30.469 256 171 5 7 258 98 350 7.03e-35 129
Msa0355670 AT3G53100.1 32.308 260 168 6 6 261 90 345 9.59e-35 129
Msa0355670 AT1G06990.1 29.119 261 176 5 7 262 99 355 2.37e-34 128
Msa0355670 AT2G40250.1 29.520 271 178 5 1 262 91 357 5.97e-34 127
Msa0355670 AT5G03810.1 30.268 261 173 7 6 261 91 347 1.14e-33 126
Msa0355670 AT3G14225.2 30.224 268 168 7 3 259 95 354 1.51e-33 126
Msa0355670 AT3G14225.1 30.741 270 168 7 3 259 95 358 1.89e-33 125
Msa0355670 AT2G24560.1 30.488 246 164 5 7 248 97 339 2.02e-33 125
Msa0355670 AT5G22810.1 32.389 247 151 7 23 259 111 351 2.04e-33 125
Msa0355670 AT5G45960.1 31.496 254 158 7 7 250 109 356 2.39e-33 125
Msa0355670 AT2G19060.1 30.864 243 144 10 21 254 102 329 1.23e-32 123
Msa0355670 AT4G16230.1 41.875 160 88 3 7 162 90 248 2.58e-32 120
Msa0355670 AT1G58520.3 29.478 268 168 9 1 262 85 337 6.70e-32 121
Msa0355670 AT1G58525.1 29.478 268 168 9 1 262 85 337 6.70e-32 121
Msa0355670 AT2G19010.1 31.535 241 145 9 21 255 102 328 9.97e-32 120
Msa0355670 AT2G19010.2 31.535 241 145 9 21 255 132 358 2.25e-31 120
Msa0355670 AT5G40990.1 29.851 268 169 7 3 259 95 354 2.70e-31 120
Msa0355670 AT1G20130.2 29.851 268 171 8 7 262 246 508 2.87e-31 122
Msa0355670 AT2G19050.1 31.950 241 140 9 23 255 105 329 3.27e-31 119
Msa0355670 AT1G20130.1 29.851 268 171 8 7 262 266 528 4.59e-31 121
Msa0355670 AT1G20132.1 28.571 266 176 7 4 262 120 378 6.70e-31 119
Msa0355670 AT5G33370.2 30.918 207 140 3 1 205 85 290 1.01e-30 117
Msa0355670 AT2G31550.1 29.524 210 143 3 53 258 1 209 1.96e-30 114
Msa0355670 AT3G43570.1 27.273 264 157 6 1 262 85 315 2.01e-30 116
Msa0355670 AT1G73610.1 30.943 265 158 8 7 265 97 342 2.07e-30 117
Msa0355670 AT1G23500.1 33.948 271 143 11 7 266 97 342 2.41e-30 117
Msa0355670 AT1G53990.1 29.851 268 169 7 3 259 86 345 2.49e-30 117
Msa0355670 AT5G03820.1 30.488 246 162 6 20 259 107 349 5.34e-30 116
Msa0355670 AT5G03820.2 30.488 246 162 6 20 259 135 377 1.22e-29 115
Msa0355670 AT1G20135.1 31.600 250 155 7 7 254 91 326 1.81e-29 114
Msa0355670 AT1G71120.1 27.925 265 173 8 1 258 86 339 2.81e-29 114
Msa0355670 AT2G03980.2 30.153 262 166 7 2 255 99 351 4.04e-29 114
Msa0355670 AT2G03980.3 30.153 262 166 7 2 255 99 351 4.04e-29 114
Msa0355670 AT2G03980.1 30.153 262 166 7 2 255 99 351 4.04e-29 114
Msa0355670 AT2G03980.4 30.153 262 166 7 2 255 99 351 4.04e-29 114
Msa0355670 AT5G63170.1 31.579 247 151 8 7 250 90 321 6.61e-29 113
Msa0355670 AT1G53920.1 27.381 252 165 6 3 245 106 348 1.12e-28 113
Msa0355670 AT1G53940.2 27.612 268 175 7 3 259 97 356 9.52e-28 110
Msa0355670 AT4G30140.1 28.794 257 159 10 4 255 92 329 1.10e-25 104
Msa0355670 AT1G75920.4 28.000 250 155 6 20 260 75 308 3.87e-25 102
Msa0355670 AT1G75920.2 28.000 250 155 6 20 260 103 336 1.91e-24 101
Msa0355670 AT1G75920.1 28.000 250 155 6 20 260 113 346 2.81e-24 100
Msa0355670 AT4G16233.1 40.187 107 63 1 154 259 6 112 9.09e-24 94.4
Msa0355670 AT1G75910.1 27.347 245 164 4 20 260 102 336 3.63e-23 97.4
Msa0355670 AT2G19050.2 34.503 171 104 5 23 191 105 269 9.84e-23 95.5
Msa0355670 AT2G24560.2 29.954 217 143 6 7 219 97 308 8.92e-22 93.2
Msa0355670 AT3G43550.1 28.713 202 134 5 7 205 92 286 3.16e-21 91.3
Msa0355670 AT1G75930.1 29.921 254 150 9 15 259 101 335 4.21e-21 92.0
Msa0355670 AT1G75920.3 26.667 240 152 5 30 260 81 305 5.64e-21 90.9
Msa0355670 AT3G62280.1 26.459 257 162 6 20 259 104 350 1.47e-20 90.5
Msa0355670 AT5G14450.1 26.429 280 177 8 1 255 92 367 1.04e-18 85.5
Msa0355670 AT1G09390.1 25.606 289 179 11 8 277 92 363 1.79e-18 84.7
Msa0355670 AT3G05180.1 27.350 234 135 6 49 259 145 366 1.93e-18 84.7
Msa0355670 AT1G54020.1 24.031 258 176 7 1 255 1 241 4.86e-18 82.4
Msa0355670 AT1G54020.5 24.031 258 176 7 1 255 1 241 4.86e-18 82.4
Msa0355670 AT1G54020.3 24.031 258 176 7 1 255 1 241 4.86e-18 82.4
Msa0355670 AT1G56670.1 23.438 256 172 8 20 259 109 356 9.23e-18 82.8
Msa0355670 AT1G54020.2 24.031 258 176 7 1 255 87 327 1.29e-17 82.4
Msa0355670 AT1G54030.1 24.314 255 166 9 1 251 106 337 1.29e-17 82.8
Msa0355670 AT1G54000.1 23.372 261 178 8 7 259 93 339 4.90e-17 80.9
Msa0355670 AT1G54010.1 23.864 264 177 10 5 259 91 339 5.45e-17 80.5
Msa0355670 AT1G53940.1 25.962 208 142 5 3 205 97 297 2.83e-16 77.8
Msa0355670 AT4G01130.3 23.675 283 178 9 9 259 3 279 4.90e-16 77.0
Msa0355670 AT4G01130.1 23.711 291 180 10 1 259 85 365 6.46e-16 77.4
Msa0355670 AT1G54020.4 27.451 153 108 2 106 255 40 192 7.23e-16 75.5
Msa0355670 AT1G54790.3 25.676 296 166 14 1 259 84 362 7.28e-16 77.4
Msa0355670 AT1G54790.1 25.676 296 166 14 1 259 83 361 8.76e-16 77.0
Msa0355670 AT3G14210.1 26.236 263 168 10 6 258 94 340 2.20e-15 75.9
Msa0355670 AT3G27950.1 24.242 264 167 7 21 259 100 355 1.49e-14 73.6
Msa0355670 AT1G67830.1 24.042 287 175 9 1 254 81 357 2.02e-14 73.2
Msa0355670 AT3G48460.1 25.000 276 173 10 1 255 95 357 3.10e-14 72.4
Msa0355670 AT3G14210.2 26.887 212 140 8 58 258 5 212 5.45e-14 70.9
Msa0355670 AT1G28580.2 26.408 284 173 11 1 260 13 284 1.61e-13 70.1
Msa0355670 AT1G28580.1 26.408 284 173 11 1 260 94 365 1.64e-13 70.5
Msa0355670 AT2G04020.2 27.519 258 126 9 3 251 100 305 1.87e-13 69.7
Msa0355670 AT5G03610.1 21.839 261 178 6 1 250 95 340 7.57e-13 68.6
Msa0355670 AT2G04020.1 31.469 143 89 3 3 143 100 235 1.12e-11 63.9
Msa0355670 AT1G28570.1 24.382 283 180 11 1 260 91 362 1.23e-11 65.1
Msa0355670 AT1G54790.2 23.602 322 166 15 1 259 83 387 6.86e-11 62.8

Find 76 sgRNAs with CRISPR-Local

Find 126 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTAGGCCTCCAGCATTTC+TGG 0.064442 3_1:-30472919 Msa0355670:CDS
ATAGAAGCAAGTACGTATTT+TGG 0.172975 3_1:-30470495 Msa0355670:CDS
AGCTCTTTGGCTTTGTAATT+TGG 0.173651 3_1:-30470260 Msa0355670:three_prime_UTR
TACATGTTTAGGTGACAATA+TGG 0.234845 3_1:-30472946 Msa0355670:exon
AGTAAGGTAGTAAATGATTT+GGG 0.238873 3_1:-30471330 Msa0355670:CDS
GTCTTTGGGCTGGGCCCAAT+GGG 0.246354 3_1:-30471441 Msa0355670:CDS
CCATTACAATAGAAATTTAA+TGG 0.254852 3_1:+30470293 None:intergenic
GAACTAATTAGAAGCAAAAT+TGG 0.258541 3_1:-30472404 Msa0355670:CDS
GACTCACCATGTTGCTCATT+TGG 0.279634 3_1:-30470568 Msa0355670:CDS
GGTCTTTGGGCTGGGCCCAA+TGG 0.280375 3_1:-30471442 Msa0355670:CDS
GCAAGGCAACTGATGGTCTT+TGG 0.290566 3_1:-30471456 Msa0355670:CDS
TTTAAGTGAAGATGTTATAT+TGG 0.296957 3_1:-30472889 Msa0355670:CDS
ACTGAACTCATCAAGAAGTT+TGG 0.302955 3_1:-30470430 Msa0355670:CDS
GCACGTTATGTTGTTGCTTT+AGG 0.308496 3_1:-30472350 Msa0355670:CDS
CAAAGAGTCCTTAGTACATC+TGG 0.308692 3_1:-30471405 Msa0355670:CDS
GAAGATGTTATATTGGAAAA+TGG 0.314449 3_1:-30472882 Msa0355670:CDS
TGCCTCTTTATAGTGATTCA+TGG 0.314992 3_1:-30472298 Msa0355670:CDS
CTGAACTCATCAAGAAGTTT+GGG 0.326694 3_1:-30470429 Msa0355670:CDS
AACATGGTGAGTCTGCATTT+TGG 0.327231 3_1:+30470578 None:intergenic
CAAGGCAACTGATGGTCTTT+GGG 0.329225 3_1:-30471455 Msa0355670:CDS
ATTAGCAACCCCAGCAAGTA+TGG 0.336548 3_1:-30471246 Msa0355670:intron
CTCTTATTATTTACATGTTT+AGG 0.341522 3_1:-30472957 None:intergenic
GCAACTGATGGTCTTTGGGC+TGG 0.343547 3_1:-30471451 Msa0355670:CDS
CCATTAAATTTCTATTGTAA+TGG 0.345373 3_1:-30470293 Msa0355670:three_prime_UTR
TGGAAACAAGTATAGCTCTT+TGG 0.346127 3_1:-30470273 Msa0355670:three_prime_UTR
AATGGAGTAAACTATGCTTC+TGG 0.349079 3_1:-30472864 Msa0355670:CDS
AAGTAAGGTAGTAAATGATT+TGG 0.374233 3_1:-30471331 Msa0355670:CDS
CCAAATCTGTAGCTTGCATT+TGG 0.374809 3_1:+30471297 None:intergenic
CAACTGATGGTCTTTGGGCT+GGG 0.375703 3_1:-30471450 Msa0355670:CDS
ACTCACCATGTTGCTCATTT+GGG 0.381809 3_1:-30470567 Msa0355670:CDS
CCAAATGCAAGCTACAGATT+TGG 0.382063 3_1:-30471297 Msa0355670:CDS
ACCTTCATTGATTACTTAGT+AGG 0.385384 3_1:-30472260 Msa0355670:CDS
AAACAAATTGAGCTGTTTCA+AGG 0.396976 3_1:-30472434 Msa0355670:CDS
ACATGTTTAGGTGACAATAT+GGG 0.408796 3_1:-30472945 Msa0355670:exon
GAAGGGGAATGCAGCCCATT+GGG 0.429532 3_1:+30471427 None:intergenic
GTGACAATATGGGGCTTCCT+AGG 0.453449 3_1:-30472935 Msa0355670:exon
TCCAGAAATGCTGGAGGCCT+AGG 0.461614 3_1:+30472918 None:intergenic
CTTTAACAAAGCTTCAAGTA+AGG 0.467887 3_1:-30471346 Msa0355670:CDS
ATGTACTAAGGACTCTTTGA+AGG 0.476349 3_1:+30471409 None:intergenic
ATAACATCTTCACTTAAAGA+TGG 0.482637 3_1:+30472894 None:intergenic
AGTTCATTAGCTTTGTCTGA+TGG 0.485030 3_1:+30470460 None:intergenic
AACAAATTGAGCTGTTTCAA+GGG 0.487213 3_1:-30472433 Msa0355670:CDS
TGAAGGGGAATGCAGCCCAT+TGG 0.497511 3_1:+30471426 None:intergenic
AACTATGCTTCTGGAGGTGG+TGG 0.499056 3_1:-30472855 Msa0355670:CDS
GACAATTCCCAGATGTACTA+AGG 0.500454 3_1:+30471397 None:intergenic
GGTGGCATATTGAATGAAAC+TGG 0.503719 3_1:-30472837 Msa0355670:CDS
GAAGGAGATGGAGCAACCTC+TGG 0.504019 3_1:+30470367 None:intergenic
GTAAACTATGCTTCTGGAGG+TGG 0.504846 3_1:-30472858 Msa0355670:CDS
TCCTACTAAGTAATCAATGA+AGG 0.504930 3_1:+30472259 None:intergenic
GTCCATGAATCACTATAAAG+AGG 0.514127 3_1:+30472296 None:intergenic
AACACTTCAAGAACAACTAA+AGG 0.521281 3_1:-30472237 Msa0355670:intron
AAAGATGGGTCCAGAAATGC+TGG 0.521979 3_1:+30472909 None:intergenic
CATGTTTAGGTGACAATATG+GGG 0.525761 3_1:-30472944 Msa0355670:exon
CACCATGTTGCTCATTTGGG+AGG 0.534108 3_1:-30470564 Msa0355670:CDS
CCATCAGTTGCCTTGCACCT+AGG 0.534483 3_1:+30471463 None:intergenic
TTGTATAATTAATCATCTGA+AGG 0.547376 3_1:+30470349 None:intergenic
TCTTTGCATAATGTTGATGC+TGG 0.549316 3_1:+30470517 None:intergenic
TAACATCTTCACTTAAAGAT+GGG 0.549902 3_1:+30472895 None:intergenic
AAAGAGTCCTTAGTACATCT+GGG 0.564543 3_1:-30471404 Msa0355670:CDS
AATTAATCATCTGAAGGAGA+TGG 0.573103 3_1:+30470355 None:intergenic
CCTAGGTGCAAGGCAACTGA+TGG 0.574850 3_1:-30471463 Msa0355670:CDS
TGTACTAAGGACTCTTTGAA+GGG 0.590352 3_1:+30471410 None:intergenic
TACTGCATAGCCTAGGTGCA+AGG 0.598919 3_1:-30471473 Msa0355670:CDS
TTTACTTACCATACTTGCTG+GGG 0.611867 3_1:+30471238 None:intergenic
GTTTAGGTACTGCATAGCCT+AGG 0.623583 3_1:-30471480 Msa0355670:intron
GCAACCTCTGGTGATGGTGA+AGG 0.624396 3_1:+30470379 None:intergenic
GTAAGGTAGTAAATGATTTG+GGG 0.641724 3_1:-30471329 Msa0355670:CDS
AAACTTCTTGATGAGTTCAG+TGG 0.642304 3_1:+30470432 None:intergenic
GCTGGTATACATGTAAGAGC+TGG 0.647675 3_1:+30470535 None:intergenic
GGAGTAAACTATGCTTCTGG+AGG 0.648773 3_1:-30472861 Msa0355670:CDS
GATGGAGCAACCTCTGGTGA+TGG 0.650771 3_1:+30470373 None:intergenic
AACTCCTTCACCATCACCAG+AGG 0.652672 3_1:-30470383 Msa0355670:CDS
GTACTAAGGACTCTTTGAAG+GGG 0.664714 3_1:+30471411 None:intergenic
ATTTGGAGATGCTTATGATG+TGG 0.679980 3_1:-30471280 Msa0355670:CDS
ATCCTCCCAAATGAGCAACA+TGG 0.688236 3_1:+30470562 None:intergenic
GATGGGTCCAGAAATGCTGG+AGG 0.718465 3_1:+30472912 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTTCTCTATAAAAAATAT+TGG - chr3_1:30471099-30471118 Msa0355670:intron 15.0%
!!! AAATTATTAATTTGTTGTGA+AGG - chr3_1:30471122-30471141 Msa0355670:intron 15.0%
!!! TGTAATAATATTTTCAATGT+AGG - chr3_1:30472581-30472600 Msa0355670:intron 15.0%
!!! GTAATAATATTTTCAATGTA+GGG - chr3_1:30472582-30472601 Msa0355670:intron 15.0%
!! TTTAAGTGAAGATGTTATAT+TGG - chr3_1:30470296-30470315 Msa0355670:three_prime_UTR 20.0%
!!! AGTTATTTTGTAAGATTACA+AGG - chr3_1:30470372-30470391 Msa0355670:CDS 20.0%
!! CGTTGAAAATTGAAAAATTA+TGG - chr3_1:30470507-30470526 Msa0355670:CDS 20.0%
!! TCAATCTATGATGAAAATTA+TGG + chr3_1:30470554-30470573 None:intergenic 20.0%
!!! TTTATGCTATTTGACATTTA+TGG - chr3_1:30470637-30470656 Msa0355670:intron 20.0%
!!! AGTTTAAATCTCTTTAAAAC+TGG + chr3_1:30471369-30471388 None:intergenic 20.0%
!! TGAAAATCCTAACAAATAAA+GGG + chr3_1:30471498-30471517 None:intergenic 20.0%
!! TTGAAAATCCTAACAAATAA+AGG + chr3_1:30471499-30471518 None:intergenic 20.0%
!!! TTCCATTCAACATTTTTTAT+AGG + chr3_1:30471595-30471614 None:intergenic 20.0%
!!! ATCATGCTTTTAAAATGTTT+AGG - chr3_1:30471689-30471708 Msa0355670:intron 20.0%
!!! ACTTAAATTTGTTTTTAGAG+TGG + chr3_1:30472203-30472222 None:intergenic 20.0%
!!! CAATTTGTATGCAATTTTTT+AGG - chr3_1:30472268-30472287 Msa0355670:CDS 20.0%
!! TTGTATAATTAATCATCTGA+AGG + chr3_1:30472839-30472858 None:intergenic 20.0%
!! CCATTACAATAGAAATTTAA+TGG + chr3_1:30472895-30472914 None:intergenic 20.0%
!! CCATTAAATTTCTATTGTAA+TGG - chr3_1:30472892-30472911 Msa0355670:CDS 20.0%
! TAACATCTTCACTTAAAGAT+GGG + chr3_1:30470293-30470312 None:intergenic 25.0%
! ATAACATCTTCACTTAAAGA+TGG + chr3_1:30470294-30470313 None:intergenic 25.0%
! GAAGATGTTATATTGGAAAA+TGG - chr3_1:30470303-30470322 Msa0355670:three_prime_UTR 25.0%
! TCTGTTCGTATTCAAAATTA+TGG - chr3_1:30470450-30470469 Msa0355670:CDS 25.0%
! TTAATCACATTCAAAACATG+TGG + chr3_1:30470603-30470622 None:intergenic 25.0%
! TAATAATCAGTGACTTTCTT+TGG + chr3_1:30470674-30470693 None:intergenic 25.0%
! GAACTAATTAGAAGCAAAAT+TGG - chr3_1:30470781-30470800 Msa0355670:intron 25.0%
! TCATTTCTTTGTGTTTCATT+TGG - chr3_1:30471001-30471020 Msa0355670:intron 25.0%
! CATTTCTTTGTGTTTCATTT+GGG - chr3_1:30471002-30471021 Msa0355670:intron 25.0%
!!! TTATTAATTTGTTGTGAAGG+AGG - chr3_1:30471125-30471144 Msa0355670:intron 25.0%
!!! CAATGTAAAATTGCTACTTT+TGG - chr3_1:30471308-30471327 Msa0355670:CDS 25.0%
! TACTGTTGAGAATTTAAATC+CGG - chr3_1:30471419-30471438 Msa0355670:CDS 25.0%
! TCAAATTCAGTCATGTAAAA+AGG - chr3_1:30471515-30471534 Msa0355670:intron 25.0%
!! TTGATTCAGAGTTTAAAATC+CGG + chr3_1:30471566-30471585 None:intergenic 25.0%
! AGCCTATAAAAAATGTTGAA+TGG - chr3_1:30471590-30471609 Msa0355670:intron 25.0%
!!! AGGAAGAAATAGTCTTATTT+AGG - chr3_1:30471647-30471666 Msa0355670:intron 25.0%
!!! GGAAGAAATAGTCTTATTTA+GGG - chr3_1:30471648-30471667 Msa0355670:intron 25.0%
! AAGTAAGGTAGTAAATGATT+TGG - chr3_1:30471854-30471873 Msa0355670:intron 25.0%
! AGTAAGGTAGTAAATGATTT+GGG - chr3_1:30471855-30471874 Msa0355670:intron 25.0%
!!! TATTTCGTTTTTGTTTTCAG+AGG - chr3_1:30472034-30472053 Msa0355670:intron 25.0%
!! AAAAAACATACAAAGTGTTC+TGG + chr3_1:30472111-30472130 None:intergenic 25.0%
!!! TTTTTTCTCACAATATCAGA+AGG - chr3_1:30472307-30472326 Msa0355670:CDS 25.0%
! GAATCCATAAACTCTTAAAA+TGG - chr3_1:30472410-30472429 Msa0355670:CDS 25.0%
!!! TCATCCATTTTAAGAGTTTA+TGG + chr3_1:30472417-30472436 None:intergenic 25.0%
!! TACAATGAAAATCGTTTTCA+CGG + chr3_1:30472565-30472584 None:intergenic 25.0%
CGAACAGATATAACATATGT+AGG + chr3_1:30470438-30470457 None:intergenic 30.0%
AAAATCTTTGAATCTGCACA+AGG + chr3_1:30470723-30470742 None:intergenic 30.0%
! AAACAAATTGAGCTGTTTCA+AGG - chr3_1:30470751-30470770 Msa0355670:intron 30.0%
! AACAAATTGAGCTGTTTCAA+GGG - chr3_1:30470752-30470771 Msa0355670:intron 30.0%
! ACCTTCATTGATTACTTAGT+AGG - chr3_1:30470925-30470944 Msa0355670:intron 30.0%
TCCTACTAAGTAATCAATGA+AGG + chr3_1:30470929-30470948 None:intergenic 30.0%
AACACTTCAAGAACAACTAA+AGG - chr3_1:30470948-30470967 Msa0355670:intron 30.0%
GAAATTCACATTAACTGAAC+CGG + chr3_1:30471441-30471460 None:intergenic 30.0%
!! TTTTGACTCTGAGAAATATG+CGG + chr3_1:30471474-30471493 None:intergenic 30.0%
! TCAAAAGCCCTTTATTTGTT+AGG - chr3_1:30471488-30471507 Msa0355670:intron 30.0%
!!! TTGCAGATTTTTTACATGTC+CGG - chr3_1:30471544-30471563 Msa0355670:intron 30.0%
CTTTAACAAAGCTTCAAGTA+AGG - chr3_1:30471839-30471858 Msa0355670:intron 30.0%
GTAAGGTAGTAAATGATTTG+GGG - chr3_1:30471856-30471875 Msa0355670:intron 30.0%
! TTTTACTTACCATACTTGCT+GGG + chr3_1:30471951-30471970 None:intergenic 30.0%
! ATTTTACTTACCATACTTGC+TGG + chr3_1:30471952-30471971 None:intergenic 30.0%
! GTAACATTTTCATAACATCG+AGG + chr3_1:30472536-30472555 None:intergenic 30.0%
! ACAATGAAAATCGTTTTCAC+GGG + chr3_1:30472564-30472583 None:intergenic 30.0%
! ATAGAAGCAAGTACGTATTT+TGG - chr3_1:30472690-30472709 Msa0355670:intron 30.0%
! TAGAAGCAAGTACGTATTTT+GGG - chr3_1:30472691-30472710 Msa0355670:intron 30.0%
AATTAATCATCTGAAGGAGA+TGG + chr3_1:30472833-30472852 None:intergenic 30.0%
AATGGAGTAAACTATGCTTC+TGG - chr3_1:30470321-30470340 Msa0355670:three_prime_UTR 35.0%
!!! TGAAGCAGAGAAGTTTTTTC+TGG - chr3_1:30470810-30470829 Msa0355670:intron 35.0%
TGCCTCTTTATAGTGATTCA+TGG - chr3_1:30470887-30470906 Msa0355670:intron 35.0%
GTCCATGAATCACTATAAAG+AGG + chr3_1:30470892-30470911 None:intergenic 35.0%
! TTTGACTCTGAGAAATATGC+GGG + chr3_1:30471473-30471492 None:intergenic 35.0%
TGTACTAAGGACTCTTTGAA+GGG + chr3_1:30471778-30471797 None:intergenic 35.0%
ATGTACTAAGGACTCTTTGA+AGG + chr3_1:30471779-30471798 None:intergenic 35.0%
AAAGAGTCCTTAGTACATCT+GGG - chr3_1:30471781-30471800 Msa0355670:intron 35.0%
ATTTGGAGATGCTTATGATG+TGG - chr3_1:30471905-30471924 Msa0355670:intron 35.0%
! TTTACTTACCATACTTGCTG+GGG + chr3_1:30471950-30471969 None:intergenic 35.0%
TCTTTGCATAATGTTGATGC+TGG + chr3_1:30472671-30472690 None:intergenic 35.0%
!! AGTTCATTAGCTTTGTCTGA+TGG + chr3_1:30472728-30472747 None:intergenic 35.0%
AAACTTCTTGATGAGTTCAG+TGG + chr3_1:30472756-30472775 None:intergenic 35.0%
ACTGAACTCATCAAGAAGTT+TGG - chr3_1:30472755-30472774 Msa0355670:intron 35.0%
CTGAACTCATCAAGAAGTTT+GGG - chr3_1:30472756-30472775 Msa0355670:intron 35.0%
TGGAAACAAGTATAGCTCTT+TGG - chr3_1:30472912-30472931 Msa0355670:CDS 35.0%
!! AGCTCTTTGGCTTTGTAATT+TGG - chr3_1:30472925-30472944 Msa0355670:CDS 35.0%
GGTGGCATATTGAATGAAAC+TGG - chr3_1:30470348-30470367 Msa0355670:exon 40.0%
!! GCACGTTATGTTGTTGCTTT+AGG - chr3_1:30470835-30470854 Msa0355670:intron 40.0%
! TTGACTCTGAGAAATATGCG+GGG + chr3_1:30471472-30471491 None:intergenic 40.0%
! GTACTAAGGACTCTTTGAAG+GGG + chr3_1:30471777-30471796 None:intergenic 40.0%
CAAAGAGTCCTTAGTACATC+TGG - chr3_1:30471780-30471799 Msa0355670:intron 40.0%
GACAATTCCCAGATGTACTA+AGG + chr3_1:30471791-30471810 None:intergenic 40.0%
! CCAAATCTGTAGCTTGCATT+TGG + chr3_1:30471891-30471910 None:intergenic 40.0%
CCAAATGCAAGCTACAGATT+TGG - chr3_1:30471888-30471907 Msa0355670:intron 40.0%
! AAAATCGTTTTCACGGGACA+AGG + chr3_1:30472558-30472577 None:intergenic 40.0%
! AACATGGTGAGTCTGCATTT+TGG + chr3_1:30472610-30472629 None:intergenic 40.0%
ACTCACCATGTTGCTCATTT+GGG - chr3_1:30472618-30472637 Msa0355670:intron 40.0%
AAAGATGGGTCCAGAAATGC+TGG + chr3_1:30470279-30470298 None:intergenic 45.0%
GGAGTAAACTATGCTTCTGG+AGG - chr3_1:30470324-30470343 Msa0355670:three_prime_UTR 45.0%
! GTAAACTATGCTTCTGGAGG+TGG - chr3_1:30470327-30470346 Msa0355670:three_prime_UTR 45.0%
! GTTTAGGTACTGCATAGCCT+AGG - chr3_1:30471705-30471724 Msa0355670:intron 45.0%
CAAGGCAACTGATGGTCTTT+GGG - chr3_1:30471730-30471749 Msa0355670:intron 45.0%
ATTAGCAACCCCAGCAAGTA+TGG - chr3_1:30471939-30471958 Msa0355670:intron 45.0%
GACTCACCATGTTGCTCATT+TGG - chr3_1:30472617-30472636 Msa0355670:intron 45.0%
ATCCTCCCAAATGAGCAACA+TGG + chr3_1:30472626-30472645 None:intergenic 45.0%
GCTGGTATACATGTAAGAGC+TGG + chr3_1:30472653-30472672 None:intergenic 45.0%
!! CTTAAAAAAAAAAAAAAAAA+AGG + chr3_1:30471629-30471648 None:intergenic 5.0%
!!! CTTTTTTTTTTTTTTTTTTA+AGG - chr3_1:30471627-30471646 Msa0355670:intron 5.0%
GTGACAATATGGGGCTTCCT+AGG - chr3_1:30470250-30470269 Msa0355670:three_prime_UTR 50.0%
! AACTATGCTTCTGGAGGTGG+TGG - chr3_1:30470330-30470349 Msa0355670:three_prime_UTR 50.0%
! ACTCTGAGAAATATGCGGGG+TGG + chr3_1:30471469-30471488 None:intergenic 50.0%
TACTGCATAGCCTAGGTGCA+AGG - chr3_1:30471712-30471731 Msa0355670:intron 50.0%
GCAAGGCAACTGATGGTCTT+TGG - chr3_1:30471729-30471748 Msa0355670:intron 50.0%
CAACTGATGGTCTTTGGGCT+GGG - chr3_1:30471735-30471754 Msa0355670:intron 50.0%
CACCATGTTGCTCATTTGGG+AGG - chr3_1:30472621-30472640 Msa0355670:intron 50.0%
AACTCCTTCACCATCACCAG+AGG - chr3_1:30472802-30472821 Msa0355670:intron 50.0%
TCCTAGGCCTCCAGCATTTC+TGG - chr3_1:30470266-30470285 Msa0355670:three_prime_UTR 55.0%
TCCAGAAATGCTGGAGGCCT+AGG + chr3_1:30470270-30470289 None:intergenic 55.0%
GATGGGTCCAGAAATGCTGG+AGG + chr3_1:30470276-30470295 None:intergenic 55.0%
CCATCAGTTGCCTTGCACCT+AGG + chr3_1:30471725-30471744 None:intergenic 55.0%
CCTAGGTGCAAGGCAACTGA+TGG - chr3_1:30471722-30471741 Msa0355670:intron 55.0%
GCAACTGATGGTCTTTGGGC+TGG - chr3_1:30471734-30471753 Msa0355670:intron 55.0%
GAAGGGGAATGCAGCCCATT+GGG + chr3_1:30471761-30471780 None:intergenic 55.0%
TGAAGGGGAATGCAGCCCAT+TGG + chr3_1:30471762-30471781 None:intergenic 55.0%
ACATCGAGGTCTAGCGCATG+TGG + chr3_1:30472522-30472541 None:intergenic 55.0%
!! GCAACCTCTGGTGATGGTGA+AGG + chr3_1:30472809-30472828 None:intergenic 55.0%
GATGGAGCAACCTCTGGTGA+TGG + chr3_1:30472815-30472834 None:intergenic 55.0%
GAAGGAGATGGAGCAACCTC+TGG + chr3_1:30472821-30472840 None:intergenic 55.0%
! GTCTTTGGGCTGGGCCCAAT+GGG - chr3_1:30471744-30471763 Msa0355670:intron 60.0%
CGAGGTCTAGCGCATGTGGT+TGG + chr3_1:30472518-30472537 None:intergenic 60.0%
! GGTCTTTGGGCTGGGCCCAA+TGG - chr3_1:30471743-30471762 Msa0355670:intron 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 30470242 30472965 30470242 ID=Msa0355670;Name=Msa0355670
chr3_1 mRNA 30470242 30472965 30470242 ID=Msa0355670-mRNA-1;Parent=Msa0355670;Name=Msa0355670-mRNA-1;_AED=0.05;_eAED=0.05;_QI=16|1|0.75|1|1|1|4|115|286
chr3_1 exon 30470242 30470604 30470242 ID=Msa0355670-mRNA-1:exon:6288;Parent=Msa0355670-mRNA-1
chr3_1 exon 30471247 30471496 30471247 ID=Msa0355670-mRNA-1:exon:6287;Parent=Msa0355670-mRNA-1
chr3_1 exon 30472238 30472477 30472238 ID=Msa0355670-mRNA-1:exon:6286;Parent=Msa0355670-mRNA-1
chr3_1 exon 30472827 30472965 30472827 ID=Msa0355670-mRNA-1:exon:6285;Parent=Msa0355670-mRNA-1
chr3_1 five_prime_UTR 30472950 30472965 30472950 ID=Msa0355670-mRNA-1:five_prime_utr;Parent=Msa0355670-mRNA-1
chr3_1 CDS 30472827 30472949 30472827 ID=Msa0355670-mRNA-1:cds;Parent=Msa0355670-mRNA-1
chr3_1 CDS 30472238 30472477 30472238 ID=Msa0355670-mRNA-1:cds;Parent=Msa0355670-mRNA-1
chr3_1 CDS 30471247 30471496 30471247 ID=Msa0355670-mRNA-1:cds;Parent=Msa0355670-mRNA-1
chr3_1 CDS 30470357 30470604 30470357 ID=Msa0355670-mRNA-1:cds;Parent=Msa0355670-mRNA-1
chr3_1 three_prime_UTR 30470242 30470356 30470242 ID=Msa0355670-mRNA-1:three_prime_utr;Parent=Msa0355670-mRNA-1
Gene Sequence

>Msa0355670

ATGGGGCTTCCTAGGCCTCCAGCATTTCTGGACCCATCTTTAAGTGAAGATGTTATATTGGAAAATGGAGTAAACTATGCTTCTGGAGGTGGTGGCATATTGAATGAAACTGGCAGTTATTTTATTCAAAGATTTTCTCTCTACAAACAAATTGAGCTGTTTCAAGGGACACAAGAACTAATTAGAAGCAAAATTGGAAAAGTTGAAGCAGAGAAGTTTTTTCTGGAAGCACGTTATGTTGTTGCTTTAGGTAGCAATGACTTCATCAACAATTATTTGATGCCTCTTTATAGTGATTCATGGACATACAACGATGAAACCTTCATTGATTACTTAGTAGGAACACTTCAAGAACAACTAAAGGTACTGCATAGCCTAGGTGCAAGGCAACTGATGGTCTTTGGGCTGGGCCCAATGGGCTGCATTCCCCTTCAAAGAGTCCTTAGTACATCTGGGAATTGTCAAGAAAAAACAAACAAGTTAGCTCTTAGCTTTAACAAAGCTTCAAGTAAGGTAGTAAATGATTTGGGGAAGCAACTTCCAAATGCAAGCTACAGATTTGGAGATGCTTATGATGTGGTTAATGATGTAATTAGCAACCCCAGCAAGTATGGGTTCCAAAATGCAGACTCACCATGTTGCTCATTTGGGAGGATTAGACCAGCTCTTACATGTATACCAGCATCAACATTATGCAAAGATAGAAGCAAGTACGTATTTTGGGATGAGTATCATCCATCAGACAAAGCTAATGAACTAATTGCCACTGAACTCATCAAGAAGTTTGGGTTTAAACGTGTTGATCAAGCAGAAACTCCTTCACCATCACCAGAGGTTGCTCCATCTCCTTCAGATGATTAA
Protein sequence

>Msa0355670

MGLPRPPAFLDPSLSEDVILENGVNYASGGGGILNETGSYFIQRFSLYKQIELFQGTQELIRSKIGKVEAEKFFLEARYVVALGSNDFINNYLMPLYSDSWTYNDETFIDYLVGTLQEQLKVLHSLGARQLMVFGLGPMGCIPLQRVLSTSGNCQEKTNKLALSFNKASSKVVNDLGKQLPNASYRFGDAYDVVNDVISNPSKYGFQNADSPCCSFGRIRPALTCIPASTLCKDRSKYVFWDEYHPSDKANELIATELIKKFGFKRVDQAETPSPSPEVAPSPSDD*