Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0357810 | XP_003616690.1 | 75.000 | 144 | 36 | 0 | 11 | 154 | 1 | 144 | 3.36e-74 | 229 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0357810 | sp|Q8LBW3|LBD12_ARATH | 63.158 | 133 | 45 | 1 | 13 | 141 | 5 | 137 | 2.13e-56 | 177 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0357810 | G7K288 | 75.000 | 144 | 36 | 0 | 11 | 154 | 1 | 144 | 1.60e-74 | 229 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0357810 | TF | LOB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0357750 | Msa0357810 | 0.839613 | 1.426915e-57 | -8.615850e-47 |
| Msa0357800 | Msa0357810 | 0.873012 | 2.043843e-67 | -8.615850e-47 |
| Msa0357810 | Msa0357820 | 0.842066 | 3.245177e-58 | -8.615850e-47 |
| Msa0357810 | Msa0357880 | 0.862085 | 6.505006e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0357810 | MtrunA17_Chr5g0437571 | 75.000 | 144 | 36 | 0 | 11 | 154 | 1 | 144 | 3.09e-78 | 229 |
| Msa0357810 | MtrunA17_Chr3g0114061 | 64.138 | 145 | 44 | 3 | 11 | 151 | 1 | 141 | 5.04e-60 | 183 |
| Msa0357810 | MtrunA17_Chr3g0106101 | 55.629 | 151 | 56 | 2 | 12 | 151 | 3 | 153 | 8.41e-55 | 170 |
| Msa0357810 | MtrunA17_Chr2g0311601 | 61.719 | 128 | 41 | 1 | 9 | 136 | 6 | 125 | 2.32e-52 | 163 |
| Msa0357810 | MtrunA17_Chr4g0043421 | 64.035 | 114 | 41 | 0 | 9 | 122 | 8 | 121 | 3.25e-50 | 158 |
| Msa0357810 | MtrunA17_Chr4g0030001 | 58.772 | 114 | 46 | 1 | 15 | 127 | 23 | 136 | 3.11e-45 | 146 |
| Msa0357810 | MtrunA17_Chr1g0200201 | 60.360 | 111 | 44 | 0 | 17 | 127 | 73 | 183 | 1.54e-43 | 143 |
| Msa0357810 | MtrunA17_Chr3g0115431 | 61.538 | 104 | 40 | 0 | 13 | 116 | 6 | 109 | 1.90e-42 | 140 |
| Msa0357810 | MtrunA17_Chr5g0438091 | 51.128 | 133 | 58 | 1 | 6 | 131 | 22 | 154 | 2.81e-42 | 139 |
| Msa0357810 | MtrunA17_Chr3g0117121 | 63.810 | 105 | 38 | 0 | 12 | 116 | 6 | 110 | 5.61e-41 | 135 |
| Msa0357810 | MtrunA17_Chr7g0227511 | 62.136 | 103 | 39 | 0 | 14 | 116 | 9 | 111 | 1.21e-40 | 134 |
| Msa0357810 | MtrunA17_Chr6g0449641 | 52.459 | 122 | 58 | 0 | 14 | 135 | 7 | 128 | 1.44e-40 | 133 |
| Msa0357810 | MtrunA17_Chr4g0058651 | 62.136 | 103 | 39 | 0 | 14 | 116 | 9 | 111 | 2.67e-40 | 134 |
| Msa0357810 | MtrunA17_Chr6g0449651 | 60.194 | 103 | 41 | 0 | 14 | 116 | 65 | 167 | 5.56e-40 | 133 |
| Msa0357810 | MtrunA17_Chr5g0402611 | 52.273 | 132 | 60 | 2 | 12 | 140 | 4 | 135 | 1.14e-38 | 133 |
| Msa0357810 | MtrunA17_Chr5g0437401 | 52.846 | 123 | 56 | 1 | 13 | 135 | 8 | 128 | 1.72e-38 | 129 |
| Msa0357810 | MtrunA17_Chr3g0113891 | 60.396 | 101 | 40 | 0 | 13 | 113 | 11 | 111 | 2.85e-38 | 128 |
| Msa0357810 | MtrunA17_Chr3g0129071 | 56.481 | 108 | 47 | 0 | 15 | 122 | 46 | 153 | 1.55e-37 | 128 |
| Msa0357810 | MtrunA17_Chr3g0097221 | 54.286 | 105 | 48 | 0 | 12 | 116 | 3 | 107 | 3.68e-37 | 129 |
| Msa0357810 | MtrunA17_Chr7g0225111 | 49.550 | 111 | 56 | 0 | 15 | 125 | 4 | 114 | 7.47e-37 | 122 |
| Msa0357810 | MtrunA17_Chr5g0444351 | 47.863 | 117 | 61 | 0 | 17 | 133 | 6 | 122 | 5.78e-36 | 121 |
| Msa0357810 | MtrunA17_Chr8g0353981 | 54.237 | 118 | 52 | 1 | 12 | 129 | 3 | 118 | 1.27e-34 | 120 |
| Msa0357810 | MtrunA17_Chr5g0432451 | 58.824 | 102 | 42 | 0 | 15 | 116 | 42 | 143 | 3.82e-34 | 119 |
| Msa0357810 | MtrunA17_Chr1g0184281 | 51.429 | 105 | 50 | 1 | 12 | 115 | 11 | 115 | 3.45e-33 | 116 |
| Msa0357810 | MtrunA17_Chr5g0435641 | 41.333 | 150 | 78 | 4 | 11 | 153 | 1 | 147 | 3.56e-33 | 115 |
| Msa0357810 | MtrunA17_Chr7g0260971 | 51.429 | 105 | 50 | 1 | 15 | 118 | 13 | 117 | 1.36e-32 | 115 |
| Msa0357810 | MtrunA17_Chr6g0460951 | 39.437 | 142 | 75 | 3 | 15 | 153 | 39 | 172 | 5.45e-31 | 111 |
| Msa0357810 | MtrunA17_Chr7g0261031 | 51.402 | 107 | 50 | 2 | 11 | 115 | 2 | 108 | 7.23e-31 | 110 |
| Msa0357810 | MtrunA17_Chr8g0351721 | 47.934 | 121 | 60 | 2 | 13 | 132 | 15 | 133 | 1.54e-30 | 109 |
| Msa0357810 | MtrunA17_Chr8g0351701 | 53.125 | 96 | 44 | 1 | 16 | 110 | 23 | 118 | 2.13e-30 | 109 |
| Msa0357810 | MtrunA17_Chr8g0374591 | 46.535 | 101 | 54 | 0 | 16 | 116 | 8 | 108 | 3.46e-30 | 106 |
| Msa0357810 | MtrunA17_Chr1g0184271 | 40.714 | 140 | 80 | 2 | 16 | 154 | 12 | 149 | 4.38e-30 | 108 |
| Msa0357810 | MtrunA17_Chr7g0245871 | 50.980 | 102 | 49 | 1 | 16 | 116 | 27 | 128 | 1.35e-29 | 108 |
| Msa0357810 | MtrunA17_Chr8g0374601 | 44.643 | 112 | 60 | 1 | 16 | 127 | 26 | 135 | 7.84e-29 | 107 |
| Msa0357810 | MtrunA17_Chr7g0245861 | 52.688 | 93 | 41 | 2 | 13 | 102 | 9 | 101 | 2.50e-27 | 99.4 |
| Msa0357810 | MtrunA17_Chr6g0452691 | 37.719 | 114 | 70 | 1 | 11 | 123 | 4 | 117 | 7.35e-25 | 94.4 |
| Msa0357810 | MtrunA17_Chr6g0460941 | 46.591 | 88 | 46 | 1 | 16 | 102 | 7 | 94 | 8.54e-25 | 91.7 |
| Msa0357810 | MtrunA17_Chr8g0374581 | 43.363 | 113 | 61 | 2 | 16 | 127 | 8 | 118 | 1.14e-23 | 92.4 |
| Msa0357810 | MtrunA17_Chr6g0452661 | 35.135 | 111 | 71 | 1 | 14 | 123 | 7 | 117 | 1.05e-21 | 87.8 |
| Msa0357810 | MtrunA17_Chr6g0452671 | 32.283 | 127 | 86 | 0 | 17 | 143 | 12 | 138 | 1.18e-21 | 86.7 |
| Msa0357810 | MtrunA17_Chr4g0059901 | 43.011 | 93 | 53 | 0 | 17 | 109 | 11 | 103 | 2.27e-21 | 87.0 |
| Msa0357810 | MtrunA17_Chr4g0040831 | 37.391 | 115 | 66 | 1 | 17 | 131 | 16 | 124 | 1.71e-20 | 83.6 |
| Msa0357810 | MtrunA17_Chr2g0330201 | 37.000 | 100 | 63 | 0 | 17 | 116 | 20 | 119 | 1.88e-20 | 85.1 |
| Msa0357810 | MtrunA17_Chr8g0342351 | 36.000 | 100 | 64 | 0 | 17 | 116 | 13 | 112 | 3.81e-20 | 84.0 |
| Msa0357810 | MtrunA17_Chr2g0326051 | 54.412 | 68 | 31 | 0 | 60 | 127 | 4 | 71 | 2.37e-19 | 78.6 |
| Msa0357810 | MtrunA17_Chr2g0326041 | 64.583 | 48 | 17 | 0 | 15 | 62 | 32 | 79 | 9.95e-19 | 75.9 |
| Msa0357810 | MtrunA17_Chr4g0055441 | 31.579 | 114 | 77 | 1 | 17 | 129 | 3 | 116 | 3.61e-18 | 76.3 |
| Msa0357810 | MtrunA17_Chr4g0046201 | 36.559 | 93 | 59 | 0 | 11 | 103 | 1 | 93 | 4.97e-18 | 78.2 |
| Msa0357810 | MtrunA17_Chr5g0439111 | 42.169 | 83 | 47 | 1 | 14 | 95 | 7 | 89 | 6.77e-16 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0357810 | AT2G30130.1 | 63.158 | 133 | 45 | 1 | 13 | 141 | 5 | 137 | 2.17e-57 | 177 |
| Msa0357810 | AT2G28500.1 | 50.714 | 140 | 68 | 1 | 15 | 154 | 54 | 192 | 4.62e-48 | 155 |
| Msa0357810 | AT1G07900.1 | 63.889 | 108 | 37 | 1 | 15 | 122 | 32 | 137 | 9.95e-48 | 153 |
| Msa0357810 | AT1G31320.1 | 58.537 | 123 | 51 | 0 | 7 | 129 | 4 | 126 | 2.20e-44 | 144 |
| Msa0357810 | AT1G16530.1 | 59.813 | 107 | 42 | 1 | 15 | 120 | 13 | 119 | 1.66e-42 | 139 |
| Msa0357810 | AT3G27650.1 | 61.165 | 103 | 40 | 0 | 14 | 116 | 37 | 139 | 1.59e-40 | 134 |
| Msa0357810 | AT5G63090.4 | 62.264 | 106 | 39 | 1 | 14 | 118 | 9 | 114 | 1.75e-40 | 134 |
| Msa0357810 | AT5G63090.3 | 62.264 | 106 | 39 | 1 | 14 | 118 | 9 | 114 | 1.75e-40 | 134 |
| Msa0357810 | AT5G63090.2 | 62.264 | 106 | 39 | 1 | 14 | 118 | 9 | 114 | 1.75e-40 | 134 |
| Msa0357810 | AT5G63090.1 | 62.264 | 106 | 39 | 1 | 14 | 118 | 9 | 114 | 1.75e-40 | 134 |
| Msa0357810 | AT3G26620.1 | 48.800 | 125 | 55 | 1 | 17 | 141 | 6 | 121 | 4.09e-39 | 129 |
| Msa0357810 | AT3G26660.1 | 56.000 | 100 | 44 | 0 | 17 | 116 | 6 | 105 | 1.30e-38 | 127 |
| Msa0357810 | AT2G23660.2 | 52.542 | 118 | 53 | 2 | 14 | 130 | 3 | 118 | 1.30e-38 | 133 |
| Msa0357810 | AT2G23660.3 | 52.542 | 118 | 53 | 2 | 14 | 130 | 3 | 118 | 1.30e-38 | 133 |
| Msa0357810 | AT2G23660.1 | 52.542 | 118 | 53 | 2 | 14 | 130 | 3 | 118 | 1.30e-38 | 133 |
| Msa0357810 | AT2G30340.1 | 52.101 | 119 | 57 | 0 | 15 | 133 | 51 | 169 | 6.08e-38 | 130 |
| Msa0357810 | AT2G30340.2 | 52.101 | 119 | 57 | 0 | 15 | 133 | 52 | 170 | 6.09e-38 | 130 |
| Msa0357810 | AT3G11090.1 | 54.310 | 116 | 52 | 1 | 14 | 128 | 9 | 124 | 1.90e-37 | 126 |
| Msa0357810 | AT5G66870.1 | 52.459 | 122 | 57 | 1 | 12 | 132 | 3 | 124 | 6.43e-37 | 129 |
| Msa0357810 | AT1G65620.1 | 60.000 | 105 | 42 | 0 | 12 | 116 | 5 | 109 | 8.59e-36 | 123 |
| Msa0357810 | AT1G65620.4 | 60.000 | 105 | 42 | 0 | 12 | 116 | 5 | 109 | 8.59e-36 | 123 |
| Msa0357810 | AT1G65620.3 | 60.000 | 105 | 42 | 0 | 12 | 116 | 5 | 109 | 8.59e-36 | 123 |
| Msa0357810 | AT1G65620.5 | 60.000 | 105 | 42 | 0 | 12 | 116 | 5 | 109 | 8.59e-36 | 123 |
| Msa0357810 | AT1G65620.2 | 60.000 | 105 | 42 | 0 | 12 | 116 | 5 | 109 | 8.59e-36 | 123 |
| Msa0357810 | AT2G40470.2 | 59.804 | 102 | 41 | 0 | 15 | 116 | 19 | 120 | 1.54e-34 | 120 |
| Msa0357810 | AT2G40470.1 | 59.804 | 102 | 41 | 0 | 15 | 116 | 44 | 145 | 2.21e-34 | 120 |
| Msa0357810 | AT4G00210.1 | 48.031 | 127 | 55 | 3 | 11 | 131 | 1 | 122 | 1.42e-33 | 118 |
| Msa0357810 | AT3G03760.1 | 52.427 | 103 | 48 | 1 | 15 | 116 | 50 | 152 | 4.55e-33 | 118 |
| Msa0357810 | AT2G42430.1 | 53.846 | 104 | 47 | 1 | 14 | 116 | 13 | 116 | 5.03e-33 | 117 |
| Msa0357810 | AT3G50510.1 | 46.018 | 113 | 59 | 1 | 4 | 116 | 2 | 112 | 1.28e-31 | 112 |
| Msa0357810 | AT3G50510.2 | 46.018 | 113 | 59 | 1 | 4 | 116 | 2 | 112 | 1.28e-31 | 112 |
| Msa0357810 | AT2G42440.1 | 43.750 | 128 | 69 | 3 | 11 | 135 | 1 | 128 | 5.57e-31 | 112 |
| Msa0357810 | AT2G45410.1 | 44.444 | 126 | 66 | 2 | 19 | 140 | 19 | 144 | 7.85e-31 | 110 |
| Msa0357810 | AT2G31310.1 | 40.714 | 140 | 73 | 3 | 11 | 140 | 1 | 140 | 1.72e-29 | 106 |
| Msa0357810 | AT3G58190.1 | 49.495 | 99 | 49 | 1 | 16 | 113 | 11 | 109 | 2.04e-29 | 107 |
| Msa0357810 | AT5G06080.1 | 41.600 | 125 | 69 | 2 | 12 | 132 | 3 | 127 | 1.70e-27 | 101 |
| Msa0357810 | AT2G45420.1 | 46.154 | 104 | 55 | 1 | 19 | 121 | 40 | 143 | 6.43e-27 | 102 |
| Msa0357810 | AT4G00220.1 | 48.077 | 104 | 53 | 1 | 19 | 121 | 20 | 123 | 6.51e-27 | 101 |
| Msa0357810 | AT5G35900.1 | 41.748 | 103 | 60 | 0 | 17 | 119 | 6 | 108 | 1.62e-24 | 94.4 |
| Msa0357810 | AT3G13850.1 | 37.600 | 125 | 64 | 3 | 17 | 127 | 37 | 161 | 9.40e-24 | 94.0 |
| Msa0357810 | AT1G72980.1 | 40.196 | 102 | 61 | 0 | 15 | 116 | 12 | 113 | 5.46e-22 | 88.2 |
| Msa0357810 | AT3G47870.1 | 40.000 | 90 | 54 | 0 | 10 | 99 | 30 | 119 | 7.17e-19 | 81.6 |
| Msa0357810 | AT1G06280.1 | 44.156 | 77 | 43 | 0 | 17 | 93 | 25 | 101 | 1.15e-17 | 76.6 |
| Msa0357810 | AT2G19820.1 | 37.500 | 96 | 59 | 1 | 15 | 109 | 11 | 106 | 5.90e-17 | 72.8 |
| Msa0357810 | AT4G22700.1 | 41.758 | 91 | 51 | 2 | 17 | 106 | 6 | 95 | 1.03e-15 | 71.2 |
| Msa0357810 | AT5G15060.1 | 41.892 | 74 | 39 | 2 | 17 | 87 | 18 | 90 | 1.20e-12 | 62.0 |
| Msa0357810 | AT1G36000.1 | 28.261 | 92 | 66 | 0 | 11 | 102 | 4 | 95 | 4.21e-12 | 60.1 |
Find 22 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGAACTACGACAAACTTT+TGG | 0.258263 | 3_1:+41594463 | None:intergenic |
| AGATTGAGTGACCCAGTTTA+TGG | 0.284882 | 3_1:-41591383 | Msa0357810:CDS |
| AACAAGAAATATCATAATTA+AGG | 0.293198 | 3_1:+41591186 | None:intergenic |
| GGAGCAAAGATGCAATCTTT+TGG | 0.343297 | 3_1:+41594507 | None:intergenic |
| GCTCCAGCACAACCATAAAC+TGG | 0.357617 | 3_1:+41591371 | None:intergenic |
| CATATATCACTTGCAAAATC+AGG | 0.363361 | 3_1:-41591348 | Msa0357810:CDS |
| GCACCTTCCCTTTGCTGAAT+CGG | 0.373246 | 3_1:+41591437 | None:intergenic |
| AGGTATTGAGCGAGTTCATC+TGG | 0.379557 | 3_1:+41591206 | None:intergenic |
| CAACGTTGGCAGAATATTGC+AGG | 0.427266 | 3_1:-41594424 | Msa0357810:intron |
| GGTTCAAGAGAAGGAAAATA+AGG | 0.429065 | 3_1:+41594486 | None:intergenic |
| TCTTGGTTGAATTGTGGTGC+TGG | 0.452174 | 3_1:+41591248 | None:intergenic |
| GACCCAGTTTATGGTTGTGC+TGG | 0.452179 | 3_1:-41591374 | Msa0357810:CDS |
| TAAAGTAAGATGTGTGATCT+TGG | 0.468213 | 3_1:+41591231 | None:intergenic |
| GGATCTTCCGATTCAGCAAA+GGG | 0.503129 | 3_1:-41591444 | Msa0357810:CDS |
| TTGCTCGAGCAACTGCAAGT+TGG | 0.520454 | 3_1:+41591309 | None:intergenic |
| CTCCAGCACAACCATAAACT+GGG | 0.573541 | 3_1:+41591372 | None:intergenic |
| GTGTGATCTTGGTTGAATTG+TGG | 0.577677 | 3_1:+41591242 | None:intergenic |
| AGGATCTTCCGATTCAGCAA+AGG | 0.581668 | 3_1:-41591445 | Msa0357810:CDS |
| AAAGTTTGTCGTAGTTCACA+AGG | 0.596548 | 3_1:-41594460 | Msa0357810:CDS |
| AGAATCTTGCATGAAGCACA+TGG | 0.616501 | 3_1:+41594543 | None:intergenic |
| CTTCCGATTCAGCAAAGGGA+AGG | 0.633097 | 3_1:-41591440 | Msa0357810:CDS |
| GAAAAGAAAATTGTAAACAG+AGG | 0.681415 | 3_1:+41594591 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATATAAACAACTAAAAA+GGG | + | chr3_1:41592197-41592216 | None:intergenic | 10.0% |
| !! | TATTATATAAACAACTAAAA+AGG | + | chr3_1:41592198-41592217 | None:intergenic | 10.0% |
| !!! | GAGTATTATTTTATAATTAT+CGG | - | chr3_1:41592366-41592385 | Msa0357810:intron | 10.0% |
| !!! | TTTTAATTTTACTGATTTTA+TGG | + | chr3_1:41592878-41592897 | None:intergenic | 10.0% |
| !! | TTAATAAAATTGAGAAATAT+AGG | + | chr3_1:41592980-41592999 | None:intergenic | 10.0% |
| !!! | AAAAAAAAAAAAAAAGTGTT+TGG | + | chr3_1:41593773-41593792 | None:intergenic | 10.0% |
| !! | TAAATAATTAACCATTAAAA+AGG | + | chr3_1:41594049-41594068 | None:intergenic | 10.0% |
| !!! | ATAAGTGTTTATTATTTTTT+AGG | - | chr3_1:41594091-41594110 | Msa0357810:intron | 10.0% |
| !!! | TAAGTGTTTATTATTTTTTA+GGG | - | chr3_1:41594092-41594111 | Msa0357810:intron | 10.0% |
| !! | TTAATCATCTAAAAAGTAAA+TGG | + | chr3_1:41591397-41591416 | None:intergenic | 15.0% |
| !!! | ATTTTTTGTAGACATATTTT+AGG | - | chr3_1:41591578-41591597 | Msa0357810:intron | 15.0% |
| !! | GTATTAAATACAAATTCATA+AGG | + | chr3_1:41591806-41591825 | None:intergenic | 15.0% |
| !! | TAAAAAAGAAAGCTAAAAAA+AGG | + | chr3_1:41591862-41591881 | None:intergenic | 15.0% |
| !!! | CATTTTGAAACAATTTTTTT+TGG | + | chr3_1:41591937-41591956 | None:intergenic | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | + | chr3_1:41592038-41592057 | None:intergenic | 15.0% |
| !!! | TTTTTGAAAGAGTATTTTTT+TGG | + | chr3_1:41592934-41592953 | None:intergenic | 15.0% |
| !!! | GTTTGATGATTTTTTTAAAT+TGG | + | chr3_1:41593666-41593685 | None:intergenic | 15.0% |
| !!! | ATGATTTAAAACCTTTTTAA+TGG | - | chr3_1:41594035-41594054 | Msa0357810:intron | 15.0% |
| !!! | AAGTGTTTATTATTTTTTAG+GGG | - | chr3_1:41594093-41594112 | Msa0357810:intron | 15.0% |
| !! | AACAAGAAATATCATAATTA+AGG | + | chr3_1:41594589-41594608 | None:intergenic | 15.0% |
| !! | CAATATAAACAACTAATCTT+GGG | + | chr3_1:41591449-41591468 | None:intergenic | 20.0% |
| !! | ACAATATAAACAACTAATCT+TGG | + | chr3_1:41591450-41591469 | None:intergenic | 20.0% |
| !!! | TAGTTTGTGAATAAAATGTT+TGG | - | chr3_1:41591515-41591534 | Msa0357810:intron | 20.0% |
| !!! | ATTTTCAGAAAAGTAACTAT+TGG | - | chr3_1:41591657-41591676 | Msa0357810:intron | 20.0% |
| !!! | TCTCTTTTGTTTTTTATATC+CGG | + | chr3_1:41591781-41591800 | None:intergenic | 20.0% |
| !! | GAATAGAAAAAACTTAGAAA+AGG | + | chr3_1:41591835-41591854 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | + | chr3_1:41591977-41591996 | None:intergenic | 20.0% |
| !!! | AAGTATGTAAAGAGTATTAT+TGG | + | chr3_1:41592015-41592034 | None:intergenic | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | - | chr3_1:41592052-41592071 | Msa0357810:intron | 20.0% |
| !! | CAAATATCCTTATTAACTAT+TGG | + | chr3_1:41592062-41592081 | None:intergenic | 20.0% |
| !! | CAATAGTTAATAAGGATATT+TGG | - | chr3_1:41592060-41592079 | Msa0357810:intron | 20.0% |
| !!! | TAAGCAAATTTTGACTTTTT+AGG | - | chr3_1:41592241-41592260 | Msa0357810:intron | 20.0% |
| !!! | ATCGGATTTTAAAATATAGT+TGG | - | chr3_1:41592384-41592403 | Msa0357810:intron | 20.0% |
| !!! | AGTCATCAATTTATATGTTT+TGG | + | chr3_1:41592519-41592538 | None:intergenic | 20.0% |
| !! | ATTAAAATCTAAATTGCACA+GGG | + | chr3_1:41592595-41592614 | None:intergenic | 20.0% |
| !! | TATTAAAATCTAAATTGCAC+AGG | + | chr3_1:41592596-41592615 | None:intergenic | 20.0% |
| !!! | TTAGATTTTAATATCCGAAT+TGG | - | chr3_1:41592603-41592622 | Msa0357810:intron | 20.0% |
| !!! | TTTTGAACATATTTGTAACA+TGG | + | chr3_1:41593115-41593134 | None:intergenic | 20.0% |
| !! | TCGGATTATAAAATACAAAT+TGG | - | chr3_1:41593259-41593278 | Msa0357810:intron | 20.0% |
| !!! | TTTAAAATCTAACAATCTCA+AGG | - | chr3_1:41593331-41593350 | Msa0357810:intron | 20.0% |
| !! | TTAAAATCTAACAATCTCAA+GGG | - | chr3_1:41593332-41593351 | Msa0357810:intron | 20.0% |
| !! | TAGTCTAAATTGATTGAATA+TGG | - | chr3_1:41593412-41593431 | Msa0357810:intron | 20.0% |
| !!! | TTTTTAATTCATCCACAAAA+TGG | - | chr3_1:41593581-41593600 | Msa0357810:intron | 20.0% |
| !!! | AAACTGATTTAAAAAGTGAT+TGG | + | chr3_1:41593641-41593660 | None:intergenic | 20.0% |
| !!! | TATTTAGGAAATTGCTTTTT+AGG | + | chr3_1:41593730-41593749 | None:intergenic | 20.0% |
| !! | AGCAATTTCCTAAATATTTA+CGG | - | chr3_1:41593734-41593753 | Msa0357810:intron | 20.0% |
| !!! | TTTTTTGTTTTGCAATGAAA+AGG | - | chr3_1:41593993-41594012 | Msa0357810:intron | 20.0% |
| !! | TTTTCGAAGAAAAAAATGAG+TGG | - | chr3_1:41591199-41591218 | Msa0357810:CDS | 25.0% |
| !! | TTTTCTTTTGGTCTCAAAAA+AGG | + | chr3_1:41591541-41591560 | None:intergenic | 25.0% |
| !!! | ATGTAAAGAGTATTATTGGA+GGG | + | chr3_1:41592011-41592030 | None:intergenic | 25.0% |
| !!! | TATGTAAAGAGTATTATTGG+AGG | + | chr3_1:41592012-41592031 | None:intergenic | 25.0% |
| ! | TATATAATAATTACTCCCTC+TGG | - | chr3_1:41592209-41592228 | Msa0357810:intron | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | + | chr3_1:41592305-41592324 | None:intergenic | 25.0% |
| !! | ATTTTGCTTATAAATGAGAC+CGG | - | chr3_1:41592340-41592359 | Msa0357810:intron | 25.0% |
| ! | TTATAAAATAATACTCCCTC+CGG | + | chr3_1:41592362-41592381 | None:intergenic | 25.0% |
| ! | TACAAGTAGAATTGTCATAT+AGG | - | chr3_1:41592460-41592479 | Msa0357810:intron | 25.0% |
| ! | ATACTAAGCAAATCATGATT+GGG | + | chr3_1:41592495-41592514 | None:intergenic | 25.0% |
| ! | TATACTAAGCAAATCATGAT+TGG | + | chr3_1:41592496-41592515 | None:intergenic | 25.0% |
| ! | TTAAAATCTAAATTGCACAG+GGG | + | chr3_1:41592594-41592613 | None:intergenic | 25.0% |
| !! | AAATGAGTTTTTCACCAATT+CGG | + | chr3_1:41592620-41592639 | None:intergenic | 25.0% |
| ! | TATATAATCTGAACTCAGTT+AGG | - | chr3_1:41592713-41592732 | Msa0357810:intron | 25.0% |
| ! | AATAACTATTCATGAGAGTT+AGG | + | chr3_1:41592775-41592794 | None:intergenic | 25.0% |
| !!! | CTCTCATGAATAGTTATTTT+AGG | - | chr3_1:41592777-41592796 | Msa0357810:intron | 25.0% |
| !!! | TTTTACTGATTTTATGGTCA+AGG | + | chr3_1:41592872-41592891 | None:intergenic | 25.0% |
| !!! | TAACATGGATAGTCATTTTA+AGG | + | chr3_1:41593100-41593119 | None:intergenic | 25.0% |
| !! | ATTTTCGGAAGGAAAAAAAT+AGG | - | chr3_1:41593356-41593375 | Msa0357810:intron | 25.0% |
| !! | TTTTCGGAAGGAAAAAAATA+GGG | - | chr3_1:41593357-41593376 | Msa0357810:intron | 25.0% |
| ! | CTAAATTGATTGAATATGGT+TGG | - | chr3_1:41593416-41593435 | Msa0357810:intron | 25.0% |
| ! | GACTCAACTCATAAAAATTT+GGG | - | chr3_1:41593490-41593509 | Msa0357810:intron | 25.0% |
| !!! | TTGATTTTTGAGCAATTAGA+GGG | + | chr3_1:41593532-41593551 | None:intergenic | 25.0% |
| !!! | TTTGATTTTTGAGCAATTAG+AGG | + | chr3_1:41593533-41593552 | None:intergenic | 25.0% |
| ! | TGGATGAATTAAAAAGTGAT+TGG | + | chr3_1:41593576-41593595 | None:intergenic | 25.0% |
| ! | GCAATTTCCTAAATATTTAC+GGG | - | chr3_1:41593735-41593754 | Msa0357810:intron | 25.0% |
| ! | TCATTAACCCGTAAATATTT+AGG | + | chr3_1:41593745-41593764 | None:intergenic | 25.0% |
| ! | GTAATGTATTAAAGGTTTAG+GGG | + | chr3_1:41593911-41593930 | None:intergenic | 25.0% |
| ! | GGTAATGTATTAAAGGTTTA+GGG | + | chr3_1:41593912-41593931 | None:intergenic | 25.0% |
| !!! | TGTTGTACTTTTTTACTATG+CGG | + | chr3_1:41594186-41594205 | None:intergenic | 25.0% |
| !! | AAAAAGTACAACAATGTTGT+TGG | - | chr3_1:41594193-41594212 | Msa0357810:intron | 25.0% |
| ! | GCAATTAGCTATGAAGTTTT+AGG | + | chr3_1:41591611-41591630 | None:intergenic | 30.0% |
| ! | TATTGGTTGTTACCACTTAA+TGG | - | chr3_1:41591674-41591693 | Msa0357810:intron | 30.0% |
| ATTGGTTGTTACCACTTAAT+GGG | - | chr3_1:41591675-41591694 | Msa0357810:intron | 30.0% | |
| !!! | TGTTTTTTATATCCGGAAGT+TGG | + | chr3_1:41591774-41591793 | None:intergenic | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | + | chr3_1:41592140-41592159 | None:intergenic | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | - | chr3_1:41592141-41592160 | Msa0357810:intron | 30.0% |
| TTCATAAACACCCTATTTCA+AGG | - | chr3_1:41592644-41592663 | Msa0357810:intron | 30.0% | |
| TCATAAACACCCTATTTCAA+GGG | - | chr3_1:41592645-41592664 | Msa0357810:intron | 30.0% | |
| ! | CTGTTTTATCCCTTGAAATA+GGG | + | chr3_1:41592657-41592676 | None:intergenic | 30.0% |
| ! | ACTGTTTTATCCCTTGAAAT+AGG | + | chr3_1:41592658-41592677 | None:intergenic | 30.0% |
| TATATAATCCGAACTCAGTT+AGG | - | chr3_1:41592684-41592703 | Msa0357810:intron | 30.0% | |
| ! | GATGGATCATTAACATTTTC+TGG | - | chr3_1:41592735-41592754 | Msa0357810:intron | 30.0% |
| ATTATTCTTCCTAACTCTCA+TGG | + | chr3_1:41593072-41593091 | None:intergenic | 30.0% | |
| TCCGAAAACCTCAAAAAATA+GGG | + | chr3_1:41593244-41593263 | None:intergenic | 30.0% | |
| ATCCGAAAACCTCAAAAAAT+AGG | + | chr3_1:41593245-41593264 | None:intergenic | 30.0% | |
| ! | TGAGTTTTTCCTTTGTAATG+AGG | + | chr3_1:41593303-41593322 | None:intergenic | 30.0% |
| TACAAAGGAAAAACTCAGTT+CGG | - | chr3_1:41593306-41593325 | Msa0357810:intron | 30.0% | |
| CGACTCAACTCATAAAAATT+TGG | - | chr3_1:41593489-41593508 | Msa0357810:intron | 30.0% | |
| AAATTTGGGTGTAGTTCATT+AGG | - | chr3_1:41593504-41593523 | Msa0357810:intron | 30.0% | |
| ! | GACACTTAATAACCATTTTG+TGG | + | chr3_1:41593596-41593615 | None:intergenic | 30.0% |
| !! | TCGTTCGACAATTTTTAGAT+TGG | - | chr3_1:41593614-41593633 | Msa0357810:intron | 30.0% |
| ! | ATATTTACGGGTTAATGAGT+CGG | - | chr3_1:41593747-41593766 | Msa0357810:intron | 30.0% |
| !! | TAGGGGTCAAATTTTGATAA+GGG | + | chr3_1:41593894-41593913 | None:intergenic | 30.0% |
| !! | TTAGGGGTCAAATTTTGATA+AGG | + | chr3_1:41593895-41593914 | None:intergenic | 30.0% |
| GGGTAATGTATTAAAGGTTT+AGG | + | chr3_1:41593913-41593932 | None:intergenic | 30.0% | |
| ! | TTTTACTATGCGGAAAAGTA+AGG | + | chr3_1:41594176-41594195 | None:intergenic | 30.0% |
| AAGAACACAATGATTGATCA+AGG | + | chr3_1:41594244-41594263 | None:intergenic | 30.0% | |
| ! | TTTTTCTCATACAATGCATC+AGG | - | chr3_1:41594307-41594326 | Msa0357810:intron | 30.0% |
| ! | CTGATTTTGCAAGTGATATA+TGG | + | chr3_1:41594426-41594445 | None:intergenic | 30.0% |
| CATATATCACTTGCAAAATC+AGG | - | chr3_1:41594424-41594443 | Msa0357810:intron | 30.0% | |
| TAAAGTAAGATGTGTGATCT+TGG | + | chr3_1:41594544-41594563 | None:intergenic | 30.0% | |
| ! | GAGCAAAGATGCAATCTTTT+GGG | + | chr3_1:41591267-41591286 | None:intergenic | 35.0% |
| GGTTCAAGAGAAGGAAAATA+AGG | + | chr3_1:41591289-41591308 | None:intergenic | 35.0% | |
| ! | TGAACTACGACAAACTTTTG+GGG | + | chr3_1:41591310-41591329 | None:intergenic | 35.0% |
| ! | GTGAACTACGACAAACTTTT+GGG | + | chr3_1:41591311-41591330 | None:intergenic | 35.0% |
| ! | TGTGAACTACGACAAACTTT+TGG | + | chr3_1:41591312-41591331 | None:intergenic | 35.0% |
| AAAGTTTGTCGTAGTTCACA+AGG | - | chr3_1:41591312-41591331 | Msa0357810:CDS | 35.0% | |
| !!! | CATTCCTCGCTTTTTTCTTT+TGG | + | chr3_1:41591553-41591572 | None:intergenic | 35.0% |
| TTGGTTGTTACCACTTAATG+GGG | - | chr3_1:41591676-41591695 | Msa0357810:intron | 35.0% | |
| ! | CCATCGGATCACAATTTTTA+TGG | + | chr3_1:41591720-41591739 | None:intergenic | 35.0% |
| CCATAAAAATTGTGATCCGA+TGG | - | chr3_1:41591717-41591736 | Msa0357810:intron | 35.0% | |
| GTTCTCAAATTGTTCACCAT+CGG | + | chr3_1:41591736-41591755 | None:intergenic | 35.0% | |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr3_1:41591911-41591930 | None:intergenic | 35.0% |
| TGCTTATAATAGTGACCAGA+GGG | + | chr3_1:41592227-41592246 | None:intergenic | 35.0% | |
| TTGCTTATAATAGTGACCAG+AGG | + | chr3_1:41592228-41592247 | None:intergenic | 35.0% | |
| CATTGTAACTTTAACAGTCG+TGG | + | chr3_1:41592426-41592445 | None:intergenic | 35.0% | |
| TAAGCAAATCATGATTGGGT+TGG | + | chr3_1:41592491-41592510 | None:intergenic | 35.0% | |
| !!! | GCATTTTTGGTAAAAGCACA+AGG | + | chr3_1:41592572-41592591 | None:intergenic | 35.0% |
| TAATCCATCCTAACTGAGTT+CGG | + | chr3_1:41592695-41592714 | None:intergenic | 35.0% | |
| TAATCTGAACTCAGTTAGGA+TGG | - | chr3_1:41592717-41592736 | Msa0357810:intron | 35.0% | |
| !!! | ACCGGATTTTTGGTTAAGAA+CGG | + | chr3_1:41592813-41592832 | None:intergenic | 35.0% |
| ! | TAACCAAAAATCCGGTTTTC+AGG | - | chr3_1:41592817-41592836 | Msa0357810:intron | 35.0% |
| !! | CTCTCATGGATAGTCATTTT+AGG | + | chr3_1:41593058-41593077 | None:intergenic | 35.0% |
| AATGACTATCCATGAGAGTT+AGG | - | chr3_1:41593060-41593079 | Msa0357810:intron | 35.0% | |
| ! | TTTCTAGGGGAAAAACAGTT+AGG | + | chr3_1:41593168-41593187 | None:intergenic | 35.0% |
| ! | CCTAAACACTCTTTTTCTAG+GGG | + | chr3_1:41593181-41593200 | None:intergenic | 35.0% |
| ! | CCCTAAACACTCTTTTTCTA+GGG | + | chr3_1:41593182-41593201 | None:intergenic | 35.0% |
| !! | CCCTAGAAAAAGAGTGTTTA+GGG | - | chr3_1:41593179-41593198 | Msa0357810:intron | 35.0% |
| !! | CCTAGAAAAAGAGTGTTTAG+GGG | - | chr3_1:41593180-41593199 | Msa0357810:intron | 35.0% |
| !!! | GCCCTATTTTTTGAGGTTTT+CGG | - | chr3_1:41593240-41593259 | Msa0357810:intron | 35.0% |
| ! | CATTTTCCACCTCATTACAA+AGG | - | chr3_1:41593291-41593310 | Msa0357810:intron | 35.0% |
| ! | GTTTTTCCTTTGTAATGAGG+TGG | + | chr3_1:41593300-41593319 | None:intergenic | 35.0% |
| !!! | AACAATCTCAAGGGCATTTT+CGG | - | chr3_1:41593341-41593360 | Msa0357810:intron | 35.0% |
| CTCAAAAATCAAACTACCGT+TGG | - | chr3_1:41593540-41593559 | Msa0357810:intron | 35.0% | |
| !!! | AATTGCTTTTTAGGCAACCA+CGG | + | chr3_1:41593721-41593740 | None:intergenic | 35.0% |
| TCTAGATATAGTCACGATTG+AGG | - | chr3_1:41593798-41593817 | Msa0357810:intron | 35.0% | |
| GCTAAGGGGTAATGTATTAA+AGG | + | chr3_1:41593919-41593938 | None:intergenic | 35.0% | |
| ! | CTCAACTGATTTAAGCTAAG+GGG | + | chr3_1:41593933-41593952 | None:intergenic | 35.0% |
| ! | GCTCAACTGATTTAAGCTAA+GGG | + | chr3_1:41593934-41593953 | None:intergenic | 35.0% |
| ! | AGCTCAACTGATTTAAGCTA+AGG | + | chr3_1:41593935-41593954 | None:intergenic | 35.0% |
| AATCAAACCTGCATGATGTA+GGG | + | chr3_1:41593967-41593986 | None:intergenic | 35.0% | |
| AGAATCTTGCATGAAGCACA+TGG | + | chr3_1:41591232-41591251 | None:intergenic | 40.0% | |
| ! | GGAGCAAAGATGCAATCTTT+TGG | + | chr3_1:41591268-41591287 | None:intergenic | 40.0% |
| !!! | AACTTTTGGGGTTCAAGAGA+AGG | + | chr3_1:41591298-41591317 | None:intergenic | 40.0% |
| ! | GTCGTAGTTCACAAGGTTTT+TGG | - | chr3_1:41591319-41591338 | Msa0357810:CDS | 40.0% |
| ! | GGAACACTAAAAAGAGTACG+AGG | + | chr3_1:41591376-41591395 | None:intergenic | 40.0% |
| GAGACCAAAAGAAAAAAGCG+AGG | - | chr3_1:41591546-41591565 | Msa0357810:intron | 40.0% | |
| !! | AACGGAGGGAGTACTAAAAA+AGG | + | chr3_1:41591893-41591912 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr3_1:41592145-41592164 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr3_1:41592145-41592164 | Msa0357810:intron | 40.0% |
| TTGCTTATAAATGAGACCGG+AGG | - | chr3_1:41592343-41592362 | Msa0357810:intron | 40.0% | |
| TGCTTATAAATGAGACCGGA+GGG | - | chr3_1:41592344-41592363 | Msa0357810:intron | 40.0% | |
| !!! | AAATTGCACAGGGGCATTTT+TGG | + | chr3_1:41592585-41592604 | None:intergenic | 40.0% |
| TAATCCGAACTCAGTTAGGA+TGG | - | chr3_1:41592688-41592707 | Msa0357810:intron | 40.0% | |
| GCCGTTCTTAACCAAAAATC+CGG | - | chr3_1:41592809-41592828 | Msa0357810:intron | 40.0% | |
| ! | TAGCCTGAAAACCGGATTTT+TGG | + | chr3_1:41592823-41592842 | None:intergenic | 40.0% |
| TGATCAAGTAGCCTGAAAAC+CGG | + | chr3_1:41592831-41592850 | None:intergenic | 40.0% | |
| GATCAGATTGCTCCAAAACT+TGG | - | chr3_1:41592846-41592865 | Msa0357810:intron | 40.0% | |
| ! | TTATGGTCAAGGCCAAGTTT+TGG | + | chr3_1:41592861-41592880 | None:intergenic | 40.0% |
| !! | CCCCTAGAAAAAGAGTGTTT+AGG | - | chr3_1:41593178-41593197 | Msa0357810:intron | 40.0% |
| ! | CCCCTAAACACTCTTTTTCT+AGG | + | chr3_1:41593183-41593202 | None:intergenic | 40.0% |
| ! | GGCGCGTTACTTGAATTTTT+CGG | + | chr3_1:41593223-41593242 | None:intergenic | 40.0% |
| GGTTGGATCGATTGTTGTAA+TGG | - | chr3_1:41593433-41593452 | Msa0357810:intron | 40.0% | |
| TTGAGTCGTGAAGTTCAACA+AGG | + | chr3_1:41593477-41593496 | None:intergenic | 40.0% | |
| !! | CAAACTACCGTTGGTTTGAT+TGG | - | chr3_1:41593549-41593568 | Msa0357810:intron | 40.0% |
| GATTGGACCAATCAAACCAA+CGG | + | chr3_1:41593559-41593578 | None:intergenic | 40.0% | |
| AAACAGTAGTTAACTGTCGC+TGG | - | chr3_1:41593682-41593701 | Msa0357810:intron | 40.0% | |
| !!! | ATTGCTTTTTAGGCAACCAC+GGG | + | chr3_1:41593720-41593739 | None:intergenic | 40.0% |
| ATCAAACCTGCATGATGTAG+GGG | + | chr3_1:41593966-41593985 | None:intergenic | 40.0% | |
| GAATCAAACCTGCATGATGT+AGG | + | chr3_1:41593968-41593987 | None:intergenic | 40.0% | |
| AGATTGAGTGACCCAGTTTA+TGG | - | chr3_1:41594389-41594408 | Msa0357810:intron | 40.0% | |
| GTGTGATCTTGGTTGAATTG+TGG | + | chr3_1:41594533-41594552 | None:intergenic | 40.0% | |
| CAACGTTGGCAGAATATTGC+AGG | - | chr3_1:41591348-41591367 | Msa0357810:CDS | 45.0% | |
| GTGAGTAGAACCCCATTAAG+TGG | + | chr3_1:41591689-41591708 | None:intergenic | 45.0% | |
| ATTGAGCAATCGCCAACTTC+CGG | - | chr3_1:41591759-41591778 | Msa0357810:intron | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr3_1:41592144-41592163 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr3_1:41592144-41592163 | Msa0357810:intron | 45.0% |
| !!! | GTAACGCGCCCTATTTTTTG+AGG | - | chr3_1:41593233-41593252 | Msa0357810:intron | 45.0% |
| !!! | ATCTCAAGGGCATTTTCGGA+AGG | - | chr3_1:41593345-41593364 | Msa0357810:intron | 45.0% |
| CGCTCGAGAAATGAATATGG+TGG | - | chr3_1:41593380-41593399 | Msa0357810:intron | 45.0% | |
| TCAAACCTGCATGATGTAGG+GGG | + | chr3_1:41593965-41593984 | None:intergenic | 45.0% | |
| AGGATCTTCCGATTCAGCAA+AGG | - | chr3_1:41594327-41594346 | Msa0357810:intron | 45.0% | |
| GGATCTTCCGATTCAGCAAA+GGG | - | chr3_1:41594328-41594347 | Msa0357810:intron | 45.0% | |
| CTCCAGCACAACCATAAACT+GGG | + | chr3_1:41594403-41594422 | None:intergenic | 45.0% | |
| TCTTGGTTGAATTGTGGTGC+TGG | + | chr3_1:41594527-41594546 | None:intergenic | 45.0% | |
| !! | AGGTATTGAGCGAGTTCATC+TGG | + | chr3_1:41594569-41594588 | None:intergenic | 45.0% |
| !!! | GTTTTTGGCGCTAGCAACGT+TGG | - | chr3_1:41591334-41591353 | Msa0357810:CDS | 50.0% |
| GGGCGCTCGAGAAATGAATA+TGG | - | chr3_1:41593377-41593396 | Msa0357810:intron | 50.0% | |
| CAAACCTGCATGATGTAGGG+GGG | + | chr3_1:41593964-41593983 | None:intergenic | 50.0% | |
| CTTCCGATTCAGCAAAGGGA+AGG | - | chr3_1:41594332-41594351 | Msa0357810:intron | 50.0% | |
| GCACCTTCCCTTTGCTGAAT+CGG | + | chr3_1:41594338-41594357 | None:intergenic | 50.0% | |
| GACCCAGTTTATGGTTGTGC+TGG | - | chr3_1:41594398-41594417 | Msa0357810:intron | 50.0% | |
| GCTCCAGCACAACCATAAAC+TGG | + | chr3_1:41594404-41594423 | None:intergenic | 50.0% | |
| TTGCTCGAGCAACTGCAAGT+TGG | + | chr3_1:41594466-41594485 | None:intergenic | 50.0% | |
| GGCGCGCGAGAATGACATAT+GGG | + | chr3_1:41592551-41592570 | None:intergenic | 55.0% | |
| AGGCGCGCGAGAATGACATA+TGG | + | chr3_1:41592552-41592571 | None:intergenic | 55.0% | |
| CTGGATGTAAGAGCAACCCG+TGG | - | chr3_1:41593701-41593720 | Msa0357810:intron | 55.0% | |
| CAAACCCCCCTACATCATGC+AGG | - | chr3_1:41593957-41593976 | Msa0357810:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 41591184 | 41594610 | 41591184 | ID=Msa0357810;Name=Msa0357810 |
| chr3_1 | mRNA | 41591184 | 41594610 | 41591184 | ID=Msa0357810-mRNA-1;Parent=Msa0357810;Name=Msa0357810-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|1|1|1|2|0|155 |
| chr3_1 | exon | 41594425 | 41594610 | 41594425 | ID=Msa0357810-mRNA-1:exon:7243;Parent=Msa0357810-mRNA-1 |
| chr3_1 | exon | 41591184 | 41591465 | 41591184 | ID=Msa0357810-mRNA-1:exon:7242;Parent=Msa0357810-mRNA-1 |
| chr3_1 | CDS | 41594425 | 41594610 | 41594425 | ID=Msa0357810-mRNA-1:cds;Parent=Msa0357810-mRNA-1 |
| chr3_1 | CDS | 41591184 | 41591465 | 41591184 | ID=Msa0357810-mRNA-1:cds;Parent=Msa0357810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
