Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0369590 | XP_003601003.1 | 97.388 | 268 | 7 | 0 | 1 | 268 | 1 | 268 | 0.0 | 545 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0369590 | sp|Q944B6|TYRA1_ARATH | 54.717 | 265 | 116 | 1 | 8 | 268 | 365 | 629 | 2.79e-96 | 298 |
| Msa0369590 | sp|Q944B6|TYRA1_ARATH | 50.763 | 262 | 123 | 2 | 2 | 257 | 47 | 308 | 8.69e-86 | 271 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0369590 | G7J2E9 | 97.388 | 268 | 7 | 0 | 1 | 268 | 1 | 268 | 0.0 | 545 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0039250 | Msa0369590 | 0.803884 | 2.816275e-49 | -8.615850e-47 |
| Msa0133720 | Msa0369590 | 0.806112 | 9.634657e-50 | -8.615850e-47 |
| Msa0369590 | Msa0498450 | 0.802996 | 4.304102e-49 | -8.615850e-47 |
| Msa0369590 | Msa1172640 | 0.800704 | 1.271790e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0369590 | MtrunA17_Chr3g0114251 | 97.388 | 268 | 7 | 0 | 1 | 268 | 1 | 268 | 0.0 | 545 |
| Msa0369590 | MtrunA17_Chr5g0437781 | 76.136 | 264 | 62 | 1 | 3 | 265 | 2 | 265 | 1.30e-150 | 421 |
| Msa0369590 | MtrunA17_Chr4g0064761 | 53.462 | 260 | 117 | 2 | 2 | 257 | 377 | 636 | 5.13e-92 | 285 |
| Msa0369590 | MtrunA17_Chr4g0064761 | 50.385 | 260 | 125 | 1 | 4 | 259 | 69 | 328 | 9.74e-90 | 279 |
| Msa0369590 | MtrunA17_Chr5g0437791 | 59.740 | 77 | 27 | 2 | 86 | 162 | 30 | 102 | 5.50e-22 | 87.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0369590 | AT5G34930.3 | 54.717 | 265 | 116 | 1 | 8 | 268 | 345 | 609 | 1.83e-97 | 298 |
| Msa0369590 | AT5G34930.3 | 50.763 | 262 | 123 | 2 | 2 | 257 | 27 | 288 | 6.22e-87 | 271 |
| Msa0369590 | AT5G34930.1 | 54.717 | 265 | 116 | 1 | 8 | 268 | 365 | 629 | 2.84e-97 | 298 |
| Msa0369590 | AT5G34930.1 | 50.763 | 262 | 123 | 2 | 2 | 257 | 47 | 308 | 8.83e-87 | 271 |
| Msa0369590 | AT5G34930.2 | 54.717 | 265 | 116 | 1 | 8 | 268 | 387 | 651 | 5.67e-97 | 298 |
| Msa0369590 | AT5G34930.2 | 50.763 | 262 | 123 | 2 | 2 | 257 | 69 | 330 | 1.67e-86 | 271 |
| Msa0369590 | AT1G15710.1 | 50.903 | 277 | 122 | 2 | 5 | 267 | 56 | 332 | 1.06e-93 | 280 |
Find 66 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCAACTCTCAGTTCTTTC+TGG | 0.113081 | 3_1:+66931856 | None:intergenic |
| AGTGGTACCACTCATTTATT+AGG | 0.177296 | 3_1:+66933748 | None:intergenic |
| AATCTGAAAATTGGCATAGT+TGG | 0.302197 | 3_1:-66933609 | Msa0369590:CDS |
| ATAGTTGGGTTTGGCACCTT+TGG | 0.310406 | 3_1:-66933594 | Msa0369590:CDS |
| TCTGTCCTTCATCCATCCTT+TGG | 0.322800 | 3_1:+66931881 | None:intergenic |
| CTCTGCACGCACCCAATGTT+TGG | 0.327568 | 3_1:-66933067 | Msa0369590:CDS |
| CTCTCAACTTTGTCACCAAA+TGG | 0.332240 | 3_1:-66933505 | Msa0369590:CDS |
| GTTTGACAAAGTTCGAATAA+AGG | 0.337204 | 3_1:-66933002 | Msa0369590:CDS |
| ATCAACTCTCAGTTCTTTCT+GGG | 0.348008 | 3_1:+66931857 | None:intergenic |
| TACCAGGACATTGGCAGAAA+TGG | 0.349615 | 3_1:-66932334 | Msa0369590:intron |
| ATTGCATGTAATTGAACATA+TGG | 0.361459 | 3_1:+66931761 | None:intergenic |
| ATCTGAAAATTGGCATAGTT+GGG | 0.368892 | 3_1:-66933608 | Msa0369590:CDS |
| CACTTACTGGTCCAAACATT+GGG | 0.370839 | 3_1:+66933056 | None:intergenic |
| AAAATTGGCATAGTTGGGTT+TGG | 0.391343 | 3_1:-66933603 | Msa0369590:CDS |
| CATCGCTATCCGAGGTTGTC+GGG | 0.411275 | 3_1:-66933316 | Msa0369590:CDS |
| TGAAAGCCCTTGGTGTCAAT+AGG | 0.419293 | 3_1:+66932297 | None:intergenic |
| AAATGGGAATCCATTTCTTC+AGG | 0.426562 | 3_1:-66933488 | Msa0369590:intron |
| TGAAGAAATGGATTCCCATT+TGG | 0.428244 | 3_1:+66933490 | None:intergenic |
| GTGGTACCACTCATTTATTA+GGG | 0.431285 | 3_1:+66933749 | None:intergenic |
| TACTAGTCGCAGTTAGAGTA+TGG | 0.435850 | 3_1:+66933538 | None:intergenic |
| CAATTTATCACACACACAAT+AGG | 0.447265 | 3_1:-66932449 | Msa0369590:CDS |
| TCATCGCTATCCGAGGTTGT+CGG | 0.470039 | 3_1:-66933317 | Msa0369590:CDS |
| CCACTTACTGGTCCAAACAT+TGG | 0.470749 | 3_1:+66933055 | None:intergenic |
| GTAGTTCCATACCTCTTGTC+TGG | 0.478409 | 3_1:+66932057 | None:intergenic |
| AACAAGTGTTTGAAAGCCCT+TGG | 0.482288 | 3_1:+66932287 | None:intergenic |
| TCTCAACTTTGTCACCAAAT+GGG | 0.483713 | 3_1:-66933504 | Msa0369590:CDS |
| TTAACATATAACTAGAAACT+AGG | 0.491644 | 3_1:-66933795 | Msa0369590:five_prime_UTR |
| CTTTCAAACACTTGTTGAGT+TGG | 0.496461 | 3_1:-66932280 | Msa0369590:intron |
| CAGAGTATGTCTGACTCCTC+TGG | 0.506724 | 3_1:+66933085 | None:intergenic |
| TTTATGTGGAAGACATATGA+AGG | 0.512031 | 3_1:-66931819 | Msa0369590:three_prime_UTR |
| TATATGTTAAGAAAGCTGAT+TGG | 0.520523 | 3_1:+66933808 | None:intergenic |
| CCAATGTTTGGACCAGTAAG+TGG | 0.526935 | 3_1:-66933055 | Msa0369590:CDS |
| CATGTAATTGAACATATGGC+AGG | 0.535284 | 3_1:+66931765 | None:intergenic |
| AGTGCAAAATATGAGAGGAA+TGG | 0.557615 | 3_1:+66933687 | None:intergenic |
| AGAGATGCTCGTCCAAAGGA+TGG | 0.559893 | 3_1:-66931893 | Msa0369590:CDS |
| TCAAAACTACATCCCATGAC+AGG | 0.560237 | 3_1:+66932115 | None:intergenic |
| ATCTATTTCATCGCTATCCG+AGG | 0.562582 | 3_1:-66933324 | Msa0369590:CDS |
| TGTCTTCTTTACCAGGACAT+TGG | 0.566328 | 3_1:-66932343 | Msa0369590:intron |
| TAACATATAACTAGAAACTA+GGG | 0.571449 | 3_1:-66933794 | Msa0369590:five_prime_UTR |
| CTATTATAAGTAAAATAAAG+TGG | 0.572135 | 3_1:+66933730 | None:intergenic |
| GCCCTTGGTGTCAATAGGAG+TGG | 0.573317 | 3_1:+66932302 | None:intergenic |
| TGACATCCATGTCAGCATCA+AGG | 0.575560 | 3_1:+66933360 | None:intergenic |
| AAGCTGATTGGCACAGATAG+CGG | 0.575610 | 3_1:+66933820 | None:intergenic |
| CAACAGATTCGCCAGACAAG+AGG | 0.581617 | 3_1:-66932068 | Msa0369590:intron |
| ATGTAATTGAACATATGGCA+GGG | 0.588910 | 3_1:+66931766 | None:intergenic |
| CTCGTCCAAAGGATGGATGA+AGG | 0.595189 | 3_1:-66931886 | Msa0369590:CDS |
| TCCACTCCTATTGACACCAA+GGG | 0.597030 | 3_1:-66932303 | Msa0369590:CDS |
| AGCATTCCTTGATGCTGACA+TGG | 0.601227 | 3_1:-66933366 | Msa0369590:CDS |
| AAGCAAAAGTAAGAATGTGA+AGG | 0.608129 | 3_1:-66933853 | Msa0369590:five_prime_UTR |
| TCAAAGAGATGCTCGTCCAA+AGG | 0.613412 | 3_1:-66931897 | Msa0369590:CDS |
| AATGTTTAAGGTGTTGCCAG+AGG | 0.615939 | 3_1:-66933101 | Msa0369590:intron |
| ATCCACTCCTATTGACACCA+AGG | 0.624628 | 3_1:-66932304 | Msa0369590:CDS |
| TGTAATTGAACATATGGCAG+GGG | 0.626852 | 3_1:+66931767 | None:intergenic |
| GCAAATACAATGATTAAACA+AGG | 0.628541 | 3_1:-66933561 | Msa0369590:CDS |
| AAATAAGTGCAAAATATGAG+AGG | 0.631671 | 3_1:+66933682 | None:intergenic |
| TGGCATCGACCCGACAACCT+CGG | 0.632244 | 3_1:+66933307 | None:intergenic |
| TGTTATGTAGGGTTGCAAGA+TGG | 0.634686 | 3_1:-66932516 | Msa0369590:intron |
| TCTAACTGCGACTAGTAGAA+CGG | 0.635647 | 3_1:-66933532 | Msa0369590:CDS |
| GATGGTAGAAATGTCATGTG+AGG | 0.648865 | 3_1:-66932498 | Msa0369590:CDS |
| CAATGTTTGGACCAGTAAGT+GGG | 0.651849 | 3_1:-66933054 | Msa0369590:CDS |
| AAATATGAGAGGAATGGATG+TGG | 0.655607 | 3_1:+66933693 | None:intergenic |
| TTATTAGGGTGATGACAACA+AGG | 0.655862 | 3_1:+66933763 | None:intergenic |
| TTATCACACACACAATAGGA+AGG | 0.661349 | 3_1:-66932445 | Msa0369590:intron |
| CATATGGCAGGGGTTACAAG+AGG | 0.661861 | 3_1:+66931777 | None:intergenic |
| TCATCACCCTAATAAATGAG+TGG | 0.668420 | 3_1:-66933755 | Msa0369590:five_prime_UTR |
| GGTCGCTTCAGACAAGCGAG+TGG | 0.711069 | 3_1:+66933287 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTATTATAAGTAAAATAAAG+TGG | + | chr3_1:66931834-66931853 | None:intergenic | 15.0% |
| !!! | CACTTTATTTTACTTATAAT+AGG | - | chr3_1:66931832-66931851 | Msa0369590:three_prime_UTR | 15.0% |
| !! | TTTATATTAGTATCACTTTA+AGG | - | chr3_1:66932758-66932777 | Msa0369590:intron | 15.0% |
| !! | AACATAACTAATTAAAGTAA+GGG | + | chr3_1:66932942-66932961 | None:intergenic | 15.0% |
| !! | CTATTATAAGTAAAATAAAG+TGG | + | chr3_1:66931834-66931853 | None:intergenic | 15.0% |
| !!! | CACTTTATTTTACTTATAAT+AGG | - | chr3_1:66931832-66931851 | Msa0369590:three_prime_UTR | 15.0% |
| !! | TTTATATTAGTATCACTTTA+AGG | - | chr3_1:66932758-66932777 | Msa0369590:intron | 15.0% |
| !! | AACATAACTAATTAAAGTAA+GGG | + | chr3_1:66932942-66932961 | None:intergenic | 15.0% |
| !! | TTAACATATAACTAGAAACT+AGG | - | chr3_1:66931766-66931785 | Msa0369590:three_prime_UTR | 20.0% |
| !! | TAACATATAACTAGAAACTA+GGG | - | chr3_1:66931767-66931786 | Msa0369590:three_prime_UTR | 20.0% |
| !! | ATATACATGCATTATGAAAT+GGG | + | chr3_1:66932152-66932171 | None:intergenic | 20.0% |
| !! | GAACATAACTAATTAAAGTA+AGG | + | chr3_1:66932943-66932962 | None:intergenic | 20.0% |
| !! | AATTATAAAAAATATGCAGC+TGG | - | chr3_1:66933614-66933633 | Msa0369590:CDS | 20.0% |
| !! | TTAACATATAACTAGAAACT+AGG | - | chr3_1:66931766-66931785 | Msa0369590:three_prime_UTR | 20.0% |
| !! | TAACATATAACTAGAAACTA+GGG | - | chr3_1:66931767-66931786 | Msa0369590:three_prime_UTR | 20.0% |
| !! | ATATACATGCATTATGAAAT+GGG | + | chr3_1:66932152-66932171 | None:intergenic | 20.0% |
| !! | GAACATAACTAATTAAAGTA+AGG | + | chr3_1:66932943-66932962 | None:intergenic | 20.0% |
| !! | AATTATAAAAAATATGCAGC+TGG | - | chr3_1:66933614-66933633 | Msa0369590:CDS | 20.0% |
| ! | TATATGTTAAGAAAGCTGAT+TGG | + | chr3_1:66931756-66931775 | None:intergenic | 25.0% |
| ! | AAATAAGTGCAAAATATGAG+AGG | + | chr3_1:66931882-66931901 | None:intergenic | 25.0% |
| ! | TCTTCCAAAAATCTGAAAAT+TGG | - | chr3_1:66931943-66931962 | Msa0369590:intron | 25.0% |
| !! | TATGCCAATTTTCAGATTTT+TGG | + | chr3_1:66931950-66931969 | None:intergenic | 25.0% |
| ! | TCATTGTATTTGCCAAAAAT+TGG | + | chr3_1:66931993-66932012 | None:intergenic | 25.0% |
| ! | GCAAATACAATGATTAAACA+AGG | - | chr3_1:66932000-66932019 | Msa0369590:intron | 25.0% |
| ! | CATATACATGCATTATGAAA+TGG | + | chr3_1:66932153-66932172 | None:intergenic | 25.0% |
| !! | CTTTTAATAGAAGGTTCTTT+GGG | + | chr3_1:66932336-66932355 | None:intergenic | 25.0% |
| !! | ACTTTTAATAGAAGGTTCTT+TGG | + | chr3_1:66932337-66932356 | None:intergenic | 25.0% |
| !! | AACTGCATACTTTTAATAGA+AGG | + | chr3_1:66932345-66932364 | None:intergenic | 25.0% |
| !! | AATTGATGTAGTTTCTGTTT+TGG | - | chr3_1:66932419-66932438 | Msa0369590:intron | 25.0% |
| ! | CTTAAACATTAAAGTCACAT+AGG | + | chr3_1:66932450-66932469 | None:intergenic | 25.0% |
| ! | CTATGTGACTTTAATGTTTA+AGG | - | chr3_1:66932448-66932467 | Msa0369590:CDS | 25.0% |
| ! | TTACCTCACTTTCAAAAATT+TGG | + | chr3_1:66932610-66932629 | None:intergenic | 25.0% |
| ! | TCAACAAGATTAGCATAATT+AGG | + | chr3_1:66932678-66932697 | None:intergenic | 25.0% |
| ! | TGTTGAATAAAGAAACAAAG+TGG | - | chr3_1:66932692-66932711 | Msa0369590:intron | 25.0% |
| !! | TTAGTATCACTTTAAGGAAA+AGG | - | chr3_1:66932764-66932783 | Msa0369590:intron | 25.0% |
| !!! | TCACTTTTAGATTCTTAACA+AGG | - | chr3_1:66932900-66932919 | Msa0369590:intron | 25.0% |
| !! | CACTTTTAGATTCTTAACAA+GGG | - | chr3_1:66932901-66932920 | Msa0369590:intron | 25.0% |
| ! | TGATAAAACAAAATGAGCTA+AGG | - | chr3_1:66932985-66933004 | Msa0369590:CDS | 25.0% |
| ! | TTCACAATATTGTGTTATGT+AGG | - | chr3_1:66933033-66933052 | Msa0369590:CDS | 25.0% |
| ! | TCACAATATTGTGTTATGTA+GGG | - | chr3_1:66933034-66933053 | Msa0369590:CDS | 25.0% |
| !! | GTTTTACTGTAACATATTTC+TGG | + | chr3_1:66933547-66933566 | None:intergenic | 25.0% |
| ! | ATTGCATGTAATTGAACATA+TGG | + | chr3_1:66933803-66933822 | None:intergenic | 25.0% |
| ! | TATATGTTAAGAAAGCTGAT+TGG | + | chr3_1:66931756-66931775 | None:intergenic | 25.0% |
| ! | AAATAAGTGCAAAATATGAG+AGG | + | chr3_1:66931882-66931901 | None:intergenic | 25.0% |
| ! | TCTTCCAAAAATCTGAAAAT+TGG | - | chr3_1:66931943-66931962 | Msa0369590:intron | 25.0% |
| !! | TATGCCAATTTTCAGATTTT+TGG | + | chr3_1:66931950-66931969 | None:intergenic | 25.0% |
| ! | TCATTGTATTTGCCAAAAAT+TGG | + | chr3_1:66931993-66932012 | None:intergenic | 25.0% |
| ! | GCAAATACAATGATTAAACA+AGG | - | chr3_1:66932000-66932019 | Msa0369590:intron | 25.0% |
| ! | CATATACATGCATTATGAAA+TGG | + | chr3_1:66932153-66932172 | None:intergenic | 25.0% |
| !! | CTTTTAATAGAAGGTTCTTT+GGG | + | chr3_1:66932336-66932355 | None:intergenic | 25.0% |
| !! | ACTTTTAATAGAAGGTTCTT+TGG | + | chr3_1:66932337-66932356 | None:intergenic | 25.0% |
| !! | AACTGCATACTTTTAATAGA+AGG | + | chr3_1:66932345-66932364 | None:intergenic | 25.0% |
| !! | AATTGATGTAGTTTCTGTTT+TGG | - | chr3_1:66932419-66932438 | Msa0369590:intron | 25.0% |
| ! | CTTAAACATTAAAGTCACAT+AGG | + | chr3_1:66932450-66932469 | None:intergenic | 25.0% |
| ! | CTATGTGACTTTAATGTTTA+AGG | - | chr3_1:66932448-66932467 | Msa0369590:CDS | 25.0% |
| ! | TTACCTCACTTTCAAAAATT+TGG | + | chr3_1:66932610-66932629 | None:intergenic | 25.0% |
| ! | TCAACAAGATTAGCATAATT+AGG | + | chr3_1:66932678-66932697 | None:intergenic | 25.0% |
| ! | TGTTGAATAAAGAAACAAAG+TGG | - | chr3_1:66932692-66932711 | Msa0369590:intron | 25.0% |
| !! | TTAGTATCACTTTAAGGAAA+AGG | - | chr3_1:66932764-66932783 | Msa0369590:intron | 25.0% |
| !!! | TCACTTTTAGATTCTTAACA+AGG | - | chr3_1:66932900-66932919 | Msa0369590:intron | 25.0% |
| !! | CACTTTTAGATTCTTAACAA+GGG | - | chr3_1:66932901-66932920 | Msa0369590:intron | 25.0% |
| ! | TGATAAAACAAAATGAGCTA+AGG | - | chr3_1:66932985-66933004 | Msa0369590:CDS | 25.0% |
| ! | TTCACAATATTGTGTTATGT+AGG | - | chr3_1:66933033-66933052 | Msa0369590:CDS | 25.0% |
| ! | TCACAATATTGTGTTATGTA+GGG | - | chr3_1:66933034-66933053 | Msa0369590:CDS | 25.0% |
| !! | GTTTTACTGTAACATATTTC+TGG | + | chr3_1:66933547-66933566 | None:intergenic | 25.0% |
| ! | ATTGCATGTAATTGAACATA+TGG | + | chr3_1:66933803-66933822 | None:intergenic | 25.0% |
| AAGCAAAAGTAAGAATGTGA+AGG | - | chr3_1:66931708-66931727 | Msa0369590:three_prime_UTR | 30.0% | |
| !! | ATTTTTGGAAGATGATGACA+TGG | + | chr3_1:66931935-66931954 | None:intergenic | 30.0% |
| AATCTGAAAATTGGCATAGT+TGG | - | chr3_1:66931952-66931971 | Msa0369590:intron | 30.0% | |
| ATCTGAAAATTGGCATAGTT+GGG | - | chr3_1:66931953-66931972 | Msa0369590:intron | 30.0% | |
| ! | TGAGTTTTTACCTGAAGAAA+TGG | + | chr3_1:66932086-66932105 | None:intergenic | 30.0% |
| ATGTATATGATATGCAAGCT+TGG | + | chr3_1:66932112-66932131 | None:intergenic | 30.0% | |
| !! | AAACAAAAGTGCTATCACTA+TGG | + | chr3_1:66932382-66932401 | None:intergenic | 30.0% |
| GTTTGACAAAGTTCGAATAA+AGG | - | chr3_1:66932559-66932578 | Msa0369590:intron | 30.0% | |
| !! | TCTCCAAATTTTTGAAAGTG+AGG | - | chr3_1:66932604-66932623 | Msa0369590:intron | 30.0% |
| ATTGTGAAATAGATCTAGCT+TGG | + | chr3_1:66933021-66933040 | None:intergenic | 30.0% | |
| CAATTTATCACACACACAAT+AGG | - | chr3_1:66933112-66933131 | Msa0369590:intron | 30.0% | |
| GAAAGATTTAGGAGGAATTA+GGG | + | chr3_1:66933343-66933362 | None:intergenic | 30.0% | |
| AGAAAGATTTAGGAGGAATT+AGG | + | chr3_1:66933344-66933363 | None:intergenic | 30.0% | |
| AGAAAAGAGAAAGATTTAGG+AGG | + | chr3_1:66933351-66933370 | None:intergenic | 30.0% | |
| AGCAGAAAAGAGAAAGATTT+AGG | + | chr3_1:66933354-66933373 | None:intergenic | 30.0% | |
| ! | TTTTCTGCTTTAACCTCAAA+TGG | - | chr3_1:66933365-66933384 | Msa0369590:CDS | 30.0% |
| GCATATACTATATCCATTTG+AGG | + | chr3_1:66933381-66933400 | None:intergenic | 30.0% | |
| GGATATAGTATATGCTATCA+TGG | - | chr3_1:66933386-66933405 | Msa0369590:intron | 30.0% | |
| TCTGGAAATAAGAATTTCAC+CGG | + | chr3_1:66933529-66933548 | None:intergenic | 30.0% | |
| TTTATGTGGAAGACATATGA+AGG | - | chr3_1:66933742-66933761 | Msa0369590:five_prime_UTR | 30.0% | |
| ATGTAATTGAACATATGGCA+GGG | + | chr3_1:66933798-66933817 | None:intergenic | 30.0% | |
| AAGCAAAAGTAAGAATGTGA+AGG | - | chr3_1:66931708-66931727 | Msa0369590:three_prime_UTR | 30.0% | |
| !! | ATTTTTGGAAGATGATGACA+TGG | + | chr3_1:66931935-66931954 | None:intergenic | 30.0% |
| AATCTGAAAATTGGCATAGT+TGG | - | chr3_1:66931952-66931971 | Msa0369590:intron | 30.0% | |
| ATCTGAAAATTGGCATAGTT+GGG | - | chr3_1:66931953-66931972 | Msa0369590:intron | 30.0% | |
| ! | TGAGTTTTTACCTGAAGAAA+TGG | + | chr3_1:66932086-66932105 | None:intergenic | 30.0% |
| ATGTATATGATATGCAAGCT+TGG | + | chr3_1:66932112-66932131 | None:intergenic | 30.0% | |
| !! | AAACAAAAGTGCTATCACTA+TGG | + | chr3_1:66932382-66932401 | None:intergenic | 30.0% |
| GTTTGACAAAGTTCGAATAA+AGG | - | chr3_1:66932559-66932578 | Msa0369590:intron | 30.0% | |
| !! | TCTCCAAATTTTTGAAAGTG+AGG | - | chr3_1:66932604-66932623 | Msa0369590:intron | 30.0% |
| ATTGTGAAATAGATCTAGCT+TGG | + | chr3_1:66933021-66933040 | None:intergenic | 30.0% | |
| CAATTTATCACACACACAAT+AGG | - | chr3_1:66933112-66933131 | Msa0369590:intron | 30.0% | |
| GAAAGATTTAGGAGGAATTA+GGG | + | chr3_1:66933343-66933362 | None:intergenic | 30.0% | |
| AGAAAGATTTAGGAGGAATT+AGG | + | chr3_1:66933344-66933363 | None:intergenic | 30.0% | |
| AGAAAAGAGAAAGATTTAGG+AGG | + | chr3_1:66933351-66933370 | None:intergenic | 30.0% | |
| AGCAGAAAAGAGAAAGATTT+AGG | + | chr3_1:66933354-66933373 | None:intergenic | 30.0% | |
| ! | TTTTCTGCTTTAACCTCAAA+TGG | - | chr3_1:66933365-66933384 | Msa0369590:CDS | 30.0% |
| GCATATACTATATCCATTTG+AGG | + | chr3_1:66933381-66933400 | None:intergenic | 30.0% | |
| GGATATAGTATATGCTATCA+TGG | - | chr3_1:66933386-66933405 | Msa0369590:intron | 30.0% | |
| TCTGGAAATAAGAATTTCAC+CGG | + | chr3_1:66933529-66933548 | None:intergenic | 30.0% | |
| TTTATGTGGAAGACATATGA+AGG | - | chr3_1:66933742-66933761 | Msa0369590:five_prime_UTR | 30.0% | |
| ATGTAATTGAACATATGGCA+GGG | + | chr3_1:66933798-66933817 | None:intergenic | 30.0% | |
| TTATTAGGGTGATGACAACA+AGG | + | chr3_1:66931801-66931820 | None:intergenic | 35.0% | |
| TCATCACCCTAATAAATGAG+TGG | - | chr3_1:66931806-66931825 | Msa0369590:three_prime_UTR | 35.0% | |
| GTGGTACCACTCATTTATTA+GGG | + | chr3_1:66931815-66931834 | None:intergenic | 35.0% | |
| AGTGGTACCACTCATTTATT+AGG | + | chr3_1:66931816-66931835 | None:intergenic | 35.0% | |
| AAATATGAGAGGAATGGATG+TGG | + | chr3_1:66931871-66931890 | None:intergenic | 35.0% | |
| AGTGCAAAATATGAGAGGAA+TGG | + | chr3_1:66931877-66931896 | None:intergenic | 35.0% | |
| AAAATTGGCATAGTTGGGTT+TGG | - | chr3_1:66931958-66931977 | Msa0369590:intron | 35.0% | |
| ATTTGCCAAAAATTGGCCAA+AGG | + | chr3_1:66931986-66932005 | None:intergenic | 35.0% | |
| TCTCAACTTTGTCACCAAAT+GGG | - | chr3_1:66932057-66932076 | Msa0369590:intron | 35.0% | |
| ! | TGAAGAAATGGATTCCCATT+TGG | + | chr3_1:66932074-66932093 | None:intergenic | 35.0% |
| AAATGGGAATCCATTTCTTC+AGG | - | chr3_1:66932073-66932092 | Msa0369590:CDS | 35.0% | |
| ATGTATATGTCAAACTCTGC+AGG | - | chr3_1:66932164-66932183 | Msa0369590:intron | 35.0% | |
| TGTATATGTCAAACTCTGCA+GGG | - | chr3_1:66932165-66932184 | Msa0369590:intron | 35.0% | |
| ! | AGAACATCAACAAAAAGCGT+TGG | + | chr3_1:66932298-66932317 | None:intergenic | 35.0% |
| TTCCTTAACAAGTGCTCTAA+GGG | + | chr3_1:66932798-66932817 | None:intergenic | 35.0% | |
| TTATCACACACACAATAGGA+AGG | - | chr3_1:66933116-66933135 | Msa0369590:intron | 35.0% | |
| ! | CTTTCAAACACTTGTTGAGT+TGG | - | chr3_1:66933281-66933300 | Msa0369590:CDS | 35.0% |
| ATTGCAGAAAAAACCTGTCA+TGG | - | chr3_1:66933433-66933452 | Msa0369590:intron | 35.0% | |
| TTGCAGAAAAAACCTGTCAT+GGG | - | chr3_1:66933434-66933453 | Msa0369590:intron | 35.0% | |
| !!! | TGTAGTTTTGATCTGTACAG+TGG | - | chr3_1:66933458-66933477 | Msa0369590:intron | 35.0% |
| TTTATGAGTCTGTCTTGACT+TGG | + | chr3_1:66933596-66933615 | None:intergenic | 35.0% | |
| ATCAACTCTCAGTTCTTTCT+GGG | + | chr3_1:66933707-66933726 | None:intergenic | 35.0% | |
| TATCAACTCTCAGTTCTTTC+TGG | + | chr3_1:66933708-66933727 | None:intergenic | 35.0% | |
| ! | GTGATACACAACGTTTTATG+TGG | - | chr3_1:66933728-66933747 | Msa0369590:five_prime_UTR | 35.0% |
| TGTAATTGAACATATGGCAG+GGG | + | chr3_1:66933797-66933816 | None:intergenic | 35.0% | |
| CATGTAATTGAACATATGGC+AGG | + | chr3_1:66933799-66933818 | None:intergenic | 35.0% | |
| TTATTAGGGTGATGACAACA+AGG | + | chr3_1:66931801-66931820 | None:intergenic | 35.0% | |
| TCATCACCCTAATAAATGAG+TGG | - | chr3_1:66931806-66931825 | Msa0369590:three_prime_UTR | 35.0% | |
| GTGGTACCACTCATTTATTA+GGG | + | chr3_1:66931815-66931834 | None:intergenic | 35.0% | |
| AGTGGTACCACTCATTTATT+AGG | + | chr3_1:66931816-66931835 | None:intergenic | 35.0% | |
| AAATATGAGAGGAATGGATG+TGG | + | chr3_1:66931871-66931890 | None:intergenic | 35.0% | |
| AGTGCAAAATATGAGAGGAA+TGG | + | chr3_1:66931877-66931896 | None:intergenic | 35.0% | |
| AAAATTGGCATAGTTGGGTT+TGG | - | chr3_1:66931958-66931977 | Msa0369590:intron | 35.0% | |
| ATTTGCCAAAAATTGGCCAA+AGG | + | chr3_1:66931986-66932005 | None:intergenic | 35.0% | |
| TCTCAACTTTGTCACCAAAT+GGG | - | chr3_1:66932057-66932076 | Msa0369590:intron | 35.0% | |
| ! | TGAAGAAATGGATTCCCATT+TGG | + | chr3_1:66932074-66932093 | None:intergenic | 35.0% |
| AAATGGGAATCCATTTCTTC+AGG | - | chr3_1:66932073-66932092 | Msa0369590:CDS | 35.0% | |
| ATGTATATGTCAAACTCTGC+AGG | - | chr3_1:66932164-66932183 | Msa0369590:intron | 35.0% | |
| TGTATATGTCAAACTCTGCA+GGG | - | chr3_1:66932165-66932184 | Msa0369590:intron | 35.0% | |
| ! | AGAACATCAACAAAAAGCGT+TGG | + | chr3_1:66932298-66932317 | None:intergenic | 35.0% |
| TTCCTTAACAAGTGCTCTAA+GGG | + | chr3_1:66932798-66932817 | None:intergenic | 35.0% | |
| TTATCACACACACAATAGGA+AGG | - | chr3_1:66933116-66933135 | Msa0369590:intron | 35.0% | |
| ! | CTTTCAAACACTTGTTGAGT+TGG | - | chr3_1:66933281-66933300 | Msa0369590:CDS | 35.0% |
| ATTGCAGAAAAAACCTGTCA+TGG | - | chr3_1:66933433-66933452 | Msa0369590:intron | 35.0% | |
| TTGCAGAAAAAACCTGTCAT+GGG | - | chr3_1:66933434-66933453 | Msa0369590:intron | 35.0% | |
| !!! | TGTAGTTTTGATCTGTACAG+TGG | - | chr3_1:66933458-66933477 | Msa0369590:intron | 35.0% |
| TTTATGAGTCTGTCTTGACT+TGG | + | chr3_1:66933596-66933615 | None:intergenic | 35.0% | |
| ATCAACTCTCAGTTCTTTCT+GGG | + | chr3_1:66933707-66933726 | None:intergenic | 35.0% | |
| TATCAACTCTCAGTTCTTTC+TGG | + | chr3_1:66933708-66933727 | None:intergenic | 35.0% | |
| ! | GTGATACACAACGTTTTATG+TGG | - | chr3_1:66933728-66933747 | Msa0369590:five_prime_UTR | 35.0% |
| TGTAATTGAACATATGGCAG+GGG | + | chr3_1:66933797-66933816 | None:intergenic | 35.0% | |
| CATGTAATTGAACATATGGC+AGG | + | chr3_1:66933799-66933818 | None:intergenic | 35.0% | |
| TACTAGTCGCAGTTAGAGTA+TGG | + | chr3_1:66932026-66932045 | None:intergenic | 40.0% | |
| TCTAACTGCGACTAGTAGAA+CGG | - | chr3_1:66932029-66932048 | Msa0369590:intron | 40.0% | |
| CTCTCAACTTTGTCACCAAA+TGG | - | chr3_1:66932056-66932075 | Msa0369590:intron | 40.0% | |
| ATCTATTTCATCGCTATCCG+AGG | - | chr3_1:66932237-66932256 | Msa0369590:intron | 40.0% | |
| !! | AATGTTTAAGGTGTTGCCAG+AGG | - | chr3_1:66932460-66932479 | Msa0369590:CDS | 40.0% |
| CACTTACTGGTCCAAACATT+GGG | + | chr3_1:66932508-66932527 | None:intergenic | 40.0% | |
| CAATGTTTGGACCAGTAAGT+GGG | - | chr3_1:66932507-66932526 | Msa0369590:CDS | 40.0% | |
| CTTCCTTAACAAGTGCTCTA+AGG | + | chr3_1:66932799-66932818 | None:intergenic | 40.0% | |
| ! | TAGATCTAGCTTGGAACTTG+TGG | + | chr3_1:66933012-66933031 | None:intergenic | 40.0% |
| TGTTATGTAGGGTTGCAAGA+TGG | - | chr3_1:66933045-66933064 | Msa0369590:CDS | 40.0% | |
| GATGGTAGAAATGTCATGTG+AGG | - | chr3_1:66933063-66933082 | Msa0369590:CDS | 40.0% | |
| CAGACAAGCACCTGAATTTA+CGG | - | chr3_1:66933175-66933194 | Msa0369590:intron | 40.0% | |
| !!! | CTTTTGGTGTCTTCTTTACC+AGG | - | chr3_1:66933211-66933230 | Msa0369590:intron | 40.0% |
| TGTCTTCTTTACCAGGACAT+TGG | - | chr3_1:66933218-66933237 | Msa0369590:intron | 40.0% | |
| AACAAGTGTTTGAAAGCCCT+TGG | + | chr3_1:66933277-66933296 | None:intergenic | 40.0% | |
| TCAAAACTACATCCCATGAC+AGG | + | chr3_1:66933449-66933468 | None:intergenic | 40.0% | |
| TACTAGTCGCAGTTAGAGTA+TGG | + | chr3_1:66932026-66932045 | None:intergenic | 40.0% | |
| TCTAACTGCGACTAGTAGAA+CGG | - | chr3_1:66932029-66932048 | Msa0369590:intron | 40.0% | |
| CTCTCAACTTTGTCACCAAA+TGG | - | chr3_1:66932056-66932075 | Msa0369590:intron | 40.0% | |
| ATCTATTTCATCGCTATCCG+AGG | - | chr3_1:66932237-66932256 | Msa0369590:intron | 40.0% | |
| !! | AATGTTTAAGGTGTTGCCAG+AGG | - | chr3_1:66932460-66932479 | Msa0369590:CDS | 40.0% |
| CACTTACTGGTCCAAACATT+GGG | + | chr3_1:66932508-66932527 | None:intergenic | 40.0% | |
| CAATGTTTGGACCAGTAAGT+GGG | - | chr3_1:66932507-66932526 | Msa0369590:CDS | 40.0% | |
| CTTCCTTAACAAGTGCTCTA+AGG | + | chr3_1:66932799-66932818 | None:intergenic | 40.0% | |
| ! | TAGATCTAGCTTGGAACTTG+TGG | + | chr3_1:66933012-66933031 | None:intergenic | 40.0% |
| TGTTATGTAGGGTTGCAAGA+TGG | - | chr3_1:66933045-66933064 | Msa0369590:CDS | 40.0% | |
| GATGGTAGAAATGTCATGTG+AGG | - | chr3_1:66933063-66933082 | Msa0369590:CDS | 40.0% | |
| CAGACAAGCACCTGAATTTA+CGG | - | chr3_1:66933175-66933194 | Msa0369590:intron | 40.0% | |
| !!! | CTTTTGGTGTCTTCTTTACC+AGG | - | chr3_1:66933211-66933230 | Msa0369590:intron | 40.0% |
| TGTCTTCTTTACCAGGACAT+TGG | - | chr3_1:66933218-66933237 | Msa0369590:intron | 40.0% | |
| AACAAGTGTTTGAAAGCCCT+TGG | + | chr3_1:66933277-66933296 | None:intergenic | 40.0% | |
| TCAAAACTACATCCCATGAC+AGG | + | chr3_1:66933449-66933468 | None:intergenic | 40.0% | |
| AAGCTGATTGGCACAGATAG+CGG | + | chr3_1:66931744-66931763 | None:intergenic | 45.0% | |
| ATAGTTGGGTTTGGCACCTT+TGG | - | chr3_1:66931967-66931986 | Msa0369590:intron | 45.0% | |
| ! | TGGCACCTTTGGCCAATTTT+TGG | - | chr3_1:66931978-66931997 | Msa0369590:intron | 45.0% |
| AGCATTCCTTGATGCTGACA+TGG | - | chr3_1:66932195-66932214 | Msa0369590:intron | 45.0% | |
| TGACATCCATGTCAGCATCA+AGG | + | chr3_1:66932204-66932223 | None:intergenic | 45.0% | |
| CCACTTACTGGTCCAAACAT+TGG | + | chr3_1:66932509-66932528 | None:intergenic | 45.0% | |
| CCAATGTTTGGACCAGTAAG+TGG | - | chr3_1:66932506-66932525 | Msa0369590:CDS | 45.0% | |
| GGACCAGTAAGTGGGAAAAA+CGG | - | chr3_1:66932515-66932534 | Msa0369590:intron | 45.0% | |
| !! | CAACCGTTTTTCCCACTTAC+TGG | + | chr3_1:66932521-66932540 | None:intergenic | 45.0% |
| CAGTAAGTGGGAAAAACGGT+TGG | - | chr3_1:66932519-66932538 | Msa0369590:intron | 45.0% | |
| ! | TGCCCTTAGAGCACTTGTTA+AGG | - | chr3_1:66932793-66932812 | Msa0369590:intron | 45.0% |
| !! | CTGGTTGGTGAAAGATAGGT+AGG | + | chr3_1:66933152-66933171 | None:intergenic | 45.0% |
| !! | GTCTCTGGTTGGTGAAAGAT+AGG | + | chr3_1:66933156-66933175 | None:intergenic | 45.0% |
| CAGTCAGTAGCCGTAAATTC+AGG | + | chr3_1:66933188-66933207 | None:intergenic | 45.0% | |
| !! | CGGCTACTGACTGTAACTTT+TGG | - | chr3_1:66933195-66933214 | Msa0369590:intron | 45.0% |
| TACCAGGACATTGGCAGAAA+TGG | - | chr3_1:66933227-66933246 | Msa0369590:intron | 45.0% | |
| ATCCATTTCTGCCAATGTCC+TGG | + | chr3_1:66933232-66933251 | None:intergenic | 45.0% | |
| ATCCACTCCTATTGACACCA+AGG | - | chr3_1:66933257-66933276 | Msa0369590:CDS | 45.0% | |
| TCCACTCCTATTGACACCAA+GGG | - | chr3_1:66933258-66933277 | Msa0369590:CDS | 45.0% | |
| !! | TGAAAGCCCTTGGTGTCAAT+AGG | + | chr3_1:66933267-66933286 | None:intergenic | 45.0% |
| GTAGTTCCATACCTCTTGTC+TGG | + | chr3_1:66933507-66933526 | None:intergenic | 45.0% | |
| ! | GACAAGAGGTATGGAACTAC+CGG | - | chr3_1:66933507-66933526 | Msa0369590:CDS | 45.0% |
| TCAAAGAGATGCTCGTCCAA+AGG | - | chr3_1:66933664-66933683 | Msa0369590:five_prime_UTR | 45.0% | |
| TCTGTCCTTCATCCATCCTT+TGG | + | chr3_1:66933683-66933702 | None:intergenic | 45.0% | |
| AAGCTGATTGGCACAGATAG+CGG | + | chr3_1:66931744-66931763 | None:intergenic | 45.0% | |
| ATAGTTGGGTTTGGCACCTT+TGG | - | chr3_1:66931967-66931986 | Msa0369590:intron | 45.0% | |
| ! | TGGCACCTTTGGCCAATTTT+TGG | - | chr3_1:66931978-66931997 | Msa0369590:intron | 45.0% |
| AGCATTCCTTGATGCTGACA+TGG | - | chr3_1:66932195-66932214 | Msa0369590:intron | 45.0% | |
| TGACATCCATGTCAGCATCA+AGG | + | chr3_1:66932204-66932223 | None:intergenic | 45.0% | |
| CCACTTACTGGTCCAAACAT+TGG | + | chr3_1:66932509-66932528 | None:intergenic | 45.0% | |
| CCAATGTTTGGACCAGTAAG+TGG | - | chr3_1:66932506-66932525 | Msa0369590:CDS | 45.0% | |
| GGACCAGTAAGTGGGAAAAA+CGG | - | chr3_1:66932515-66932534 | Msa0369590:intron | 45.0% | |
| !! | CAACCGTTTTTCCCACTTAC+TGG | + | chr3_1:66932521-66932540 | None:intergenic | 45.0% |
| CAGTAAGTGGGAAAAACGGT+TGG | - | chr3_1:66932519-66932538 | Msa0369590:intron | 45.0% | |
| ! | TGCCCTTAGAGCACTTGTTA+AGG | - | chr3_1:66932793-66932812 | Msa0369590:intron | 45.0% |
| !! | CTGGTTGGTGAAAGATAGGT+AGG | + | chr3_1:66933152-66933171 | None:intergenic | 45.0% |
| !! | GTCTCTGGTTGGTGAAAGAT+AGG | + | chr3_1:66933156-66933175 | None:intergenic | 45.0% |
| CAGTCAGTAGCCGTAAATTC+AGG | + | chr3_1:66933188-66933207 | None:intergenic | 45.0% | |
| !! | CGGCTACTGACTGTAACTTT+TGG | - | chr3_1:66933195-66933214 | Msa0369590:intron | 45.0% |
| TACCAGGACATTGGCAGAAA+TGG | - | chr3_1:66933227-66933246 | Msa0369590:intron | 45.0% | |
| ATCCATTTCTGCCAATGTCC+TGG | + | chr3_1:66933232-66933251 | None:intergenic | 45.0% | |
| ATCCACTCCTATTGACACCA+AGG | - | chr3_1:66933257-66933276 | Msa0369590:CDS | 45.0% | |
| TCCACTCCTATTGACACCAA+GGG | - | chr3_1:66933258-66933277 | Msa0369590:CDS | 45.0% | |
| !! | TGAAAGCCCTTGGTGTCAAT+AGG | + | chr3_1:66933267-66933286 | None:intergenic | 45.0% |
| GTAGTTCCATACCTCTTGTC+TGG | + | chr3_1:66933507-66933526 | None:intergenic | 45.0% | |
| ! | GACAAGAGGTATGGAACTAC+CGG | - | chr3_1:66933507-66933526 | Msa0369590:CDS | 45.0% |
| TCAAAGAGATGCTCGTCCAA+AGG | - | chr3_1:66933664-66933683 | Msa0369590:five_prime_UTR | 45.0% | |
| TCTGTCCTTCATCCATCCTT+TGG | + | chr3_1:66933683-66933702 | None:intergenic | 45.0% | |
| TCATCGCTATCCGAGGTTGT+CGG | - | chr3_1:66932244-66932263 | Msa0369590:intron | 50.0% | |
| CAGAGTATGTCTGACTCCTC+TGG | + | chr3_1:66932479-66932498 | None:intergenic | 50.0% | |
| TTCAGGTGCTTGTCTGTCTC+TGG | + | chr3_1:66933171-66933190 | None:intergenic | 50.0% | |
| CAACAGATTCGCCAGACAAG+AGG | - | chr3_1:66933493-66933512 | Msa0369590:CDS | 50.0% | |
| GATTCGCCAGACAAGAGGTA+TGG | - | chr3_1:66933498-66933517 | Msa0369590:CDS | 50.0% | |
| AGAGATGCTCGTCCAAAGGA+TGG | - | chr3_1:66933668-66933687 | Msa0369590:five_prime_UTR | 50.0% | |
| CTCGTCCAAAGGATGGATGA+AGG | - | chr3_1:66933675-66933694 | Msa0369590:five_prime_UTR | 50.0% | |
| CATATGGCAGGGGTTACAAG+AGG | + | chr3_1:66933787-66933806 | None:intergenic | 50.0% | |
| TCATCGCTATCCGAGGTTGT+CGG | - | chr3_1:66932244-66932263 | Msa0369590:intron | 50.0% | |
| CAGAGTATGTCTGACTCCTC+TGG | + | chr3_1:66932479-66932498 | None:intergenic | 50.0% | |
| TTCAGGTGCTTGTCTGTCTC+TGG | + | chr3_1:66933171-66933190 | None:intergenic | 50.0% | |
| CAACAGATTCGCCAGACAAG+AGG | - | chr3_1:66933493-66933512 | Msa0369590:CDS | 50.0% | |
| GATTCGCCAGACAAGAGGTA+TGG | - | chr3_1:66933498-66933517 | Msa0369590:CDS | 50.0% | |
| AGAGATGCTCGTCCAAAGGA+TGG | - | chr3_1:66933668-66933687 | Msa0369590:five_prime_UTR | 50.0% | |
| CTCGTCCAAAGGATGGATGA+AGG | - | chr3_1:66933675-66933694 | Msa0369590:five_prime_UTR | 50.0% | |
| CATATGGCAGGGGTTACAAG+AGG | + | chr3_1:66933787-66933806 | None:intergenic | 50.0% | |
| CATCGCTATCCGAGGTTGTC+GGG | - | chr3_1:66932245-66932264 | Msa0369590:intron | 55.0% | |
| CTCTGCACGCACCCAATGTT+TGG | - | chr3_1:66932494-66932513 | Msa0369590:CDS | 55.0% | |
| GGTGCTTGTCTGTCTCTGGT+TGG | + | chr3_1:66933167-66933186 | None:intergenic | 55.0% | |
| !! | GCCCTTGGTGTCAATAGGAG+TGG | + | chr3_1:66933262-66933281 | None:intergenic | 55.0% |
| CATCGCTATCCGAGGTTGTC+GGG | - | chr3_1:66932245-66932264 | Msa0369590:intron | 55.0% | |
| CTCTGCACGCACCCAATGTT+TGG | - | chr3_1:66932494-66932513 | Msa0369590:CDS | 55.0% | |
| GGTGCTTGTCTGTCTCTGGT+TGG | + | chr3_1:66933167-66933186 | None:intergenic | 55.0% | |
| !! | GCCCTTGGTGTCAATAGGAG+TGG | + | chr3_1:66933262-66933281 | None:intergenic | 55.0% |
| !! | TGGCATCGACCCGACAACCT+CGG | + | chr3_1:66932257-66932276 | None:intergenic | 60.0% |
| GGTCGCTTCAGACAAGCGAG+TGG | + | chr3_1:66932277-66932296 | None:intergenic | 60.0% | |
| !! | TGGCATCGACCCGACAACCT+CGG | + | chr3_1:66932257-66932276 | None:intergenic | 60.0% |
| GGTCGCTTCAGACAAGCGAG+TGG | + | chr3_1:66932277-66932296 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 66931670 | 66933913 | 66931670 | ID=Msa0369590;Name=Msa0369590 |
| chr3_1 | mRNA | 66931670 | 66933913 | 66931670 | ID=Msa0369590-mRNA-1;Parent=Msa0369590;Name=Msa0369590-mRNA-1;_AED=0.20;_eAED=0.20;_QI=264|1|1|1|1|1|7|188|268 |
| chr3_1 | exon | 66931670 | 66931950 | 66931670 | ID=Msa0369590-mRNA-1:exon:13687;Parent=Msa0369590-mRNA-1 |
| chr3_1 | exon | 66932069 | 66932143 | 66932069 | ID=Msa0369590-mRNA-1:exon:13686;Parent=Msa0369590-mRNA-1 |
| chr3_1 | exon | 66932281 | 66932350 | 66932281 | ID=Msa0369590-mRNA-1:exon:13685;Parent=Msa0369590-mRNA-1 |
| chr3_1 | exon | 66932446 | 66932528 | 66932446 | ID=Msa0369590-mRNA-1:exon:13684;Parent=Msa0369590-mRNA-1 |
| chr3_1 | exon | 66932958 | 66933113 | 66932958 | ID=Msa0369590-mRNA-1:exon:13683;Parent=Msa0369590-mRNA-1 |
| chr3_1 | exon | 66933229 | 66933397 | 66933229 | ID=Msa0369590-mRNA-1:exon:13682;Parent=Msa0369590-mRNA-1 |
| chr3_1 | exon | 66933489 | 66933913 | 66933489 | ID=Msa0369590-mRNA-1:exon:13681;Parent=Msa0369590-mRNA-1 |
| chr3_1 | five_prime_UTR | 66933650 | 66933913 | 66933650 | ID=Msa0369590-mRNA-1:five_prime_utr;Parent=Msa0369590-mRNA-1 |
| chr3_1 | CDS | 66933489 | 66933649 | 66933489 | ID=Msa0369590-mRNA-1:cds;Parent=Msa0369590-mRNA-1 |
| chr3_1 | CDS | 66933229 | 66933397 | 66933229 | ID=Msa0369590-mRNA-1:cds;Parent=Msa0369590-mRNA-1 |
| chr3_1 | CDS | 66932958 | 66933113 | 66932958 | ID=Msa0369590-mRNA-1:cds;Parent=Msa0369590-mRNA-1 |
| chr3_1 | CDS | 66932446 | 66932528 | 66932446 | ID=Msa0369590-mRNA-1:cds;Parent=Msa0369590-mRNA-1 |
| chr3_1 | CDS | 66932281 | 66932350 | 66932281 | ID=Msa0369590-mRNA-1:cds;Parent=Msa0369590-mRNA-1 |
| chr3_1 | CDS | 66932069 | 66932143 | 66932069 | ID=Msa0369590-mRNA-1:cds;Parent=Msa0369590-mRNA-1 |
| chr3_1 | CDS | 66931858 | 66931950 | 66931858 | ID=Msa0369590-mRNA-1:cds;Parent=Msa0369590-mRNA-1 |
| chr3_1 | three_prime_UTR | 66931670 | 66931857 | 66931670 | ID=Msa0369590-mRNA-1:three_prime_utr;Parent=Msa0369590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
