Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0498450 | XP_013459524.1 | 85.714 | 385 | 12 | 3 | 2 | 344 | 9 | 392 | 0.0 | 652 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0498450 | sp|Q9SHJ8|HIBC8_ARATH | 62.903 | 372 | 94 | 4 | 6 | 334 | 13 | 383 | 1.58e-166 | 472 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0498450 | A0A072V5U1 | 85.714 | 385 | 12 | 3 | 2 | 344 | 9 | 392 | 0.0 | 652 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0002680 | Msa0498450 | 0.809085 | 2.252360e-50 | -8.615850e-47 |
Msa0007970 | Msa0498450 | 0.805565 | 1.255238e-49 | -8.615850e-47 |
Msa0011500 | Msa0498450 | 0.819152 | 1.349688e-52 | -8.615850e-47 |
Msa0011930 | Msa0498450 | 0.803224 | 3.860608e-49 | -8.615850e-47 |
Msa0012940 | Msa0498450 | 0.803530 | 3.336773e-49 | -8.615850e-47 |
Msa0014570 | Msa0498450 | 0.837155 | 6.142248e-57 | -8.615850e-47 |
Msa0022750 | Msa0498450 | -0.811393 | 7.162014e-51 | -8.615850e-47 |
Msa0027820 | Msa0498450 | 0.832864 | 7.409989e-56 | -8.615850e-47 |
Msa0030280 | Msa0498450 | 0.803016 | 4.262811e-49 | -8.615850e-47 |
Msa0031820 | Msa0498450 | 0.820672 | 6.062007e-53 | -8.615850e-47 |
Msa0035120 | Msa0498450 | 0.803509 | 3.369711e-49 | -8.615850e-47 |
Msa0039250 | Msa0498450 | 0.842087 | 3.203443e-58 | -8.615850e-47 |
Msa0056450 | Msa0498450 | 0.808401 | 3.154098e-50 | -8.615850e-47 |
Msa0061340 | Msa0498450 | 0.830744 | 2.472145e-55 | -8.615850e-47 |
Msa0072720 | Msa0498450 | 0.802029 | 6.810711e-49 | -8.615850e-47 |
Msa0072900 | Msa0498450 | 0.817610 | 3.016683e-52 | -8.615850e-47 |
Msa0077880 | Msa0498450 | 0.802314 | 5.949765e-49 | -8.615850e-47 |
Msa0079110 | Msa0498450 | 0.836102 | 1.139144e-56 | -8.615850e-47 |
Msa0081520 | Msa0498450 | 0.820387 | 7.045500e-53 | -8.615850e-47 |
Msa0093850 | Msa0498450 | 0.804865 | 1.759297e-49 | -8.615850e-47 |
Msa0094850 | Msa0498450 | 0.805593 | 1.238356e-49 | -8.615850e-47 |
Msa0106620 | Msa0498450 | 0.814056 | 1.871042e-51 | -8.615850e-47 |
Msa0116790 | Msa0498450 | 0.802467 | 5.533964e-49 | -8.615850e-47 |
Msa0121090 | Msa0498450 | 0.801419 | 9.085013e-49 | -8.615850e-47 |
Msa0127100 | Msa0498450 | 0.802250 | 6.134130e-49 | -8.615850e-47 |
Msa0131330 | Msa0498450 | 0.832855 | 7.449568e-56 | -8.615850e-47 |
Msa0133720 | Msa0498450 | 0.837136 | 6.210291e-57 | -8.615850e-47 |
Msa0133820 | Msa0498450 | 0.830464 | 2.894660e-55 | -8.615850e-47 |
Msa0144360 | Msa0498450 | 0.829346 | 5.418844e-55 | -8.615850e-47 |
Msa0152400 | Msa0498450 | 0.840487 | 8.441285e-58 | -8.615850e-47 |
Msa0154440 | Msa0498450 | 0.840276 | 9.583338e-58 | -8.615850e-47 |
Msa0173890 | Msa0498450 | 0.829446 | 5.124278e-55 | -8.615850e-47 |
Msa0174450 | Msa0498450 | 0.804321 | 2.284771e-49 | -8.615850e-47 |
Msa0181230 | Msa0498450 | 0.839605 | 1.433904e-57 | -8.615850e-47 |
Msa0187030 | Msa0498450 | 0.845149 | 4.862631e-59 | -8.615850e-47 |
Msa0188150 | Msa0498450 | 0.809403 | 1.924766e-50 | -8.615850e-47 |
Msa0198800 | Msa0498450 | 0.805544 | 1.267967e-49 | -8.615850e-47 |
Msa0206840 | Msa0498450 | 0.806492 | 8.013546e-50 | -8.615850e-47 |
Msa0207350 | Msa0498450 | 0.844433 | 7.582606e-59 | -8.615850e-47 |
Msa0211150 | Msa0498450 | 0.800910 | 1.154432e-48 | -8.615850e-47 |
Msa0218810 | Msa0498450 | 0.805003 | 1.646069e-49 | -8.615850e-47 |
Msa0225220 | Msa0498450 | 0.817314 | 3.516618e-52 | -8.615850e-47 |
Msa0237210 | Msa0498450 | 0.801696 | 7.973197e-49 | -8.615850e-47 |
Msa0365100 | Msa0498450 | 0.801605 | 8.321800e-49 | -8.615850e-47 |
Msa0369590 | Msa0498450 | 0.802996 | 4.304102e-49 | -8.615850e-47 |
Msa0376630 | Msa0498450 | 0.807876 | 4.079790e-50 | -8.615850e-47 |
Msa0378720 | Msa0498450 | 0.831588 | 1.533076e-55 | -8.615850e-47 |
Msa0405130 | Msa0498450 | 0.847574 | 1.061290e-59 | -8.615850e-47 |
Msa0406770 | Msa0498450 | 0.803431 | 3.497328e-49 | -8.615850e-47 |
Msa0410500 | Msa0498450 | 0.820749 | 5.819966e-53 | -8.615850e-47 |
Msa0411410 | Msa0498450 | 0.827820 | 1.266554e-54 | -8.615850e-47 |
Msa0417880 | Msa0498450 | 0.800751 | 1.244056e-48 | -8.615850e-47 |
Msa0427100 | Msa0498450 | 0.809543 | 1.796388e-50 | -8.615850e-47 |
Msa0427120 | Msa0498450 | 0.815827 | 7.573835e-52 | -8.615850e-47 |
Msa0428050 | Msa0498450 | 0.806630 | 7.492841e-50 | -8.615850e-47 |
Msa0428240 | Msa0498450 | 0.803308 | 3.708116e-49 | -8.615850e-47 |
Msa0430750 | Msa0498450 | 0.803138 | 4.021366e-49 | -8.615850e-47 |
Msa0451070 | Msa0498450 | 0.880453 | 5.421650e-70 | -8.615850e-47 |
Msa0452710 | Msa0498450 | 0.807154 | 5.806829e-50 | -8.615850e-47 |
Msa0455740 | Msa0498450 | 0.808166 | 3.540248e-50 | -8.615850e-47 |
Msa0464680 | Msa0498450 | 0.802486 | 5.484462e-49 | -8.615850e-47 |
Msa0467100 | Msa0498450 | 0.828357 | 9.404589e-55 | -8.615850e-47 |
Msa0467430 | Msa0498450 | 0.810685 | 1.019500e-50 | -8.615850e-47 |
Msa0468250 | Msa0498450 | 0.805230 | 1.475811e-49 | -8.615850e-47 |
Msa0468410 | Msa0498450 | 0.820691 | 5.999415e-53 | -8.615850e-47 |
Msa0468800 | Msa0498450 | 0.818023 | 2.432919e-52 | -8.615850e-47 |
Msa0474730 | Msa0498450 | 0.826139 | 3.196188e-54 | -8.615850e-47 |
Msa0479170 | Msa0498450 | 0.828388 | 9.242928e-55 | -8.615850e-47 |
Msa0479200 | Msa0498450 | 0.843130 | 1.692516e-58 | -8.615850e-47 |
Msa0249540 | Msa0498450 | 0.806577 | 7.689315e-50 | -8.615850e-47 |
Msa0252540 | Msa0498450 | 0.803532 | 3.332916e-49 | -8.615850e-47 |
Msa0253290 | Msa0498450 | 0.817067 | 3.997252e-52 | -8.615850e-47 |
Msa0254940 | Msa0498450 | 0.800038 | 1.737928e-48 | -8.615850e-47 |
Msa0259220 | Msa0498450 | 0.800081 | 1.703844e-48 | -8.615850e-47 |
Msa0263080 | Msa0498450 | 0.829392 | 5.282986e-55 | -8.615850e-47 |
Msa0267920 | Msa0498450 | 0.810333 | 1.214603e-50 | -8.615850e-47 |
Msa0277450 | Msa0498450 | 0.800485 | 1.410050e-48 | -8.615850e-47 |
Msa0292400 | Msa0498450 | 0.806089 | 9.740833e-50 | -8.615850e-47 |
Msa0300270 | Msa0498450 | 0.830257 | 3.251014e-55 | -8.615850e-47 |
Msa0300320 | Msa0498450 | 0.839014 | 2.040571e-57 | -8.615850e-47 |
Msa0300690 | Msa0498450 | 0.809652 | 1.701911e-50 | -8.615850e-47 |
Msa0312530 | Msa0498450 | 0.801915 | 7.185998e-49 | -8.615850e-47 |
Msa0315690 | Msa0498450 | 0.801295 | 9.630312e-49 | -8.615850e-47 |
Msa0317730 | Msa0498450 | 0.808217 | 3.452764e-50 | -8.615850e-47 |
Msa0322900 | Msa0498450 | 0.800347 | 1.503761e-48 | -8.615850e-47 |
Msa0326590 | Msa0498450 | 0.811851 | 5.693853e-51 | -8.615850e-47 |
Msa0335800 | Msa0498450 | 0.804094 | 2.547271e-49 | -8.615850e-47 |
Msa0337700 | Msa0498450 | 0.817083 | 3.963130e-52 | -8.615850e-47 |
Msa0341690 | Msa0498450 | 0.812573 | 3.961521e-51 | -8.615850e-47 |
Msa0342010 | Msa0498450 | 0.842450 | 2.566825e-58 | -8.615850e-47 |
Msa0345330 | Msa0498450 | 0.815420 | 9.331038e-52 | -8.615850e-47 |
Msa0345410 | Msa0498450 | 0.810867 | 9.309667e-51 | -8.615850e-47 |
Msa0357990 | Msa0498450 | 0.803104 | 4.087174e-49 | -8.615850e-47 |
Msa0358400 | Msa0498450 | 0.810356 | 1.200505e-50 | -8.615850e-47 |
Msa0358890 | Msa0498450 | 0.855543 | 5.879771e-62 | -8.615850e-47 |
Msa0363810 | Msa0498450 | 0.810710 | 1.006961e-50 | -8.615850e-47 |
Msa0488790 | Msa0498450 | 0.816891 | 4.377689e-52 | -8.615850e-47 |
Msa0498450 | Msa0518030 | 0.803597 | 3.231856e-49 | -8.615850e-47 |
Msa0498450 | Msa0527190 | 0.800330 | 1.516271e-48 | -8.615850e-47 |
Msa0498450 | Msa0532960 | 0.811380 | 7.207664e-51 | -8.615850e-47 |
Msa0498450 | Msa0544660 | 0.819754 | 9.838026e-53 | -8.615850e-47 |
Msa0498450 | Msa0556010 | 0.825976 | 3.494454e-54 | -8.615850e-47 |
Msa0498450 | Msa0574390 | 0.832533 | 8.951648e-56 | -8.615850e-47 |
Msa0498450 | Msa0576680 | 0.830181 | 3.394426e-55 | -8.615850e-47 |
Msa0498450 | Msa0579660 | 0.837700 | 4.452009e-57 | -8.615850e-47 |
Msa0498450 | Msa0581690 | 0.819041 | 1.430350e-52 | -8.615850e-47 |
Msa0498450 | Msa0584550 | 0.839141 | 1.891697e-57 | -8.615850e-47 |
Msa0498450 | Msa0585920 | 0.801942 | 7.094664e-49 | -8.615850e-47 |
Msa0498450 | Msa0601950 | 0.825290 | 5.080780e-54 | -8.615850e-47 |
Msa0498450 | Msa0615420 | 0.802753 | 4.829871e-49 | -8.615850e-47 |
Msa0498450 | Msa0623330 | 0.808845 | 2.535425e-50 | -8.615850e-47 |
Msa0498450 | Msa0626450 | 0.819740 | 9.909214e-53 | -8.615850e-47 |
Msa0498450 | Msa0626490 | 0.822357 | 2.473902e-53 | -8.615850e-47 |
Msa0498450 | Msa0638480 | 0.820217 | 7.707500e-53 | -8.615850e-47 |
Msa0498450 | Msa0640500 | 0.825075 | 5.710653e-54 | -8.615850e-47 |
Msa0498450 | Msa0648520 | 0.802306 | 5.971167e-49 | -8.615850e-47 |
Msa0498450 | Msa0648900 | 0.801778 | 7.666663e-49 | -8.615850e-47 |
Msa0498450 | Msa0662340 | 0.801845 | 7.427636e-49 | -8.615850e-47 |
Msa0498450 | Msa0664600 | 0.825882 | 3.677608e-54 | -8.615850e-47 |
Msa0498450 | Msa0679100 | 0.818586 | 1.814451e-52 | -8.615850e-47 |
Msa0498450 | Msa0691050 | 0.805163 | 1.524183e-49 | -8.615850e-47 |
Msa0498450 | Msa0698290 | 0.806210 | 9.190332e-50 | -8.615850e-47 |
Msa0498450 | Msa0698640 | 0.804880 | 1.746522e-49 | -8.615850e-47 |
Msa0498450 | Msa0716410 | 0.802346 | 5.861400e-49 | -8.615850e-47 |
Msa0498450 | Msa0737570 | 0.807973 | 3.890828e-50 | -8.615850e-47 |
Msa0498450 | Msa0751260 | 0.820132 | 8.060034e-53 | -8.615850e-47 |
Msa0498450 | Msa0756530 | 0.807645 | 4.567739e-50 | -8.615850e-47 |
Msa0498450 | Msa0757800 | 0.814297 | 1.655204e-51 | -8.615850e-47 |
Msa0498450 | Msa0760130 | 0.802608 | 5.175696e-49 | -8.615850e-47 |
Msa0498450 | Msa0787850 | 0.819319 | 1.236553e-52 | -8.615850e-47 |
Msa0498450 | Msa0795070 | 0.837087 | 6.393725e-57 | -8.615850e-47 |
Msa0498450 | Msa0800700 | 0.818436 | 1.962056e-52 | -8.615850e-47 |
Msa0498450 | Msa0811130 | 0.826296 | 2.932708e-54 | -8.615850e-47 |
Msa0498450 | Msa0824660 | 0.804378 | 2.222980e-49 | -8.615850e-47 |
Msa0498450 | Msa0832120 | 0.804565 | 2.032316e-49 | -8.615850e-47 |
Msa0498450 | Msa0856920 | 0.803093 | 4.109356e-49 | -8.615850e-47 |
Msa0498450 | Msa0861510 | 0.835754 | 1.396155e-56 | -8.615850e-47 |
Msa0498450 | Msa0861530 | 0.826130 | 3.211527e-54 | -8.615850e-47 |
Msa0498450 | Msa0861600 | 0.839746 | 1.317526e-57 | -8.615850e-47 |
Msa0498450 | Msa0863930 | 0.819669 | 1.028889e-52 | -8.615850e-47 |
Msa0498450 | Msa0866520 | 0.822199 | 2.691161e-53 | -8.615850e-47 |
Msa0498450 | Msa0873860 | 0.805509 | 1.289936e-49 | -8.615850e-47 |
Msa0498450 | Msa0875290 | 0.804245 | 2.370033e-49 | -8.615850e-47 |
Msa0498450 | Msa0878510 | 0.803343 | 3.647899e-49 | -8.615850e-47 |
Msa0498450 | Msa0900620 | 0.811419 | 7.067714e-51 | -8.615850e-47 |
Msa0498450 | Msa0906690 | 0.809531 | 1.807493e-50 | -8.615850e-47 |
Msa0498450 | Msa0923030 | 0.807690 | 4.467953e-50 | -8.615850e-47 |
Msa0498450 | Msa0926470 | 0.804912 | 1.720199e-49 | -8.615850e-47 |
Msa0498450 | Msa0926890 | 0.805193 | 1.502566e-49 | -8.615850e-47 |
Msa0498450 | Msa0934890 | 0.800808 | 1.211123e-48 | -8.615850e-47 |
Msa0498450 | Msa0937020 | 0.804165 | 2.462147e-49 | -8.615850e-47 |
Msa0498450 | Msa0940580 | 0.822480 | 2.316626e-53 | -8.615850e-47 |
Msa0498450 | Msa0962070 | 0.831045 | 2.084723e-55 | -8.615850e-47 |
Msa0498450 | Msa0984690 | 0.801572 | 8.452932e-49 | -8.615850e-47 |
Msa0498450 | Msa1000920 | 0.813257 | 2.804625e-51 | -8.615850e-47 |
Msa0498450 | Msa1004800 | 0.814571 | 1.439723e-51 | -8.615850e-47 |
Msa0498450 | Msa1010070 | 0.809574 | 1.769460e-50 | -8.615850e-47 |
Msa0498450 | Msa1024740 | 0.811263 | 7.641210e-51 | -8.615850e-47 |
Msa0498450 | Msa1031930 | 0.820104 | 8.181490e-53 | -8.615850e-47 |
Msa0498450 | Msa1033660 | 0.820826 | 5.585573e-53 | -8.615850e-47 |
Msa0498450 | Msa1034500 | 0.834524 | 2.851616e-56 | -8.615850e-47 |
Msa0498450 | Msa1035960 | 0.802742 | 4.856895e-49 | -8.615850e-47 |
Msa0498450 | Msa1038080 | 0.816764 | 4.674907e-52 | -8.615850e-47 |
Msa0498450 | Msa1040840 | 0.803872 | 2.833519e-49 | -8.615850e-47 |
Msa0498450 | Msa1047080 | 0.808402 | 3.152143e-50 | -8.615850e-47 |
Msa0498450 | Msa1051600 | 0.815924 | 7.203855e-52 | -8.615850e-47 |
Msa0498450 | Msa1059960 | 0.808756 | 2.649306e-50 | -8.615850e-47 |
Msa0498450 | Msa1071770 | 0.811427 | 7.037789e-51 | -8.615850e-47 |
Msa0498450 | Msa1079230 | 0.828567 | 8.366662e-55 | -8.615850e-47 |
Msa0498450 | Msa1080960 | 0.807541 | 4.805999e-50 | -8.615850e-47 |
Msa0498450 | Msa1087980 | 0.824751 | 6.809906e-54 | -8.615850e-47 |
Msa0498450 | Msa1102770 | 0.806503 | 7.970436e-50 | -8.615850e-47 |
Msa0498450 | Msa1113800 | 0.800301 | 1.536711e-48 | -8.615850e-47 |
Msa0498450 | Msa1121260 | 0.801664 | 8.091757e-49 | -8.615850e-47 |
Msa0498450 | Msa1145810 | 0.825009 | 5.921010e-54 | -8.615850e-47 |
Msa0498450 | Msa1152510 | 0.825553 | 4.401955e-54 | -8.615850e-47 |
Msa0498450 | Msa1158830 | 0.817139 | 3.850114e-52 | -8.615850e-47 |
Msa0498450 | Msa1168950 | 0.809972 | 1.452953e-50 | -8.615850e-47 |
Msa0498450 | Msa1169040 | 0.813052 | 3.110592e-51 | -8.615850e-47 |
Msa0498450 | Msa1182770 | 0.807001 | 6.255068e-50 | -8.615850e-47 |
Msa0498450 | Msa1188710 | 0.800119 | 1.673662e-48 | -8.615850e-47 |
Msa0498450 | Msa1203710 | 0.806958 | 6.387741e-50 | -8.615850e-47 |
Msa0498450 | Msa1204100 | -0.807185 | 5.718154e-50 | -8.615850e-47 |
Msa0498450 | Msa1208160 | 0.800225 | 1.592169e-48 | -8.615850e-47 |
Msa0498450 | Msa1208430 | 0.810806 | 9.595685e-51 | -8.615850e-47 |
Msa0498450 | Msa1238820 | 0.803295 | 3.731806e-49 | -8.615850e-47 |
Msa0498450 | Msa1239920 | 0.804582 | 2.015713e-49 | -8.615850e-47 |
Msa0498450 | Msa1243870 | 0.815383 | 9.510749e-52 | -8.615850e-47 |
Msa0498450 | Msa1269890 | 0.815511 | 8.903403e-52 | -8.615850e-47 |
Msa0498450 | Msa1276660 | 0.826141 | 3.192064e-54 | -8.615850e-47 |
Msa0498450 | Msa1298370 | 0.810659 | 1.032530e-50 | -8.615850e-47 |
Msa0498450 | Msa1317960 | 0.802057 | 6.718923e-49 | -8.615850e-47 |
Msa0498450 | Msa1338830 | 0.825418 | 4.739140e-54 | -8.615850e-47 |
Msa0498450 | Msa1340510 | 0.800020 | 1.752602e-48 | -8.615850e-47 |
Msa0498450 | Msa1348090 | 0.818435 | 1.963349e-52 | -8.615850e-47 |
Msa0498450 | Msa1353470 | 0.803239 | 3.832249e-49 | -8.615850e-47 |
Msa0498450 | Msa1356830 | 0.821514 | 3.877126e-53 | -8.615850e-47 |
Msa0498450 | Msa1368430 | 0.822922 | 1.827543e-53 | -8.615850e-47 |
Msa0498450 | Msa1369150 | 0.809162 | 2.168415e-50 | -8.615850e-47 |
Msa0498450 | Msa1373820 | 0.800298 | 1.538866e-48 | -8.615850e-47 |
Msa0498450 | Msa1382400 | 0.803588 | 3.245016e-49 | -8.615850e-47 |
Msa0498450 | Msa1383230 | 0.826808 | 2.213913e-54 | -8.615850e-47 |
Msa0498450 | Msa1383530 | 0.804771 | 1.840686e-49 | -8.615850e-47 |
Msa0498450 | Msa1386710 | 0.805449 | 1.328123e-49 | -8.615850e-47 |
Msa0498450 | Msa1398090 | 0.801474 | 8.851495e-49 | -8.615850e-47 |
Msa0498450 | Msa1418240 | 0.806704 | 7.227266e-50 | -8.615850e-47 |
Msa0498450 | Msa1418260 | 0.807063 | 6.069135e-50 | -8.615850e-47 |
Msa0498450 | Msa1423350 | 0.800180 | 1.626661e-48 | -8.615850e-47 |
Msa0498450 | Msa1425880 | 0.810128 | 1.344728e-50 | -8.615850e-47 |
Msa0498450 | Msa1432500 | 0.814538 | 1.464002e-51 | -8.615850e-47 |
Msa0498450 | Msa1437940 | 0.809412 | 1.916587e-50 | -8.615850e-47 |
Msa0498450 | Msa1440310 | 0.805303 | 1.424613e-49 | -8.615850e-47 |
Msa0498450 | Msa1440740 | 0.816069 | 6.685877e-52 | -8.615850e-47 |
Msa0498450 | Msa1440960 | 0.806024 | 1.005513e-49 | -8.615850e-47 |
Msa0498450 | Msa1444510 | 0.815835 | 7.542818e-52 | -8.615850e-47 |
Msa0498450 | Msa1446780 | 0.800421 | 1.453011e-48 | -8.615850e-47 |
Msa0498450 | Msa1452120 | 0.808546 | 2.937549e-50 | -8.615850e-47 |
Msa0498450 | Msa1460020 | 0.800578 | 1.349318e-48 | -8.615850e-47 |
Msa0498450 | Msa1464810 | 0.801343 | 9.414985e-49 | -8.615850e-47 |
Msa0498450 | Msa1466470 | 0.803690 | 3.090510e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0498450 | MtrunA17_Chr3g0095921 | 85.714 | 385 | 12 | 3 | 2 | 344 | 9 | 392 | 0.0 | 652 |
Msa0498450 | MtrunA17_Chr8g0334701 | 36.212 | 359 | 181 | 5 | 3 | 314 | 35 | 392 | 2.16e-71 | 227 |
Msa0498450 | MtrunA17_Chr8g0337981 | 37.845 | 362 | 178 | 5 | 3 | 318 | 9 | 369 | 7.73e-69 | 220 |
Msa0498450 | MtrunA17_Chr1g0150221 | 34.530 | 362 | 186 | 5 | 2 | 316 | 41 | 398 | 1.21e-66 | 215 |
Msa0498450 | MtrunA17_Chr8g0390721 | 29.006 | 362 | 194 | 10 | 12 | 312 | 54 | 413 | 1.60e-38 | 141 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0498450 | AT1G06550.1 | 62.903 | 372 | 94 | 4 | 6 | 334 | 13 | 383 | 1.60e-167 | 472 |
Msa0498450 | AT5G65940.1 | 37.500 | 360 | 180 | 4 | 2 | 317 | 7 | 365 | 4.49e-80 | 249 |
Msa0498450 | AT5G65940.4 | 37.500 | 360 | 180 | 4 | 2 | 317 | 7 | 365 | 4.49e-80 | 249 |
Msa0498450 | AT2G30660.1 | 37.921 | 356 | 160 | 5 | 2 | 305 | 3 | 349 | 1.31e-74 | 235 |
Msa0498450 | AT5G65940.2 | 42.199 | 282 | 152 | 3 | 2 | 273 | 7 | 287 | 6.95e-73 | 229 |
Msa0498450 | AT2G30650.1 | 37.921 | 356 | 172 | 5 | 2 | 311 | 3 | 355 | 9.33e-73 | 230 |
Msa0498450 | AT5G65940.3 | 38.485 | 330 | 158 | 4 | 2 | 287 | 7 | 335 | 1.08e-72 | 229 |
Msa0498450 | AT2G30650.2 | 41.549 | 284 | 151 | 4 | 2 | 273 | 3 | 283 | 6.83e-67 | 214 |
Msa0498450 | AT4G31810.1 | 34.426 | 366 | 185 | 6 | 3 | 317 | 40 | 401 | 2.97e-65 | 212 |
Msa0498450 | AT3G60510.1 | 36.490 | 359 | 180 | 5 | 5 | 316 | 38 | 395 | 4.39e-65 | 211 |
Msa0498450 | AT2G30660.2 | 36.503 | 326 | 146 | 5 | 32 | 305 | 1 | 317 | 3.68e-62 | 202 |
Msa0498450 | AT3G60510.3 | 34.115 | 384 | 180 | 6 | 5 | 316 | 38 | 420 | 1.16e-59 | 198 |
Msa0498450 | AT3G60510.2 | 38.710 | 279 | 160 | 3 | 5 | 273 | 38 | 315 | 2.58e-55 | 183 |
Msa0498450 | AT4G13360.1 | 32.153 | 367 | 178 | 14 | 12 | 313 | 57 | 417 | 3.48e-44 | 157 |
Msa0498450 | AT3G24360.2 | 29.086 | 361 | 193 | 10 | 12 | 313 | 54 | 410 | 2.60e-40 | 147 |
Msa0498450 | AT3G24360.1 | 28.219 | 365 | 195 | 11 | 12 | 313 | 54 | 414 | 7.44e-37 | 137 |
Msa0498450 | AT3G24360.6 | 28.179 | 291 | 147 | 9 | 82 | 313 | 2 | 289 | 1.48e-26 | 107 |
Msa0498450 | AT3G24360.3 | 28.169 | 284 | 142 | 9 | 89 | 313 | 30 | 310 | 7.05e-26 | 105 |
Msa0498450 | AT3G24360.5 | 28.169 | 284 | 142 | 9 | 89 | 313 | 32 | 312 | 7.08e-26 | 105 |
Msa0498450 | AT3G24360.4 | 29.119 | 261 | 162 | 9 | 12 | 252 | 54 | 311 | 2.83e-23 | 99.4 |
Find 73 sgRNAs with CRISPR-Local
Find 550 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACCTGCATTCCACACTTTC+TGG | 0.177793 | 3_4:-34861380 | None:intergenic |
CTCAAGAGCAGCAGCATTAA+AGG | 0.187318 | 3_4:+34861750 | Msa0498450:three_prime_UTR |
TCAGGAACTTCATATATAAA+TGG | 0.257009 | 3_4:-34861610 | None:intergenic |
ATATCTGCTAGCAGAATATT+TGG | 0.264767 | 3_4:+34854348 | Msa0498450:CDS |
AATATAAATTAAAATTATTC+AGG | 0.271678 | 3_4:-34861628 | None:intergenic |
TGGTTAGGTCCAGCTTTAAA+AGG | 0.296240 | 3_4:+34860098 | Msa0498450:CDS |
GATATTTGTGTTTCTCTGTT+TGG | 0.296575 | 3_4:-34861527 | None:intergenic |
GCTGGTAGGGCTTTCTGTGC+TGG | 0.297545 | 3_4:+34854567 | Msa0498450:CDS |
GCTACTCCTGAAGCAAGTTT+TGG | 0.303462 | 3_4:+34855600 | Msa0498450:CDS |
AGCAGCATTAAAGGCCTCTT+TGG | 0.324676 | 3_4:+34861759 | Msa0498450:three_prime_UTR |
CTTGAGTGATGTTCCCCATT+TGG | 0.351838 | 3_4:-34861733 | None:intergenic |
TATTATTAAAAGAGGTTAGC+TGG | 0.356765 | 3_4:+34861647 | Msa0498450:three_prime_UTR |
CGCTTGATTAGATTAAATTC+TGG | 0.367422 | 3_4:+34859711 | Msa0498450:CDS |
TACTATCATTCTCGTTTGCC+AGG | 0.369194 | 3_4:+34855648 | Msa0498450:CDS |
GTTACAACTGAGAATTTCAA+TGG | 0.396852 | 3_4:-34855447 | None:intergenic |
GAGATAGCATTCAACTGCTT+TGG | 0.402603 | 3_4:-34854193 | None:intergenic |
TGAAATCCAAAACTTGCTTC+AGG | 0.406236 | 3_4:-34855606 | None:intergenic |
AGCAGATCTAATTATCTTGA+AGG | 0.411003 | 3_4:+34854393 | Msa0498450:CDS |
GAGAAGAGATAGACCATGTA+AGG | 0.415250 | 3_4:+34854152 | Msa0498450:CDS |
TTAATTTATATTATTAAAAG+AGG | 0.416893 | 3_4:+34861639 | Msa0498450:three_prime_UTR |
GGAATTAGTTGCGGCTGGAC+TGG | 0.425198 | 3_4:+34856039 | Msa0498450:CDS |
GTTTCCTCTAGTTTCCAAAT+GGG | 0.430157 | 3_4:+34861719 | Msa0498450:intron |
GGGGATTTGAGAGTATTCTA+TGG | 0.430649 | 3_4:+34854591 | Msa0498450:CDS |
TGTTTCCTCTAGTTTCCAAA+TGG | 0.433804 | 3_4:+34861718 | Msa0498450:intron |
ATTATTAAAAGAGGTTAGCT+GGG | 0.435279 | 3_4:+34861648 | Msa0498450:three_prime_UTR |
AGCTCTAATTCTTTGTCAAA+AGG | 0.436167 | 3_4:-34861350 | None:intergenic |
AAAGAAGGAAATGGATGGTT+AGG | 0.436849 | 3_4:+34860083 | Msa0498450:CDS |
GTAGGGCTTTCTGTGCTGGA+GGG | 0.445553 | 3_4:+34854571 | Msa0498450:CDS |
GAATCAAGCAAAGAAGGAAA+TGG | 0.445684 | 3_4:+34860074 | Msa0498450:CDS |
CTTACTGGAGCGCGGTTGAA+TGG | 0.451435 | 3_4:+34856013 | Msa0498450:intron |
TCTTGTCCATGGAATTTCAA+TGG | 0.455048 | 3_4:+34855401 | Msa0498450:CDS |
AAAATCTGTACACCACTTCA+AGG | 0.458689 | 3_4:-34855212 | None:intergenic |
TTCCAGAAAGTGTGGAATGC+AGG | 0.460339 | 3_4:+34861378 | Msa0498450:CDS |
TGGAGCATTGTCCTTGTCAA+TGG | 0.461725 | 3_4:-34861070 | None:intergenic |
CAAAGTAGATGATGAGAAGT+TGG | 0.466200 | 3_4:+34861313 | Msa0498450:CDS |
AGGGTGGACTTTACCAGGTC+AGG | 0.467947 | 3_4:-34854217 | None:intergenic |
CTTGTCCATGGAATTTCAAT+GGG | 0.476159 | 3_4:+34855402 | Msa0498450:CDS |
CATCAGGTTGCTCTTGTCCA+TGG | 0.477425 | 3_4:+34855390 | Msa0498450:intron |
TTTGGATTTCATACTGATTG+TGG | 0.478255 | 3_4:+34855618 | Msa0498450:CDS |
TCAAAGTGATTACCCTTACA+TGG | 0.503994 | 3_4:-34854165 | None:intergenic |
GGAAAGGAATTAGTTGCGGC+TGG | 0.504298 | 3_4:+34856034 | Msa0498450:CDS |
TAAGCTCAAAACACAAGGTA+TGG | 0.509900 | 3_4:-34861912 | None:intergenic |
GAAGCTGAATCAAGCAAAGA+AGG | 0.513547 | 3_4:+34860068 | Msa0498450:CDS |
CTCCACCCATTGAAATTCCA+TGG | 0.515087 | 3_4:-34855407 | None:intergenic |
TATATGTGAGACTATTTGAA+AGG | 0.518317 | 3_4:+34861807 | Msa0498450:three_prime_UTR |
TCTTATAGGTACTAATGTGA+TGG | 0.519860 | 3_4:-34855245 | None:intergenic |
TCAATTTCAAACAGGTGGGA+TGG | 0.527651 | 3_4:+34861476 | Msa0498450:intron |
TAGGGCTTTCTGTGCTGGAG+GGG | 0.527824 | 3_4:+34854572 | Msa0498450:CDS |
GGTAGGGCTTTCTGTGCTGG+AGG | 0.528264 | 3_4:+34854570 | Msa0498450:CDS |
TCATCTACTTTGTCAAGTGA+TGG | 0.540491 | 3_4:-34861302 | None:intergenic |
ATATGTGAGACTATTTGAAA+GGG | 0.551579 | 3_4:+34861808 | Msa0498450:three_prime_UTR |
TTACAACTGAGAATTTCAAT+GGG | 0.551626 | 3_4:-34855446 | None:intergenic |
GTCCATGGAATTTCAATGGG+TGG | 0.557121 | 3_4:+34855405 | Msa0498450:CDS |
GAATGCTATCTCACCTGACC+TGG | 0.565041 | 3_4:+34854204 | Msa0498450:CDS |
AATTGATGAGTGTTTCTCAA+AGG | 0.565328 | 3_4:+34859923 | Msa0498450:CDS |
TTTCCTCTAGTTTCCAAATG+GGG | 0.571144 | 3_4:+34861720 | Msa0498450:intron |
ACTATCATTCTCGTTTGCCA+GGG | 0.586309 | 3_4:+34855649 | Msa0498450:CDS |
ACTCATAAACTAATCCAAAG+AGG | 0.592686 | 3_4:-34861773 | None:intergenic |
GCTTCAGATTCCAGAAAGTG+TGG | 0.599115 | 3_4:+34861370 | Msa0498450:CDS |
ATTGAAAATAGCATTAAGAT+CGG | 0.603251 | 3_4:+34860145 | Msa0498450:CDS |
GCTCAAAACACAAGGTATGG+AGG | 0.609426 | 3_4:-34861909 | None:intergenic |
TGACAAGGACAATGCTCCAA+AGG | 0.609649 | 3_4:+34861074 | Msa0498450:CDS |
GAATGGAAAGGAATTAGTTG+CGG | 0.611054 | 3_4:+34856030 | Msa0498450:CDS |
TGGAGCGCGGTTGAATGGAA+AGG | 0.616442 | 3_4:+34856018 | Msa0498450:intron |
TCTACTTTGTCAAGTGATGG+AGG | 0.616670 | 3_4:-34861299 | None:intergenic |
CAAGCAAAGAAGGAAATGGA+TGG | 0.625108 | 3_4:+34860078 | Msa0498450:CDS |
CATGGAATTTCAATGGGTGG+AGG | 0.625143 | 3_4:+34855408 | Msa0498450:CDS |
GACCCTAAGCTCAAAACACA+AGG | 0.625639 | 3_4:-34861917 | None:intergenic |
GATTTGAGAGTATTCTATGG+TGG | 0.656652 | 3_4:+34854594 | Msa0498450:CDS |
AGGGGATTCATGCCTTGAAG+TGG | 0.660397 | 3_4:+34855200 | Msa0498450:intron |
TAGTACCTATAAGAAAACTC+AGG | 0.673028 | 3_4:+34855254 | Msa0498450:CDS |
AGAAGAGATAGACCATGTAA+GGG | 0.680019 | 3_4:+34854153 | Msa0498450:CDS |
TAGAGCTCTCACCATTGACA+AGG | 0.688831 | 3_4:+34861059 | Msa0498450:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GTTTGTATTTATTTTTTAAA+TGG | + | chr3_4:34853454-34853473 | Msa0498450:intron | 10.0% |
!! | AATGAAATATTTCATAAATT+AGG | + | chr3_4:34855733-34855752 | Msa0498450:intron | 10.0% |
!! | ATAAAATAAAATTTAACAGT+TGG | - | chr3_4:34858884-34858903 | None:intergenic | 10.0% |
!!! | CTGTTAAATTTTATTTTATT+TGG | + | chr3_4:34858885-34858904 | Msa0498450:intron | 10.0% |
!! | AAAAAGTAAAATTTATTTGT+AGG | + | chr3_4:34859543-34859562 | Msa0498450:intron | 10.0% |
!! | AACAAAAAAAAAAATTAAAG+AGG | + | chr3_4:34859601-34859620 | Msa0498450:intron | 10.0% |
!! | TATGCTTGATAAATTAATAA+TGG | + | chr3_4:34854095-34854114 | Msa0498450:intron | 15.0% |
!! | TACAAAATCAAAATTCAAAA+TGG | - | chr3_4:34854121-34854140 | None:intergenic | 15.0% |
!!! | ATTTTGAATTTTGATTTTGT+AGG | + | chr3_4:34854120-34854139 | Msa0498450:intron | 15.0% |
!! | GGATTAAAAAAAATAATTCA+AGG | - | chr3_4:34854249-34854268 | None:intergenic | 15.0% |
!!! | TTGTACAATTGTTATTTTTA+GGG | + | chr3_4:34854543-34854562 | Msa0498450:intron | 15.0% |
!! | AATATATTACTATTCAAAAG+AGG | - | chr3_4:34855170-34855189 | None:intergenic | 15.0% |
!! | AAATATTTAATTGATACACA+TGG | - | chr3_4:34855881-34855900 | None:intergenic | 15.0% |
!! | AAAAATACAATATATCTTTG+AGG | + | chr3_4:34856289-34856308 | Msa0498450:intron | 15.0% |
!! | AATTAAATCTAACCTAATTT+AGG | + | chr3_4:34858968-34858987 | Msa0498450:intron | 15.0% |
!!! | TATAATTAAGATTTTTGACT+CGG | + | chr3_4:34859103-34859122 | Msa0498450:intron | 15.0% |
!! | TAGAAACAAAAATTATAGAA+TGG | - | chr3_4:34859205-34859224 | None:intergenic | 15.0% |
!!! | TTTTATATGGATTAATTGTT+TGG | + | chr3_4:34859570-34859589 | Msa0498450:intron | 15.0% |
!! | TGAAGAAATTATAAAAACAT+TGG | + | chr3_4:34859953-34859972 | Msa0498450:CDS | 15.0% |
!! | TAAATAAAATAGACTAAATC+AGG | + | chr3_4:34860585-34860604 | Msa0498450:intron | 15.0% |
!!! | TTCATTGTCATTTTATTTTA+AGG | + | chr3_4:34861032-34861051 | Msa0498450:intron | 15.0% |
!!! | TCATTGTCATTTTATTTTAA+GGG | + | chr3_4:34861033-34861052 | Msa0498450:intron | 15.0% |
!!! | ATAATAACATAATAAGTTGA+AGG | - | chr3_4:34861442-34861461 | None:intergenic | 15.0% |
!!! | TTTGAAATTGAAATGAATTT+TGG | - | chr3_4:34861467-34861486 | None:intergenic | 15.0% |
!! | GATGCTAATTTATAGTTTAT+TGG | + | chr3_4:34853728-34853747 | Msa0498450:intron | 20.0% |
!! | AATAATAATATGTGTCTGTT+TGG | - | chr3_4:34854066-34854085 | None:intergenic | 20.0% |
!!! | CAATTTTCAACAATTTCAAA+GGG | - | chr3_4:34854437-34854456 | None:intergenic | 20.0% |
!!! | TCAATTTTCAACAATTTCAA+AGG | - | chr3_4:34854438-34854457 | None:intergenic | 20.0% |
!!! | GTTGTACAATTGTTATTTTT+AGG | + | chr3_4:34854542-34854561 | Msa0498450:intron | 20.0% |
!!! | TATTTCCAACATTTTCTTAT+AGG | - | chr3_4:34854711-34854730 | None:intergenic | 20.0% |
!!! | CTTTTTTCTTATAATACTAC+TGG | - | chr3_4:34854813-34854832 | None:intergenic | 20.0% |
!!! | TATACTTTATTTCTCTCATT+AGG | - | chr3_4:34855125-34855144 | None:intergenic | 20.0% |
!! | TAATGAGAGAAATAAAGTAT+AGG | + | chr3_4:34855124-34855143 | Msa0498450:intron | 20.0% |
!! | TAATATATTTCTTCTTGACA+GGG | + | chr3_4:34855181-34855200 | Msa0498450:intron | 20.0% |
!!! | CAAAGCATTTTTTGAAATTT+AGG | - | chr3_4:34855570-34855589 | None:intergenic | 20.0% |
!!! | ATCTATTGTTTTAGAATTGA+GGG | - | chr3_4:34855799-34855818 | None:intergenic | 20.0% |
!!! | AATCTATTGTTTTAGAATTG+AGG | - | chr3_4:34855800-34855819 | None:intergenic | 20.0% |
!! | AAGGTTTAATACTTCAATTA+TGG | + | chr3_4:34856543-34856562 | Msa0498450:intron | 20.0% |
!! | TTTAATACTTCAATTATGGA+TGG | + | chr3_4:34856547-34856566 | Msa0498450:intron | 20.0% |
!! | AATTTCACTACTATATTCTA+AGG | - | chr3_4:34856709-34856728 | None:intergenic | 20.0% |
!! | ATACATTAGATACAATGATA+TGG | + | chr3_4:34857024-34857043 | Msa0498450:intron | 20.0% |
!! | TATACTCCAATATATCTTAA+GGG | + | chr3_4:34857102-34857121 | Msa0498450:intron | 20.0% |
!! | TCTAAATTTATTATCCATGT+CGG | + | chr3_4:34857478-34857497 | Msa0498450:intron | 20.0% |
!!! | TAGGATTTTTAAGTTTCTTT+CGG | - | chr3_4:34858067-34858086 | None:intergenic | 20.0% |
!!! | GATTATCAGAATTTTAAGAT+GGG | - | chr3_4:34858136-34858155 | None:intergenic | 20.0% |
!!! | TGATTATCAGAATTTTAAGA+TGG | - | chr3_4:34858137-34858156 | None:intergenic | 20.0% |
!! | AATATTAAATACAAAGCAAG+GGG | - | chr3_4:34858224-34858243 | None:intergenic | 20.0% |
!! | GAATATTAAATACAAAGCAA+GGG | - | chr3_4:34858225-34858244 | None:intergenic | 20.0% |
!! | AGAATATTAAATACAAAGCA+AGG | - | chr3_4:34858226-34858245 | None:intergenic | 20.0% |
!! | TTATTATCATTACATGGTTA+TGG | - | chr3_4:34858375-34858394 | None:intergenic | 20.0% |
!! | AAGACTTTATTATCATTACA+TGG | - | chr3_4:34858381-34858400 | None:intergenic | 20.0% |
!! | TGCTAATTATAGAAACAAAA+AGG | + | chr3_4:34859039-34859058 | Msa0498450:intron | 20.0% |
!! | CACATCACATAAAAAAAAAA+GGG | - | chr3_4:34859406-34859425 | None:intergenic | 20.0% |
!! | AAAGTGAGTTATTTAGATTA+TGG | + | chr3_4:34859462-34859481 | Msa0498450:intron | 20.0% |
!!! | ATTTGTAGGACATTTTTATA+TGG | + | chr3_4:34859557-34859576 | Msa0498450:intron | 20.0% |
!! | ATTGAAAATAGCATTAAGAT+CGG | + | chr3_4:34860145-34860164 | Msa0498450:CDS | 20.0% |
!!! | ATGCATAACTTGTTTAATAT+TGG | + | chr3_4:34860627-34860646 | Msa0498450:intron | 20.0% |
!!! | CTATAATAAATTTTGACAGA+AGG | + | chr3_4:34860950-34860969 | Msa0498450:intron | 20.0% |
!! | AATTCATTTCAATTTCAAAC+AGG | + | chr3_4:34861468-34861487 | Msa0498450:intron | 20.0% |
!! | AAGTAGAGATGAAAAATATT+TGG | - | chr3_4:34861582-34861601 | None:intergenic | 20.0% |
!!! | GATTATAAAAACTGTCATTT+TGG | + | chr3_4:34861878-34861897 | Msa0498450:three_prime_UTR | 20.0% |
!!! | ATTTTTAAGTCACCAGAAAA+TGG | - | chr3_4:34853578-34853597 | None:intergenic | 25.0% |
!! | TATAGCAGTTTTACATCAAA+TGG | + | chr3_4:34853759-34853778 | Msa0498450:intron | 25.0% |
! | TTGCAATTACAAAGACAATA+AGG | - | chr3_4:34853849-34853868 | None:intergenic | 25.0% |
! | AAATAATTCAAGGTTGAGTA+GGG | - | chr3_4:34854239-34854258 | None:intergenic | 25.0% |
! | AAAATAATTCAAGGTTGAGT+AGG | - | chr3_4:34854240-34854259 | None:intergenic | 25.0% |
! | TTTAATCTTTGAATCCAATC+AGG | + | chr3_4:34854324-34854343 | Msa0498450:intron | 25.0% |
! | TAGCAGAATATTTGGAAAAA+TGG | + | chr3_4:34854356-34854375 | Msa0498450:CDS | 25.0% |
! | AGCAGAATATTTGGAAAAAT+GGG | + | chr3_4:34854357-34854376 | Msa0498450:CDS | 25.0% |
!! | TCATTCTCTATAGGATTTTT+AGG | + | chr3_4:34854637-34854656 | Msa0498450:intron | 25.0% |
!! | ATTAGCCTATAAGAAAATGT+TGG | + | chr3_4:34854703-34854722 | Msa0498450:intron | 25.0% |
! | ATTTCTCTCATTAGGTTTAT+TGG | - | chr3_4:34855117-34855136 | None:intergenic | 25.0% |
! | GTAATATATTTCTTCTTGAC+AGG | + | chr3_4:34855180-34855199 | Msa0498450:intron | 25.0% |
! | AATATATTTCTTCTTGACAG+GGG | + | chr3_4:34855182-34855201 | Msa0498450:intron | 25.0% |
!! | AAAGTCTCATGTTTTCTAAA+TGG | + | chr3_4:34855352-34855371 | Msa0498450:intron | 25.0% |
!! | AAGTCTCATGTTTTCTAAAT+GGG | + | chr3_4:34855353-34855372 | Msa0498450:intron | 25.0% |
! | TTACAACTGAGAATTTCAAT+GGG | - | chr3_4:34855449-34855468 | None:intergenic | 25.0% |
!!! | TTATTCGTCTAAAACCTTTT+TGG | + | chr3_4:34855505-34855524 | Msa0498450:intron | 25.0% |
! | ATTTCAAAAAATGCTTTGAC+AGG | + | chr3_4:34855572-34855591 | Msa0498450:intron | 25.0% |
! | ATCTTACTCATCAATAGTTA+TGG | + | chr3_4:34855919-34855938 | Msa0498450:intron | 25.0% |
! | TCAATAGTTATGGAACTTTA+AGG | + | chr3_4:34855929-34855948 | Msa0498450:intron | 25.0% |
!! | CAATATATCTTTGAGGAATT+CGG | + | chr3_4:34856296-34856315 | Msa0498450:intron | 25.0% |
! | TTGTAGCATGAGAAAAAATA+GGG | - | chr3_4:34856666-34856685 | None:intergenic | 25.0% |
! | TTTGTAGCATGAGAAAAAAT+AGG | - | chr3_4:34856667-34856686 | None:intergenic | 25.0% |
! | AAAATCCTAAAAAACACAGT+GGG | + | chr3_4:34856853-34856872 | Msa0498450:intron | 25.0% |
!! | TCAGTGCACATTTTAAATTA+TGG | + | chr3_4:34856886-34856905 | Msa0498450:intron | 25.0% |
!! | CAGTGCACATTTTAAATTAT+GGG | + | chr3_4:34856887-34856906 | Msa0498450:intron | 25.0% |
!!! | ACATCTTTTAAGAGAATAGA+TGG | + | chr3_4:34856960-34856979 | Msa0498450:intron | 25.0% |
! | ATATATTGGAGTATACACTT+GGG | - | chr3_4:34857097-34857116 | None:intergenic | 25.0% |
! | GTATACTCCAATATATCTTA+AGG | + | chr3_4:34857101-34857120 | Msa0498450:intron | 25.0% |
! | TCAAATAAGTCAATTCAAAC+AGG | - | chr3_4:34857128-34857147 | None:intergenic | 25.0% |
! | AATTAACTGTTTATCCAAAG+AGG | + | chr3_4:34857326-34857345 | Msa0498450:intron | 25.0% |
! | ATTAACTGTTTATCCAAAGA+GGG | + | chr3_4:34857327-34857346 | Msa0498450:intron | 25.0% |
! | TTCAATGTAATTACATGTGT+CGG | - | chr3_4:34857447-34857466 | None:intergenic | 25.0% |
! | TAAGAATTCTATCCTAATTC+CGG | - | chr3_4:34857559-34857578 | None:intergenic | 25.0% |
! | AATTAGGATAGAATTCTTAC+CGG | + | chr3_4:34857560-34857579 | Msa0498450:intron | 25.0% |
! | TAGAAAACTAGAATTCTTAC+CGG | + | chr3_4:34857591-34857610 | Msa0498450:intron | 25.0% |
!!! | GATTCTTGTTTTAAACTTCA+TGG | - | chr3_4:34857826-34857845 | None:intergenic | 25.0% |
! | TTAAAAACCTTCAAAAGAGA+AGG | + | chr3_4:34857985-34858004 | Msa0498450:intron | 25.0% |
!!! | AGGATTTTTAAGTTTCTTTC+GGG | - | chr3_4:34858066-34858085 | None:intergenic | 25.0% |
!!! | TATTTTAACCTCTTATGAGT+TGG | - | chr3_4:34858254-34858273 | None:intergenic | 25.0% |
! | ATATCCCAAATTTCGAAATA+AGG | + | chr3_4:34858403-34858422 | Msa0498450:intron | 25.0% |
!! | TGATCCTTATTTCGAAATTT+GGG | - | chr3_4:34858410-34858429 | None:intergenic | 25.0% |
!! | ATGATCCTTATTTCGAAATT+TGG | - | chr3_4:34858411-34858430 | None:intergenic | 25.0% |
!!! | TTTGTTTCTATTATGTGATG+TGG | + | chr3_4:34859215-34859234 | Msa0498450:intron | 25.0% |
! | CCACATCACATAAAAAAAAA+AGG | - | chr3_4:34859407-34859426 | None:intergenic | 25.0% |
!!! | CCTTTTTTTTTTATGTGATG+TGG | + | chr3_4:34859404-34859423 | Msa0498450:intron | 25.0% |
! | TGGTAAGTTTCTTACTATTT+CGG | + | chr3_4:34859973-34859992 | Msa0498450:intron | 25.0% |
! | CTTAAGATTTCATATATCGT+TGG | - | chr3_4:34860232-34860251 | None:intergenic | 25.0% |
! | GATTATCATTTCAAAACTTC+AGG | - | chr3_4:34860278-34860297 | None:intergenic | 25.0% |
!!! | AAAGAAAGTAGTTTTAGAAG+AGG | - | chr3_4:34860300-34860319 | None:intergenic | 25.0% |
! | TAGTAGATAATCACTGTAAT+TGG | - | chr3_4:34860558-34860577 | None:intergenic | 25.0% |
!!! | TTCATTTTTCTGTATACTCT+TGG | + | chr3_4:34860683-34860702 | Msa0498450:intron | 25.0% |
!!! | CAGTATTTTTACTTATCAGT+AGG | - | chr3_4:34860791-34860810 | None:intergenic | 25.0% |
! | GATAAGTAAAAATACTGTCT+TGG | + | chr3_4:34860794-34860813 | Msa0498450:intron | 25.0% |
! | TAAATAATCTACTTGTTCAG+TGG | + | chr3_4:34861273-34861292 | Msa0498450:intron | 25.0% |
! | AAATAATCTACTTGTTCAGT+GGG | + | chr3_4:34861274-34861293 | Msa0498450:intron | 25.0% |
! | TAGAGATGAAAAATATTTGG+AGG | - | chr3_4:34861579-34861598 | None:intergenic | 25.0% |
!! | TATTTTTCATCTCTACTTGT+CGG | + | chr3_4:34861584-34861603 | Msa0498450:intron | 25.0% |
! | TCAGGAACTTCATATATAAA+TGG | - | chr3_4:34861613-34861632 | None:intergenic | 25.0% |
! | TATTATTAAAAGAGGTTAGC+TGG | + | chr3_4:34861647-34861666 | Msa0498450:three_prime_UTR | 25.0% |
!! | ATTATTAAAAGAGGTTAGCT+GGG | + | chr3_4:34861648-34861667 | Msa0498450:three_prime_UTR | 25.0% |
! | TATATGTGAGACTATTTGAA+AGG | + | chr3_4:34861807-34861826 | Msa0498450:three_prime_UTR | 25.0% |
! | ATATGTGAGACTATTTGAAA+GGG | + | chr3_4:34861808-34861827 | Msa0498450:three_prime_UTR | 25.0% |
TCTTCATTTACCATATTGTG+TGG | + | chr3_4:34853532-34853551 | Msa0498450:intron | 30.0% | |
TTCTCAGCTTCTTAAAATCA+CGG | - | chr3_4:34853976-34853995 | None:intergenic | 30.0% | |
!! | GATTTTAAGAAGCTGAGAAT+TGG | + | chr3_4:34853977-34853996 | Msa0498450:intron | 30.0% |
ATAATATGTGTCTGTTTGGA+GGG | - | chr3_4:34854062-34854081 | None:intergenic | 30.0% | |
AATAATATGTGTCTGTTTGG+AGG | - | chr3_4:34854063-34854082 | None:intergenic | 30.0% | |
! | TTGATTTTGTAGGAAGTTCT+TGG | + | chr3_4:34854130-34854149 | Msa0498450:intron | 30.0% |
TTAAGACACACTAATCACTT+AGG | - | chr3_4:34854270-34854289 | None:intergenic | 30.0% | |
ATATCTGCTAGCAGAATATT+TGG | + | chr3_4:34854348-34854367 | Msa0498450:CDS | 30.0% | |
AGCAGATCTAATTATCTTGA+AGG | + | chr3_4:34854393-34854412 | Msa0498450:CDS | 30.0% | |
!!! | AATTGTTATTTTTAGGGAGC+TGG | + | chr3_4:34854549-34854568 | Msa0498450:intron | 30.0% |
GTAAAGCAATCATTCTCTAT+AGG | + | chr3_4:34854628-34854647 | Msa0498450:intron | 30.0% | |
TTATTGATCAATGCATGTGT+TGG | + | chr3_4:34854836-34854855 | Msa0498450:intron | 30.0% | |
TCTTATAGGTACTAATGTGA+TGG | - | chr3_4:34855248-34855267 | None:intergenic | 30.0% | |
TAGTACCTATAAGAAAACTC+AGG | + | chr3_4:34855254-34855273 | Msa0498450:CDS | 30.0% | |
TTCTAAATGTTCAATGACAG+TGG | - | chr3_4:34855304-34855323 | None:intergenic | 30.0% | |
! | AGTCTCATGTTTTCTAAATG+GGG | + | chr3_4:34855354-34855373 | Msa0498450:intron | 30.0% |
GTTACAACTGAGAATTTCAA+TGG | - | chr3_4:34855450-34855469 | None:intergenic | 30.0% | |
!!! | CTAAAACCTTTTTGGTTTTG+TGG | + | chr3_4:34855513-34855532 | Msa0498450:intron | 30.0% |
AATACACCACAAAACCAAAA+AGG | - | chr3_4:34855522-34855541 | None:intergenic | 30.0% | |
! | TTTGGATTTCATACTGATTG+TGG | + | chr3_4:34855618-34855637 | Msa0498450:CDS | 30.0% |
AGAAATTCTTTGTGAGATTG+TGG | - | chr3_4:34855686-34855705 | None:intergenic | 30.0% | |
CGAAATGCTTGAATTTACTA+GGG | - | chr3_4:34856207-34856226 | None:intergenic | 30.0% | |
TCGAAATGCTTGAATTTACT+AGG | - | chr3_4:34856208-34856227 | None:intergenic | 30.0% | |
GTATAGTTTAAACACAGTTC+GGG | - | chr3_4:34856373-34856392 | None:intergenic | 30.0% | |
CGTATAGTTTAAACACAGTT+CGG | - | chr3_4:34856374-34856393 | None:intergenic | 30.0% | |
TCTGAATGAACAAGATGAAA+AGG | + | chr3_4:34856524-34856543 | Msa0498450:intron | 30.0% | |
GAAGAAAAAACCAACAAACA+AGG | + | chr3_4:34856614-34856633 | Msa0498450:intron | 30.0% | |
! | TCAGTTTAGAGAGAAGTATA+AGG | - | chr3_4:34856780-34856799 | None:intergenic | 30.0% |
!!! | TTTTTTAGGATTTTGCTTCG+AGG | - | chr3_4:34856847-34856866 | None:intergenic | 30.0% |
CAAAATCCTAAAAAACACAG+TGG | + | chr3_4:34856852-34856871 | Msa0498450:intron | 30.0% | |
TATATTGGAGTATACACTTG+GGG | - | chr3_4:34857096-34857115 | None:intergenic | 30.0% | |
GATATATTGGAGTATACACT+TGG | - | chr3_4:34857098-34857117 | None:intergenic | 30.0% | |
TCAAAGGATATTATGAAGCA+TGG | + | chr3_4:34857368-34857387 | Msa0498450:intron | 30.0% | |
TAGGAAACTAGAATTCTTAC+CGG | + | chr3_4:34857537-34857556 | Msa0498450:intron | 30.0% | |
ATAGAATTCTTACCGGAATT+AGG | + | chr3_4:34857567-34857586 | Msa0498450:intron | 30.0% | |
!! | CTAGTTTTCTATCCTAATTC+CGG | - | chr3_4:34857582-34857601 | None:intergenic | 30.0% |
GATTCAAAGTTGTATCAAAG+AGG | - | chr3_4:34857771-34857790 | None:intergenic | 30.0% | |
TAAACTTCATGGAAAAGAGA+AGG | - | chr3_4:34857815-34857834 | None:intergenic | 30.0% | |
! | TAAACTACCTTCTCTTTTGA+AGG | - | chr3_4:34857995-34858014 | None:intergenic | 30.0% |
!!! | TCGAGTTGAGATTTTATCAA+AGG | - | chr3_4:34858019-34858038 | None:intergenic | 30.0% |
!!! | TTTTAAGATGGGATGTAATG+AGG | - | chr3_4:34858125-34858144 | None:intergenic | 30.0% |
TATGAGTTTGAAAAGCTTGT+GGG | - | chr3_4:34858179-34858198 | None:intergenic | 30.0% | |
ATATGAGTTTGAAAAGCTTG+TGG | - | chr3_4:34858180-34858199 | None:intergenic | 30.0% | |
ACTCATATAATACGCAGTTA+CGG | + | chr3_4:34858192-34858211 | Msa0498450:intron | 30.0% | |
TTTGTTAGAATCATCCTCAA+AGG | - | chr3_4:34858478-34858497 | None:intergenic | 30.0% | |
TGGAACTAACTATCTACAAT+GGG | - | chr3_4:34858506-34858525 | None:intergenic | 30.0% | |
ATGGAACTAACTATCTACAA+TGG | - | chr3_4:34858507-34858526 | None:intergenic | 30.0% | |
!! | TTCCATTGAAGTGTTTTGAA+GGG | + | chr3_4:34858521-34858540 | Msa0498450:intron | 30.0% |
AGGGAGATTCAAATTCAAAT+GGG | + | chr3_4:34858697-34858716 | Msa0498450:intron | 30.0% | |
AGATTCAAATTCAAATGGGT+TGG | + | chr3_4:34858701-34858720 | Msa0498450:intron | 30.0% | |
CTCATTCAAACTCCTAAATT+AGG | - | chr3_4:34858983-34859002 | None:intergenic | 30.0% | |
ATAAAAAAAAAAGGGCAACC+CGG | - | chr3_4:34859398-34859417 | None:intergenic | 30.0% | |
GTTATTTAGATTATGGCCAT+TGG | + | chr3_4:34859469-34859488 | Msa0498450:intron | 30.0% | |
CGCTTGATTAGATTAAATTC+TGG | + | chr3_4:34859711-34859730 | Msa0498450:CDS | 30.0% | |
AATTGATGAGTGTTTCTCAA+AGG | + | chr3_4:34859923-34859942 | Msa0498450:CDS | 30.0% | |
!!! | AATGCTATTTTCAATGCAGT+AGG | - | chr3_4:34860140-34860159 | None:intergenic | 30.0% |
AAATAGCATTAAGATCGGTA+AGG | + | chr3_4:34860150-34860169 | Msa0498450:intron | 30.0% | |
TAATCACTGTAATTGGTCAT+TGG | - | chr3_4:34860551-34860570 | None:intergenic | 30.0% | |
ATCAGGAAAAAGAACAGAAA+TGG | + | chr3_4:34860602-34860621 | Msa0498450:intron | 30.0% | |
! | TGTTTAATATTGGTCTGTCT+AGG | + | chr3_4:34860637-34860656 | Msa0498450:intron | 30.0% |
ACTATCTGAATGTCTAAAGA+AGG | + | chr3_4:34860850-34860869 | Msa0498450:intron | 30.0% | |
TATCTTCAGATATCGTAGTT+CGG | - | chr3_4:34860901-34860920 | None:intergenic | 30.0% | |
!! | GTTTGCTTCAGATTTTAGTA+GGG | - | chr3_4:34861011-34861030 | None:intergenic | 30.0% |
!! | AGTTTGCTTCAGATTTTAGT+AGG | - | chr3_4:34861012-34861031 | None:intergenic | 30.0% |
ATTCGTATAACCAAAAAAGG+AGG | - | chr3_4:34861130-34861149 | None:intergenic | 30.0% | |
GAGATTCGTATAACCAAAAA+AGG | - | chr3_4:34861133-34861152 | None:intergenic | 30.0% | |
! | AGCTCTAATTCTTTGTCAAA+AGG | - | chr3_4:34861353-34861372 | None:intergenic | 30.0% |
TCATTTCAATTTCAAACAGG+TGG | + | chr3_4:34861471-34861490 | Msa0498450:intron | 30.0% | |
CATTTCAATTTCAAACAGGT+GGG | + | chr3_4:34861472-34861491 | Msa0498450:intron | 30.0% | |
GATATTTGTGTTTCTCTGTT+TGG | - | chr3_4:34861530-34861549 | None:intergenic | 30.0% | |
ACTCATAAACTAATCCAAAG+AGG | - | chr3_4:34861776-34861795 | None:intergenic | 30.0% | |
! | CTTTGAAAGTCCACACAATA+TGG | - | chr3_4:34853545-34853564 | None:intergenic | 35.0% |
CATATTGTGTGGACTTTCAA+AGG | + | chr3_4:34853543-34853562 | Msa0498450:intron | 35.0% | |
TTAAGTCACCAGAAAATGGT+AGG | - | chr3_4:34853574-34853593 | None:intergenic | 35.0% | |
GGAAATAGGATGAAAGTAAG+TGG | - | chr3_4:34853601-34853620 | None:intergenic | 35.0% | |
! | CTTAAAGAGTGTGAAGAGAA+TGG | - | chr3_4:34853638-34853657 | None:intergenic | 35.0% |
CATTCTCTTCACACTCTTTA+AGG | + | chr3_4:34853636-34853655 | Msa0498450:intron | 35.0% | |
TGCTTACATTCCAAATGAAC+AGG | + | chr3_4:34853789-34853808 | Msa0498450:intron | 35.0% | |
! | TCACGTTTTGCTTGAAATCA+CGG | - | chr3_4:34854029-34854048 | None:intergenic | 35.0% |
AGAAGAGATAGACCATGTAA+GGG | + | chr3_4:34854153-34854172 | Msa0498450:CDS | 35.0% | |
TCAAAGTGATTACCCTTACA+TGG | - | chr3_4:34854168-34854187 | None:intergenic | 35.0% | |
!!! | TTATTTTTAGGGAGCTGGTA+GGG | + | chr3_4:34854554-34854573 | Msa0498450:intron | 35.0% |
!! | GATTTGAGAGTATTCTATGG+TGG | + | chr3_4:34854594-34854613 | Msa0498450:CDS | 35.0% |
AAATGTTGGAAATAGACTCC+CGG | + | chr3_4:34854717-34854736 | Msa0498450:intron | 35.0% | |
TGTTAGACACTAATACGTGT+AGG | + | chr3_4:34854870-34854889 | Msa0498450:intron | 35.0% | |
! | CTTTAGATTAAAAGTGCGTC+CGG | - | chr3_4:34854899-34854918 | None:intergenic | 35.0% |
AAGTCATCTATCTTCATCCT+CGG | - | chr3_4:34854969-34854988 | None:intergenic | 35.0% | |
AAACAGTATTGTCACTGTAG+TGG | - | chr3_4:34855073-34855092 | None:intergenic | 35.0% | |
CTCATTAGGTTTATTGGAAC+TGG | - | chr3_4:34855111-34855130 | None:intergenic | 35.0% | |
AAAATCTGTACACCACTTCA+AGG | - | chr3_4:34855215-34855234 | None:intergenic | 35.0% | |
! | AAGTGGTGTACAGATTTTAC+TGG | + | chr3_4:34855217-34855236 | Msa0498450:CDS | 35.0% |
! | CAGAACCTGAGTTTTCTTAT+AGG | - | chr3_4:34855262-34855281 | None:intergenic | 35.0% |
TCTTGTCCATGGAATTTCAA+TGG | + | chr3_4:34855401-34855420 | Msa0498450:CDS | 35.0% | |
CTTGTCCATGGAATTTCAAT+GGG | + | chr3_4:34855402-34855421 | Msa0498450:CDS | 35.0% | |
! | TGAAATCCAAAACTTGCTTC+AGG | - | chr3_4:34855609-34855628 | None:intergenic | 35.0% |
! | TCATTTACACTTTGCTGTCA+TGG | - | chr3_4:34855718-34855737 | None:intergenic | 35.0% |
CGTTTGTATCCTGGAAATAA+AGG | + | chr3_4:34855846-34855865 | Msa0498450:intron | 35.0% | |
! | ACTAAAGCACCTTTATTTCC+AGG | - | chr3_4:34855858-34855877 | None:intergenic | 35.0% |
AGAGATCATGTCATTCATGT+AGG | + | chr3_4:34855977-34855996 | Msa0498450:intron | 35.0% | |
CATTCATGTAGGTGAATACT+TGG | + | chr3_4:34855988-34856007 | Msa0498450:intron | 35.0% | |
GAATGGAAAGGAATTAGTTG+CGG | + | chr3_4:34856030-34856049 | Msa0498450:CDS | 35.0% | |
!! | AACTCATTTTGTCACTTCTG+AGG | + | chr3_4:34856063-34856082 | Msa0498450:CDS | 35.0% |
!!! | ATTTTGTCACTTCTGAGGTT+TGG | + | chr3_4:34856068-34856087 | Msa0498450:intron | 35.0% |
TGGTTATGTTCTACTCTATC+TGG | + | chr3_4:34856088-34856107 | Msa0498450:intron | 35.0% | |
ATATGTGAGCAGTGAACATT+GGG | - | chr3_4:34856131-34856150 | None:intergenic | 35.0% | |
AACGAAGTGGAGTTTCATAA+CGG | - | chr3_4:34856241-34856260 | None:intergenic | 35.0% | |
CCAGTTACAAGATCAAGTTT+GGG | - | chr3_4:34856347-34856366 | None:intergenic | 35.0% | |
CCAAACTTGATCTTGTAACT+GGG | + | chr3_4:34856345-34856364 | Msa0498450:intron | 35.0% | |
CTTGTTCATTCAGATGTATG+AGG | - | chr3_4:34856518-34856537 | None:intergenic | 35.0% | |
TAGGGCAAATATCAGACATA+AGG | - | chr3_4:34856648-34856667 | None:intergenic | 35.0% | |
! | ACTACTATATTCTAAGGAGC+AGG | - | chr3_4:34856703-34856722 | None:intergenic | 35.0% |
TCTTATATCTGATACTACCC+TGG | + | chr3_4:34856728-34856747 | Msa0498450:intron | 35.0% | |
TTGCAGAATGAGTAAAACCA+GGG | - | chr3_4:34856748-34856767 | None:intergenic | 35.0% | |
TTTGCAGAATGAGTAAAACC+AGG | - | chr3_4:34856749-34856768 | None:intergenic | 35.0% | |
!!! | TTACTCCCACTGTGTTTTTT+AGG | - | chr3_4:34856861-34856880 | None:intergenic | 35.0% |
ACGAGATTAGTGGAAAACAT+GGG | + | chr3_4:34856927-34856946 | Msa0498450:intron | 35.0% | |
GTATCTGATACCCTTCTTAT+CGG | - | chr3_4:34857008-34857027 | None:intergenic | 35.0% | |
ATATTGGAGTATACACTTGG+GGG | - | chr3_4:34857095-34857114 | None:intergenic | 35.0% | |
AACAGGCCCTTAAGATATAT+TGG | - | chr3_4:34857111-34857130 | None:intergenic | 35.0% | |
ATTTGAGCTTCTCAACTGTT+TGG | + | chr3_4:34857142-34857161 | Msa0498450:intron | 35.0% | |
TTTGAGCTTCTCAACTGTTT+GGG | + | chr3_4:34857143-34857162 | Msa0498450:intron | 35.0% | |
ATGCATTCCAAGATTGCTTA+CGG | + | chr3_4:34857223-34857242 | Msa0498450:intron | 35.0% | |
TTTGAATGCTTCTAGTGCTT+AGG | - | chr3_4:34857353-34857372 | None:intergenic | 35.0% | |
!! | TAAGCACTAGAAGCATTCAA+AGG | + | chr3_4:34857352-34857371 | Msa0498450:intron | 35.0% |
!! | GTAATTACATGTGTCGGTTT+CGG | - | chr3_4:34857441-34857460 | None:intergenic | 35.0% |
CTAGTTTCCTATATGAAGCA+CGG | - | chr3_4:34857528-34857547 | None:intergenic | 35.0% | |
CTAGAATTCTTACCGGAATT+AGG | + | chr3_4:34857544-34857563 | Msa0498450:intron | 35.0% | |
TCCAACTCTTCTTTACTAAG+TGG | + | chr3_4:34857664-34857683 | Msa0498450:intron | 35.0% | |
ACCACTTAGTAAAGAAGAGT+TGG | - | chr3_4:34857668-34857687 | None:intergenic | 35.0% | |
!! | ATGGAAAAGAGAAGGTACTT+GGG | - | chr3_4:34857807-34857826 | None:intergenic | 35.0% |
!!! | AAGGTTTTTAAGATTGTCCG+CGG | - | chr3_4:34857976-34857995 | None:intergenic | 35.0% |
!! | ACAAGTTTGTTGAGAGATCT+AGG | - | chr3_4:34858086-34858105 | None:intergenic | 35.0% |
TCTATTCTCCAACTCATAAG+AGG | + | chr3_4:34858243-34858262 | Msa0498450:intron | 35.0% | |
TTCCACAGCTAAAGAGATTT+GGG | - | chr3_4:34858311-34858330 | None:intergenic | 35.0% | |
TTTCCACAGCTAAAGAGATT+TGG | - | chr3_4:34858312-34858331 | None:intergenic | 35.0% | |
TGAGGATGATTCTAACAAAC+TGG | + | chr3_4:34858479-34858498 | Msa0498450:intron | 35.0% | |
GAGGATGATTCTAACAAACT+GGG | + | chr3_4:34858480-34858499 | Msa0498450:intron | 35.0% | |
!! | GTTCCATTGAAGTGTTTTGA+AGG | + | chr3_4:34858520-34858539 | Msa0498450:intron | 35.0% |
TTCAGTGTTTGAACAAAGAC+TGG | + | chr3_4:34858568-34858587 | Msa0498450:intron | 35.0% | |
!! | GTTTGTTGTCTGACATGATA+TGG | + | chr3_4:34858590-34858609 | Msa0498450:intron | 35.0% |
GAGGGAGATTCAAATTCAAA+TGG | + | chr3_4:34858696-34858715 | Msa0498450:intron | 35.0% | |
!! | TTCAAATTCAAATGGGTTGG+CGG | + | chr3_4:34858704-34858723 | Msa0498450:intron | 35.0% |
AATATTACTGCCGAGAAACA+CGG | + | chr3_4:34858730-34858749 | Msa0498450:intron | 35.0% | |
!! | ATCTTCTAGTTTCAGTTTGC+AGG | - | chr3_4:34858764-34858783 | None:intergenic | 35.0% |
TGCAAACTGAAACTAGAAGA+TGG | + | chr3_4:34858763-34858782 | Msa0498450:intron | 35.0% | |
TGAAACTAGAAGATGGTGAT+GGG | + | chr3_4:34858770-34858789 | Msa0498450:intron | 35.0% | |
GAGAAAACAGAACCTTAGAA+AGG | - | chr3_4:34859134-34859153 | None:intergenic | 35.0% | |
!!! | TTCTAAGGTTCTGTTTTCTC+TGG | + | chr3_4:34859134-34859153 | Msa0498450:intron | 35.0% |
CACTATCTCTAGCAAACATA+TGG | - | chr3_4:34859633-34859652 | None:intergenic | 35.0% | |
!! | CTCAACAATTTTCTGGTACA+CGG | - | chr3_4:34859682-34859701 | None:intergenic | 35.0% |
!! | TCTCTAGCTCAACAATTTTC+TGG | - | chr3_4:34859689-34859708 | None:intergenic | 35.0% |
!! | AGTAACCTTTGGAGATTTTC+AGG | + | chr3_4:34859892-34859911 | Msa0498450:intron | 35.0% |
TTGCAAAGTCGTGTTCTTTA+TGG | + | chr3_4:34860010-34860029 | Msa0498450:intron | 35.0% | |
TGCAAAGTCGTGTTCTTTAT+GGG | + | chr3_4:34860011-34860030 | Msa0498450:intron | 35.0% | |
GAATCAAGCAAAGAAGGAAA+TGG | + | chr3_4:34860074-34860093 | Msa0498450:CDS | 35.0% | |
AAAGAAGGAAATGGATGGTT+AGG | + | chr3_4:34860083-34860102 | Msa0498450:CDS | 35.0% | |
!!! | CTTTTCAGTCCTTTTAAAGC+TGG | - | chr3_4:34860110-34860129 | None:intergenic | 35.0% |
CAAGTCTTCAATACAGTTCT+AGG | - | chr3_4:34860202-34860221 | None:intergenic | 35.0% | |
!!! | GCGTTGATTTAGTCTCTTTT+AGG | - | chr3_4:34860328-34860347 | None:intergenic | 35.0% |
! | TTAAGTAGCGTTGAACTTGT+GGG | + | chr3_4:34860366-34860385 | Msa0498450:intron | 35.0% |
TATGAGACTAATCTTTGCTC+GGG | - | chr3_4:34860467-34860486 | None:intergenic | 35.0% | |
CTATGAGACTAATCTTTGCT+CGG | - | chr3_4:34860468-34860487 | None:intergenic | 35.0% | |
CATGTTTCCGTTCTTTACAT+CGG | - | chr3_4:34860491-34860510 | None:intergenic | 35.0% | |
ATGTAAAGAACGGAAACATG+TGG | + | chr3_4:34860491-34860510 | Msa0498450:intron | 35.0% | |
TTATCAGTAGGAACCGAATT+CGG | - | chr3_4:34860779-34860798 | None:intergenic | 35.0% | |
GATATCTGAAGATATGTACG+AGG | + | chr3_4:34860907-34860926 | Msa0498450:intron | 35.0% | |
ATATGTACGAGGTAAATGTC+AGG | + | chr3_4:34860918-34860937 | Msa0498450:intron | 35.0% | |
TATAACCAAAAAAGGAGGAG+AGG | - | chr3_4:34861125-34861144 | None:intergenic | 35.0% | |
TAGGCATGCATATTCAAAAG+AGG | - | chr3_4:34861157-34861176 | None:intergenic | 35.0% | |
TCATCTACTTTGTCAAGTGA+TGG | - | chr3_4:34861305-34861324 | None:intergenic | 35.0% | |
CAAAGTAGATGATGAGAAGT+TGG | + | chr3_4:34861313-34861332 | Msa0498450:CDS | 35.0% | |
TGTAACTTCAGCTAGTATTG+TGG | + | chr3_4:34861682-34861701 | Msa0498450:intron | 35.0% | |
! | TGTTTCCTCTAGTTTCCAAA+TGG | + | chr3_4:34861718-34861737 | Msa0498450:intron | 35.0% |
! | GTTTCCTCTAGTTTCCAAAT+GGG | + | chr3_4:34861719-34861738 | Msa0498450:intron | 35.0% |
! | TTTCCTCTAGTTTCCAAATG+GGG | + | chr3_4:34861720-34861739 | Msa0498450:intron | 35.0% |
TAAGCTCAAAACACAAGGTA+TGG | - | chr3_4:34861915-34861934 | None:intergenic | 35.0% | |
!! | ATACCTTGTGTTTTGAGCTT+AGG | + | chr3_4:34861914-34861933 | Msa0498450:three_prime_UTR | 35.0% |
!! | TACCTTGTGTTTTGAGCTTA+GGG | + | chr3_4:34861915-34861934 | Msa0498450:three_prime_UTR | 35.0% |
! | AGGAAACACCTACCATTTTC+TGG | + | chr3_4:34853563-34853582 | Msa0498450:intron | 40.0% |
TGATCACTTGCCTGTTCATT+TGG | - | chr3_4:34853802-34853821 | None:intergenic | 40.0% | |
GAGAAGAGATAGACCATGTA+AGG | + | chr3_4:34854152-34854171 | Msa0498450:CDS | 40.0% | |
GAGATAGCATTCAACTGCTT+TGG | - | chr3_4:34854196-34854215 | None:intergenic | 40.0% | |
TAATTCAAGGTTGAGTAGGG+TGG | - | chr3_4:34854236-34854255 | None:intergenic | 40.0% | |
TGCTAGCAGATATACCTGAT+TGG | - | chr3_4:34854341-34854360 | None:intergenic | 40.0% | |
!!! | GTTATTTTTAGGGAGCTGGT+AGG | + | chr3_4:34854553-34854572 | Msa0498450:intron | 40.0% |
!! | GGGGATTTGAGAGTATTCTA+TGG | + | chr3_4:34854591-34854610 | Msa0498450:CDS | 40.0% |
TACTACTGGTGTCTACACAT+CGG | - | chr3_4:34854799-34854818 | None:intergenic | 40.0% | |
GTCATTCGATCTTCATCCAA+TGG | + | chr3_4:34855037-34855056 | Msa0498450:intron | 40.0% | |
ACAATACTGTTTGCGACTGT+AGG | + | chr3_4:34855081-34855100 | Msa0498450:intron | 40.0% | |
CAATACTGTTTGCGACTGTA+GGG | + | chr3_4:34855082-34855101 | Msa0498450:intron | 40.0% | |
TACTATCATTCTCGTTTGCC+AGG | + | chr3_4:34855648-34855667 | Msa0498450:CDS | 40.0% | |
ACTATCATTCTCGTTTGCCA+GGG | + | chr3_4:34855649-34855668 | Msa0498450:CDS | 40.0% | |
TTGTGGTTACCTAAAAACCC+TGG | - | chr3_4:34855669-34855688 | None:intergenic | 40.0% | |
!! | CTATCTGGTTTCCCTCATTT+TGG | + | chr3_4:34856103-34856122 | Msa0498450:intron | 40.0% |
AACATTGGGAGCCAAAATGA+GGG | - | chr3_4:34856117-34856136 | None:intergenic | 40.0% | |
CATATGTGAGCAGTGAACAT+TGG | - | chr3_4:34856132-34856151 | None:intergenic | 40.0% | |
GCTTTACTCTTTGCAGTGTT+CGG | - | chr3_4:34856185-34856204 | None:intergenic | 40.0% | |
ATGAAACTCCACTTCGTTGA+AGG | + | chr3_4:34856243-34856262 | Msa0498450:intron | 40.0% | |
TGAAACTCCACTTCGTTGAA+GGG | + | chr3_4:34856244-34856263 | Msa0498450:intron | 40.0% | |
CCCAAACTTGATCTTGTAAC+TGG | + | chr3_4:34856344-34856363 | Msa0498450:intron | 40.0% | |
CCCAGTTACAAGATCAAGTT+TGG | - | chr3_4:34856348-34856367 | None:intergenic | 40.0% | |
AAATGTTGATGTGACTCGAG+TGG | + | chr3_4:34856433-34856452 | Msa0498450:intron | 40.0% | |
ACAGATAGACACGAGATTAG+TGG | + | chr3_4:34856917-34856936 | Msa0498450:intron | 40.0% | |
CACGAGATTAGTGGAAAACA+TGG | + | chr3_4:34856926-34856945 | Msa0498450:intron | 40.0% | |
TGCTTCCATATCCGATAAGA+AGG | + | chr3_4:34856994-34857013 | Msa0498450:intron | 40.0% | |
GCTTCCATATCCGATAAGAA+GGG | + | chr3_4:34856995-34857014 | Msa0498450:intron | 40.0% | |
GATACCCTTCTTATCGGATA+TGG | - | chr3_4:34857002-34857021 | None:intergenic | 40.0% | |
TTGAGCTTCTCAACTGTTTG+GGG | + | chr3_4:34857144-34857163 | Msa0498450:intron | 40.0% | |
TCCAAGATTGCTTACGGAAA+CGG | + | chr3_4:34857229-34857248 | Msa0498450:intron | 40.0% | |
TTACCGGAATAACTGCTAGA+TGG | + | chr3_4:34857607-34857626 | Msa0498450:intron | 40.0% | |
AAGCCATCTAGCAGTTATTC+CGG | - | chr3_4:34857613-34857632 | None:intergenic | 40.0% | |
GAAAATTCCCCTTTACCTTG+TGG | + | chr3_4:34857691-34857710 | Msa0498450:intron | 40.0% | |
!! | TGGTTTTGCCACAAGGTAAA+GGG | - | chr3_4:34857702-34857721 | None:intergenic | 40.0% |
!! | ATGGTTTTGCCACAAGGTAA+AGG | - | chr3_4:34857703-34857722 | None:intergenic | 40.0% |
TCGAATAGTAAAGGACTCAG+AGG | - | chr3_4:34857740-34857759 | None:intergenic | 40.0% | |
! | GCGTACTGATCGAATAGTAA+AGG | - | chr3_4:34857749-34857768 | None:intergenic | 40.0% |
!! | CATGGAAAAGAGAAGGTACT+TGG | - | chr3_4:34857808-34857827 | None:intergenic | 40.0% |
AAACAATTGTGACCACTCTC+CGG | + | chr3_4:34858337-34858356 | Msa0498450:intron | 40.0% | |
GTTATGGAATTCCATGACTC+CGG | - | chr3_4:34858359-34858378 | None:intergenic | 40.0% | |
!!! | TTGGTGGGTTTTCTTCAATG+TGG | + | chr3_4:34858437-34858456 | Msa0498450:intron | 40.0% |
TCAGTTTGTCACAACCTTTG+AGG | + | chr3_4:34858461-34858480 | Msa0498450:intron | 40.0% | |
GACCCTTCAAAACACTTCAA+TGG | - | chr3_4:34858526-34858545 | None:intergenic | 40.0% | |
TGTTGTCTGACATGATATGG+AGG | + | chr3_4:34858593-34858612 | Msa0498450:intron | 40.0% | |
TGATTTACACTTTCCGAGGA+TGG | + | chr3_4:34858627-34858646 | Msa0498450:intron | 40.0% | |
GATTTACACTTTCCGAGGAT+GGG | + | chr3_4:34858628-34858647 | Msa0498450:intron | 40.0% | |
TGGTGCAAGTTCTGTTAGAT+GGG | + | chr3_4:34858662-34858681 | Msa0498450:intron | 40.0% | |
!! | TCAAATTCAAATGGGTTGGC+GGG | + | chr3_4:34858705-34858724 | Msa0498450:intron | 40.0% |
CTGAAACTAGAAGATGGTGA+TGG | + | chr3_4:34858769-34858788 | Msa0498450:intron | 40.0% | |
TCTATTATGTGATGTGGCCT+TGG | + | chr3_4:34859221-34859240 | Msa0498450:intron | 40.0% | |
GTTGTTGTCATGTGACTGAA+AGG | + | chr3_4:34859257-34859276 | Msa0498450:intron | 40.0% | |
AACAGCCTCTTGTGTAAAAC+AGG | + | chr3_4:34859300-34859319 | Msa0498450:intron | 40.0% | |
ACAGCCTCTTGTGTAAAACA+GGG | + | chr3_4:34859301-34859320 | Msa0498450:intron | 40.0% | |
! | CTTACCCTGTTTTACACAAG+AGG | - | chr3_4:34859308-34859327 | None:intergenic | 40.0% |
CTCTTGTGTAAAACAGGGTA+AGG | + | chr3_4:34859306-34859325 | Msa0498450:intron | 40.0% | |
CGTACAATACACCAAATGGT+GGG | + | chr3_4:34859332-34859351 | Msa0498450:intron | 40.0% | |
! | TTTTATGTGATGTGGCGCAA+CGG | + | chr3_4:34859412-34859431 | Msa0498450:intron | 40.0% |
AGTGCTCATCTCTCATTTAG+TGG | - | chr3_4:34859441-34859460 | None:intergenic | 40.0% | |
CGTAGTACAGTGCAATTTGA+CGG | - | chr3_4:34859870-34859889 | None:intergenic | 40.0% | |
TGTACTACGACAGTAACCTT+TGG | + | chr3_4:34859881-34859900 | Msa0498450:intron | 40.0% | |
GACTTCCTGAAAATCTCCAA+AGG | - | chr3_4:34859900-34859919 | None:intergenic | 40.0% | |
ACTGTTCGCTTCTCATGTAA+AGG | + | chr3_4:34860046-34860065 | Msa0498450:intron | 40.0% | |
GAAGCTGAATCAAGCAAAGA+AGG | + | chr3_4:34860068-34860087 | Msa0498450:CDS | 40.0% | |
CAAGCAAAGAAGGAAATGGA+TGG | + | chr3_4:34860078-34860097 | Msa0498450:CDS | 40.0% | |
!! | TGGTTAGGTCCAGCTTTAAA+AGG | + | chr3_4:34860098-34860117 | Msa0498450:CDS | 40.0% |
! | GTTAAGTAGCGTTGAACTTG+TGG | + | chr3_4:34860365-34860384 | Msa0498450:intron | 40.0% |
! | TAAGTAGCGTTGAACTTGTG+GGG | + | chr3_4:34860367-34860386 | Msa0498450:intron | 40.0% |
CTCATAGCCGATGTAAAGAA+CGG | + | chr3_4:34860481-34860500 | Msa0498450:intron | 40.0% | |
GGTCGTTTGGATATACTCTA+TGG | + | chr3_4:34860512-34860531 | Msa0498450:intron | 40.0% | |
! | AAGTCCGATAGTACCGAATT+CGG | + | chr3_4:34860763-34860782 | Msa0498450:intron | 40.0% |
TCTACTTTGTCAAGTGATGG+AGG | - | chr3_4:34861302-34861321 | None:intergenic | 40.0% | |
TCAATTTCAAACAGGTGGGA+TGG | + | chr3_4:34861476-34861495 | Msa0498450:intron | 40.0% | |
! | AGCAATGTGGTGGAGGAAAT+AGG | - | chr3_4:34853615-34853634 | None:intergenic | 45.0% |
AAGAGAATGGAGCAATGTGG+TGG | - | chr3_4:34853625-34853644 | None:intergenic | 45.0% | |
GTGAAGAGAATGGAGCAATG+TGG | - | chr3_4:34853628-34853647 | None:intergenic | 45.0% | |
ATATGTGTCTGTTTGGAGGG+CGG | - | chr3_4:34854059-34854078 | None:intergenic | 45.0% | |
TCGTGCTTCATAAGCTTTGC+CGG | - | chr3_4:34854739-34854758 | None:intergenic | 45.0% | |
!! | ATCGGTGTCAGAATCATGTC+CGG | - | chr3_4:34854781-34854800 | None:intergenic | 45.0% |
CACTAATACGTGTAGGACAC+CGG | + | chr3_4:34854877-34854896 | Msa0498450:intron | 45.0% | |
TCGCTGCTACATTGTCATTG+AGG | + | chr3_4:34854921-34854940 | Msa0498450:intron | 45.0% | |
CAGTATTGTCACTGTAGTGG+TGG | - | chr3_4:34855070-34855089 | None:intergenic | 45.0% | |
!! | GGGTGCTGTTATGTTACATC+AGG | + | chr3_4:34855374-34855393 | Msa0498450:intron | 45.0% |
GTCCATGGAATTTCAATGGG+TGG | + | chr3_4:34855405-34855424 | Msa0498450:CDS | 45.0% | |
CTCCACCCATTGAAATTCCA+TGG | - | chr3_4:34855410-34855429 | None:intergenic | 45.0% | |
CATGGAATTTCAATGGGTGG+AGG | + | chr3_4:34855408-34855427 | Msa0498450:CDS | 45.0% | |
! | GCTACTCCTGAAGCAAGTTT+TGG | + | chr3_4:34855600-34855619 | Msa0498450:CDS | 45.0% |
! | TCTCGTTTGCCAGGGTTTTT+AGG | + | chr3_4:34855657-34855676 | Msa0498450:CDS | 45.0% |
CTTCGTGATCGTTTGTATCC+TGG | + | chr3_4:34855837-34855856 | Msa0498450:intron | 45.0% | |
GAACATTGGGAGCCAAAATG+AGG | - | chr3_4:34856118-34856137 | None:intergenic | 45.0% | |
CGTATTACTGGAGGGGAATT+GGG | - | chr3_4:34856157-34856176 | None:intergenic | 45.0% | |
ACGTATTACTGGAGGGGAAT+TGG | - | chr3_4:34856158-34856177 | None:intergenic | 45.0% | |
ATTCCCCTCCAGTAATACGT+AGG | + | chr3_4:34856158-34856177 | Msa0498450:intron | 45.0% | |
TGTTCGGTCCTACGTATTAC+TGG | - | chr3_4:34856169-34856188 | None:intergenic | 45.0% | |
!! | GATTGGATGGGCTAAGAAGA+AGG | - | chr3_4:34856819-34856838 | None:intergenic | 45.0% |
TTCGAGGATGACGATTGGAT+GGG | - | chr3_4:34856831-34856850 | None:intergenic | 45.0% | |
TTTGCTTCGAGGATGACGAT+TGG | - | chr3_4:34856836-34856855 | None:intergenic | 45.0% | |
TGAGCTTCTCAACTGTTTGG+GGG | + | chr3_4:34857145-34857164 | Msa0498450:intron | 45.0% | |
TATGAAGCATGGACACTCCT+CGG | + | chr3_4:34857379-34857398 | Msa0498450:intron | 45.0% | |
AGAAGAGTTGGAACGTCTAC+AGG | - | chr3_4:34857656-34857675 | None:intergenic | 45.0% | |
! | GGTTTTGCCACAAGGTAAAG+GGG | - | chr3_4:34857701-34857720 | None:intergenic | 45.0% |
AGAGGTTGTGAAAGATGGCA+TGG | - | chr3_4:34857722-34857741 | None:intergenic | 45.0% | |
GACTCAGAGGTTGTGAAAGA+TGG | - | chr3_4:34857727-34857746 | None:intergenic | 45.0% | |
!! | GAAAAGAGAAGGTACTTGGG+CGG | - | chr3_4:34857804-34857823 | None:intergenic | 45.0% |
! | GAAAGTCTAGCTCGTGTCTT+GGG | - | chr3_4:34857949-34857968 | None:intergenic | 45.0% |
! | AGAAAGTCTAGCTCGTGTCT+TGG | - | chr3_4:34857950-34857969 | None:intergenic | 45.0% |
CTCCCAAATCTCTTTAGCTG+TGG | + | chr3_4:34858306-34858325 | Msa0498450:intron | 45.0% | |
TTGAAGGGTCCAACTCTAGT+AGG | + | chr3_4:34858536-34858555 | Msa0498450:intron | 45.0% | |
TCACACTGACCTACTAGAGT+TGG | - | chr3_4:34858548-34858567 | None:intergenic | 45.0% | |
AGCGTGATTTACACTTTCCG+AGG | + | chr3_4:34858623-34858642 | Msa0498450:intron | 45.0% | |
GTGGTGCAAGTTCTGTTAGA+TGG | + | chr3_4:34858661-34858680 | Msa0498450:intron | 45.0% | |
CTGTTTATAATCGCCGCAGA+AGG | + | chr3_4:34858807-34858826 | Msa0498450:intron | 45.0% | |
TTTATAATCGCCGCAGAAGG+TGG | + | chr3_4:34858810-34858829 | Msa0498450:intron | 45.0% | |
TCTTCTGCATCAGAAAACCC+TGG | - | chr3_4:34858836-34858855 | None:intergenic | 45.0% | |
GACTCGGCTATACCTTTCTA+AGG | + | chr3_4:34859119-34859138 | Msa0498450:intron | 45.0% | |
GTCATGTGACTGAAAGGTCA+CGG | + | chr3_4:34859263-34859282 | Msa0498450:intron | 45.0% | |
TCATGTGACTGAAAGGTCAC+GGG | + | chr3_4:34859264-34859283 | Msa0498450:intron | 45.0% | |
! | TTACACAAGAGGCTGTTTCC+AGG | - | chr3_4:34859297-34859316 | None:intergenic | 45.0% |
GCTGCGTACAATACACCAAA+TGG | + | chr3_4:34859328-34859347 | Msa0498450:intron | 45.0% | |
GCGTACAATACACCAAATGG+TGG | + | chr3_4:34859331-34859350 | Msa0498450:intron | 45.0% | |
TGGCCATTGGAAATGCTCTA+AGG | + | chr3_4:34859482-34859501 | Msa0498450:intron | 45.0% | |
GGCCATTGGAAATGCTCTAA+GGG | + | chr3_4:34859483-34859502 | Msa0498450:intron | 45.0% | |
! | CACCCTTAGAGCATTTCCAA+TGG | - | chr3_4:34859488-34859507 | None:intergenic | 45.0% |
!! | AACGCAAAGTGTTGCTCAGT+TGG | + | chr3_4:34860343-34860362 | Msa0498450:intron | 45.0% |
TAGCTGCCGAATACACTGTT+TGG | + | chr3_4:34860406-34860425 | Msa0498450:intron | 45.0% | |
AGCTGCCGAATACACTGTTT+GGG | + | chr3_4:34860407-34860426 | Msa0498450:intron | 45.0% | |
AACGGAAACATGTGGTCGTT+TGG | + | chr3_4:34860499-34860518 | Msa0498450:intron | 45.0% | |
TATACTCTTGGATACCACCG+AGG | + | chr3_4:34860695-34860714 | Msa0498450:intron | 45.0% | |
GGAACCGAATTCGGTACTAT+CGG | - | chr3_4:34860770-34860789 | None:intergenic | 45.0% | |
GGATATGTGCAGATTCGTGA+AGG | + | chr3_4:34860815-34860834 | Msa0498450:intron | 45.0% | |
ATGTGCAGATTCGTGAAGGA+AGG | + | chr3_4:34860819-34860838 | Msa0498450:intron | 45.0% | |
TAGAGCTCTCACCATTGACA+AGG | + | chr3_4:34861059-34861078 | Msa0498450:CDS | 45.0% | |
!! | TGGAGCATTGTCCTTGTCAA+TGG | - | chr3_4:34861073-34861092 | None:intergenic | 45.0% |
TGACAAGGACAATGCTCCAA+AGG | + | chr3_4:34861074-34861093 | Msa0498450:CDS | 45.0% | |
AATGAGCGAGAGACTACCTT+TGG | - | chr3_4:34861093-34861112 | None:intergenic | 45.0% | |
!!! | GTGAACCTCTCCTCCTTTTT+TGG | + | chr3_4:34861117-34861136 | Msa0498450:intron | 45.0% |
GCTTCAGATTCCAGAAAGTG+TGG | + | chr3_4:34861370-34861389 | Msa0498450:CDS | 45.0% | |
! | TTCCAGAAAGTGTGGAATGC+AGG | + | chr3_4:34861378-34861397 | Msa0498450:CDS | 45.0% |
AACCTGCATTCCACACTTTC+TGG | - | chr3_4:34861383-34861402 | None:intergenic | 45.0% | |
! | AGAAAGTGTGGAATGCAGGT+TGG | + | chr3_4:34861382-34861401 | Msa0498450:intron | 45.0% |
GTTCCCCATTTGGAAACTAG+AGG | - | chr3_4:34861726-34861745 | None:intergenic | 45.0% | |
CTTGAGTGATGTTCCCCATT+TGG | - | chr3_4:34861736-34861755 | None:intergenic | 45.0% | |
CTCAAGAGCAGCAGCATTAA+AGG | + | chr3_4:34861750-34861769 | Msa0498450:three_prime_UTR | 45.0% | |
AGCAGCATTAAAGGCCTCTT+TGG | + | chr3_4:34861759-34861778 | Msa0498450:three_prime_UTR | 45.0% | |
GCTCAAAACACAAGGTATGG+AGG | - | chr3_4:34861912-34861931 | None:intergenic | 45.0% | |
GACCCTAAGCTCAAAACACA+AGG | - | chr3_4:34861920-34861939 | None:intergenic | 45.0% | |
!! | AAAATATATAATAACTAATA+GGG | - | chr3_4:34854466-34854485 | None:intergenic | 5.0% |
!! | TAAAATATATAATAACTAAT+AGG | - | chr3_4:34854467-34854486 | None:intergenic | 5.0% |
!!! | ATTATTTTTTATTTTTGAAA+TGG | + | chr3_4:34859074-34859093 | Msa0498450:intron | 5.0% |
!!! | TTATTTTTTATTTTTGAAAT+GGG | + | chr3_4:34859075-34859094 | Msa0498450:intron | 5.0% |
!! | AATATAAATTAAAATTATTC+AGG | - | chr3_4:34861631-34861650 | None:intergenic | 5.0% |
!! | TTAATTTATATTATTAAAAG+AGG | + | chr3_4:34861639-34861658 | Msa0498450:three_prime_UTR | 5.0% |
AGAATGGAGCAATGTGGTGG+AGG | - | chr3_4:34853622-34853641 | None:intergenic | 50.0% | |
GAATGCTATCTCACCTGACC+TGG | + | chr3_4:34854204-34854223 | Msa0498450:CDS | 50.0% | |
! | TGAGTAGGGTGGACTTTACC+AGG | - | chr3_4:34854225-34854244 | None:intergenic | 50.0% |
CGTGCTTCATAAGCTTTGCC+GGG | - | chr3_4:34854738-34854757 | None:intergenic | 50.0% | |
CACAGACACAAACACCACAC+CGG | + | chr3_4:34854759-34854778 | Msa0498450:intron | 50.0% | |
TGTCAGAATCATGTCCGGTG+TGG | - | chr3_4:34854776-34854795 | None:intergenic | 50.0% | |
!! | GTCACTGTAGTGGTGGATGT+CGG | - | chr3_4:34855063-34855082 | None:intergenic | 50.0% |
TACTGTTTGCGACTGTAGGG+AGG | + | chr3_4:34855085-34855104 | Msa0498450:intron | 50.0% | |
AGGGGATTCATGCCTTGAAG+TGG | + | chr3_4:34855200-34855219 | Msa0498450:intron | 50.0% | |
! | CATCAGGTTGCTCTTGTCCA+TGG | + | chr3_4:34855390-34855409 | Msa0498450:intron | 50.0% |
GGTGAATACTTGGCGCTTAC+TGG | + | chr3_4:34855998-34856017 | Msa0498450:intron | 50.0% | |
GGAAAGGAATTAGTTGCGGC+TGG | + | chr3_4:34856034-34856053 | Msa0498450:CDS | 50.0% | |
GGTCCTACGTATTACTGGAG+GGG | - | chr3_4:34856164-34856183 | None:intergenic | 50.0% | |
CGGTCCTACGTATTACTGGA+GGG | - | chr3_4:34856165-34856184 | None:intergenic | 50.0% | |
TCGGTCCTACGTATTACTGG+AGG | - | chr3_4:34856166-34856185 | None:intergenic | 50.0% | |
! | GGCTCTGCAACCTTGTTTGT+TGG | - | chr3_4:34856627-34856646 | None:intergenic | 50.0% |
CTTCGAGGATGACGATTGGA+TGG | - | chr3_4:34856832-34856851 | None:intergenic | 50.0% | |
GCCGTTTCCGTAAGCAATCT+TGG | - | chr3_4:34857233-34857252 | None:intergenic | 50.0% | |
TCTAGTGCTTAGGCCCTCTT+TGG | - | chr3_4:34857343-34857362 | None:intergenic | 50.0% | |
!! | TCCTCGGATTAAGAGTGTCC+CGG | + | chr3_4:34857395-34857414 | Msa0498450:intron | 50.0% |
CCTATATGAAGCACGGACAC+CGG | - | chr3_4:34857521-34857540 | None:intergenic | 50.0% | |
GGAACGTCTACAGGCTCTTA+TGG | - | chr3_4:34857647-34857666 | None:intergenic | 50.0% | |
!! | GATGGCATGGTTTTGCCACA+AGG | - | chr3_4:34857709-34857728 | None:intergenic | 50.0% |
GATCGTTGGGTGGTCATTGT+AGG | - | chr3_4:34857867-34857886 | None:intergenic | 50.0% | |
TGACCACCCAACGATCTTCA+CGG | + | chr3_4:34857871-34857890 | Msa0498450:intron | 50.0% | |
AAGCCTCCGTGAAGATCGTT+GGG | - | chr3_4:34857880-34857899 | None:intergenic | 50.0% | |
AAAGCCTCCGTGAAGATCGT+TGG | - | chr3_4:34857881-34857900 | None:intergenic | 50.0% | |
GAGCTAGACTTTCTTCACCG+CGG | + | chr3_4:34857956-34857975 | Msa0498450:intron | 50.0% | |
! | GAAAAGCTTGTGGGCTGAGT+TGG | - | chr3_4:34858170-34858189 | None:intergenic | 50.0% |
AATTCCATGACTCCGGAGAG+TGG | - | chr3_4:34858352-34858371 | None:intergenic | 50.0% | |
ACACAACTCTCTCCCATCCT+CGG | - | chr3_4:34858643-34858662 | None:intergenic | 50.0% | |
TGTTAGATGGGCCTGATCAG+TGG | + | chr3_4:34858674-34858693 | Msa0498450:intron | 50.0% | |
TGAATCTCCCTCCACTGATC+AGG | - | chr3_4:34858688-34858707 | None:intergenic | 50.0% | |
!! | CTAGAAGATGGTGATGGGCA+TGG | + | chr3_4:34858775-34858794 | Msa0498450:intron | 50.0% |
CAACTTTACCAGTTGCGCCA+AGG | - | chr3_4:34859241-34859260 | None:intergenic | 50.0% | |
! | TAGCGTTGAACTTGTGGGGA+TGG | + | chr3_4:34860371-34860390 | Msa0498450:intron | 50.0% |
TGCCGAATACACTGTTTGGG+AGG | + | chr3_4:34860410-34860429 | Msa0498450:intron | 50.0% | |
GCCGAATACACTGTTTGGGA+GGG | + | chr3_4:34860411-34860430 | Msa0498450:intron | 50.0% | |
CCCCTCCCAAACAGTGTATT+CGG | - | chr3_4:34860415-34860434 | None:intergenic | 50.0% | |
CCGAATACACTGTTTGGGAG+GGG | + | chr3_4:34860412-34860431 | Msa0498450:intron | 50.0% | |
CGAATACACTGTTTGGGAGG+GGG | + | chr3_4:34860413-34860432 | Msa0498450:intron | 50.0% | |
GAATACACTGTTTGGGAGGG+GGG | + | chr3_4:34860414-34860433 | Msa0498450:intron | 50.0% | |
CTAACACGCACACGCATCAT+AGG | - | chr3_4:34861176-34861195 | None:intergenic | 50.0% | |
CTATGATGCGTGTGCGTGTT+AGG | + | chr3_4:34861174-34861193 | Msa0498450:intron | 50.0% | |
! | AGGGTGGACTTTACCAGGTC+AGG | - | chr3_4:34854220-34854239 | None:intergenic | 55.0% |
GTAGGGCTTTCTGTGCTGGA+GGG | + | chr3_4:34854571-34854590 | Msa0498450:CDS | 55.0% | |
TAGGGCTTTCTGTGCTGGAG+GGG | + | chr3_4:34854572-34854591 | Msa0498450:CDS | 55.0% | |
AGCAGTCACGATTTCGACCG+AGG | + | chr3_4:34854949-34854968 | Msa0498450:intron | 55.0% | |
!! | TAGTGGTGGATGTCGGCCAT+TGG | - | chr3_4:34855056-34855075 | None:intergenic | 55.0% |
CTTACTGGAGCGCGGTTGAA+TGG | + | chr3_4:34856013-34856032 | Msa0498450:intron | 55.0% | |
TGGAGCGCGGTTGAATGGAA+AGG | + | chr3_4:34856018-34856037 | Msa0498450:intron | 55.0% | |
GGAATTAGTTGCGGCTGGAC+TGG | + | chr3_4:34856039-34856058 | Msa0498450:CDS | 55.0% | |
GTCGACACCCTTCAACGAAG+TGG | - | chr3_4:34856254-34856273 | None:intergenic | 55.0% | |
!! | TCGTTGAAGGGTGTCGACAC+AGG | + | chr3_4:34856256-34856275 | Msa0498450:intron | 55.0% |
ACCGGGACACTCTTAATCCG+AGG | - | chr3_4:34857399-34857418 | None:intergenic | 55.0% | |
CCGGTGTCCGTGCTTCATAT+AGG | + | chr3_4:34857518-34857537 | Msa0498450:intron | 55.0% | |
GAGGATGGGAGAGAGTTGTG+TGG | + | chr3_4:34858642-34858661 | Msa0498450:intron | 55.0% | |
TAGATGGGCCTGATCAGTGG+AGG | + | chr3_4:34858677-34858696 | Msa0498450:intron | 55.0% | |
AGATGGGCCTGATCAGTGGA+GGG | + | chr3_4:34858678-34858697 | Msa0498450:intron | 55.0% | |
TTACTGCCGAGAAACACGGC+AGG | + | chr3_4:34858734-34858753 | Msa0498450:intron | 55.0% | |
GGCTATCCTGCCGTGTTTCT+CGG | - | chr3_4:34858743-34858762 | None:intergenic | 55.0% | |
!! | GGTGATGGGCATGGTTTGCA+AGG | + | chr3_4:34858784-34858803 | Msa0498450:intron | 55.0% |
AAAACCCTGGCCACCTTCTG+CGG | - | chr3_4:34858823-34858842 | None:intergenic | 55.0% | |
AAGGTCACGGGTTCAAGTCC+TGG | + | chr3_4:34859276-34859295 | Msa0498450:intron | 55.0% | |
CTAGAGCTCCCGCATATGCA+GGG | - | chr3_4:34859371-34859390 | None:intergenic | 55.0% | |
ACTAGAGCTCCCGCATATGC+AGG | - | chr3_4:34859372-34859391 | None:intergenic | 55.0% | |
CAACCACTTGCGCTAGACCT+CGG | - | chr3_4:34860715-34860734 | None:intergenic | 55.0% | |
GCTGGTAGGGCTTTCTGTGC+TGG | + | chr3_4:34854567-34854586 | Msa0498450:CDS | 60.0% | |
GGTAGGGCTTTCTGTGCTGG+AGG | + | chr3_4:34854570-34854589 | Msa0498450:CDS | 60.0% | |
ACTTGGCGCTTACTGGAGCG+CGG | + | chr3_4:34856005-34856024 | Msa0498450:intron | 60.0% | |
CAGACACTGACACGCCGACA+TGG | - | chr3_4:34857495-34857514 | None:intergenic | 60.0% | |
GGCGTGTCAGTGTCTGTGTC+CGG | + | chr3_4:34857499-34857518 | Msa0498450:intron | 60.0% | |
! | AAGGTACTTGGGCGGCGCAA+TGG | - | chr3_4:34857796-34857815 | None:intergenic | 60.0% |
CCTCCGTGAAGATCGTTGGG+TGG | - | chr3_4:34857877-34857896 | None:intergenic | 60.0% | |
CCACCCAACGATCTTCACGG+AGG | + | chr3_4:34857874-34857893 | Msa0498450:intron | 60.0% | |
GTGACCACTCTCCGGAGTCA+TGG | + | chr3_4:34858345-34858364 | Msa0498450:intron | 60.0% | |
! | TGATGTGGCCTTGGCGCAAC+TGG | + | chr3_4:34859230-34859249 | Msa0498450:intron | 60.0% |
! | CAAATGGTGGGACCCCTTCC+CGG | + | chr3_4:34859344-34859363 | Msa0498450:intron | 60.0% |
CATATGCAGGGTCCGGGAAG+GGG | - | chr3_4:34859359-34859378 | None:intergenic | 60.0% | |
GCATATGCAGGGTCCGGGAA+GGG | - | chr3_4:34859360-34859379 | None:intergenic | 60.0% | |
CTTCCCGGACCCTGCATATG+CGG | + | chr3_4:34859359-34859378 | Msa0498450:intron | 60.0% | |
TTCCCGGACCCTGCATATGC+GGG | + | chr3_4:34859360-34859379 | Msa0498450:intron | 60.0% | |
! | ATGCGGGAGCTCTAGTGCAC+CGG | + | chr3_4:34859376-34859395 | Msa0498450:intron | 60.0% |
! | TCCCGGTGTCAGACACGCGT+CGG | + | chr3_4:34857412-34857431 | Msa0498450:intron | 65.0% |
ACCGACGCGTGTCTGACACC+GGG | - | chr3_4:34857416-34857435 | None:intergenic | 65.0% | |
CACCGACGCGTGTCTGACAC+CGG | - | chr3_4:34857417-34857436 | None:intergenic | 65.0% | |
GTACTTGGGCGGCGCAATGG+AGG | - | chr3_4:34857793-34857812 | None:intergenic | 65.0% | |
AATCGCCGCAGAAGGTGGCC+AGG | + | chr3_4:34858815-34858834 | Msa0498450:intron | 65.0% | |
ATCGCCGCAGAAGGTGGCCA+GGG | + | chr3_4:34858816-34858835 | Msa0498450:intron | 65.0% | |
CGGGAAGGGGTCCCACCATT+TGG | - | chr3_4:34859346-34859365 | None:intergenic | 65.0% | |
CGCATATGCAGGGTCCGGGA+AGG | - | chr3_4:34859361-34859380 | None:intergenic | 65.0% | |
CTCCCGCATATGCAGGGTCC+GGG | - | chr3_4:34859365-34859384 | None:intergenic | 65.0% | |
GCTCCCGCATATGCAGGGTC+CGG | - | chr3_4:34859366-34859385 | None:intergenic | 65.0% | |
! | TGCGGGAGCTCTAGTGCACC+GGG | + | chr3_4:34859377-34859396 | Msa0498450:intron | 65.0% |
CCACTTGCGCTAGACCTCGG+TGG | - | chr3_4:34860712-34860731 | None:intergenic | 65.0% | |
CCACCGAGGTCTAGCGCAAG+TGG | + | chr3_4:34860709-34860728 | Msa0498450:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_4 | gene | 34853435 | 34861941 | 34853435 | ID=Msa0498450;Name=Msa0498450 |
chr3_4 | mRNA | 34853435 | 34861941 | 34853435 | ID=Msa0498450-mRNA-1;Parent=Msa0498450;Name=Msa0498450-mRNA-1;_AED=0.27;_eAED=0.27;_QI=0|0.68|0.76|0.88|0.56|0.58|17|316|344 |
chr3_4 | exon | 34853435 | 34853440 | 34853435 | ID=Msa0498450-mRNA-1:exon:7350;Parent=Msa0498450-mRNA-1 |
chr3_4 | exon | 34853492 | 34853497 | 34853492 | ID=Msa0498450-mRNA-1:exon:7351;Parent=Msa0498450-mRNA-1 |
chr3_4 | exon | 34854142 | 34854225 | 34854142 | ID=Msa0498450-mRNA-1:exon:7352;Parent=Msa0498450-mRNA-1 |
chr3_4 | exon | 34854346 | 34854417 | 34854346 | ID=Msa0498450-mRNA-1:exon:7353;Parent=Msa0498450-mRNA-1 |
chr3_4 | exon | 34854564 | 34854627 | 34854564 | ID=Msa0498450-mRNA-1:exon:7354;Parent=Msa0498450-mRNA-1 |
chr3_4 | exon | 34855202 | 34855275 | 34855202 | ID=Msa0498450-mRNA-1:exon:7355;Parent=Msa0498450-mRNA-1 |
chr3_4 | exon | 34855396 | 34855479 | 34855396 | ID=Msa0498450-mRNA-1:exon:7356;Parent=Msa0498450-mRNA-1 |
chr3_4 | exon | 34855594 | 34855678 | 34855594 | ID=Msa0498450-mRNA-1:exon:7357;Parent=Msa0498450-mRNA-1 |
chr3_4 | exon | 34856023 | 34856084 | 34856023 | ID=Msa0498450-mRNA-1:exon:7358;Parent=Msa0498450-mRNA-1 |
chr3_4 | exon | 34859690 | 34859811 | 34859690 | ID=Msa0498450-mRNA-1:exon:7359;Parent=Msa0498450-mRNA-1 |
chr3_4 | exon | 34859914 | 34859974 | 34859914 | ID=Msa0498450-mRNA-1:exon:7360;Parent=Msa0498450-mRNA-1 |
chr3_4 | exon | 34860068 | 34860166 | 34860068 | ID=Msa0498450-mRNA-1:exon:7361;Parent=Msa0498450-mRNA-1 |
chr3_4 | exon | 34861054 | 34861095 | 34861054 | ID=Msa0498450-mRNA-1:exon:7362;Parent=Msa0498450-mRNA-1 |
chr3_4 | exon | 34861293 | 34861399 | 34861293 | ID=Msa0498450-mRNA-1:exon:7363;Parent=Msa0498450-mRNA-1 |
chr3_4 | exon | 34861490 | 34861563 | 34861490 | ID=Msa0498450-mRNA-1:exon:7364;Parent=Msa0498450-mRNA-1 |
chr3_4 | exon | 34861600 | 34861696 | 34861600 | ID=Msa0498450-mRNA-1:exon:7365;Parent=Msa0498450-mRNA-1 |
chr3_4 | exon | 34861730 | 34861941 | 34861730 | ID=Msa0498450-mRNA-1:exon:7366;Parent=Msa0498450-mRNA-1 |
chr3_4 | CDS | 34853435 | 34853440 | 34853435 | ID=Msa0498450-mRNA-1:cds;Parent=Msa0498450-mRNA-1 |
chr3_4 | CDS | 34853492 | 34853497 | 34853492 | ID=Msa0498450-mRNA-1:cds;Parent=Msa0498450-mRNA-1 |
chr3_4 | CDS | 34854142 | 34854225 | 34854142 | ID=Msa0498450-mRNA-1:cds;Parent=Msa0498450-mRNA-1 |
chr3_4 | CDS | 34854346 | 34854417 | 34854346 | ID=Msa0498450-mRNA-1:cds;Parent=Msa0498450-mRNA-1 |
chr3_4 | CDS | 34854564 | 34854627 | 34854564 | ID=Msa0498450-mRNA-1:cds;Parent=Msa0498450-mRNA-1 |
chr3_4 | CDS | 34855202 | 34855275 | 34855202 | ID=Msa0498450-mRNA-1:cds;Parent=Msa0498450-mRNA-1 |
chr3_4 | CDS | 34855396 | 34855479 | 34855396 | ID=Msa0498450-mRNA-1:cds;Parent=Msa0498450-mRNA-1 |
chr3_4 | CDS | 34855594 | 34855678 | 34855594 | ID=Msa0498450-mRNA-1:cds;Parent=Msa0498450-mRNA-1 |
chr3_4 | CDS | 34856023 | 34856084 | 34856023 | ID=Msa0498450-mRNA-1:cds;Parent=Msa0498450-mRNA-1 |
chr3_4 | CDS | 34859690 | 34859811 | 34859690 | ID=Msa0498450-mRNA-1:cds;Parent=Msa0498450-mRNA-1 |
chr3_4 | CDS | 34859914 | 34859974 | 34859914 | ID=Msa0498450-mRNA-1:cds;Parent=Msa0498450-mRNA-1 |
chr3_4 | CDS | 34860068 | 34860166 | 34860068 | ID=Msa0498450-mRNA-1:cds;Parent=Msa0498450-mRNA-1 |
chr3_4 | CDS | 34861054 | 34861095 | 34861054 | ID=Msa0498450-mRNA-1:cds;Parent=Msa0498450-mRNA-1 |
chr3_4 | CDS | 34861293 | 34861399 | 34861293 | ID=Msa0498450-mRNA-1:cds;Parent=Msa0498450-mRNA-1 |
chr3_4 | CDS | 34861490 | 34861556 | 34861490 | ID=Msa0498450-mRNA-1:cds;Parent=Msa0498450-mRNA-1 |
chr3_4 | three_prime_UTR | 34861557 | 34861563 | 34861557 | ID=Msa0498450-mRNA-1:three_prime_utr;Parent=Msa0498450-mRNA-1 |
chr3_4 | three_prime_UTR | 34861600 | 34861696 | 34861600 | ID=Msa0498450-mRNA-1:three_prime_utr;Parent=Msa0498450-mRNA-1 |
chr3_4 | three_prime_UTR | 34861730 | 34861941 | 34861730 | ID=Msa0498450-mRNA-1:three_prime_utr;Parent=Msa0498450-mRNA-1 |
Gene Sequence |
Protein sequence |