AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0498450


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0498450 MtrunA17_Chr3g0095921 85.714 385 12 3 2 344 9 392 0.0 652
Msa0498450 MtrunA17_Chr8g0334701 36.212 359 181 5 3 314 35 392 2.16e-71 227
Msa0498450 MtrunA17_Chr8g0337981 37.845 362 178 5 3 318 9 369 7.73e-69 220
Msa0498450 MtrunA17_Chr1g0150221 34.530 362 186 5 2 316 41 398 1.21e-66 215
Msa0498450 MtrunA17_Chr8g0390721 29.006 362 194 10 12 312 54 413 1.60e-38 141
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0498450 AT1G06550.1 62.903 372 94 4 6 334 13 383 1.60e-167 472
Msa0498450 AT5G65940.1 37.500 360 180 4 2 317 7 365 4.49e-80 249
Msa0498450 AT5G65940.4 37.500 360 180 4 2 317 7 365 4.49e-80 249
Msa0498450 AT2G30660.1 37.921 356 160 5 2 305 3 349 1.31e-74 235
Msa0498450 AT5G65940.2 42.199 282 152 3 2 273 7 287 6.95e-73 229
Msa0498450 AT2G30650.1 37.921 356 172 5 2 311 3 355 9.33e-73 230
Msa0498450 AT5G65940.3 38.485 330 158 4 2 287 7 335 1.08e-72 229
Msa0498450 AT2G30650.2 41.549 284 151 4 2 273 3 283 6.83e-67 214
Msa0498450 AT4G31810.1 34.426 366 185 6 3 317 40 401 2.97e-65 212
Msa0498450 AT3G60510.1 36.490 359 180 5 5 316 38 395 4.39e-65 211
Msa0498450 AT2G30660.2 36.503 326 146 5 32 305 1 317 3.68e-62 202
Msa0498450 AT3G60510.3 34.115 384 180 6 5 316 38 420 1.16e-59 198
Msa0498450 AT3G60510.2 38.710 279 160 3 5 273 38 315 2.58e-55 183
Msa0498450 AT4G13360.1 32.153 367 178 14 12 313 57 417 3.48e-44 157
Msa0498450 AT3G24360.2 29.086 361 193 10 12 313 54 410 2.60e-40 147
Msa0498450 AT3G24360.1 28.219 365 195 11 12 313 54 414 7.44e-37 137
Msa0498450 AT3G24360.6 28.179 291 147 9 82 313 2 289 1.48e-26 107
Msa0498450 AT3G24360.3 28.169 284 142 9 89 313 30 310 7.05e-26 105
Msa0498450 AT3G24360.5 28.169 284 142 9 89 313 32 312 7.08e-26 105
Msa0498450 AT3G24360.4 29.119 261 162 9 12 252 54 311 2.83e-23 99.4

Find 73 sgRNAs with CRISPR-Local

Find 550 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACCTGCATTCCACACTTTC+TGG 0.177793 3_4:-34861380 None:intergenic
CTCAAGAGCAGCAGCATTAA+AGG 0.187318 3_4:+34861750 Msa0498450:three_prime_UTR
TCAGGAACTTCATATATAAA+TGG 0.257009 3_4:-34861610 None:intergenic
ATATCTGCTAGCAGAATATT+TGG 0.264767 3_4:+34854348 Msa0498450:CDS
AATATAAATTAAAATTATTC+AGG 0.271678 3_4:-34861628 None:intergenic
TGGTTAGGTCCAGCTTTAAA+AGG 0.296240 3_4:+34860098 Msa0498450:CDS
GATATTTGTGTTTCTCTGTT+TGG 0.296575 3_4:-34861527 None:intergenic
GCTGGTAGGGCTTTCTGTGC+TGG 0.297545 3_4:+34854567 Msa0498450:CDS
GCTACTCCTGAAGCAAGTTT+TGG 0.303462 3_4:+34855600 Msa0498450:CDS
AGCAGCATTAAAGGCCTCTT+TGG 0.324676 3_4:+34861759 Msa0498450:three_prime_UTR
CTTGAGTGATGTTCCCCATT+TGG 0.351838 3_4:-34861733 None:intergenic
TATTATTAAAAGAGGTTAGC+TGG 0.356765 3_4:+34861647 Msa0498450:three_prime_UTR
CGCTTGATTAGATTAAATTC+TGG 0.367422 3_4:+34859711 Msa0498450:CDS
TACTATCATTCTCGTTTGCC+AGG 0.369194 3_4:+34855648 Msa0498450:CDS
GTTACAACTGAGAATTTCAA+TGG 0.396852 3_4:-34855447 None:intergenic
GAGATAGCATTCAACTGCTT+TGG 0.402603 3_4:-34854193 None:intergenic
TGAAATCCAAAACTTGCTTC+AGG 0.406236 3_4:-34855606 None:intergenic
AGCAGATCTAATTATCTTGA+AGG 0.411003 3_4:+34854393 Msa0498450:CDS
GAGAAGAGATAGACCATGTA+AGG 0.415250 3_4:+34854152 Msa0498450:CDS
TTAATTTATATTATTAAAAG+AGG 0.416893 3_4:+34861639 Msa0498450:three_prime_UTR
GGAATTAGTTGCGGCTGGAC+TGG 0.425198 3_4:+34856039 Msa0498450:CDS
GTTTCCTCTAGTTTCCAAAT+GGG 0.430157 3_4:+34861719 Msa0498450:intron
GGGGATTTGAGAGTATTCTA+TGG 0.430649 3_4:+34854591 Msa0498450:CDS
TGTTTCCTCTAGTTTCCAAA+TGG 0.433804 3_4:+34861718 Msa0498450:intron
ATTATTAAAAGAGGTTAGCT+GGG 0.435279 3_4:+34861648 Msa0498450:three_prime_UTR
AGCTCTAATTCTTTGTCAAA+AGG 0.436167 3_4:-34861350 None:intergenic
AAAGAAGGAAATGGATGGTT+AGG 0.436849 3_4:+34860083 Msa0498450:CDS
GTAGGGCTTTCTGTGCTGGA+GGG 0.445553 3_4:+34854571 Msa0498450:CDS
GAATCAAGCAAAGAAGGAAA+TGG 0.445684 3_4:+34860074 Msa0498450:CDS
CTTACTGGAGCGCGGTTGAA+TGG 0.451435 3_4:+34856013 Msa0498450:intron
TCTTGTCCATGGAATTTCAA+TGG 0.455048 3_4:+34855401 Msa0498450:CDS
AAAATCTGTACACCACTTCA+AGG 0.458689 3_4:-34855212 None:intergenic
TTCCAGAAAGTGTGGAATGC+AGG 0.460339 3_4:+34861378 Msa0498450:CDS
TGGAGCATTGTCCTTGTCAA+TGG 0.461725 3_4:-34861070 None:intergenic
CAAAGTAGATGATGAGAAGT+TGG 0.466200 3_4:+34861313 Msa0498450:CDS
AGGGTGGACTTTACCAGGTC+AGG 0.467947 3_4:-34854217 None:intergenic
CTTGTCCATGGAATTTCAAT+GGG 0.476159 3_4:+34855402 Msa0498450:CDS
CATCAGGTTGCTCTTGTCCA+TGG 0.477425 3_4:+34855390 Msa0498450:intron
TTTGGATTTCATACTGATTG+TGG 0.478255 3_4:+34855618 Msa0498450:CDS
TCAAAGTGATTACCCTTACA+TGG 0.503994 3_4:-34854165 None:intergenic
GGAAAGGAATTAGTTGCGGC+TGG 0.504298 3_4:+34856034 Msa0498450:CDS
TAAGCTCAAAACACAAGGTA+TGG 0.509900 3_4:-34861912 None:intergenic
GAAGCTGAATCAAGCAAAGA+AGG 0.513547 3_4:+34860068 Msa0498450:CDS
CTCCACCCATTGAAATTCCA+TGG 0.515087 3_4:-34855407 None:intergenic
TATATGTGAGACTATTTGAA+AGG 0.518317 3_4:+34861807 Msa0498450:three_prime_UTR
TCTTATAGGTACTAATGTGA+TGG 0.519860 3_4:-34855245 None:intergenic
TCAATTTCAAACAGGTGGGA+TGG 0.527651 3_4:+34861476 Msa0498450:intron
TAGGGCTTTCTGTGCTGGAG+GGG 0.527824 3_4:+34854572 Msa0498450:CDS
GGTAGGGCTTTCTGTGCTGG+AGG 0.528264 3_4:+34854570 Msa0498450:CDS
TCATCTACTTTGTCAAGTGA+TGG 0.540491 3_4:-34861302 None:intergenic
ATATGTGAGACTATTTGAAA+GGG 0.551579 3_4:+34861808 Msa0498450:three_prime_UTR
TTACAACTGAGAATTTCAAT+GGG 0.551626 3_4:-34855446 None:intergenic
GTCCATGGAATTTCAATGGG+TGG 0.557121 3_4:+34855405 Msa0498450:CDS
GAATGCTATCTCACCTGACC+TGG 0.565041 3_4:+34854204 Msa0498450:CDS
AATTGATGAGTGTTTCTCAA+AGG 0.565328 3_4:+34859923 Msa0498450:CDS
TTTCCTCTAGTTTCCAAATG+GGG 0.571144 3_4:+34861720 Msa0498450:intron
ACTATCATTCTCGTTTGCCA+GGG 0.586309 3_4:+34855649 Msa0498450:CDS
ACTCATAAACTAATCCAAAG+AGG 0.592686 3_4:-34861773 None:intergenic
GCTTCAGATTCCAGAAAGTG+TGG 0.599115 3_4:+34861370 Msa0498450:CDS
ATTGAAAATAGCATTAAGAT+CGG 0.603251 3_4:+34860145 Msa0498450:CDS
GCTCAAAACACAAGGTATGG+AGG 0.609426 3_4:-34861909 None:intergenic
TGACAAGGACAATGCTCCAA+AGG 0.609649 3_4:+34861074 Msa0498450:CDS
GAATGGAAAGGAATTAGTTG+CGG 0.611054 3_4:+34856030 Msa0498450:CDS
TGGAGCGCGGTTGAATGGAA+AGG 0.616442 3_4:+34856018 Msa0498450:intron
TCTACTTTGTCAAGTGATGG+AGG 0.616670 3_4:-34861299 None:intergenic
CAAGCAAAGAAGGAAATGGA+TGG 0.625108 3_4:+34860078 Msa0498450:CDS
CATGGAATTTCAATGGGTGG+AGG 0.625143 3_4:+34855408 Msa0498450:CDS
GACCCTAAGCTCAAAACACA+AGG 0.625639 3_4:-34861917 None:intergenic
GATTTGAGAGTATTCTATGG+TGG 0.656652 3_4:+34854594 Msa0498450:CDS
AGGGGATTCATGCCTTGAAG+TGG 0.660397 3_4:+34855200 Msa0498450:intron
TAGTACCTATAAGAAAACTC+AGG 0.673028 3_4:+34855254 Msa0498450:CDS
AGAAGAGATAGACCATGTAA+GGG 0.680019 3_4:+34854153 Msa0498450:CDS
TAGAGCTCTCACCATTGACA+AGG 0.688831 3_4:+34861059 Msa0498450:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTTGTATTTATTTTTTAAA+TGG + chr3_4:34853454-34853473 Msa0498450:intron 10.0%
!! AATGAAATATTTCATAAATT+AGG + chr3_4:34855733-34855752 Msa0498450:intron 10.0%
!! ATAAAATAAAATTTAACAGT+TGG - chr3_4:34858884-34858903 None:intergenic 10.0%
!!! CTGTTAAATTTTATTTTATT+TGG + chr3_4:34858885-34858904 Msa0498450:intron 10.0%
!! AAAAAGTAAAATTTATTTGT+AGG + chr3_4:34859543-34859562 Msa0498450:intron 10.0%
!! AACAAAAAAAAAAATTAAAG+AGG + chr3_4:34859601-34859620 Msa0498450:intron 10.0%
!! TATGCTTGATAAATTAATAA+TGG + chr3_4:34854095-34854114 Msa0498450:intron 15.0%
!! TACAAAATCAAAATTCAAAA+TGG - chr3_4:34854121-34854140 None:intergenic 15.0%
!!! ATTTTGAATTTTGATTTTGT+AGG + chr3_4:34854120-34854139 Msa0498450:intron 15.0%
!! GGATTAAAAAAAATAATTCA+AGG - chr3_4:34854249-34854268 None:intergenic 15.0%
!!! TTGTACAATTGTTATTTTTA+GGG + chr3_4:34854543-34854562 Msa0498450:intron 15.0%
!! AATATATTACTATTCAAAAG+AGG - chr3_4:34855170-34855189 None:intergenic 15.0%
!! AAATATTTAATTGATACACA+TGG - chr3_4:34855881-34855900 None:intergenic 15.0%
!! AAAAATACAATATATCTTTG+AGG + chr3_4:34856289-34856308 Msa0498450:intron 15.0%
!! AATTAAATCTAACCTAATTT+AGG + chr3_4:34858968-34858987 Msa0498450:intron 15.0%
!!! TATAATTAAGATTTTTGACT+CGG + chr3_4:34859103-34859122 Msa0498450:intron 15.0%
!! TAGAAACAAAAATTATAGAA+TGG - chr3_4:34859205-34859224 None:intergenic 15.0%
!!! TTTTATATGGATTAATTGTT+TGG + chr3_4:34859570-34859589 Msa0498450:intron 15.0%
!! TGAAGAAATTATAAAAACAT+TGG + chr3_4:34859953-34859972 Msa0498450:CDS 15.0%
!! TAAATAAAATAGACTAAATC+AGG + chr3_4:34860585-34860604 Msa0498450:intron 15.0%
!!! TTCATTGTCATTTTATTTTA+AGG + chr3_4:34861032-34861051 Msa0498450:intron 15.0%
!!! TCATTGTCATTTTATTTTAA+GGG + chr3_4:34861033-34861052 Msa0498450:intron 15.0%
!!! ATAATAACATAATAAGTTGA+AGG - chr3_4:34861442-34861461 None:intergenic 15.0%
!!! TTTGAAATTGAAATGAATTT+TGG - chr3_4:34861467-34861486 None:intergenic 15.0%
!! GATGCTAATTTATAGTTTAT+TGG + chr3_4:34853728-34853747 Msa0498450:intron 20.0%
!! AATAATAATATGTGTCTGTT+TGG - chr3_4:34854066-34854085 None:intergenic 20.0%
!!! CAATTTTCAACAATTTCAAA+GGG - chr3_4:34854437-34854456 None:intergenic 20.0%
!!! TCAATTTTCAACAATTTCAA+AGG - chr3_4:34854438-34854457 None:intergenic 20.0%
!!! GTTGTACAATTGTTATTTTT+AGG + chr3_4:34854542-34854561 Msa0498450:intron 20.0%
!!! TATTTCCAACATTTTCTTAT+AGG - chr3_4:34854711-34854730 None:intergenic 20.0%
!!! CTTTTTTCTTATAATACTAC+TGG - chr3_4:34854813-34854832 None:intergenic 20.0%
!!! TATACTTTATTTCTCTCATT+AGG - chr3_4:34855125-34855144 None:intergenic 20.0%
!! TAATGAGAGAAATAAAGTAT+AGG + chr3_4:34855124-34855143 Msa0498450:intron 20.0%
!! TAATATATTTCTTCTTGACA+GGG + chr3_4:34855181-34855200 Msa0498450:intron 20.0%
!!! CAAAGCATTTTTTGAAATTT+AGG - chr3_4:34855570-34855589 None:intergenic 20.0%
!!! ATCTATTGTTTTAGAATTGA+GGG - chr3_4:34855799-34855818 None:intergenic 20.0%
!!! AATCTATTGTTTTAGAATTG+AGG - chr3_4:34855800-34855819 None:intergenic 20.0%
!! AAGGTTTAATACTTCAATTA+TGG + chr3_4:34856543-34856562 Msa0498450:intron 20.0%
!! TTTAATACTTCAATTATGGA+TGG + chr3_4:34856547-34856566 Msa0498450:intron 20.0%
!! AATTTCACTACTATATTCTA+AGG - chr3_4:34856709-34856728 None:intergenic 20.0%
!! ATACATTAGATACAATGATA+TGG + chr3_4:34857024-34857043 Msa0498450:intron 20.0%
!! TATACTCCAATATATCTTAA+GGG + chr3_4:34857102-34857121 Msa0498450:intron 20.0%
!! TCTAAATTTATTATCCATGT+CGG + chr3_4:34857478-34857497 Msa0498450:intron 20.0%
!!! TAGGATTTTTAAGTTTCTTT+CGG - chr3_4:34858067-34858086 None:intergenic 20.0%
!!! GATTATCAGAATTTTAAGAT+GGG - chr3_4:34858136-34858155 None:intergenic 20.0%
!!! TGATTATCAGAATTTTAAGA+TGG - chr3_4:34858137-34858156 None:intergenic 20.0%
!! AATATTAAATACAAAGCAAG+GGG - chr3_4:34858224-34858243 None:intergenic 20.0%
!! GAATATTAAATACAAAGCAA+GGG - chr3_4:34858225-34858244 None:intergenic 20.0%
!! AGAATATTAAATACAAAGCA+AGG - chr3_4:34858226-34858245 None:intergenic 20.0%
!! TTATTATCATTACATGGTTA+TGG - chr3_4:34858375-34858394 None:intergenic 20.0%
!! AAGACTTTATTATCATTACA+TGG - chr3_4:34858381-34858400 None:intergenic 20.0%
!! TGCTAATTATAGAAACAAAA+AGG + chr3_4:34859039-34859058 Msa0498450:intron 20.0%
!! CACATCACATAAAAAAAAAA+GGG - chr3_4:34859406-34859425 None:intergenic 20.0%
!! AAAGTGAGTTATTTAGATTA+TGG + chr3_4:34859462-34859481 Msa0498450:intron 20.0%
!!! ATTTGTAGGACATTTTTATA+TGG + chr3_4:34859557-34859576 Msa0498450:intron 20.0%
!! ATTGAAAATAGCATTAAGAT+CGG + chr3_4:34860145-34860164 Msa0498450:CDS 20.0%
!!! ATGCATAACTTGTTTAATAT+TGG + chr3_4:34860627-34860646 Msa0498450:intron 20.0%
!!! CTATAATAAATTTTGACAGA+AGG + chr3_4:34860950-34860969 Msa0498450:intron 20.0%
!! AATTCATTTCAATTTCAAAC+AGG + chr3_4:34861468-34861487 Msa0498450:intron 20.0%
!! AAGTAGAGATGAAAAATATT+TGG - chr3_4:34861582-34861601 None:intergenic 20.0%
!!! GATTATAAAAACTGTCATTT+TGG + chr3_4:34861878-34861897 Msa0498450:three_prime_UTR 20.0%
!!! ATTTTTAAGTCACCAGAAAA+TGG - chr3_4:34853578-34853597 None:intergenic 25.0%
!! TATAGCAGTTTTACATCAAA+TGG + chr3_4:34853759-34853778 Msa0498450:intron 25.0%
! TTGCAATTACAAAGACAATA+AGG - chr3_4:34853849-34853868 None:intergenic 25.0%
! AAATAATTCAAGGTTGAGTA+GGG - chr3_4:34854239-34854258 None:intergenic 25.0%
! AAAATAATTCAAGGTTGAGT+AGG - chr3_4:34854240-34854259 None:intergenic 25.0%
! TTTAATCTTTGAATCCAATC+AGG + chr3_4:34854324-34854343 Msa0498450:intron 25.0%
! TAGCAGAATATTTGGAAAAA+TGG + chr3_4:34854356-34854375 Msa0498450:CDS 25.0%
! AGCAGAATATTTGGAAAAAT+GGG + chr3_4:34854357-34854376 Msa0498450:CDS 25.0%
!! TCATTCTCTATAGGATTTTT+AGG + chr3_4:34854637-34854656 Msa0498450:intron 25.0%
!! ATTAGCCTATAAGAAAATGT+TGG + chr3_4:34854703-34854722 Msa0498450:intron 25.0%
! ATTTCTCTCATTAGGTTTAT+TGG - chr3_4:34855117-34855136 None:intergenic 25.0%
! GTAATATATTTCTTCTTGAC+AGG + chr3_4:34855180-34855199 Msa0498450:intron 25.0%
! AATATATTTCTTCTTGACAG+GGG + chr3_4:34855182-34855201 Msa0498450:intron 25.0%
!! AAAGTCTCATGTTTTCTAAA+TGG + chr3_4:34855352-34855371 Msa0498450:intron 25.0%
!! AAGTCTCATGTTTTCTAAAT+GGG + chr3_4:34855353-34855372 Msa0498450:intron 25.0%
! TTACAACTGAGAATTTCAAT+GGG - chr3_4:34855449-34855468 None:intergenic 25.0%
!!! TTATTCGTCTAAAACCTTTT+TGG + chr3_4:34855505-34855524 Msa0498450:intron 25.0%
! ATTTCAAAAAATGCTTTGAC+AGG + chr3_4:34855572-34855591 Msa0498450:intron 25.0%
! ATCTTACTCATCAATAGTTA+TGG + chr3_4:34855919-34855938 Msa0498450:intron 25.0%
! TCAATAGTTATGGAACTTTA+AGG + chr3_4:34855929-34855948 Msa0498450:intron 25.0%
!! CAATATATCTTTGAGGAATT+CGG + chr3_4:34856296-34856315 Msa0498450:intron 25.0%
! TTGTAGCATGAGAAAAAATA+GGG - chr3_4:34856666-34856685 None:intergenic 25.0%
! TTTGTAGCATGAGAAAAAAT+AGG - chr3_4:34856667-34856686 None:intergenic 25.0%
! AAAATCCTAAAAAACACAGT+GGG + chr3_4:34856853-34856872 Msa0498450:intron 25.0%
!! TCAGTGCACATTTTAAATTA+TGG + chr3_4:34856886-34856905 Msa0498450:intron 25.0%
!! CAGTGCACATTTTAAATTAT+GGG + chr3_4:34856887-34856906 Msa0498450:intron 25.0%
!!! ACATCTTTTAAGAGAATAGA+TGG + chr3_4:34856960-34856979 Msa0498450:intron 25.0%
! ATATATTGGAGTATACACTT+GGG - chr3_4:34857097-34857116 None:intergenic 25.0%
! GTATACTCCAATATATCTTA+AGG + chr3_4:34857101-34857120 Msa0498450:intron 25.0%
! TCAAATAAGTCAATTCAAAC+AGG - chr3_4:34857128-34857147 None:intergenic 25.0%
! AATTAACTGTTTATCCAAAG+AGG + chr3_4:34857326-34857345 Msa0498450:intron 25.0%
! ATTAACTGTTTATCCAAAGA+GGG + chr3_4:34857327-34857346 Msa0498450:intron 25.0%
! TTCAATGTAATTACATGTGT+CGG - chr3_4:34857447-34857466 None:intergenic 25.0%
! TAAGAATTCTATCCTAATTC+CGG - chr3_4:34857559-34857578 None:intergenic 25.0%
! AATTAGGATAGAATTCTTAC+CGG + chr3_4:34857560-34857579 Msa0498450:intron 25.0%
! TAGAAAACTAGAATTCTTAC+CGG + chr3_4:34857591-34857610 Msa0498450:intron 25.0%
!!! GATTCTTGTTTTAAACTTCA+TGG - chr3_4:34857826-34857845 None:intergenic 25.0%
! TTAAAAACCTTCAAAAGAGA+AGG + chr3_4:34857985-34858004 Msa0498450:intron 25.0%
!!! AGGATTTTTAAGTTTCTTTC+GGG - chr3_4:34858066-34858085 None:intergenic 25.0%
!!! TATTTTAACCTCTTATGAGT+TGG - chr3_4:34858254-34858273 None:intergenic 25.0%
! ATATCCCAAATTTCGAAATA+AGG + chr3_4:34858403-34858422 Msa0498450:intron 25.0%
!! TGATCCTTATTTCGAAATTT+GGG - chr3_4:34858410-34858429 None:intergenic 25.0%
!! ATGATCCTTATTTCGAAATT+TGG - chr3_4:34858411-34858430 None:intergenic 25.0%
!!! TTTGTTTCTATTATGTGATG+TGG + chr3_4:34859215-34859234 Msa0498450:intron 25.0%
! CCACATCACATAAAAAAAAA+AGG - chr3_4:34859407-34859426 None:intergenic 25.0%
!!! CCTTTTTTTTTTATGTGATG+TGG + chr3_4:34859404-34859423 Msa0498450:intron 25.0%
! TGGTAAGTTTCTTACTATTT+CGG + chr3_4:34859973-34859992 Msa0498450:intron 25.0%
! CTTAAGATTTCATATATCGT+TGG - chr3_4:34860232-34860251 None:intergenic 25.0%
! GATTATCATTTCAAAACTTC+AGG - chr3_4:34860278-34860297 None:intergenic 25.0%
!!! AAAGAAAGTAGTTTTAGAAG+AGG - chr3_4:34860300-34860319 None:intergenic 25.0%
! TAGTAGATAATCACTGTAAT+TGG - chr3_4:34860558-34860577 None:intergenic 25.0%
!!! TTCATTTTTCTGTATACTCT+TGG + chr3_4:34860683-34860702 Msa0498450:intron 25.0%
!!! CAGTATTTTTACTTATCAGT+AGG - chr3_4:34860791-34860810 None:intergenic 25.0%
! GATAAGTAAAAATACTGTCT+TGG + chr3_4:34860794-34860813 Msa0498450:intron 25.0%
! TAAATAATCTACTTGTTCAG+TGG + chr3_4:34861273-34861292 Msa0498450:intron 25.0%
! AAATAATCTACTTGTTCAGT+GGG + chr3_4:34861274-34861293 Msa0498450:intron 25.0%
! TAGAGATGAAAAATATTTGG+AGG - chr3_4:34861579-34861598 None:intergenic 25.0%
!! TATTTTTCATCTCTACTTGT+CGG + chr3_4:34861584-34861603 Msa0498450:intron 25.0%
! TCAGGAACTTCATATATAAA+TGG - chr3_4:34861613-34861632 None:intergenic 25.0%
! TATTATTAAAAGAGGTTAGC+TGG + chr3_4:34861647-34861666 Msa0498450:three_prime_UTR 25.0%
!! ATTATTAAAAGAGGTTAGCT+GGG + chr3_4:34861648-34861667 Msa0498450:three_prime_UTR 25.0%
! TATATGTGAGACTATTTGAA+AGG + chr3_4:34861807-34861826 Msa0498450:three_prime_UTR 25.0%
! ATATGTGAGACTATTTGAAA+GGG + chr3_4:34861808-34861827 Msa0498450:three_prime_UTR 25.0%
TCTTCATTTACCATATTGTG+TGG + chr3_4:34853532-34853551 Msa0498450:intron 30.0%
TTCTCAGCTTCTTAAAATCA+CGG - chr3_4:34853976-34853995 None:intergenic 30.0%
!! GATTTTAAGAAGCTGAGAAT+TGG + chr3_4:34853977-34853996 Msa0498450:intron 30.0%
ATAATATGTGTCTGTTTGGA+GGG - chr3_4:34854062-34854081 None:intergenic 30.0%
AATAATATGTGTCTGTTTGG+AGG - chr3_4:34854063-34854082 None:intergenic 30.0%
! TTGATTTTGTAGGAAGTTCT+TGG + chr3_4:34854130-34854149 Msa0498450:intron 30.0%
TTAAGACACACTAATCACTT+AGG - chr3_4:34854270-34854289 None:intergenic 30.0%
ATATCTGCTAGCAGAATATT+TGG + chr3_4:34854348-34854367 Msa0498450:CDS 30.0%
AGCAGATCTAATTATCTTGA+AGG + chr3_4:34854393-34854412 Msa0498450:CDS 30.0%
!!! AATTGTTATTTTTAGGGAGC+TGG + chr3_4:34854549-34854568 Msa0498450:intron 30.0%
GTAAAGCAATCATTCTCTAT+AGG + chr3_4:34854628-34854647 Msa0498450:intron 30.0%
TTATTGATCAATGCATGTGT+TGG + chr3_4:34854836-34854855 Msa0498450:intron 30.0%
TCTTATAGGTACTAATGTGA+TGG - chr3_4:34855248-34855267 None:intergenic 30.0%
TAGTACCTATAAGAAAACTC+AGG + chr3_4:34855254-34855273 Msa0498450:CDS 30.0%
TTCTAAATGTTCAATGACAG+TGG - chr3_4:34855304-34855323 None:intergenic 30.0%
! AGTCTCATGTTTTCTAAATG+GGG + chr3_4:34855354-34855373 Msa0498450:intron 30.0%
GTTACAACTGAGAATTTCAA+TGG - chr3_4:34855450-34855469 None:intergenic 30.0%
!!! CTAAAACCTTTTTGGTTTTG+TGG + chr3_4:34855513-34855532 Msa0498450:intron 30.0%
AATACACCACAAAACCAAAA+AGG - chr3_4:34855522-34855541 None:intergenic 30.0%
! TTTGGATTTCATACTGATTG+TGG + chr3_4:34855618-34855637 Msa0498450:CDS 30.0%
AGAAATTCTTTGTGAGATTG+TGG - chr3_4:34855686-34855705 None:intergenic 30.0%
CGAAATGCTTGAATTTACTA+GGG - chr3_4:34856207-34856226 None:intergenic 30.0%
TCGAAATGCTTGAATTTACT+AGG - chr3_4:34856208-34856227 None:intergenic 30.0%
GTATAGTTTAAACACAGTTC+GGG - chr3_4:34856373-34856392 None:intergenic 30.0%
CGTATAGTTTAAACACAGTT+CGG - chr3_4:34856374-34856393 None:intergenic 30.0%
TCTGAATGAACAAGATGAAA+AGG + chr3_4:34856524-34856543 Msa0498450:intron 30.0%
GAAGAAAAAACCAACAAACA+AGG + chr3_4:34856614-34856633 Msa0498450:intron 30.0%
! TCAGTTTAGAGAGAAGTATA+AGG - chr3_4:34856780-34856799 None:intergenic 30.0%
!!! TTTTTTAGGATTTTGCTTCG+AGG - chr3_4:34856847-34856866 None:intergenic 30.0%
CAAAATCCTAAAAAACACAG+TGG + chr3_4:34856852-34856871 Msa0498450:intron 30.0%
TATATTGGAGTATACACTTG+GGG - chr3_4:34857096-34857115 None:intergenic 30.0%
GATATATTGGAGTATACACT+TGG - chr3_4:34857098-34857117 None:intergenic 30.0%
TCAAAGGATATTATGAAGCA+TGG + chr3_4:34857368-34857387 Msa0498450:intron 30.0%
TAGGAAACTAGAATTCTTAC+CGG + chr3_4:34857537-34857556 Msa0498450:intron 30.0%
ATAGAATTCTTACCGGAATT+AGG + chr3_4:34857567-34857586 Msa0498450:intron 30.0%
!! CTAGTTTTCTATCCTAATTC+CGG - chr3_4:34857582-34857601 None:intergenic 30.0%
GATTCAAAGTTGTATCAAAG+AGG - chr3_4:34857771-34857790 None:intergenic 30.0%
TAAACTTCATGGAAAAGAGA+AGG - chr3_4:34857815-34857834 None:intergenic 30.0%
! TAAACTACCTTCTCTTTTGA+AGG - chr3_4:34857995-34858014 None:intergenic 30.0%
!!! TCGAGTTGAGATTTTATCAA+AGG - chr3_4:34858019-34858038 None:intergenic 30.0%
!!! TTTTAAGATGGGATGTAATG+AGG - chr3_4:34858125-34858144 None:intergenic 30.0%
TATGAGTTTGAAAAGCTTGT+GGG - chr3_4:34858179-34858198 None:intergenic 30.0%
ATATGAGTTTGAAAAGCTTG+TGG - chr3_4:34858180-34858199 None:intergenic 30.0%
ACTCATATAATACGCAGTTA+CGG + chr3_4:34858192-34858211 Msa0498450:intron 30.0%
TTTGTTAGAATCATCCTCAA+AGG - chr3_4:34858478-34858497 None:intergenic 30.0%
TGGAACTAACTATCTACAAT+GGG - chr3_4:34858506-34858525 None:intergenic 30.0%
ATGGAACTAACTATCTACAA+TGG - chr3_4:34858507-34858526 None:intergenic 30.0%
!! TTCCATTGAAGTGTTTTGAA+GGG + chr3_4:34858521-34858540 Msa0498450:intron 30.0%
AGGGAGATTCAAATTCAAAT+GGG + chr3_4:34858697-34858716 Msa0498450:intron 30.0%
AGATTCAAATTCAAATGGGT+TGG + chr3_4:34858701-34858720 Msa0498450:intron 30.0%
CTCATTCAAACTCCTAAATT+AGG - chr3_4:34858983-34859002 None:intergenic 30.0%
ATAAAAAAAAAAGGGCAACC+CGG - chr3_4:34859398-34859417 None:intergenic 30.0%
GTTATTTAGATTATGGCCAT+TGG + chr3_4:34859469-34859488 Msa0498450:intron 30.0%
CGCTTGATTAGATTAAATTC+TGG + chr3_4:34859711-34859730 Msa0498450:CDS 30.0%
AATTGATGAGTGTTTCTCAA+AGG + chr3_4:34859923-34859942 Msa0498450:CDS 30.0%
!!! AATGCTATTTTCAATGCAGT+AGG - chr3_4:34860140-34860159 None:intergenic 30.0%
AAATAGCATTAAGATCGGTA+AGG + chr3_4:34860150-34860169 Msa0498450:intron 30.0%
TAATCACTGTAATTGGTCAT+TGG - chr3_4:34860551-34860570 None:intergenic 30.0%
ATCAGGAAAAAGAACAGAAA+TGG + chr3_4:34860602-34860621 Msa0498450:intron 30.0%
! TGTTTAATATTGGTCTGTCT+AGG + chr3_4:34860637-34860656 Msa0498450:intron 30.0%
ACTATCTGAATGTCTAAAGA+AGG + chr3_4:34860850-34860869 Msa0498450:intron 30.0%
TATCTTCAGATATCGTAGTT+CGG - chr3_4:34860901-34860920 None:intergenic 30.0%
!! GTTTGCTTCAGATTTTAGTA+GGG - chr3_4:34861011-34861030 None:intergenic 30.0%
!! AGTTTGCTTCAGATTTTAGT+AGG - chr3_4:34861012-34861031 None:intergenic 30.0%
ATTCGTATAACCAAAAAAGG+AGG - chr3_4:34861130-34861149 None:intergenic 30.0%
GAGATTCGTATAACCAAAAA+AGG - chr3_4:34861133-34861152 None:intergenic 30.0%
! AGCTCTAATTCTTTGTCAAA+AGG - chr3_4:34861353-34861372 None:intergenic 30.0%
TCATTTCAATTTCAAACAGG+TGG + chr3_4:34861471-34861490 Msa0498450:intron 30.0%
CATTTCAATTTCAAACAGGT+GGG + chr3_4:34861472-34861491 Msa0498450:intron 30.0%
GATATTTGTGTTTCTCTGTT+TGG - chr3_4:34861530-34861549 None:intergenic 30.0%
ACTCATAAACTAATCCAAAG+AGG - chr3_4:34861776-34861795 None:intergenic 30.0%
! CTTTGAAAGTCCACACAATA+TGG - chr3_4:34853545-34853564 None:intergenic 35.0%
CATATTGTGTGGACTTTCAA+AGG + chr3_4:34853543-34853562 Msa0498450:intron 35.0%
TTAAGTCACCAGAAAATGGT+AGG - chr3_4:34853574-34853593 None:intergenic 35.0%
GGAAATAGGATGAAAGTAAG+TGG - chr3_4:34853601-34853620 None:intergenic 35.0%
! CTTAAAGAGTGTGAAGAGAA+TGG - chr3_4:34853638-34853657 None:intergenic 35.0%
CATTCTCTTCACACTCTTTA+AGG + chr3_4:34853636-34853655 Msa0498450:intron 35.0%
TGCTTACATTCCAAATGAAC+AGG + chr3_4:34853789-34853808 Msa0498450:intron 35.0%
! TCACGTTTTGCTTGAAATCA+CGG - chr3_4:34854029-34854048 None:intergenic 35.0%
AGAAGAGATAGACCATGTAA+GGG + chr3_4:34854153-34854172 Msa0498450:CDS 35.0%
TCAAAGTGATTACCCTTACA+TGG - chr3_4:34854168-34854187 None:intergenic 35.0%
!!! TTATTTTTAGGGAGCTGGTA+GGG + chr3_4:34854554-34854573 Msa0498450:intron 35.0%
!! GATTTGAGAGTATTCTATGG+TGG + chr3_4:34854594-34854613 Msa0498450:CDS 35.0%
AAATGTTGGAAATAGACTCC+CGG + chr3_4:34854717-34854736 Msa0498450:intron 35.0%
TGTTAGACACTAATACGTGT+AGG + chr3_4:34854870-34854889 Msa0498450:intron 35.0%
! CTTTAGATTAAAAGTGCGTC+CGG - chr3_4:34854899-34854918 None:intergenic 35.0%
AAGTCATCTATCTTCATCCT+CGG - chr3_4:34854969-34854988 None:intergenic 35.0%
AAACAGTATTGTCACTGTAG+TGG - chr3_4:34855073-34855092 None:intergenic 35.0%
CTCATTAGGTTTATTGGAAC+TGG - chr3_4:34855111-34855130 None:intergenic 35.0%
AAAATCTGTACACCACTTCA+AGG - chr3_4:34855215-34855234 None:intergenic 35.0%
! AAGTGGTGTACAGATTTTAC+TGG + chr3_4:34855217-34855236 Msa0498450:CDS 35.0%
! CAGAACCTGAGTTTTCTTAT+AGG - chr3_4:34855262-34855281 None:intergenic 35.0%
TCTTGTCCATGGAATTTCAA+TGG + chr3_4:34855401-34855420 Msa0498450:CDS 35.0%
CTTGTCCATGGAATTTCAAT+GGG + chr3_4:34855402-34855421 Msa0498450:CDS 35.0%
! TGAAATCCAAAACTTGCTTC+AGG - chr3_4:34855609-34855628 None:intergenic 35.0%
! TCATTTACACTTTGCTGTCA+TGG - chr3_4:34855718-34855737 None:intergenic 35.0%
CGTTTGTATCCTGGAAATAA+AGG + chr3_4:34855846-34855865 Msa0498450:intron 35.0%
! ACTAAAGCACCTTTATTTCC+AGG - chr3_4:34855858-34855877 None:intergenic 35.0%
AGAGATCATGTCATTCATGT+AGG + chr3_4:34855977-34855996 Msa0498450:intron 35.0%
CATTCATGTAGGTGAATACT+TGG + chr3_4:34855988-34856007 Msa0498450:intron 35.0%
GAATGGAAAGGAATTAGTTG+CGG + chr3_4:34856030-34856049 Msa0498450:CDS 35.0%
!! AACTCATTTTGTCACTTCTG+AGG + chr3_4:34856063-34856082 Msa0498450:CDS 35.0%
!!! ATTTTGTCACTTCTGAGGTT+TGG + chr3_4:34856068-34856087 Msa0498450:intron 35.0%
TGGTTATGTTCTACTCTATC+TGG + chr3_4:34856088-34856107 Msa0498450:intron 35.0%
ATATGTGAGCAGTGAACATT+GGG - chr3_4:34856131-34856150 None:intergenic 35.0%
AACGAAGTGGAGTTTCATAA+CGG - chr3_4:34856241-34856260 None:intergenic 35.0%
CCAGTTACAAGATCAAGTTT+GGG - chr3_4:34856347-34856366 None:intergenic 35.0%
CCAAACTTGATCTTGTAACT+GGG + chr3_4:34856345-34856364 Msa0498450:intron 35.0%
CTTGTTCATTCAGATGTATG+AGG - chr3_4:34856518-34856537 None:intergenic 35.0%
TAGGGCAAATATCAGACATA+AGG - chr3_4:34856648-34856667 None:intergenic 35.0%
! ACTACTATATTCTAAGGAGC+AGG - chr3_4:34856703-34856722 None:intergenic 35.0%
TCTTATATCTGATACTACCC+TGG + chr3_4:34856728-34856747 Msa0498450:intron 35.0%
TTGCAGAATGAGTAAAACCA+GGG - chr3_4:34856748-34856767 None:intergenic 35.0%
TTTGCAGAATGAGTAAAACC+AGG - chr3_4:34856749-34856768 None:intergenic 35.0%
!!! TTACTCCCACTGTGTTTTTT+AGG - chr3_4:34856861-34856880 None:intergenic 35.0%
ACGAGATTAGTGGAAAACAT+GGG + chr3_4:34856927-34856946 Msa0498450:intron 35.0%
GTATCTGATACCCTTCTTAT+CGG - chr3_4:34857008-34857027 None:intergenic 35.0%
ATATTGGAGTATACACTTGG+GGG - chr3_4:34857095-34857114 None:intergenic 35.0%
AACAGGCCCTTAAGATATAT+TGG - chr3_4:34857111-34857130 None:intergenic 35.0%
ATTTGAGCTTCTCAACTGTT+TGG + chr3_4:34857142-34857161 Msa0498450:intron 35.0%
TTTGAGCTTCTCAACTGTTT+GGG + chr3_4:34857143-34857162 Msa0498450:intron 35.0%
ATGCATTCCAAGATTGCTTA+CGG + chr3_4:34857223-34857242 Msa0498450:intron 35.0%
TTTGAATGCTTCTAGTGCTT+AGG - chr3_4:34857353-34857372 None:intergenic 35.0%
!! TAAGCACTAGAAGCATTCAA+AGG + chr3_4:34857352-34857371 Msa0498450:intron 35.0%
!! GTAATTACATGTGTCGGTTT+CGG - chr3_4:34857441-34857460 None:intergenic 35.0%
CTAGTTTCCTATATGAAGCA+CGG - chr3_4:34857528-34857547 None:intergenic 35.0%
CTAGAATTCTTACCGGAATT+AGG + chr3_4:34857544-34857563 Msa0498450:intron 35.0%
TCCAACTCTTCTTTACTAAG+TGG + chr3_4:34857664-34857683 Msa0498450:intron 35.0%
ACCACTTAGTAAAGAAGAGT+TGG - chr3_4:34857668-34857687 None:intergenic 35.0%
!! ATGGAAAAGAGAAGGTACTT+GGG - chr3_4:34857807-34857826 None:intergenic 35.0%
!!! AAGGTTTTTAAGATTGTCCG+CGG - chr3_4:34857976-34857995 None:intergenic 35.0%
!! ACAAGTTTGTTGAGAGATCT+AGG - chr3_4:34858086-34858105 None:intergenic 35.0%
TCTATTCTCCAACTCATAAG+AGG + chr3_4:34858243-34858262 Msa0498450:intron 35.0%
TTCCACAGCTAAAGAGATTT+GGG - chr3_4:34858311-34858330 None:intergenic 35.0%
TTTCCACAGCTAAAGAGATT+TGG - chr3_4:34858312-34858331 None:intergenic 35.0%
TGAGGATGATTCTAACAAAC+TGG + chr3_4:34858479-34858498 Msa0498450:intron 35.0%
GAGGATGATTCTAACAAACT+GGG + chr3_4:34858480-34858499 Msa0498450:intron 35.0%
!! GTTCCATTGAAGTGTTTTGA+AGG + chr3_4:34858520-34858539 Msa0498450:intron 35.0%
TTCAGTGTTTGAACAAAGAC+TGG + chr3_4:34858568-34858587 Msa0498450:intron 35.0%
!! GTTTGTTGTCTGACATGATA+TGG + chr3_4:34858590-34858609 Msa0498450:intron 35.0%
GAGGGAGATTCAAATTCAAA+TGG + chr3_4:34858696-34858715 Msa0498450:intron 35.0%
!! TTCAAATTCAAATGGGTTGG+CGG + chr3_4:34858704-34858723 Msa0498450:intron 35.0%
AATATTACTGCCGAGAAACA+CGG + chr3_4:34858730-34858749 Msa0498450:intron 35.0%
!! ATCTTCTAGTTTCAGTTTGC+AGG - chr3_4:34858764-34858783 None:intergenic 35.0%
TGCAAACTGAAACTAGAAGA+TGG + chr3_4:34858763-34858782 Msa0498450:intron 35.0%
TGAAACTAGAAGATGGTGAT+GGG + chr3_4:34858770-34858789 Msa0498450:intron 35.0%
GAGAAAACAGAACCTTAGAA+AGG - chr3_4:34859134-34859153 None:intergenic 35.0%
!!! TTCTAAGGTTCTGTTTTCTC+TGG + chr3_4:34859134-34859153 Msa0498450:intron 35.0%
CACTATCTCTAGCAAACATA+TGG - chr3_4:34859633-34859652 None:intergenic 35.0%
!! CTCAACAATTTTCTGGTACA+CGG - chr3_4:34859682-34859701 None:intergenic 35.0%
!! TCTCTAGCTCAACAATTTTC+TGG - chr3_4:34859689-34859708 None:intergenic 35.0%
!! AGTAACCTTTGGAGATTTTC+AGG + chr3_4:34859892-34859911 Msa0498450:intron 35.0%
TTGCAAAGTCGTGTTCTTTA+TGG + chr3_4:34860010-34860029 Msa0498450:intron 35.0%
TGCAAAGTCGTGTTCTTTAT+GGG + chr3_4:34860011-34860030 Msa0498450:intron 35.0%
GAATCAAGCAAAGAAGGAAA+TGG + chr3_4:34860074-34860093 Msa0498450:CDS 35.0%
AAAGAAGGAAATGGATGGTT+AGG + chr3_4:34860083-34860102 Msa0498450:CDS 35.0%
!!! CTTTTCAGTCCTTTTAAAGC+TGG - chr3_4:34860110-34860129 None:intergenic 35.0%
CAAGTCTTCAATACAGTTCT+AGG - chr3_4:34860202-34860221 None:intergenic 35.0%
!!! GCGTTGATTTAGTCTCTTTT+AGG - chr3_4:34860328-34860347 None:intergenic 35.0%
! TTAAGTAGCGTTGAACTTGT+GGG + chr3_4:34860366-34860385 Msa0498450:intron 35.0%
TATGAGACTAATCTTTGCTC+GGG - chr3_4:34860467-34860486 None:intergenic 35.0%
CTATGAGACTAATCTTTGCT+CGG - chr3_4:34860468-34860487 None:intergenic 35.0%
CATGTTTCCGTTCTTTACAT+CGG - chr3_4:34860491-34860510 None:intergenic 35.0%
ATGTAAAGAACGGAAACATG+TGG + chr3_4:34860491-34860510 Msa0498450:intron 35.0%
TTATCAGTAGGAACCGAATT+CGG - chr3_4:34860779-34860798 None:intergenic 35.0%
GATATCTGAAGATATGTACG+AGG + chr3_4:34860907-34860926 Msa0498450:intron 35.0%
ATATGTACGAGGTAAATGTC+AGG + chr3_4:34860918-34860937 Msa0498450:intron 35.0%
TATAACCAAAAAAGGAGGAG+AGG - chr3_4:34861125-34861144 None:intergenic 35.0%
TAGGCATGCATATTCAAAAG+AGG - chr3_4:34861157-34861176 None:intergenic 35.0%
TCATCTACTTTGTCAAGTGA+TGG - chr3_4:34861305-34861324 None:intergenic 35.0%
CAAAGTAGATGATGAGAAGT+TGG + chr3_4:34861313-34861332 Msa0498450:CDS 35.0%
TGTAACTTCAGCTAGTATTG+TGG + chr3_4:34861682-34861701 Msa0498450:intron 35.0%
! TGTTTCCTCTAGTTTCCAAA+TGG + chr3_4:34861718-34861737 Msa0498450:intron 35.0%
! GTTTCCTCTAGTTTCCAAAT+GGG + chr3_4:34861719-34861738 Msa0498450:intron 35.0%
! TTTCCTCTAGTTTCCAAATG+GGG + chr3_4:34861720-34861739 Msa0498450:intron 35.0%
TAAGCTCAAAACACAAGGTA+TGG - chr3_4:34861915-34861934 None:intergenic 35.0%
!! ATACCTTGTGTTTTGAGCTT+AGG + chr3_4:34861914-34861933 Msa0498450:three_prime_UTR 35.0%
!! TACCTTGTGTTTTGAGCTTA+GGG + chr3_4:34861915-34861934 Msa0498450:three_prime_UTR 35.0%
! AGGAAACACCTACCATTTTC+TGG + chr3_4:34853563-34853582 Msa0498450:intron 40.0%
TGATCACTTGCCTGTTCATT+TGG - chr3_4:34853802-34853821 None:intergenic 40.0%
GAGAAGAGATAGACCATGTA+AGG + chr3_4:34854152-34854171 Msa0498450:CDS 40.0%
GAGATAGCATTCAACTGCTT+TGG - chr3_4:34854196-34854215 None:intergenic 40.0%
TAATTCAAGGTTGAGTAGGG+TGG - chr3_4:34854236-34854255 None:intergenic 40.0%
TGCTAGCAGATATACCTGAT+TGG - chr3_4:34854341-34854360 None:intergenic 40.0%
!!! GTTATTTTTAGGGAGCTGGT+AGG + chr3_4:34854553-34854572 Msa0498450:intron 40.0%
!! GGGGATTTGAGAGTATTCTA+TGG + chr3_4:34854591-34854610 Msa0498450:CDS 40.0%
TACTACTGGTGTCTACACAT+CGG - chr3_4:34854799-34854818 None:intergenic 40.0%
GTCATTCGATCTTCATCCAA+TGG + chr3_4:34855037-34855056 Msa0498450:intron 40.0%
ACAATACTGTTTGCGACTGT+AGG + chr3_4:34855081-34855100 Msa0498450:intron 40.0%
CAATACTGTTTGCGACTGTA+GGG + chr3_4:34855082-34855101 Msa0498450:intron 40.0%
TACTATCATTCTCGTTTGCC+AGG + chr3_4:34855648-34855667 Msa0498450:CDS 40.0%
ACTATCATTCTCGTTTGCCA+GGG + chr3_4:34855649-34855668 Msa0498450:CDS 40.0%
TTGTGGTTACCTAAAAACCC+TGG - chr3_4:34855669-34855688 None:intergenic 40.0%
!! CTATCTGGTTTCCCTCATTT+TGG + chr3_4:34856103-34856122 Msa0498450:intron 40.0%
AACATTGGGAGCCAAAATGA+GGG - chr3_4:34856117-34856136 None:intergenic 40.0%
CATATGTGAGCAGTGAACAT+TGG - chr3_4:34856132-34856151 None:intergenic 40.0%
GCTTTACTCTTTGCAGTGTT+CGG - chr3_4:34856185-34856204 None:intergenic 40.0%
ATGAAACTCCACTTCGTTGA+AGG + chr3_4:34856243-34856262 Msa0498450:intron 40.0%
TGAAACTCCACTTCGTTGAA+GGG + chr3_4:34856244-34856263 Msa0498450:intron 40.0%
CCCAAACTTGATCTTGTAAC+TGG + chr3_4:34856344-34856363 Msa0498450:intron 40.0%
CCCAGTTACAAGATCAAGTT+TGG - chr3_4:34856348-34856367 None:intergenic 40.0%
AAATGTTGATGTGACTCGAG+TGG + chr3_4:34856433-34856452 Msa0498450:intron 40.0%
ACAGATAGACACGAGATTAG+TGG + chr3_4:34856917-34856936 Msa0498450:intron 40.0%
CACGAGATTAGTGGAAAACA+TGG + chr3_4:34856926-34856945 Msa0498450:intron 40.0%
TGCTTCCATATCCGATAAGA+AGG + chr3_4:34856994-34857013 Msa0498450:intron 40.0%
GCTTCCATATCCGATAAGAA+GGG + chr3_4:34856995-34857014 Msa0498450:intron 40.0%
GATACCCTTCTTATCGGATA+TGG - chr3_4:34857002-34857021 None:intergenic 40.0%
TTGAGCTTCTCAACTGTTTG+GGG + chr3_4:34857144-34857163 Msa0498450:intron 40.0%
TCCAAGATTGCTTACGGAAA+CGG + chr3_4:34857229-34857248 Msa0498450:intron 40.0%
TTACCGGAATAACTGCTAGA+TGG + chr3_4:34857607-34857626 Msa0498450:intron 40.0%
AAGCCATCTAGCAGTTATTC+CGG - chr3_4:34857613-34857632 None:intergenic 40.0%
GAAAATTCCCCTTTACCTTG+TGG + chr3_4:34857691-34857710 Msa0498450:intron 40.0%
!! TGGTTTTGCCACAAGGTAAA+GGG - chr3_4:34857702-34857721 None:intergenic 40.0%
!! ATGGTTTTGCCACAAGGTAA+AGG - chr3_4:34857703-34857722 None:intergenic 40.0%
TCGAATAGTAAAGGACTCAG+AGG - chr3_4:34857740-34857759 None:intergenic 40.0%
! GCGTACTGATCGAATAGTAA+AGG - chr3_4:34857749-34857768 None:intergenic 40.0%
!! CATGGAAAAGAGAAGGTACT+TGG - chr3_4:34857808-34857827 None:intergenic 40.0%
AAACAATTGTGACCACTCTC+CGG + chr3_4:34858337-34858356 Msa0498450:intron 40.0%
GTTATGGAATTCCATGACTC+CGG - chr3_4:34858359-34858378 None:intergenic 40.0%
!!! TTGGTGGGTTTTCTTCAATG+TGG + chr3_4:34858437-34858456 Msa0498450:intron 40.0%
TCAGTTTGTCACAACCTTTG+AGG + chr3_4:34858461-34858480 Msa0498450:intron 40.0%
GACCCTTCAAAACACTTCAA+TGG - chr3_4:34858526-34858545 None:intergenic 40.0%
TGTTGTCTGACATGATATGG+AGG + chr3_4:34858593-34858612 Msa0498450:intron 40.0%
TGATTTACACTTTCCGAGGA+TGG + chr3_4:34858627-34858646 Msa0498450:intron 40.0%
GATTTACACTTTCCGAGGAT+GGG + chr3_4:34858628-34858647 Msa0498450:intron 40.0%
TGGTGCAAGTTCTGTTAGAT+GGG + chr3_4:34858662-34858681 Msa0498450:intron 40.0%
!! TCAAATTCAAATGGGTTGGC+GGG + chr3_4:34858705-34858724 Msa0498450:intron 40.0%
CTGAAACTAGAAGATGGTGA+TGG + chr3_4:34858769-34858788 Msa0498450:intron 40.0%
TCTATTATGTGATGTGGCCT+TGG + chr3_4:34859221-34859240 Msa0498450:intron 40.0%
GTTGTTGTCATGTGACTGAA+AGG + chr3_4:34859257-34859276 Msa0498450:intron 40.0%
AACAGCCTCTTGTGTAAAAC+AGG + chr3_4:34859300-34859319 Msa0498450:intron 40.0%
ACAGCCTCTTGTGTAAAACA+GGG + chr3_4:34859301-34859320 Msa0498450:intron 40.0%
! CTTACCCTGTTTTACACAAG+AGG - chr3_4:34859308-34859327 None:intergenic 40.0%
CTCTTGTGTAAAACAGGGTA+AGG + chr3_4:34859306-34859325 Msa0498450:intron 40.0%
CGTACAATACACCAAATGGT+GGG + chr3_4:34859332-34859351 Msa0498450:intron 40.0%
! TTTTATGTGATGTGGCGCAA+CGG + chr3_4:34859412-34859431 Msa0498450:intron 40.0%
AGTGCTCATCTCTCATTTAG+TGG - chr3_4:34859441-34859460 None:intergenic 40.0%
CGTAGTACAGTGCAATTTGA+CGG - chr3_4:34859870-34859889 None:intergenic 40.0%
TGTACTACGACAGTAACCTT+TGG + chr3_4:34859881-34859900 Msa0498450:intron 40.0%
GACTTCCTGAAAATCTCCAA+AGG - chr3_4:34859900-34859919 None:intergenic 40.0%
ACTGTTCGCTTCTCATGTAA+AGG + chr3_4:34860046-34860065 Msa0498450:intron 40.0%
GAAGCTGAATCAAGCAAAGA+AGG + chr3_4:34860068-34860087 Msa0498450:CDS 40.0%
CAAGCAAAGAAGGAAATGGA+TGG + chr3_4:34860078-34860097 Msa0498450:CDS 40.0%
!! TGGTTAGGTCCAGCTTTAAA+AGG + chr3_4:34860098-34860117 Msa0498450:CDS 40.0%
! GTTAAGTAGCGTTGAACTTG+TGG + chr3_4:34860365-34860384 Msa0498450:intron 40.0%
! TAAGTAGCGTTGAACTTGTG+GGG + chr3_4:34860367-34860386 Msa0498450:intron 40.0%
CTCATAGCCGATGTAAAGAA+CGG + chr3_4:34860481-34860500 Msa0498450:intron 40.0%
GGTCGTTTGGATATACTCTA+TGG + chr3_4:34860512-34860531 Msa0498450:intron 40.0%
! AAGTCCGATAGTACCGAATT+CGG + chr3_4:34860763-34860782 Msa0498450:intron 40.0%
TCTACTTTGTCAAGTGATGG+AGG - chr3_4:34861302-34861321 None:intergenic 40.0%
TCAATTTCAAACAGGTGGGA+TGG + chr3_4:34861476-34861495 Msa0498450:intron 40.0%
! AGCAATGTGGTGGAGGAAAT+AGG - chr3_4:34853615-34853634 None:intergenic 45.0%
AAGAGAATGGAGCAATGTGG+TGG - chr3_4:34853625-34853644 None:intergenic 45.0%
GTGAAGAGAATGGAGCAATG+TGG - chr3_4:34853628-34853647 None:intergenic 45.0%
ATATGTGTCTGTTTGGAGGG+CGG - chr3_4:34854059-34854078 None:intergenic 45.0%
TCGTGCTTCATAAGCTTTGC+CGG - chr3_4:34854739-34854758 None:intergenic 45.0%
!! ATCGGTGTCAGAATCATGTC+CGG - chr3_4:34854781-34854800 None:intergenic 45.0%
CACTAATACGTGTAGGACAC+CGG + chr3_4:34854877-34854896 Msa0498450:intron 45.0%
TCGCTGCTACATTGTCATTG+AGG + chr3_4:34854921-34854940 Msa0498450:intron 45.0%
CAGTATTGTCACTGTAGTGG+TGG - chr3_4:34855070-34855089 None:intergenic 45.0%
!! GGGTGCTGTTATGTTACATC+AGG + chr3_4:34855374-34855393 Msa0498450:intron 45.0%
GTCCATGGAATTTCAATGGG+TGG + chr3_4:34855405-34855424 Msa0498450:CDS 45.0%
CTCCACCCATTGAAATTCCA+TGG - chr3_4:34855410-34855429 None:intergenic 45.0%
CATGGAATTTCAATGGGTGG+AGG + chr3_4:34855408-34855427 Msa0498450:CDS 45.0%
! GCTACTCCTGAAGCAAGTTT+TGG + chr3_4:34855600-34855619 Msa0498450:CDS 45.0%
! TCTCGTTTGCCAGGGTTTTT+AGG + chr3_4:34855657-34855676 Msa0498450:CDS 45.0%
CTTCGTGATCGTTTGTATCC+TGG + chr3_4:34855837-34855856 Msa0498450:intron 45.0%
GAACATTGGGAGCCAAAATG+AGG - chr3_4:34856118-34856137 None:intergenic 45.0%
CGTATTACTGGAGGGGAATT+GGG - chr3_4:34856157-34856176 None:intergenic 45.0%
ACGTATTACTGGAGGGGAAT+TGG - chr3_4:34856158-34856177 None:intergenic 45.0%
ATTCCCCTCCAGTAATACGT+AGG + chr3_4:34856158-34856177 Msa0498450:intron 45.0%
TGTTCGGTCCTACGTATTAC+TGG - chr3_4:34856169-34856188 None:intergenic 45.0%
!! GATTGGATGGGCTAAGAAGA+AGG - chr3_4:34856819-34856838 None:intergenic 45.0%
TTCGAGGATGACGATTGGAT+GGG - chr3_4:34856831-34856850 None:intergenic 45.0%
TTTGCTTCGAGGATGACGAT+TGG - chr3_4:34856836-34856855 None:intergenic 45.0%
TGAGCTTCTCAACTGTTTGG+GGG + chr3_4:34857145-34857164 Msa0498450:intron 45.0%
TATGAAGCATGGACACTCCT+CGG + chr3_4:34857379-34857398 Msa0498450:intron 45.0%
AGAAGAGTTGGAACGTCTAC+AGG - chr3_4:34857656-34857675 None:intergenic 45.0%
! GGTTTTGCCACAAGGTAAAG+GGG - chr3_4:34857701-34857720 None:intergenic 45.0%
AGAGGTTGTGAAAGATGGCA+TGG - chr3_4:34857722-34857741 None:intergenic 45.0%
GACTCAGAGGTTGTGAAAGA+TGG - chr3_4:34857727-34857746 None:intergenic 45.0%
!! GAAAAGAGAAGGTACTTGGG+CGG - chr3_4:34857804-34857823 None:intergenic 45.0%
! GAAAGTCTAGCTCGTGTCTT+GGG - chr3_4:34857949-34857968 None:intergenic 45.0%
! AGAAAGTCTAGCTCGTGTCT+TGG - chr3_4:34857950-34857969 None:intergenic 45.0%
CTCCCAAATCTCTTTAGCTG+TGG + chr3_4:34858306-34858325 Msa0498450:intron 45.0%
TTGAAGGGTCCAACTCTAGT+AGG + chr3_4:34858536-34858555 Msa0498450:intron 45.0%
TCACACTGACCTACTAGAGT+TGG - chr3_4:34858548-34858567 None:intergenic 45.0%
AGCGTGATTTACACTTTCCG+AGG + chr3_4:34858623-34858642 Msa0498450:intron 45.0%
GTGGTGCAAGTTCTGTTAGA+TGG + chr3_4:34858661-34858680 Msa0498450:intron 45.0%
CTGTTTATAATCGCCGCAGA+AGG + chr3_4:34858807-34858826 Msa0498450:intron 45.0%
TTTATAATCGCCGCAGAAGG+TGG + chr3_4:34858810-34858829 Msa0498450:intron 45.0%
TCTTCTGCATCAGAAAACCC+TGG - chr3_4:34858836-34858855 None:intergenic 45.0%
GACTCGGCTATACCTTTCTA+AGG + chr3_4:34859119-34859138 Msa0498450:intron 45.0%
GTCATGTGACTGAAAGGTCA+CGG + chr3_4:34859263-34859282 Msa0498450:intron 45.0%
TCATGTGACTGAAAGGTCAC+GGG + chr3_4:34859264-34859283 Msa0498450:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - chr3_4:34859297-34859316 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG + chr3_4:34859328-34859347 Msa0498450:intron 45.0%
GCGTACAATACACCAAATGG+TGG + chr3_4:34859331-34859350 Msa0498450:intron 45.0%
TGGCCATTGGAAATGCTCTA+AGG + chr3_4:34859482-34859501 Msa0498450:intron 45.0%
GGCCATTGGAAATGCTCTAA+GGG + chr3_4:34859483-34859502 Msa0498450:intron 45.0%
! CACCCTTAGAGCATTTCCAA+TGG - chr3_4:34859488-34859507 None:intergenic 45.0%
!! AACGCAAAGTGTTGCTCAGT+TGG + chr3_4:34860343-34860362 Msa0498450:intron 45.0%
TAGCTGCCGAATACACTGTT+TGG + chr3_4:34860406-34860425 Msa0498450:intron 45.0%
AGCTGCCGAATACACTGTTT+GGG + chr3_4:34860407-34860426 Msa0498450:intron 45.0%
AACGGAAACATGTGGTCGTT+TGG + chr3_4:34860499-34860518 Msa0498450:intron 45.0%
TATACTCTTGGATACCACCG+AGG + chr3_4:34860695-34860714 Msa0498450:intron 45.0%
GGAACCGAATTCGGTACTAT+CGG - chr3_4:34860770-34860789 None:intergenic 45.0%
GGATATGTGCAGATTCGTGA+AGG + chr3_4:34860815-34860834 Msa0498450:intron 45.0%
ATGTGCAGATTCGTGAAGGA+AGG + chr3_4:34860819-34860838 Msa0498450:intron 45.0%
TAGAGCTCTCACCATTGACA+AGG + chr3_4:34861059-34861078 Msa0498450:CDS 45.0%
!! TGGAGCATTGTCCTTGTCAA+TGG - chr3_4:34861073-34861092 None:intergenic 45.0%
TGACAAGGACAATGCTCCAA+AGG + chr3_4:34861074-34861093 Msa0498450:CDS 45.0%
AATGAGCGAGAGACTACCTT+TGG - chr3_4:34861093-34861112 None:intergenic 45.0%
!!! GTGAACCTCTCCTCCTTTTT+TGG + chr3_4:34861117-34861136 Msa0498450:intron 45.0%
GCTTCAGATTCCAGAAAGTG+TGG + chr3_4:34861370-34861389 Msa0498450:CDS 45.0%
! TTCCAGAAAGTGTGGAATGC+AGG + chr3_4:34861378-34861397 Msa0498450:CDS 45.0%
AACCTGCATTCCACACTTTC+TGG - chr3_4:34861383-34861402 None:intergenic 45.0%
! AGAAAGTGTGGAATGCAGGT+TGG + chr3_4:34861382-34861401 Msa0498450:intron 45.0%
GTTCCCCATTTGGAAACTAG+AGG - chr3_4:34861726-34861745 None:intergenic 45.0%
CTTGAGTGATGTTCCCCATT+TGG - chr3_4:34861736-34861755 None:intergenic 45.0%
CTCAAGAGCAGCAGCATTAA+AGG + chr3_4:34861750-34861769 Msa0498450:three_prime_UTR 45.0%
AGCAGCATTAAAGGCCTCTT+TGG + chr3_4:34861759-34861778 Msa0498450:three_prime_UTR 45.0%
GCTCAAAACACAAGGTATGG+AGG - chr3_4:34861912-34861931 None:intergenic 45.0%
GACCCTAAGCTCAAAACACA+AGG - chr3_4:34861920-34861939 None:intergenic 45.0%
!! AAAATATATAATAACTAATA+GGG - chr3_4:34854466-34854485 None:intergenic 5.0%
!! TAAAATATATAATAACTAAT+AGG - chr3_4:34854467-34854486 None:intergenic 5.0%
!!! ATTATTTTTTATTTTTGAAA+TGG + chr3_4:34859074-34859093 Msa0498450:intron 5.0%
!!! TTATTTTTTATTTTTGAAAT+GGG + chr3_4:34859075-34859094 Msa0498450:intron 5.0%
!! AATATAAATTAAAATTATTC+AGG - chr3_4:34861631-34861650 None:intergenic 5.0%
!! TTAATTTATATTATTAAAAG+AGG + chr3_4:34861639-34861658 Msa0498450:three_prime_UTR 5.0%
AGAATGGAGCAATGTGGTGG+AGG - chr3_4:34853622-34853641 None:intergenic 50.0%
GAATGCTATCTCACCTGACC+TGG + chr3_4:34854204-34854223 Msa0498450:CDS 50.0%
! TGAGTAGGGTGGACTTTACC+AGG - chr3_4:34854225-34854244 None:intergenic 50.0%
CGTGCTTCATAAGCTTTGCC+GGG - chr3_4:34854738-34854757 None:intergenic 50.0%
CACAGACACAAACACCACAC+CGG + chr3_4:34854759-34854778 Msa0498450:intron 50.0%
TGTCAGAATCATGTCCGGTG+TGG - chr3_4:34854776-34854795 None:intergenic 50.0%
!! GTCACTGTAGTGGTGGATGT+CGG - chr3_4:34855063-34855082 None:intergenic 50.0%
TACTGTTTGCGACTGTAGGG+AGG + chr3_4:34855085-34855104 Msa0498450:intron 50.0%
AGGGGATTCATGCCTTGAAG+TGG + chr3_4:34855200-34855219 Msa0498450:intron 50.0%
! CATCAGGTTGCTCTTGTCCA+TGG + chr3_4:34855390-34855409 Msa0498450:intron 50.0%
GGTGAATACTTGGCGCTTAC+TGG + chr3_4:34855998-34856017 Msa0498450:intron 50.0%
GGAAAGGAATTAGTTGCGGC+TGG + chr3_4:34856034-34856053 Msa0498450:CDS 50.0%
GGTCCTACGTATTACTGGAG+GGG - chr3_4:34856164-34856183 None:intergenic 50.0%
CGGTCCTACGTATTACTGGA+GGG - chr3_4:34856165-34856184 None:intergenic 50.0%
TCGGTCCTACGTATTACTGG+AGG - chr3_4:34856166-34856185 None:intergenic 50.0%
! GGCTCTGCAACCTTGTTTGT+TGG - chr3_4:34856627-34856646 None:intergenic 50.0%
CTTCGAGGATGACGATTGGA+TGG - chr3_4:34856832-34856851 None:intergenic 50.0%
GCCGTTTCCGTAAGCAATCT+TGG - chr3_4:34857233-34857252 None:intergenic 50.0%
TCTAGTGCTTAGGCCCTCTT+TGG - chr3_4:34857343-34857362 None:intergenic 50.0%
!! TCCTCGGATTAAGAGTGTCC+CGG + chr3_4:34857395-34857414 Msa0498450:intron 50.0%
CCTATATGAAGCACGGACAC+CGG - chr3_4:34857521-34857540 None:intergenic 50.0%
GGAACGTCTACAGGCTCTTA+TGG - chr3_4:34857647-34857666 None:intergenic 50.0%
!! GATGGCATGGTTTTGCCACA+AGG - chr3_4:34857709-34857728 None:intergenic 50.0%
GATCGTTGGGTGGTCATTGT+AGG - chr3_4:34857867-34857886 None:intergenic 50.0%
TGACCACCCAACGATCTTCA+CGG + chr3_4:34857871-34857890 Msa0498450:intron 50.0%
AAGCCTCCGTGAAGATCGTT+GGG - chr3_4:34857880-34857899 None:intergenic 50.0%
AAAGCCTCCGTGAAGATCGT+TGG - chr3_4:34857881-34857900 None:intergenic 50.0%
GAGCTAGACTTTCTTCACCG+CGG + chr3_4:34857956-34857975 Msa0498450:intron 50.0%
! GAAAAGCTTGTGGGCTGAGT+TGG - chr3_4:34858170-34858189 None:intergenic 50.0%
AATTCCATGACTCCGGAGAG+TGG - chr3_4:34858352-34858371 None:intergenic 50.0%
ACACAACTCTCTCCCATCCT+CGG - chr3_4:34858643-34858662 None:intergenic 50.0%
TGTTAGATGGGCCTGATCAG+TGG + chr3_4:34858674-34858693 Msa0498450:intron 50.0%
TGAATCTCCCTCCACTGATC+AGG - chr3_4:34858688-34858707 None:intergenic 50.0%
!! CTAGAAGATGGTGATGGGCA+TGG + chr3_4:34858775-34858794 Msa0498450:intron 50.0%
CAACTTTACCAGTTGCGCCA+AGG - chr3_4:34859241-34859260 None:intergenic 50.0%
! TAGCGTTGAACTTGTGGGGA+TGG + chr3_4:34860371-34860390 Msa0498450:intron 50.0%
TGCCGAATACACTGTTTGGG+AGG + chr3_4:34860410-34860429 Msa0498450:intron 50.0%
GCCGAATACACTGTTTGGGA+GGG + chr3_4:34860411-34860430 Msa0498450:intron 50.0%
CCCCTCCCAAACAGTGTATT+CGG - chr3_4:34860415-34860434 None:intergenic 50.0%
CCGAATACACTGTTTGGGAG+GGG + chr3_4:34860412-34860431 Msa0498450:intron 50.0%
CGAATACACTGTTTGGGAGG+GGG + chr3_4:34860413-34860432 Msa0498450:intron 50.0%
GAATACACTGTTTGGGAGGG+GGG + chr3_4:34860414-34860433 Msa0498450:intron 50.0%
CTAACACGCACACGCATCAT+AGG - chr3_4:34861176-34861195 None:intergenic 50.0%
CTATGATGCGTGTGCGTGTT+AGG + chr3_4:34861174-34861193 Msa0498450:intron 50.0%
! AGGGTGGACTTTACCAGGTC+AGG - chr3_4:34854220-34854239 None:intergenic 55.0%
GTAGGGCTTTCTGTGCTGGA+GGG + chr3_4:34854571-34854590 Msa0498450:CDS 55.0%
TAGGGCTTTCTGTGCTGGAG+GGG + chr3_4:34854572-34854591 Msa0498450:CDS 55.0%
AGCAGTCACGATTTCGACCG+AGG + chr3_4:34854949-34854968 Msa0498450:intron 55.0%
!! TAGTGGTGGATGTCGGCCAT+TGG - chr3_4:34855056-34855075 None:intergenic 55.0%
CTTACTGGAGCGCGGTTGAA+TGG + chr3_4:34856013-34856032 Msa0498450:intron 55.0%
TGGAGCGCGGTTGAATGGAA+AGG + chr3_4:34856018-34856037 Msa0498450:intron 55.0%
GGAATTAGTTGCGGCTGGAC+TGG + chr3_4:34856039-34856058 Msa0498450:CDS 55.0%
GTCGACACCCTTCAACGAAG+TGG - chr3_4:34856254-34856273 None:intergenic 55.0%
!! TCGTTGAAGGGTGTCGACAC+AGG + chr3_4:34856256-34856275 Msa0498450:intron 55.0%
ACCGGGACACTCTTAATCCG+AGG - chr3_4:34857399-34857418 None:intergenic 55.0%
CCGGTGTCCGTGCTTCATAT+AGG + chr3_4:34857518-34857537 Msa0498450:intron 55.0%
GAGGATGGGAGAGAGTTGTG+TGG + chr3_4:34858642-34858661 Msa0498450:intron 55.0%
TAGATGGGCCTGATCAGTGG+AGG + chr3_4:34858677-34858696 Msa0498450:intron 55.0%
AGATGGGCCTGATCAGTGGA+GGG + chr3_4:34858678-34858697 Msa0498450:intron 55.0%
TTACTGCCGAGAAACACGGC+AGG + chr3_4:34858734-34858753 Msa0498450:intron 55.0%
GGCTATCCTGCCGTGTTTCT+CGG - chr3_4:34858743-34858762 None:intergenic 55.0%
!! GGTGATGGGCATGGTTTGCA+AGG + chr3_4:34858784-34858803 Msa0498450:intron 55.0%
AAAACCCTGGCCACCTTCTG+CGG - chr3_4:34858823-34858842 None:intergenic 55.0%
AAGGTCACGGGTTCAAGTCC+TGG + chr3_4:34859276-34859295 Msa0498450:intron 55.0%
CTAGAGCTCCCGCATATGCA+GGG - chr3_4:34859371-34859390 None:intergenic 55.0%
ACTAGAGCTCCCGCATATGC+AGG - chr3_4:34859372-34859391 None:intergenic 55.0%
CAACCACTTGCGCTAGACCT+CGG - chr3_4:34860715-34860734 None:intergenic 55.0%
GCTGGTAGGGCTTTCTGTGC+TGG + chr3_4:34854567-34854586 Msa0498450:CDS 60.0%
GGTAGGGCTTTCTGTGCTGG+AGG + chr3_4:34854570-34854589 Msa0498450:CDS 60.0%
ACTTGGCGCTTACTGGAGCG+CGG + chr3_4:34856005-34856024 Msa0498450:intron 60.0%
CAGACACTGACACGCCGACA+TGG - chr3_4:34857495-34857514 None:intergenic 60.0%
GGCGTGTCAGTGTCTGTGTC+CGG + chr3_4:34857499-34857518 Msa0498450:intron 60.0%
! AAGGTACTTGGGCGGCGCAA+TGG - chr3_4:34857796-34857815 None:intergenic 60.0%
CCTCCGTGAAGATCGTTGGG+TGG - chr3_4:34857877-34857896 None:intergenic 60.0%
CCACCCAACGATCTTCACGG+AGG + chr3_4:34857874-34857893 Msa0498450:intron 60.0%
GTGACCACTCTCCGGAGTCA+TGG + chr3_4:34858345-34858364 Msa0498450:intron 60.0%
! TGATGTGGCCTTGGCGCAAC+TGG + chr3_4:34859230-34859249 Msa0498450:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr3_4:34859344-34859363 Msa0498450:intron 60.0%
CATATGCAGGGTCCGGGAAG+GGG - chr3_4:34859359-34859378 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG - chr3_4:34859360-34859379 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG + chr3_4:34859359-34859378 Msa0498450:intron 60.0%
TTCCCGGACCCTGCATATGC+GGG + chr3_4:34859360-34859379 Msa0498450:intron 60.0%
! ATGCGGGAGCTCTAGTGCAC+CGG + chr3_4:34859376-34859395 Msa0498450:intron 60.0%
! TCCCGGTGTCAGACACGCGT+CGG + chr3_4:34857412-34857431 Msa0498450:intron 65.0%
ACCGACGCGTGTCTGACACC+GGG - chr3_4:34857416-34857435 None:intergenic 65.0%
CACCGACGCGTGTCTGACAC+CGG - chr3_4:34857417-34857436 None:intergenic 65.0%
GTACTTGGGCGGCGCAATGG+AGG - chr3_4:34857793-34857812 None:intergenic 65.0%
AATCGCCGCAGAAGGTGGCC+AGG + chr3_4:34858815-34858834 Msa0498450:intron 65.0%
ATCGCCGCAGAAGGTGGCCA+GGG + chr3_4:34858816-34858835 Msa0498450:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr3_4:34859346-34859365 None:intergenic 65.0%
CGCATATGCAGGGTCCGGGA+AGG - chr3_4:34859361-34859380 None:intergenic 65.0%
CTCCCGCATATGCAGGGTCC+GGG - chr3_4:34859365-34859384 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG - chr3_4:34859366-34859385 None:intergenic 65.0%
! TGCGGGAGCTCTAGTGCACC+GGG + chr3_4:34859377-34859396 Msa0498450:intron 65.0%
CCACTTGCGCTAGACCTCGG+TGG - chr3_4:34860712-34860731 None:intergenic 65.0%
CCACCGAGGTCTAGCGCAAG+TGG + chr3_4:34860709-34860728 Msa0498450:intron 65.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 34853435 34861941 34853435 ID=Msa0498450;Name=Msa0498450
chr3_4 mRNA 34853435 34861941 34853435 ID=Msa0498450-mRNA-1;Parent=Msa0498450;Name=Msa0498450-mRNA-1;_AED=0.27;_eAED=0.27;_QI=0|0.68|0.76|0.88|0.56|0.58|17|316|344
chr3_4 exon 34853435 34853440 34853435 ID=Msa0498450-mRNA-1:exon:7350;Parent=Msa0498450-mRNA-1
chr3_4 exon 34853492 34853497 34853492 ID=Msa0498450-mRNA-1:exon:7351;Parent=Msa0498450-mRNA-1
chr3_4 exon 34854142 34854225 34854142 ID=Msa0498450-mRNA-1:exon:7352;Parent=Msa0498450-mRNA-1
chr3_4 exon 34854346 34854417 34854346 ID=Msa0498450-mRNA-1:exon:7353;Parent=Msa0498450-mRNA-1
chr3_4 exon 34854564 34854627 34854564 ID=Msa0498450-mRNA-1:exon:7354;Parent=Msa0498450-mRNA-1
chr3_4 exon 34855202 34855275 34855202 ID=Msa0498450-mRNA-1:exon:7355;Parent=Msa0498450-mRNA-1
chr3_4 exon 34855396 34855479 34855396 ID=Msa0498450-mRNA-1:exon:7356;Parent=Msa0498450-mRNA-1
chr3_4 exon 34855594 34855678 34855594 ID=Msa0498450-mRNA-1:exon:7357;Parent=Msa0498450-mRNA-1
chr3_4 exon 34856023 34856084 34856023 ID=Msa0498450-mRNA-1:exon:7358;Parent=Msa0498450-mRNA-1
chr3_4 exon 34859690 34859811 34859690 ID=Msa0498450-mRNA-1:exon:7359;Parent=Msa0498450-mRNA-1
chr3_4 exon 34859914 34859974 34859914 ID=Msa0498450-mRNA-1:exon:7360;Parent=Msa0498450-mRNA-1
chr3_4 exon 34860068 34860166 34860068 ID=Msa0498450-mRNA-1:exon:7361;Parent=Msa0498450-mRNA-1
chr3_4 exon 34861054 34861095 34861054 ID=Msa0498450-mRNA-1:exon:7362;Parent=Msa0498450-mRNA-1
chr3_4 exon 34861293 34861399 34861293 ID=Msa0498450-mRNA-1:exon:7363;Parent=Msa0498450-mRNA-1
chr3_4 exon 34861490 34861563 34861490 ID=Msa0498450-mRNA-1:exon:7364;Parent=Msa0498450-mRNA-1
chr3_4 exon 34861600 34861696 34861600 ID=Msa0498450-mRNA-1:exon:7365;Parent=Msa0498450-mRNA-1
chr3_4 exon 34861730 34861941 34861730 ID=Msa0498450-mRNA-1:exon:7366;Parent=Msa0498450-mRNA-1
chr3_4 CDS 34853435 34853440 34853435 ID=Msa0498450-mRNA-1:cds;Parent=Msa0498450-mRNA-1
chr3_4 CDS 34853492 34853497 34853492 ID=Msa0498450-mRNA-1:cds;Parent=Msa0498450-mRNA-1
chr3_4 CDS 34854142 34854225 34854142 ID=Msa0498450-mRNA-1:cds;Parent=Msa0498450-mRNA-1
chr3_4 CDS 34854346 34854417 34854346 ID=Msa0498450-mRNA-1:cds;Parent=Msa0498450-mRNA-1
chr3_4 CDS 34854564 34854627 34854564 ID=Msa0498450-mRNA-1:cds;Parent=Msa0498450-mRNA-1
chr3_4 CDS 34855202 34855275 34855202 ID=Msa0498450-mRNA-1:cds;Parent=Msa0498450-mRNA-1
chr3_4 CDS 34855396 34855479 34855396 ID=Msa0498450-mRNA-1:cds;Parent=Msa0498450-mRNA-1
chr3_4 CDS 34855594 34855678 34855594 ID=Msa0498450-mRNA-1:cds;Parent=Msa0498450-mRNA-1
chr3_4 CDS 34856023 34856084 34856023 ID=Msa0498450-mRNA-1:cds;Parent=Msa0498450-mRNA-1
chr3_4 CDS 34859690 34859811 34859690 ID=Msa0498450-mRNA-1:cds;Parent=Msa0498450-mRNA-1
chr3_4 CDS 34859914 34859974 34859914 ID=Msa0498450-mRNA-1:cds;Parent=Msa0498450-mRNA-1
chr3_4 CDS 34860068 34860166 34860068 ID=Msa0498450-mRNA-1:cds;Parent=Msa0498450-mRNA-1
chr3_4 CDS 34861054 34861095 34861054 ID=Msa0498450-mRNA-1:cds;Parent=Msa0498450-mRNA-1
chr3_4 CDS 34861293 34861399 34861293 ID=Msa0498450-mRNA-1:cds;Parent=Msa0498450-mRNA-1
chr3_4 CDS 34861490 34861556 34861490 ID=Msa0498450-mRNA-1:cds;Parent=Msa0498450-mRNA-1
chr3_4 three_prime_UTR 34861557 34861563 34861557 ID=Msa0498450-mRNA-1:three_prime_utr;Parent=Msa0498450-mRNA-1
chr3_4 three_prime_UTR 34861600 34861696 34861600 ID=Msa0498450-mRNA-1:three_prime_utr;Parent=Msa0498450-mRNA-1
chr3_4 three_prime_UTR 34861730 34861941 34861730 ID=Msa0498450-mRNA-1:three_prime_utr;Parent=Msa0498450-mRNA-1
Gene Sequence

>Msa0498450

AAAACTAAAAATGAAGTTCTTGGAGAAGAGATAGACCATGTAAGGGTAATCACTTTGAACAGACCAAAGCAGTTGAATGCTATCTCACCTGACCTGGTATATCTGCTAGCAGAATATTTGGAAAAATGGGAGAAAGATGACAAAGCAGATCTAATTATCTTGAAGGTTGGAGCTGGTAGGGCTTTCTGTGCTGGAGGGGATTTGAGAGTATTCTATGGTGGCAAGACAACAAGGGATTCATGCCTTGAAGTGGTGTACAGATTTTACTGGCTTTGCCATCACATTAGTACCTATAAGAAAACTCAGGTTGCTCTTGTCCATGGAATTTCAATGGGTGGAGGTGCAGCATTGATGATCCCATTGAAATTCTCAGTTGTAACAGAAAAAACAGTCTTTGCTACTCCTGAAGCAAGTTTTGGATTTCATACTGATTGTGGCTTCTCATACTATCATTCTCGTTTGCCAGGGTTTTTAGCGCGGTTGAATGGAAAGGAATTAGTTGCGGCTGGACTGGCAACTCATTTTGTCACTTCTGAGAAAATTGTTGAGCTAGAGAAGCGCTTGATTAGATTAAATTCTGGTGATGAGAATGCTGTGAGATCAGTTATTGAAGAATTTTCATCAGAAGTTAAACTTGATGAAGAGAGTATCTTAAACAAGAAGTCAATAATTGATGAGTGTTTCTCAAAGGATTCTGTTGAAGAAATTATAAAAACATTGGAAGCTGAATCAAGCAAAGAAGGAAATGGATGGTTAGGTCCAGCTTTAAAAGGACTGAAAAGATCATCACCTACTGCATTGAAAATAGCATTAAGATCGGGTATTAGAGCTCTCACCATTGACAAGGACAATGCTCCAAAGTGGGATCCTCCATCACTTGACAAAGTAGATGATGAGAAGTTGGACTTAATTTTTAAGCCTTTTGACAAAGAATTAGAGCTTCAGATTCCAGAAAGTGTGGAATGCAGGTGGGATGGTAAATATGAGAATTCAGCTTATGCTGTTCCAAACAGAGAAACACAAATATCAGCTTAG

Protein sequence

>Msa0498450

KTKNEVLGEEIDHVRVITLNRPKQLNAISPDLVYLLAEYLEKWEKDDKADLIILKVGAGRAFCAGGDLRVFYGGKTTRDSCLEVVYRFYWLCHHISTYKKTQVALVHGISMGGGAALMIPLKFSVVTEKTVFATPEASFGFHTDCGFSYYHSRLPGFLARLNGKELVAAGLATHFVTSEKIVELEKRLIRLNSGDENAVRSVIEEFSSEVKLDEESILNKKSIIDECFSKDSVEEIIKTLEAESSKEGNGWLGPALKGLKRSSPTALKIALRSGIRALTIDKDNAPKWDPPSLDKVDDEKLDLIFKPFDKELELQIPESVECRWDGKYENSAYAVPNRETQISA*