Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374430 | XP_003602066.1 | 98.319 | 476 | 8 | 0 | 1 | 476 | 1 | 476 | 0.0 | 976 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374430 | sp|Q8VYX0|ILL6_ARATH | 71.891 | 402 | 108 | 1 | 73 | 474 | 65 | 461 | 0.0 | 604 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374430 | Q0GXX3 | 98.319 | 476 | 8 | 0 | 1 | 476 | 1 | 476 | 0.0 | 976 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0374350 | Msa0374430 | 0.994223 | 1.580558e-205 | -8.615850e-47 |
| Msa0374430 | Msa0469860 | 0.931025 | 6.944866e-94 | -8.615850e-47 |
| Msa0374430 | Msa0515450 | 0.923301 | 3.182093e-89 | -8.615850e-47 |
| Msa0374430 | Msa0548120 | 0.812663 | 3.784850e-51 | -8.615850e-47 |
| Msa0374430 | Msa0647030 | 0.800502 | 1.398393e-48 | -8.615850e-47 |
| Msa0374430 | Msa0653470 | 0.805860 | 1.088713e-49 | -8.615850e-47 |
| Msa0374430 | Msa0823540 | 0.805854 | 1.091588e-49 | -8.615850e-47 |
| Msa0374430 | Msa0837870 | 0.826360 | 2.831468e-54 | -8.615850e-47 |
| Msa0374430 | Msa1236440 | 0.806857 | 6.709099e-50 | -8.615850e-47 |
| Msa0374430 | Msa1277670 | 0.802615 | 5.157034e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374430 | MtrunA17_Chr3g0124881 | 98.319 | 476 | 8 | 0 | 1 | 476 | 1 | 476 | 0.0 | 976 |
| Msa0374430 | MtrunA17_Chr2g0330661 | 56.443 | 388 | 169 | 0 | 85 | 472 | 42 | 429 | 4.03e-162 | 466 |
| Msa0374430 | MtrunA17_Chr8g0364301 | 54.637 | 399 | 179 | 1 | 73 | 471 | 28 | 424 | 5.17e-162 | 465 |
| Msa0374430 | MtrunA17_Chr8g0371561 | 55.051 | 396 | 176 | 1 | 73 | 468 | 35 | 428 | 8.09e-162 | 465 |
| Msa0374430 | MtrunA17_Chr2g0330721 | 55.670 | 388 | 172 | 0 | 85 | 472 | 47 | 434 | 8.00e-157 | 452 |
| Msa0374430 | MtrunA17_Chr2g0328461 | 54.124 | 388 | 178 | 0 | 85 | 472 | 46 | 433 | 1.46e-152 | 442 |
| Msa0374430 | MtrunA17_Chr8g0341471 | 55.725 | 393 | 172 | 2 | 85 | 475 | 39 | 431 | 2.03e-152 | 441 |
| Msa0374430 | MtrunA17_Chr2g0330671 | 52.185 | 389 | 186 | 0 | 84 | 472 | 45 | 433 | 1.78e-149 | 434 |
| Msa0374430 | MtrunA17_Chr3g0128101 | 51.843 | 407 | 190 | 2 | 69 | 475 | 18 | 418 | 9.17e-147 | 426 |
| Msa0374430 | MtrunA17_Chr2g0328481 | 41.270 | 315 | 140 | 1 | 205 | 474 | 1 | 315 | 3.01e-82 | 257 |
| Msa0374430 | MtrunA17_Chr8g0364461 | 42.763 | 304 | 142 | 8 | 165 | 465 | 96 | 370 | 2.49e-73 | 237 |
| Msa0374430 | MtrunA17_Chr2g0330711 | 66.129 | 124 | 42 | 0 | 85 | 208 | 38 | 161 | 4.21e-53 | 176 |
| Msa0374430 | MtrunA17_Chr2g0328471 | 62.016 | 129 | 49 | 0 | 85 | 213 | 38 | 166 | 3.46e-51 | 172 |
| Msa0374430 | MtrunA17_Chr3g0128121 | 70.000 | 40 | 12 | 0 | 180 | 219 | 1 | 40 | 7.86e-13 | 63.2 |
| Msa0374430 | MtrunA17_Chr1g0158601 | 48.214 | 56 | 29 | 0 | 256 | 311 | 4 | 59 | 1.76e-12 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0374430 | AT1G44350.1 | 71.891 | 402 | 108 | 1 | 73 | 474 | 65 | 461 | 0.0 | 604 |
| Msa0374430 | AT1G51760.1 | 55.897 | 390 | 172 | 0 | 85 | 474 | 36 | 425 | 1.80e-164 | 472 |
| Msa0374430 | AT5G56660.1 | 55.754 | 391 | 170 | 2 | 84 | 474 | 38 | 425 | 3.09e-159 | 458 |
| Msa0374430 | AT3G02875.1 | 52.632 | 399 | 189 | 0 | 78 | 476 | 33 | 431 | 8.46e-154 | 445 |
| Msa0374430 | AT5G56650.1 | 55.385 | 390 | 171 | 2 | 85 | 474 | 38 | 424 | 4.15e-152 | 440 |
| Msa0374430 | AT1G51780.1 | 54.124 | 388 | 178 | 0 | 85 | 472 | 36 | 423 | 1.36e-150 | 436 |
| Msa0374430 | AT5G54140.1 | 52.094 | 382 | 182 | 1 | 95 | 475 | 39 | 420 | 5.72e-137 | 401 |
| Msa0374430 | AT5G56650.2 | 60.440 | 273 | 106 | 1 | 85 | 357 | 38 | 308 | 3.07e-113 | 336 |
| Msa0374430 | AT3G02875.2 | 54.122 | 279 | 128 | 0 | 78 | 356 | 33 | 311 | 7.32e-106 | 318 |
| Msa0374430 | AT3G02875.3 | 55.556 | 243 | 108 | 0 | 78 | 320 | 33 | 275 | 6.08e-94 | 287 |
Find 167 sgRNAs with CRISPR-Local
Find 547 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAAATAATAATTTAATTTA+AGG | 0.043031 | 3_1:-73896323 | Msa0374430:three_prime_UTR |
| TATAAAATATGTTCAGTTTC+TGG | 0.156638 | 3_1:-73896372 | Msa0374430:three_prime_UTR |
| TTCATCAACCGTTACAATTC+TGG | 0.191569 | 3_1:-73904492 | Msa0374430:CDS |
| TGCTGGGTCAAAAGAATTTC+AGG | 0.191754 | 3_1:-73896784 | Msa0374430:CDS |
| GAGCACCCGACTGGTATAAT+TGG | 0.212441 | 3_1:-73897478 | Msa0374430:CDS |
| AACTCGAGAGCATTTATTAA+AGG | 0.223748 | 3_1:-73902896 | Msa0374430:intron |
| GTGTCTGTAACTTCATTTAA+TGG | 0.238506 | 3_1:-73897165 | Msa0374430:CDS |
| GCACATGTGGCGATGCTTAT+TGG | 0.256111 | 3_1:-73902937 | Msa0374430:CDS |
| GTAGAATGTAGGCTCAAAAT+AGG | 0.303595 | 3_1:-73896424 | Msa0374430:three_prime_UTR |
| CCTTCAGCTTTCTTCTACAT+AGG | 0.313798 | 3_1:-73896707 | Msa0374430:CDS |
| TTATTTGTTGCTTGAGGTTA+AGG | 0.314495 | 3_1:-73896478 | Msa0374430:three_prime_UTR |
| TAACTCTGCTGATCCTGTTT+TGG | 0.324084 | 3_1:-73897371 | Msa0374430:CDS |
| AAAAGTGTCCATCGATTTGC+TGG | 0.355639 | 3_1:-73896801 | Msa0374430:CDS |
| AATAGGAAAGGGAAGAGGTT+GGG | 0.384922 | 3_1:-73896407 | Msa0374430:three_prime_UTR |
| TACCAGCTTCTTCTGCTGGC+TGG | 0.385270 | 3_1:+73897575 | None:intergenic |
| GGATTCATTGTAGGAGGGTG+TGG | 0.392480 | 3_1:-73903013 | Msa0374430:intron |
| CGGTGACAAACTGCGAAGTT+TGG | 0.403236 | 3_1:-73904328 | Msa0374430:CDS |
| GCAGCTGAAGCTGCCAAAAC+AGG | 0.403249 | 3_1:+73897358 | None:intergenic |
| CCGGCAAAATGCACGCTTGT+GGG | 0.404951 | 3_1:-73902966 | Msa0374430:CDS |
| GGACCCTTGTTGGCTGGATG+TGG | 0.406740 | 3_1:-73897445 | Msa0374430:CDS |
| GTATTAGACTGATATCATTA+AGG | 0.415050 | 3_1:+73896275 | None:intergenic |
| TACAATTCTGGAACAGTTTG+CGG | 0.417581 | 3_1:-73904480 | Msa0374430:CDS |
| GTCAAGACCTGGACCCTTGT+TGG | 0.418854 | 3_1:-73897455 | Msa0374430:CDS |
| AGTTTGGAACGAAGCATGTT+CGG | 0.420216 | 3_1:-73904312 | Msa0374430:CDS |
| CTCTGTTTATTTGTTGCTTG+AGG | 0.430365 | 3_1:-73896484 | Msa0374430:three_prime_UTR |
| TAATCTTCAGCACCCATCAT+AGG | 0.432732 | 3_1:+73896752 | None:intergenic |
| CCATTACCAGCTTCTTCTGC+TGG | 0.433623 | 3_1:+73897571 | None:intergenic |
| AGCTGCAGTTATCAGCATAC+AGG | 0.434234 | 3_1:-73897341 | Msa0374430:CDS |
| CTTTCTTCTACATAGGGATA+AGG | 0.436952 | 3_1:-73896700 | Msa0374430:CDS |
| GTTACGAGGGTTTGCGGCAG+AGG | 0.437592 | 3_1:+73897390 | None:intergenic |
| CAGGGTAGTCCCACCTATGA+TGG | 0.438244 | 3_1:-73896765 | Msa0374430:CDS |
| CGTTACCCGCTCGCGAAAAC+CGG | 0.438659 | 3_1:-73904137 | Msa0374430:CDS |
| AAAAGTAAAACAAAGAGTTT+CGG | 0.439627 | 3_1:+73904525 | None:intergenic |
| AGACCTGGACCCTTGTTGGC+TGG | 0.441336 | 3_1:-73897451 | Msa0374430:CDS |
| GATGAAGATGCTCTACCAAT+AGG | 0.441467 | 3_1:-73896626 | Msa0374430:CDS |
| AATGATACAAGACGGTGCTT+TGG | 0.442613 | 3_1:-73897539 | Msa0374430:CDS |
| CTAACAGGTAATTGTGCAAC+AGG | 0.443243 | 3_1:-73896924 | Msa0374430:intron |
| AATTTAATTTAAGGTGATCC+TGG | 0.444281 | 3_1:-73896314 | Msa0374430:three_prime_UTR |
| ATCAAATCCATTGGATTCAC+AGG | 0.446557 | 3_1:-73897302 | Msa0374430:intron |
| CTTCAGCTTTCTTCTACATA+GGG | 0.448301 | 3_1:-73896706 | Msa0374430:CDS |
| GATTGAGAATACTACTACAA+TGG | 0.452524 | 3_1:+73904768 | None:intergenic |
| CGGTCCACCCGTACCGATCC+AGG | 0.454128 | 3_1:+73904106 | None:intergenic |
| GATTTCCTTCTGTAGAATGT+AGG | 0.459085 | 3_1:-73896435 | Msa0374430:three_prime_UTR |
| CCACCAATGACCACTGAGTC+TGG | 0.459562 | 3_1:+73897120 | None:intergenic |
| GCTCTATTCTTTCTAGCAGC+TGG | 0.461269 | 3_1:+73897064 | None:intergenic |
| ATTGAGAATACTACTACAAT+GGG | 0.464755 | 3_1:+73904769 | None:intergenic |
| TTCAACCACTCCACCGTCTC+CGG | 0.468135 | 3_1:+73904263 | None:intergenic |
| AGCAGAGTTACGAGGGTTTG+CGG | 0.469164 | 3_1:+73897384 | None:intergenic |
| ATTGTAGGAGGGTGTGGAGT+GGG | 0.470188 | 3_1:-73903007 | Msa0374430:intron |
| ATAGGAAAGGGAAGAGGTTG+GGG | 0.471728 | 3_1:-73896406 | Msa0374430:three_prime_UTR |
| TATTTAATAGTTTAAACTGA+TGG | 0.473364 | 3_1:+73896339 | None:intergenic |
| CTCCCGCGAATCAAATCCAT+TGG | 0.474642 | 3_1:-73897311 | Msa0374430:CDS |
| AACATATAGAGAGAGGGGTA+AGG | 0.475147 | 3_1:+73904599 | None:intergenic |
| GATACAAGACGGTGCTTTGG+AGG | 0.475204 | 3_1:-73897536 | Msa0374430:CDS |
| TTATACCAGTCGGGTGCTCA+TGG | 0.477688 | 3_1:+73897482 | None:intergenic |
| CATGGATGCACTTCCCATCC+AGG | 0.479223 | 3_1:-73904060 | Msa0374430:intron |
| AAGAAAGGAGTTGGATCTGA+TGG | 0.482685 | 3_1:-73904171 | Msa0374430:CDS |
| AAGGAAGATCCATGAAAATC+CGG | 0.485905 | 3_1:-73904231 | Msa0374430:CDS |
| AGCACCCGACTGGTATAATT+GGG | 0.487049 | 3_1:-73897477 | Msa0374430:CDS |
| GCATGAACAGCAGCTCCTAT+TGG | 0.487268 | 3_1:+73896611 | None:intergenic |
| GTTAAGCGTAGCACAGTTGC+CGG | 0.491392 | 3_1:-73904282 | Msa0374430:CDS |
| AGCAAGGAACATATAGAGAG+AGG | 0.491440 | 3_1:+73904592 | None:intergenic |
| ACCGGTATTCGTGCCTGGAT+CGG | 0.491518 | 3_1:-73904119 | Msa0374430:CDS |
| GAGTACAAGTCTAAAGTTGC+CGG | 0.492102 | 3_1:-73902985 | Msa0374430:CDS |
| ACCGATCCAGGCACGAATAC+CGG | 0.494485 | 3_1:+73904118 | None:intergenic |
| CCTTTCCACCTGTACAAAAC+CGG | 0.496127 | 3_1:-73896536 | Msa0374430:three_prime_UTR |
| TCTCTTTATCGCAGCATCTC+CGG | 0.496863 | 3_1:+73904402 | None:intergenic |
| CGAAAACCGGTATTCGTGCC+TGG | 0.501566 | 3_1:-73904124 | Msa0374430:CDS |
| ATTCGTGCCTGGATCGGTAC+GGG | 0.502428 | 3_1:-73904113 | Msa0374430:CDS |
| GACGAGTCGTTTGATAAGAA+AGG | 0.507282 | 3_1:-73904186 | Msa0374430:CDS |
| TCGTTTGATAAGAAAGGAGT+TGG | 0.510161 | 3_1:-73904180 | Msa0374430:CDS |
| ATACCAGACTCAGTGGTCAT+TGG | 0.517150 | 3_1:-73897123 | Msa0374430:CDS |
| GCAAGGAACATATAGAGAGA+GGG | 0.528485 | 3_1:+73904593 | None:intergenic |
| GGTATAATTGGGTCAAGACC+TGG | 0.529655 | 3_1:-73897466 | Msa0374430:CDS |
| TGTAGGCTCAAAATAGGAAA+GGG | 0.530210 | 3_1:-73896418 | Msa0374430:three_prime_UTR |
| TATTCGTGCCTGGATCGGTA+CGG | 0.530628 | 3_1:-73904114 | Msa0374430:CDS |
| AGACGGTGCTTTGGAGGATG+TGG | 0.531228 | 3_1:-73897530 | Msa0374430:CDS |
| CGTGACACGGAAGGCTAAGA+CGG | 0.531811 | 3_1:-73904348 | Msa0374430:CDS |
| AAGGATGAGAGATATGAAGA+AGG | 0.533326 | 3_1:+73904618 | None:intergenic |
| AATCCAATGGATTTGATTCG+CGG | 0.533440 | 3_1:+73897308 | None:intergenic |
| CCAGCAGAAGAAGCTGGTAA+TGG | 0.533448 | 3_1:-73897571 | Msa0374430:CDS |
| CATCCAGCCAACAAGGGTCC+AGG | 0.535174 | 3_1:+73897448 | None:intergenic |
| TAGAAGTGCAATCACCTGGA+TGG | 0.537823 | 3_1:+73904046 | None:intergenic |
| GAACGAAGCATGTTCGGAAG+CGG | 0.538563 | 3_1:-73904306 | Msa0374430:CDS |
| AAATAGGAAAGGGAAGAGGT+TGG | 0.539613 | 3_1:-73896408 | Msa0374430:three_prime_UTR |
| AGGGTAGTCCCACCTATGAT+GGG | 0.539797 | 3_1:-73896764 | Msa0374430:CDS |
| CCAGACTCAGTGGTCATTGG+TGG | 0.543153 | 3_1:-73897120 | Msa0374430:CDS |
| TAGTGTTTACAGTTGCTTTG+CGG | 0.543691 | 3_1:-73896900 | Msa0374430:CDS |
| GGAAGAAAGTACAGAAAGCA+AGG | 0.543987 | 3_1:+73904576 | None:intergenic |
| TCAATGAACATGGTTGATCT+CGG | 0.544052 | 3_1:-73896568 | Msa0374430:exon |
| TTGAGCCTACATTCTACAGA+AGG | 0.544970 | 3_1:+73896430 | None:intergenic |
| AGAAGTGCAATCACCTGGAT+GGG | 0.547453 | 3_1:+73904047 | None:intergenic |
| TCAGCTCTAACAGCAACAAA+AGG | 0.547742 | 3_1:+73904083 | None:intergenic |
| GCTGGGTCAAAAGAATTTCA+GGG | 0.548098 | 3_1:-73896783 | Msa0374430:CDS |
| GCCGGCAAAATGCACGCTTG+TGG | 0.548294 | 3_1:-73902967 | Msa0374430:CDS |
| AAATCCACATCCAGCCAACA+AGG | 0.550161 | 3_1:+73897441 | None:intergenic |
| TTGACCCAATTATACCAGTC+GGG | 0.552443 | 3_1:+73897473 | None:intergenic |
| ATCCAATGGATTTGATTCGC+GGG | 0.553047 | 3_1:+73897309 | None:intergenic |
| TGTTGCTGTTAGAGCTGACA+TGG | 0.553139 | 3_1:-73904078 | Msa0374430:CDS |
| GCTGCTAGAAAGAATAGAGC+AGG | 0.556046 | 3_1:-73897061 | Msa0374430:intron |
| ATGTAGGCTCAAAATAGGAA+AGG | 0.561312 | 3_1:-73896419 | Msa0374430:three_prime_UTR |
| CATGAGGAGGACGGATACAC+CGG | 0.565096 | 3_1:+73896509 | None:intergenic |
| TTGTACAGGTGGAAAGGACA+TGG | 0.566531 | 3_1:+73896542 | None:intergenic |
| TTCCAGCCAGCAGAAGAAGC+TGG | 0.566596 | 3_1:-73897577 | Msa0374430:CDS |
| GGAAGTTGACTTCTTTGAGA+AGG | 0.569915 | 3_1:-73896879 | Msa0374430:CDS |
| CGTAGCACAGTTGCCGGAGA+CGG | 0.570818 | 3_1:-73904276 | Msa0374430:CDS |
| TGGTCATCATTAACCGTGGG+AGG | 0.572106 | 3_1:+73896842 | None:intergenic |
| GAGATCAACCATGTTCATTG+AGG | 0.577750 | 3_1:+73896570 | None:intergenic |
| TCTTCAGCACCCATCATAGG+TGG | 0.579933 | 3_1:+73896755 | None:intergenic |
| TATACCAGTCGGGTGCTCAT+GGG | 0.580200 | 3_1:+73897483 | None:intergenic |
| GGTGTTAGAAAACGCTCTGA+AGG | 0.580387 | 3_1:+73897095 | None:intergenic |
| GGGATAAGGAATGAAACACT+AGG | 0.581663 | 3_1:-73896686 | Msa0374430:CDS |
| ATTTCCTCAAAAGCTAACTC+CGG | 0.582969 | 3_1:+73904212 | None:intergenic |
| ACAAATAAACAGAGAACATG+AGG | 0.583201 | 3_1:+73896493 | None:intergenic |
| GTATCCCATGAGCACCCGAC+TGG | 0.585430 | 3_1:-73897487 | Msa0374430:CDS |
| CTCAAAATAGGAAAGGGAAG+AGG | 0.589064 | 3_1:-73896412 | Msa0374430:three_prime_UTR |
| ATTGAGGTACCTCTCTGCAA+TGG | 0.594556 | 3_1:+73896586 | None:intergenic |
| GAATAAAACACGGTCGTAAG+CGG | 0.595337 | 3_1:+73904430 | None:intergenic |
| GGACGGATACACCGGCGTAC+CGG | 0.595909 | 3_1:+73896517 | None:intergenic |
| CAAGGAACATATAGAGAGAG+GGG | 0.597751 | 3_1:+73904594 | None:intergenic |
| AGCACAGTTGCCGGAGACGG+TGG | 0.598476 | 3_1:-73904273 | Msa0374430:CDS |
| GGCAAAACCTGTGAATCCAA+TGG | 0.598479 | 3_1:+73897295 | None:intergenic |
| GAGGTACCTCTCTGCAATGG+TGG | 0.601539 | 3_1:+73896589 | None:intergenic |
| CGGTGCTTTGGAGGATGTGG+AGG | 0.603018 | 3_1:-73897527 | Msa0374430:CDS |
| CATTGTAGGAGGGTGTGGAG+TGG | 0.603243 | 3_1:-73903008 | Msa0374430:intron |
| AGAAAGCTGAAGGAATGACC+TGG | 0.604705 | 3_1:+73896717 | None:intergenic |
| GTTAAGGAACGGTAGAAACC+AGG | 0.605725 | 3_1:-73896462 | Msa0374430:three_prime_UTR |
| AGTTGCCGGAGACGGTGGAG+TGG | 0.607589 | 3_1:-73904268 | Msa0374430:CDS |
| CCTATGTAGAAGAAAGCTGA+AGG | 0.611074 | 3_1:+73896707 | None:intergenic |
| TCTTCATCAATCATGAAATG+TGG | 0.612062 | 3_1:+73896641 | None:intergenic |
| TCTGTAACTTCATTTAATGG+AGG | 0.613388 | 3_1:-73897162 | Msa0374430:CDS |
| TACAGAAGGAAATCATAACC+TGG | 0.614425 | 3_1:+73896444 | None:intergenic |
| ACACGGTCGTAAGCGGCGGA+AGG | 0.615680 | 3_1:+73904437 | None:intergenic |
| AAACTGTTCCAGAATTGTAA+CGG | 0.617459 | 3_1:+73904484 | None:intergenic |
| TTGTGGGCACGACGCACATG+TGG | 0.617838 | 3_1:-73902950 | Msa0374430:CDS |
| CTTGACCCAATTATACCAGT+CGG | 0.618518 | 3_1:+73897472 | None:intergenic |
| CATTTGGTCATCATTAACCG+TGG | 0.620831 | 3_1:+73896838 | None:intergenic |
| GAAAGCTGAAGGAATGACCT+GGG | 0.621446 | 3_1:+73896718 | None:intergenic |
| AACAGAGAACATGAGGAGGA+CGG | 0.623333 | 3_1:+73896500 | None:intergenic |
| CAGGATCAGCAGAGTTACGA+GGG | 0.623679 | 3_1:+73897377 | None:intergenic |
| GAGAGGTACCTCAATGAACA+TGG | 0.623955 | 3_1:-73896578 | Msa0374430:CDS |
| ATTTGGTCATCATTAACCGT+GGG | 0.624369 | 3_1:+73896839 | None:intergenic |
| AAAATATGTTCAGTTTCTGG+AGG | 0.624612 | 3_1:-73896369 | Msa0374430:three_prime_UTR |
| GCTCTAACAGCAACAAAAGG+CGG | 0.627174 | 3_1:+73904086 | None:intergenic |
| GGTCATCATTAACCGTGGGA+GGG | 0.627405 | 3_1:+73896843 | None:intergenic |
| GGATAAGGAATGAAACACTA+GGG | 0.628755 | 3_1:-73896685 | Msa0374430:CDS |
| CCTGTACAAAACCGGTACGC+CGG | 0.629114 | 3_1:-73896528 | Msa0374430:three_prime_UTR |
| GTACACTATTTACCCTCCCA+CGG | 0.629998 | 3_1:-73896855 | Msa0374430:CDS |
| GGAAAAGTCAATCTTACACC+AGG | 0.630702 | 3_1:+73896296 | None:intergenic |
| GCTGCAGTTATCAGCATACA+GGG | 0.634727 | 3_1:-73897340 | Msa0374430:CDS |
| CTTCAGCACCCATCATAGGT+GGG | 0.648292 | 3_1:+73896756 | None:intergenic |
| TAAAACACGGTCGTAAGCGG+CGG | 0.649031 | 3_1:+73904433 | None:intergenic |
| AAAGTGTCCATCGATTTGCT+GGG | 0.656755 | 3_1:-73896800 | Msa0374430:CDS |
| AGTGGTTGAAAAGTGTTCGA+AGG | 0.657989 | 3_1:-73904250 | Msa0374430:CDS |
| CGTGCCTGGATCGGTACGGG+TGG | 0.661097 | 3_1:-73904110 | Msa0374430:CDS |
| CAGACTCAGTGGTCATTGGT+GGG | 0.661149 | 3_1:-73897119 | Msa0374430:CDS |
| ACAGGATCAGCAGAGTTACG+AGG | 0.661867 | 3_1:+73897376 | None:intergenic |
| GCAAAGCGAATGATACAAGA+CGG | 0.669852 | 3_1:-73897547 | Msa0374430:CDS |
| ACACTAGGGTCTACTCACAC+AGG | 0.673988 | 3_1:-73896671 | Msa0374430:CDS |
| AAGGAGAATTCGAACACGTG+CGG | 0.676224 | 3_1:+73904662 | None:intergenic |
| AATAAACAGAGAACATGAGG+AGG | 0.681654 | 3_1:+73896496 | None:intergenic |
| AATCCACATCCAGCCAACAA+GGG | 0.683654 | 3_1:+73897442 | None:intergenic |
| TGTTGCTTGAGGTTAAGGAA+CGG | 0.683756 | 3_1:-73896473 | Msa0374430:three_prime_UTR |
| TTTATCGCAGCATCTCCGGT+CGG | 0.685671 | 3_1:+73904406 | None:intergenic |
| TGACATGATACCAGACTCAG+TGG | 0.696436 | 3_1:-73897130 | Msa0374430:CDS |
| TTCATGCCACCATTGCAGAG+AGG | 0.728117 | 3_1:-73896595 | Msa0374430:CDS |
| TCCGGTCGGAGAATAAAACA+CGG | 0.764715 | 3_1:+73904420 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAATAAAAAAAAAAAAAA+AGG | + | chr3_1:73897307-73897326 | None:intergenic | 0.0% |
| !! | ATAATATTAATTAATATAAA+CGG | + | chr3_1:73899689-73899708 | None:intergenic | 0.0% |
| !!! | TTAAATAATAATTTAATTTA+AGG | - | chr3_1:73904718-73904737 | Msa0374430:five_prime_UTR | 0.0% |
| !!! | TAAAAGAACTTTAAAAAATT+TGG | + | chr3_1:73896358-73896377 | None:intergenic | 10.0% |
| !!! | CTATTTTATTTTTTTTTGAA+AGG | - | chr3_1:73897046-73897065 | Msa0374430:intron | 10.0% |
| !!! | AAATTAAACTTTTTAATTCA+TGG | + | chr3_1:73897654-73897673 | None:intergenic | 10.0% |
| !! | TATTTATTACTTTATATTGT+GGG | + | chr3_1:73898330-73898349 | None:intergenic | 10.0% |
| !! | TTATTTATTACTTTATATTG+TGG | + | chr3_1:73898331-73898350 | None:intergenic | 10.0% |
| !! | TAATCACATAAAATATAAAT+CGG | - | chr3_1:73898474-73898493 | Msa0374430:intron | 10.0% |
| !!! | AGATTTAAAATTAAATTAAC+AGG | + | chr3_1:73899269-73899288 | None:intergenic | 10.0% |
| !! | TTATGAAAAAGATTTATTAT+CGG | - | chr3_1:73899402-73899421 | Msa0374430:intron | 10.0% |
| !!! | AATTTTTTTATCAAAATCAA+AGG | - | chr3_1:73901050-73901069 | Msa0374430:intron | 10.0% |
| !!! | TTATTTTTAAATGAAAAGAT+TGG | + | chr3_1:73902466-73902485 | None:intergenic | 10.0% |
| !!! | TTAAAGCTTTAAATATTTCA+TGG | + | chr3_1:73897791-73897810 | None:intergenic | 15.0% |
| !! | AAAATTAAATAATACAGCTA+AGG | + | chr3_1:73897924-73897943 | None:intergenic | 15.0% |
| !!! | GTATAAACTTATTGATTAAA+AGG | + | chr3_1:73898530-73898549 | None:intergenic | 15.0% |
| !!! | TTTTTCATAAGTTTTATTTG+TGG | + | chr3_1:73899392-73899411 | None:intergenic | 15.0% |
| !! | TCTATATGTAAGTTTATATA+TGG | - | chr3_1:73900399-73900418 | Msa0374430:intron | 15.0% |
| !!! | TCTAATTTTTGTAGAATTAA+GGG | + | chr3_1:73900941-73900960 | None:intergenic | 15.0% |
| !!! | ATCTAATTTTTGTAGAATTA+AGG | + | chr3_1:73900942-73900961 | None:intergenic | 15.0% |
| !!! | ACTGATTTTGATTTTTATAA+AGG | + | chr3_1:73901100-73901119 | None:intergenic | 15.0% |
| !!! | TTCTGTTTCTATATAATTTT+GGG | - | chr3_1:73901368-73901387 | Msa0374430:intron | 15.0% |
| !!! | TCAATTTAACTAAAGATTTT+AGG | - | chr3_1:73903031-73903050 | Msa0374430:intron | 15.0% |
| !! | TATTTAATAGTTTAAACTGA+TGG | + | chr3_1:73904705-73904724 | None:intergenic | 15.0% |
| !!! | AGAACTTTAAAAAATTTGGA+CGG | + | chr3_1:73896354-73896373 | None:intergenic | 20.0% |
| !!! | TTTTGTTTTATTCTTTCAGT+TGG | + | chr3_1:73896489-73896508 | None:intergenic | 20.0% |
| !! | AAAAGTAAAACAAAGAGTTT+CGG | + | chr3_1:73896519-73896538 | None:intergenic | 20.0% |
| !!! | CTTATTATATTACTGTTTCT+AGG | + | chr3_1:73897125-73897144 | None:intergenic | 20.0% |
| !!! | TCATTTTTTTTTATGCAACT+TGG | - | chr3_1:73897173-73897192 | Msa0374430:intron | 20.0% |
| !!! | ATTGTGTTTTTTCATAATGT+TGG | - | chr3_1:73897690-73897709 | Msa0374430:intron | 20.0% |
| !! | TAGAATCATTAATAACAAGT+GGG | + | chr3_1:73897820-73897839 | None:intergenic | 20.0% |
| !! | ATAGAATCATTAATAACAAG+TGG | + | chr3_1:73897821-73897840 | None:intergenic | 20.0% |
| !!! | ATGATTCTATTAATTTCTAG+AGG | - | chr3_1:73897831-73897850 | Msa0374430:intron | 20.0% |
| !! | TAAATTCTTGAAACACTTTA+TGG | + | chr3_1:73897884-73897903 | None:intergenic | 20.0% |
| !!! | ATCTTTTAGTTTTAAATCCT+TGG | - | chr3_1:73898237-73898256 | Msa0374430:intron | 20.0% |
| !!! | AGTTTTTTTTTTTACCAGAA+TGG | - | chr3_1:73898445-73898464 | Msa0374430:intron | 20.0% |
| !!! | TCAACAAGGTTTTATATTAA+AGG | + | chr3_1:73898558-73898577 | None:intergenic | 20.0% |
| !! | TTTAACAAAATGATAGTAGT+AGG | - | chr3_1:73898594-73898613 | Msa0374430:intron | 20.0% |
| !! | TAACAATTTACATTCATTGA+TGG | - | chr3_1:73898755-73898774 | Msa0374430:intron | 20.0% |
| !!! | TACTGGAAATGATTTTTAAT+AGG | - | chr3_1:73899022-73899041 | Msa0374430:intron | 20.0% |
| !!! | ACTGGAAATGATTTTTAATA+GGG | - | chr3_1:73899023-73899042 | Msa0374430:intron | 20.0% |
| !!! | CTATAAGTTTTGAATTTTTC+CGG | - | chr3_1:73899287-73899306 | Msa0374430:intron | 20.0% |
| !!! | CAGTTGTTATCAATATATTT+TGG | - | chr3_1:73899539-73899558 | Msa0374430:intron | 20.0% |
| !!! | TTAAGTGATGAATTTGTTAT+AGG | + | chr3_1:73899877-73899896 | None:intergenic | 20.0% |
| !!! | TTTTTTAGGGATAATAGTTA+TGG | - | chr3_1:73900018-73900037 | Msa0374430:intron | 20.0% |
| !!! | TCAACCTTAATTTTTTTTAG+TGG | - | chr3_1:73900066-73900085 | Msa0374430:intron | 20.0% |
| !!! | AATGGTTCTTATATGATTTT+TGG | - | chr3_1:73900256-73900275 | Msa0374430:intron | 20.0% |
| !!! | TTTTCTCAACTTTCATTTTT+AGG | - | chr3_1:73900632-73900651 | Msa0374430:intron | 20.0% |
| !!! | TTTCTCAACTTTCATTTTTA+GGG | - | chr3_1:73900633-73900652 | Msa0374430:intron | 20.0% |
| !!! | GTTCAAAAAGTACAAATATT+TGG | + | chr3_1:73900767-73900786 | None:intergenic | 20.0% |
| !! | TGTCGTATCAAAAATAATTA+AGG | - | chr3_1:73900812-73900831 | Msa0374430:intron | 20.0% |
| !! | TTATATTAAGCTTGATATCA+TGG | - | chr3_1:73900890-73900909 | Msa0374430:intron | 20.0% |
| !!! | TAATTTTTGTAGAATTAAGG+GGG | + | chr3_1:73900939-73900958 | None:intergenic | 20.0% |
| !!! | CTAATTTTTGTAGAATTAAG+GGG | + | chr3_1:73900940-73900959 | None:intergenic | 20.0% |
| !!! | ATGGGAGATTTTATTTATAA+AGG | + | chr3_1:73901143-73901162 | None:intergenic | 20.0% |
| !!! | TTTTCTTTACAATTTCACAT+GGG | + | chr3_1:73901161-73901180 | None:intergenic | 20.0% |
| !!! | ATTTTCTTTACAATTTCACA+TGG | + | chr3_1:73901162-73901181 | None:intergenic | 20.0% |
| !! | TACGTTTATATGGTTATTTA+CGG | - | chr3_1:73901228-73901247 | Msa0374430:intron | 20.0% |
| !!! | GTTCTGTTTCTATATAATTT+TGG | - | chr3_1:73901367-73901386 | Msa0374430:intron | 20.0% |
| !!! | TATAGCTTCTTCAATTTTTT+TGG | - | chr3_1:73901501-73901520 | Msa0374430:intron | 20.0% |
| !!! | GTTTGAGTTATTATTATAGA+TGG | + | chr3_1:73901543-73901562 | None:intergenic | 20.0% |
| !!! | TGTTATTTTTTTTGTCAAGA+GGG | + | chr3_1:73902009-73902028 | None:intergenic | 20.0% |
| !!! | ATGTTATTTTTTTTGTCAAG+AGG | + | chr3_1:73902010-73902029 | None:intergenic | 20.0% |
| !!! | TAAAATACTCCTTTTTTAGA+AGG | + | chr3_1:73902216-73902235 | None:intergenic | 20.0% |
| !!! | CACTTTGAAAAAAATAATGA+TGG | - | chr3_1:73902254-73902273 | Msa0374430:intron | 20.0% |
| !! | CAATAAAATTGATAAATGAC+AGG | + | chr3_1:73902322-73902341 | None:intergenic | 20.0% |
| !! | AACAAACAAATTAAACAAGA+AGG | - | chr3_1:73902548-73902567 | Msa0374430:intron | 20.0% |
| !! | GTAAGATTCGATAAAAATAA+TGG | - | chr3_1:73902570-73902589 | Msa0374430:intron | 20.0% |
| !!! | CATTTTAAAACAAAGGAAAT+TGG | - | chr3_1:73902733-73902752 | Msa0374430:intron | 20.0% |
| !!! | TAAGGAAACAATATTTTCAA+TGG | + | chr3_1:73903160-73903179 | None:intergenic | 20.0% |
| !!! | CGAAAATATTTTTAAAAAGC+TGG | + | chr3_1:73903186-73903205 | None:intergenic | 20.0% |
| !! | GATAAAAAATGCTAAGTTAA+AGG | + | chr3_1:73903415-73903434 | None:intergenic | 20.0% |
| !! | TATAAAATATGTTCAGTTTC+TGG | - | chr3_1:73904669-73904688 | Msa0374430:five_prime_UTR | 20.0% |
| ! | GTTAGACATACTAATTTCAA+TGG | + | chr3_1:73897103-73897122 | None:intergenic | 25.0% |
| !!! | TATTAAAAGTTTTAGCGAGT+TGG | - | chr3_1:73897320-73897339 | Msa0374430:CDS | 25.0% |
| !! | ATTTTGTCTTCTGAATTATG+AGG | - | chr3_1:73897596-73897615 | Msa0374430:CDS | 25.0% |
| !!! | AGTTTAATTTTTGCACTTGT+TGG | - | chr3_1:73897664-73897683 | Msa0374430:intron | 25.0% |
| !!! | TGAAGAGTGTATATTTTTCT+TGG | - | chr3_1:73897716-73897735 | Msa0374430:intron | 25.0% |
| !!! | AGATGTTTTTAGCTTTATTG+TGG | - | chr3_1:73897949-73897968 | Msa0374430:intron | 25.0% |
| ! | TTCAATTTCTTGTGAAAGTT+AGG | + | chr3_1:73897978-73897997 | None:intergenic | 25.0% |
| !! | TAAAAGCCGAAACTTTTTAT+TGG | + | chr3_1:73898785-73898804 | None:intergenic | 25.0% |
| !! | ATAAAAAGTTTCGGCTTTTA+CGG | - | chr3_1:73898785-73898804 | Msa0374430:intron | 25.0% |
| ! | ATTTCCAGTAAGAAAAAAGA+GGG | + | chr3_1:73899012-73899031 | None:intergenic | 25.0% |
| !! | CTGGAAATGATTTTTAATAG+GGG | - | chr3_1:73899024-73899043 | Msa0374430:intron | 25.0% |
| !!! | TAAATTAACAGGTTTTGTAG+AGG | + | chr3_1:73899258-73899277 | None:intergenic | 25.0% |
| ! | TAATCAATAGCTTCATTGTA+AGG | - | chr3_1:73899365-73899384 | Msa0374430:intron | 25.0% |
| ! | AAAGATCTGTTACTATTAAG+TGG | + | chr3_1:73899802-73899821 | None:intergenic | 25.0% |
| ! | TCAAAGATGAGTAATAGTTA+TGG | - | chr3_1:73899990-73900009 | Msa0374430:intron | 25.0% |
| !!! | TAGTTATGGTTGCTTTTTTT+AGG | - | chr3_1:73900004-73900023 | Msa0374430:intron | 25.0% |
| !!! | AGTTATGGTTGCTTTTTTTA+GGG | - | chr3_1:73900005-73900024 | Msa0374430:intron | 25.0% |
| !!! | CTTAATTTTTTTTAGTGGCT+GGG | - | chr3_1:73900071-73900090 | Msa0374430:intron | 25.0% |
| !!! | TTAATTTTTTTTAGTGGCTG+GGG | - | chr3_1:73900072-73900091 | Msa0374430:intron | 25.0% |
| ! | AACAATGCATAATATATGCA+AGG | + | chr3_1:73900111-73900130 | None:intergenic | 25.0% |
| ! | GACTTACAAAAAATTGTTAC+TGG | - | chr3_1:73900448-73900467 | Msa0374430:intron | 25.0% |
| !! | AAACCATGAAACATCAATTT+TGG | - | chr3_1:73900723-73900742 | Msa0374430:intron | 25.0% |
| ! | CTGTCGATATATCAAATTTA+CGG | + | chr3_1:73900996-73901015 | None:intergenic | 25.0% |
| ! | GTAAATTTGATATATCGACA+GGG | - | chr3_1:73900995-73901014 | Msa0374430:intron | 25.0% |
| ! | TAAATTTGATATATCGACAG+GGG | - | chr3_1:73900996-73901015 | Msa0374430:intron | 25.0% |
| !!! | AAATAGTTTTAGTGTGTGTT+TGG | + | chr3_1:73901466-73901485 | None:intergenic | 25.0% |
| ! | CAAAGACAACTTTATTCATA+AGG | + | chr3_1:73901801-73901820 | None:intergenic | 25.0% |
| ! | TTAAAGAGAAAAGATGATGT+TGG | - | chr3_1:73901873-73901892 | Msa0374430:intron | 25.0% |
| ! | ACTAGTCATTGAAACAAATA+TGG | + | chr3_1:73902106-73902125 | None:intergenic | 25.0% |
| !! | TTTGTTGATGAATATTGACT+CGG | - | chr3_1:73902170-73902189 | Msa0374430:intron | 25.0% |
| !!! | CATTTTAAAACAAAGGAAGT+TGG | - | chr3_1:73902406-73902425 | Msa0374430:intron | 25.0% |
| ! | AGATTCGATAAAAATAATGG+TGG | - | chr3_1:73902573-73902592 | Msa0374430:intron | 25.0% |
| !!! | CAGTTACCATTTTAAAAACA+CGG | + | chr3_1:73903285-73903304 | None:intergenic | 25.0% |
| !!! | ATTTTTTATCTGTCATCACA+GGG | - | chr3_1:73903425-73903444 | Msa0374430:intron | 25.0% |
| ! | ATAGAGACAAATAGTTAGTT+GGG | + | chr3_1:73903842-73903861 | None:intergenic | 25.0% |
| ! | AATAGAGACAAATAGTTAGT+TGG | + | chr3_1:73903843-73903862 | None:intergenic | 25.0% |
| !! | TTTGTCTCTATTTAAAACTC+AGG | - | chr3_1:73903851-73903870 | Msa0374430:intron | 25.0% |
| !! | AATTTAATTTAAGGTGATCC+TGG | - | chr3_1:73904727-73904746 | Msa0374430:five_prime_UTR | 25.0% |
| ! | GTATTAGACTGATATCATTA+AGG | + | chr3_1:73904769-73904788 | None:intergenic | 25.0% |
| AGATAGAAAAAGAAGGAAGA+AGG | + | chr3_1:73896401-73896420 | None:intergenic | 30.0% | |
| AAACTGTTCCAGAATTGTAA+CGG | + | chr3_1:73896560-73896579 | None:intergenic | 30.0% | |
| ATAAAATAGTACTCGTAGAG+TGG | + | chr3_1:73897035-73897054 | None:intergenic | 30.0% | |
| !!! | TTTTTTATGCAACTTGGCTT+AGG | - | chr3_1:73897179-73897198 | Msa0374430:intron | 30.0% |
| ATCTTTCTCGCAAAAGATTA+TGG | - | chr3_1:73897276-73897295 | Msa0374430:intron | 30.0% | |
| AAGAGAGAAAAAGACAAATC+AGG | + | chr3_1:73897433-73897452 | None:intergenic | 30.0% | |
| ATGCATCAATGATAGTACTA+TGG | + | chr3_1:73898003-73898022 | None:intergenic | 30.0% | |
| ACTATCATTGATGCATTGTT+TGG | - | chr3_1:73898007-73898026 | Msa0374430:intron | 30.0% | |
| !! | AACTCGAGAGCATTTATTAA+AGG | - | chr3_1:73898145-73898164 | Msa0374430:intron | 30.0% |
| ACTTTATATTGTGGGATTGA+AGG | + | chr3_1:73898322-73898341 | None:intergenic | 30.0% | |
| TGTGATTATATAAGCCATTC+TGG | + | chr3_1:73898462-73898481 | None:intergenic | 30.0% | |
| ATGTCGTGATTTAATCAACA+AGG | + | chr3_1:73898572-73898591 | None:intergenic | 30.0% | |
| AGAGATAGTTCGTTTAAGAA+AGG | - | chr3_1:73898668-73898687 | Msa0374430:intron | 30.0% | |
| ! | TCATAGTTTAGTTCGACAAA+TGG | - | chr3_1:73898706-73898725 | Msa0374430:intron | 30.0% |
| ! | CATAGTTTAGTTCGACAAAT+GGG | - | chr3_1:73898707-73898726 | Msa0374430:intron | 30.0% |
| GGTCAACCAATAAAAAGTTT+CGG | - | chr3_1:73898776-73898795 | Msa0374430:intron | 30.0% | |
| ! | AACGTCTTTAAGAATGGATA+TGG | + | chr3_1:73898823-73898842 | None:intergenic | 30.0% |
| ATACATTGGTCCAAACTAAA+GGG | + | chr3_1:73898865-73898884 | None:intergenic | 30.0% | |
| TATTCTTGTAATAGGGTGTA+TGG | + | chr3_1:73898953-73898972 | None:intergenic | 30.0% | |
| TACCGTGTATTCTTGTAATA+GGG | + | chr3_1:73898960-73898979 | None:intergenic | 30.0% | |
| TTACCGTGTATTCTTGTAAT+AGG | + | chr3_1:73898961-73898980 | None:intergenic | 30.0% | |
| CATTTCCAGTAAGAAAAAAG+AGG | + | chr3_1:73899013-73899032 | None:intergenic | 30.0% | |
| ! | GAAATGATTTTTAATAGGGG+TGG | - | chr3_1:73899027-73899046 | Msa0374430:intron | 30.0% |
| !! | ACCAATAGGCTTTATTGTAT+GGG | + | chr3_1:73899053-73899072 | None:intergenic | 30.0% |
| !! | TACCAATAGGCTTTATTGTA+TGG | + | chr3_1:73899054-73899073 | None:intergenic | 30.0% |
| AGAGGAAGAAGAGAAAAAAA+AGG | + | chr3_1:73899131-73899150 | None:intergenic | 30.0% | |
| ATATCATGGTGATAGTTACA+CGG | + | chr3_1:73899223-73899242 | None:intergenic | 30.0% | |
| GGAGAAAAATAGGAATATCA+TGG | + | chr3_1:73899237-73899256 | None:intergenic | 30.0% | |
| ! | GTTTTGTAGAGGAGAAAAAT+AGG | + | chr3_1:73899247-73899266 | None:intergenic | 30.0% |
| ! | TAGTTTGATTTCTTGATACG+CGG | + | chr3_1:73899347-73899366 | None:intergenic | 30.0% |
| ! | CTTCAATTTCATCTAGAATC+TGG | + | chr3_1:73899489-73899508 | None:intergenic | 30.0% |
| !! | ATCAAAGGTCAGATTTTAAC+TGG | - | chr3_1:73899709-73899728 | Msa0374430:intron | 30.0% |
| !!! | AGATTTTAACTGGTCTAAGT+TGG | - | chr3_1:73899719-73899738 | Msa0374430:intron | 30.0% |
| !! | ACAAGAGGTTTCTTTTAACT+TGG | + | chr3_1:73899763-73899782 | None:intergenic | 30.0% |
| AGAATGTTTAGACAAACAAG+AGG | + | chr3_1:73899778-73899797 | None:intergenic | 30.0% | |
| ! | GAGGAAGTAAATTGATCTTT+TGG | + | chr3_1:73899844-73899863 | None:intergenic | 30.0% |
| !! | GATGAATTTGTTATAGGCAA+AGG | + | chr3_1:73899871-73899890 | None:intergenic | 30.0% |
| ACAAATTCATCACTTAACAG+TGG | - | chr3_1:73899880-73899899 | Msa0374430:intron | 30.0% | |
| CAAATTCATCACTTAACAGT+GGG | - | chr3_1:73899881-73899900 | Msa0374430:intron | 30.0% | |
| ACTTACTACTATAGGACAAA+CGG | - | chr3_1:73899953-73899972 | Msa0374430:intron | 30.0% | |
| ! | ATAGTTATGGTTGCTATTCA+CGG | - | chr3_1:73900031-73900050 | Msa0374430:intron | 30.0% |
| CCAGCCACTAAAAAAAATTA+AGG | + | chr3_1:73900073-73900092 | None:intergenic | 30.0% | |
| !!! | CCTTAATTTTTTTTAGTGGC+TGG | - | chr3_1:73900070-73900089 | Msa0374430:intron | 30.0% |
| !! | GGTTCTTATATGATTTTTGG+TGG | - | chr3_1:73900259-73900278 | Msa0374430:intron | 30.0% |
| !!! | TCTTATATGATTTTTGGTGG+TGG | - | chr3_1:73900262-73900281 | Msa0374430:intron | 30.0% |
| TGCATAATATATGCAAGGTT+CGG | + | chr3_1:73900301-73900320 | None:intergenic | 30.0% | |
| GACAATGCATAATATATGCA+AGG | + | chr3_1:73900306-73900325 | None:intergenic | 30.0% | |
| ! | TTATCTAATTACTCCCCTTT+TGG | - | chr3_1:73900587-73900606 | Msa0374430:intron | 30.0% |
| ! | TGAGAAAAAGTACAACTCAA+TGG | + | chr3_1:73900620-73900639 | None:intergenic | 30.0% |
| ACACCAAAATTGATGTTTCA+TGG | + | chr3_1:73900729-73900748 | None:intergenic | 30.0% | |
| !!! | GAAACATCAATTTTGGTGTT+TGG | - | chr3_1:73900730-73900749 | Msa0374430:intron | 30.0% |
| ! | TAGCTTTTACAAAATCACGA+TGG | - | chr3_1:73900966-73900985 | Msa0374430:intron | 30.0% |
| CGTAAATTTGATATATCGAC+AGG | - | chr3_1:73900994-73901013 | Msa0374430:intron | 30.0% | |
| ! | TAAACGTACAAGAATGGATT+TGG | + | chr3_1:73901216-73901235 | None:intergenic | 30.0% |
| TCCATTCTTGTACGTTTATA+TGG | - | chr3_1:73901218-73901237 | Msa0374430:intron | 30.0% | |
| ACCATATAAACGTACAAGAA+TGG | + | chr3_1:73901222-73901241 | None:intergenic | 30.0% | |
| AATAGAATAAGGGTAGTTGT+GGG | - | chr3_1:73901327-73901346 | Msa0374430:intron | 30.0% | |
| ! | TTTCTATATAATTTTGGGCC+TGG | - | chr3_1:73901373-73901392 | Msa0374430:intron | 30.0% |
| ! | TTCTATATAATTTTGGGCCT+GGG | - | chr3_1:73901374-73901393 | Msa0374430:intron | 30.0% |
| TCTACTCAATTATTCTCACA+TGG | - | chr3_1:73901635-73901654 | Msa0374430:intron | 30.0% | |
| !! | AAGGCTTTTAATTAGATCTG+AGG | + | chr3_1:73901677-73901696 | None:intergenic | 30.0% |
| TTACGATAAACACTGAACAT+TGG | + | chr3_1:73901760-73901779 | None:intergenic | 30.0% | |
| AATGTTCAGTGTTTATCGTA+AGG | - | chr3_1:73901759-73901778 | Msa0374430:intron | 30.0% | |
| AAGTTGTCTTTGTCTTCTAT+CGG | - | chr3_1:73901809-73901828 | Msa0374430:intron | 30.0% | |
| TTTCAATGACTAGTGTTCTT+AGG | - | chr3_1:73902112-73902131 | Msa0374430:intron | 30.0% | |
| ! | GTTGATTCTCCTTCTAAAAA+AGG | - | chr3_1:73902204-73902223 | Msa0374430:intron | 30.0% |
| !!! | CGACGTTCATTTTAAAACAA+AGG | - | chr3_1:73902399-73902418 | Msa0374430:intron | 30.0% |
| CCAAAATTTCTAAGCATCAT+CGG | + | chr3_1:73902435-73902454 | None:intergenic | 30.0% | |
| !!! | CGACGTTCATTTTAAAACAA+AGG | - | chr3_1:73902399-73902418 | Msa0374430:intron | 30.0% |
| GCTTCTTATCCAAAATTTCA+AGG | + | chr3_1:73902771-73902790 | None:intergenic | 30.0% | |
| GTTACTTATCCAAGAACATT+TGG | - | chr3_1:73902986-73903005 | Msa0374430:CDS | 30.0% | |
| !! | TTTTTAAAAAGCTGGCGTTA+AGG | + | chr3_1:73903178-73903197 | None:intergenic | 30.0% |
| !! | TAGTCACCGTGTTTTTAAAA+TGG | - | chr3_1:73903276-73903295 | Msa0374430:intron | 30.0% |
| ! | AAATTTTGCCTGTGCAATAT+TGG | - | chr3_1:73903315-73903334 | Msa0374430:intron | 30.0% |
| ! | TTTTTCATCCAATATTGCAC+AGG | + | chr3_1:73903326-73903345 | None:intergenic | 30.0% |
| ! | AAATGCTAAGTTAAAGGCAT+AGG | + | chr3_1:73903409-73903428 | None:intergenic | 30.0% |
| !!! | CATTTTTTATCTGTCATCAC+AGG | - | chr3_1:73903424-73903443 | Msa0374430:intron | 30.0% |
| ! | GAGAAGTATAAAAGACAATG+AGG | + | chr3_1:73903770-73903789 | None:intergenic | 30.0% |
| TAGAGACAAATAGTTAGTTG+GGG | + | chr3_1:73903841-73903860 | None:intergenic | 30.0% | |
| GTGTCTGTAACTTCATTTAA+TGG | - | chr3_1:73903876-73903895 | Msa0374430:intron | 30.0% | |
| TCTGTAACTTCATTTAATGG+AGG | - | chr3_1:73903879-73903898 | Msa0374430:intron | 30.0% | |
| ATTTCTAATGTGAGTGCAAA+TGG | - | chr3_1:73904053-73904072 | Msa0374430:intron | 30.0% | |
| ! | TTTTCACATGCTCATACATT+TGG | + | chr3_1:73904222-73904241 | None:intergenic | 30.0% |
| ! | AGATTATTCTTTTTACTCCC+AGG | - | chr3_1:73904306-73904325 | Msa0374430:CDS | 30.0% |
| TCTTCATCAATCATGAAATG+TGG | + | chr3_1:73904403-73904422 | None:intergenic | 30.0% | |
| ACAAATAAACAGAGAACATG+AGG | + | chr3_1:73904551-73904570 | None:intergenic | 30.0% | |
| ! | TTATTTGTTGCTTGAGGTTA+AGG | - | chr3_1:73904563-73904582 | Msa0374430:five_prime_UTR | 30.0% |
| ! | AAAATATGTTCAGTTTCTGG+AGG | - | chr3_1:73904672-73904691 | Msa0374430:five_prime_UTR | 30.0% |
| GAAGGTGAGATAGAAAAAGA+AGG | + | chr3_1:73896408-73896427 | None:intergenic | 35.0% | |
| AAGGATGAGAGATATGAAGA+AGG | + | chr3_1:73896426-73896445 | None:intergenic | 35.0% | |
| TTCATCAACCGTTACAATTC+TGG | - | chr3_1:73896549-73896568 | Msa0374430:three_prime_UTR | 35.0% | |
| !! | TACAATTCTGGAACAGTTTG+CGG | - | chr3_1:73896561-73896580 | Msa0374430:exon | 35.0% |
| AAGGAAGATCCATGAAAATC+CGG | - | chr3_1:73896810-73896829 | Msa0374430:CDS | 35.0% | |
| ATTTCCTCAAAAGCTAACTC+CGG | + | chr3_1:73896832-73896851 | None:intergenic | 35.0% | |
| TCGTTTGATAAGAAAGGAGT+TGG | - | chr3_1:73896861-73896880 | Msa0374430:CDS | 35.0% | |
| ! | ATTATAGAAGTGCAATCACC+TGG | + | chr3_1:73897002-73897021 | None:intergenic | 35.0% |
| GCATTGTTTGGATTCATTGT+AGG | - | chr3_1:73898019-73898038 | Msa0374430:intron | 35.0% | |
| TTGTTTGGATTCATTGTAGG+AGG | - | chr3_1:73898022-73898041 | Msa0374430:intron | 35.0% | |
| TGTTTGGATTCATTGTAGGA+GGG | - | chr3_1:73898023-73898042 | Msa0374430:intron | 35.0% | |
| AACTACATGTGCGTCAATAA+GGG | + | chr3_1:73898188-73898207 | None:intergenic | 35.0% | |
| AAACTACATGTGCGTCAATA+AGG | + | chr3_1:73898189-73898208 | None:intergenic | 35.0% | |
| TTGACAAGCTATATAGTCCA+AGG | + | chr3_1:73898257-73898276 | None:intergenic | 35.0% | |
| ! | GAATGGATATGGACTAAAGA+AGG | + | chr3_1:73898812-73898831 | None:intergenic | 35.0% |
| ! | TACGTGAACGTCTTTAAGAA+TGG | + | chr3_1:73898829-73898848 | None:intergenic | 35.0% |
| CATACATTGGTCCAAACTAA+AGG | + | chr3_1:73898866-73898885 | None:intergenic | 35.0% | |
| ! | GTTTGGACCAATGTATGTTT+TGG | - | chr3_1:73898869-73898888 | Msa0374430:intron | 35.0% |
| AGTTGGACCAAAACATACAT+TGG | + | chr3_1:73898879-73898898 | None:intergenic | 35.0% | |
| GTCATTTAAGTGGTCTAAGT+TGG | + | chr3_1:73898896-73898915 | None:intergenic | 35.0% | |
| GCAATATCAGGTCATTTAAG+TGG | + | chr3_1:73898906-73898925 | None:intergenic | 35.0% | |
| CTTAAATGACCTGATATTGC+AGG | - | chr3_1:73898906-73898925 | Msa0374430:intron | 35.0% | |
| TGAACAAAACCTGCAATATC+AGG | + | chr3_1:73898918-73898937 | None:intergenic | 35.0% | |
| TGTAATAGGGTGTATGGTAT+GGG | + | chr3_1:73898947-73898966 | None:intergenic | 35.0% | |
| TTGTAATAGGGTGTATGGTA+TGG | + | chr3_1:73898948-73898967 | None:intergenic | 35.0% | |
| CACCCTATTACAAGAATACA+CGG | - | chr3_1:73898955-73898974 | Msa0374430:intron | 35.0% | |
| !! | GGTTTAGATTTTGGGAAAAG+AGG | + | chr3_1:73898986-73899005 | None:intergenic | 35.0% |
| CAGTAAGAAAAAAGAGGGAA+CGG | + | chr3_1:73899007-73899026 | None:intergenic | 35.0% | |
| AACTTGGACCAGTAAAAGTT+GGG | + | chr3_1:73899747-73899766 | None:intergenic | 35.0% | |
| TAACTTGGACCAGTAAAAGT+TGG | + | chr3_1:73899748-73899767 | None:intergenic | 35.0% | |
| AGTAACAGATCTTTCATGTG+AGG | - | chr3_1:73899808-73899827 | Msa0374430:intron | 35.0% | |
| TGTTATAGGCAAAGGATATG+AGG | + | chr3_1:73899863-73899882 | None:intergenic | 35.0% | |
| CCTATAGTAGTAAGTAAGAC+AGG | + | chr3_1:73899948-73899967 | None:intergenic | 35.0% | |
| CCTGTCTTACTTACTACTAT+AGG | - | chr3_1:73899945-73899964 | Msa0374430:intron | 35.0% | |
| TCACGAATGCATTGCTAATA+AGG | + | chr3_1:73900172-73900191 | None:intergenic | 35.0% | |
| TGCATTCGTGATAGAAAGTT+TGG | - | chr3_1:73900209-73900228 | Msa0374430:intron | 35.0% | |
| !!! | ATATGATTTTTGGTGGTGGT+CGG | - | chr3_1:73900266-73900285 | Msa0374430:intron | 35.0% |
| CATAATATATGCAAGGTTCG+GGG | + | chr3_1:73900299-73900318 | None:intergenic | 35.0% | |
| GCATAATATATGCAAGGTTC+GGG | + | chr3_1:73900300-73900319 | None:intergenic | 35.0% | |
| TGAGCTTGACTCAATTGTTA+GGG | + | chr3_1:73900328-73900347 | None:intergenic | 35.0% | |
| !!! | GTTTCATGGTTTTGAGAGAA+GGG | + | chr3_1:73900715-73900734 | None:intergenic | 35.0% |
| !!! | TGTTTCATGGTTTTGAGAGA+AGG | + | chr3_1:73900716-73900735 | None:intergenic | 35.0% |
| ATGGTGATATGTCCGAATTA+CGG | - | chr3_1:73900909-73900928 | Msa0374430:intron | 35.0% | |
| TATATGGTTATTTACGGCCA+TGG | - | chr3_1:73901234-73901253 | Msa0374430:intron | 35.0% | |
| CAATAGAATAAGGGTAGTTG+TGG | - | chr3_1:73901326-73901345 | Msa0374430:intron | 35.0% | |
| GTATCATCGTCGATATATAG+GGG | + | chr3_1:73901444-73901463 | None:intergenic | 35.0% | |
| GGTATCATCGTCGATATATA+GGG | + | chr3_1:73901445-73901464 | None:intergenic | 35.0% | |
| TGGTATCATCGTCGATATAT+AGG | + | chr3_1:73901446-73901465 | None:intergenic | 35.0% | |
| ! | AATTAGATCTGAGGTCATGT+CGG | + | chr3_1:73901668-73901687 | None:intergenic | 35.0% |
| CCAAACAATCAACTGAACAA+AGG | + | chr3_1:73901696-73901715 | None:intergenic | 35.0% | |
| CCTTTGTTCAGTTGATTGTT+TGG | - | chr3_1:73901693-73901712 | Msa0374430:intron | 35.0% | |
| !! | TGGTTAGTTCTATCCCATTT+CGG | - | chr3_1:73901713-73901732 | Msa0374430:intron | 35.0% |
| CTCTTTAACCGACAAACAAT+CGG | + | chr3_1:73901861-73901880 | None:intergenic | 35.0% | |
| ! | TTTTTCTTCTTCTCTTCTCC+TGG | - | chr3_1:73901903-73901922 | Msa0374430:intron | 35.0% |
| AGTTAACACTTAACATGACC+AGG | + | chr3_1:73901924-73901943 | None:intergenic | 35.0% | |
| ! | AATGATGGAAAACACGACAA+TGG | - | chr3_1:73902269-73902288 | Msa0374430:intron | 35.0% |
| ! | CCGATGATGCTTAGAAATTT+TGG | - | chr3_1:73902432-73902451 | Msa0374430:intron | 35.0% |
| ! | TGTAACGTAGCTGCATTTTT+CGG | + | chr3_1:73903069-73903088 | None:intergenic | 35.0% |
| AGCTACGTTACATTTCTTGA+GGG | - | chr3_1:73903077-73903096 | Msa0374430:intron | 35.0% | |
| ! | AATCCAATGGATTTGATTCG+CGG | + | chr3_1:73903736-73903755 | None:intergenic | 35.0% |
| ATCAAATCCATTGGATTCAC+AGG | - | chr3_1:73903739-73903758 | Msa0374430:intron | 35.0% | |
| CAATTACCTGTTAGAGAGTT+GGG | + | chr3_1:73904111-73904130 | None:intergenic | 35.0% | |
| ACAATTACCTGTTAGAGAGT+TGG | + | chr3_1:73904112-73904131 | None:intergenic | 35.0% | |
| ! | TAGTGTTTACAGTTGCTTTG+CGG | - | chr3_1:73904141-73904160 | Msa0374430:CDS | 35.0% |
| ATTTGGTCATCATTAACCGT+GGG | + | chr3_1:73904205-73904224 | None:intergenic | 35.0% | |
| CTTCAGCTTTCTTCTACATA+GGG | - | chr3_1:73904335-73904354 | Msa0374430:CDS | 35.0% | |
| CTTTCTTCTACATAGGGATA+AGG | - | chr3_1:73904341-73904360 | Msa0374430:CDS | 35.0% | |
| GGATAAGGAATGAAACACTA+GGG | - | chr3_1:73904356-73904375 | Msa0374430:CDS | 35.0% | |
| TCAATGAACATGGTTGATCT+CGG | - | chr3_1:73904473-73904492 | Msa0374430:CDS | 35.0% | |
| AATAAACAGAGAACATGAGG+AGG | + | chr3_1:73904548-73904567 | None:intergenic | 35.0% | |
| ! | CTCTGTTTATTTGTTGCTTG+AGG | - | chr3_1:73904557-73904576 | Msa0374430:five_prime_UTR | 35.0% |
| TACAGAAGGAAATCATAACC+TGG | + | chr3_1:73904600-73904619 | None:intergenic | 35.0% | |
| GATTTCCTTCTGTAGAATGT+AGG | - | chr3_1:73904606-73904625 | Msa0374430:five_prime_UTR | 35.0% | |
| GTAGAATGTAGGCTCAAAAT+AGG | - | chr3_1:73904617-73904636 | Msa0374430:five_prime_UTR | 35.0% | |
| ATGTAGGCTCAAAATAGGAA+AGG | - | chr3_1:73904622-73904641 | Msa0374430:five_prime_UTR | 35.0% | |
| TGTAGGCTCAAAATAGGAAA+GGG | - | chr3_1:73904623-73904642 | Msa0374430:five_prime_UTR | 35.0% | |
| AACATATAGAGAGAGGGGTA+AGG | + | chr3_1:73896445-73896464 | None:intergenic | 40.0% | |
| CAAGGAACATATAGAGAGAG+GGG | + | chr3_1:73896450-73896469 | None:intergenic | 40.0% | |
| GCAAGGAACATATAGAGAGA+GGG | + | chr3_1:73896451-73896470 | None:intergenic | 40.0% | |
| AGCAAGGAACATATAGAGAG+AGG | + | chr3_1:73896452-73896471 | None:intergenic | 40.0% | |
| ! | GGAAGAAAGTACAGAAAGCA+AGG | + | chr3_1:73896468-73896487 | None:intergenic | 40.0% |
| GAATAAAACACGGTCGTAAG+CGG | + | chr3_1:73896614-73896633 | None:intergenic | 40.0% | |
| ! | AGTTTGGAACGAAGCATGTT+CGG | - | chr3_1:73896729-73896748 | Msa0374430:CDS | 40.0% |
| !! | AGTGGTTGAAAAGTGTTCGA+AGG | - | chr3_1:73896791-73896810 | Msa0374430:CDS | 40.0% |
| ! | AAGCTAACTCCGGATTTTCA+TGG | + | chr3_1:73896822-73896841 | None:intergenic | 40.0% |
| !!! | AAATCCGGAGTTAGCTTTTG+AGG | - | chr3_1:73896825-73896844 | Msa0374430:CDS | 40.0% |
| GACGAGTCGTTTGATAAGAA+AGG | - | chr3_1:73896855-73896874 | Msa0374430:CDS | 40.0% | |
| AAGAAAGGAGTTGGATCTGA+TGG | - | chr3_1:73896870-73896889 | Msa0374430:CDS | 40.0% | |
| ! | TCAGCTCTAACAGCAACAAA+AGG | + | chr3_1:73896961-73896980 | None:intergenic | 40.0% |
| ! | AGCTCTTTGCTGTGATTCTA+TGG | - | chr3_1:73897857-73897876 | Msa0374430:intron | 40.0% |
| ! | GAGTACAAGTCTAAAGTTGC+CGG | - | chr3_1:73898056-73898075 | Msa0374430:intron | 40.0% |
| !! | CTCTCGAGTTTTCAAGATCT+TGG | + | chr3_1:73898135-73898154 | None:intergenic | 40.0% |
| AGACGTTCACGTATCTTGTT+TGG | - | chr3_1:73898836-73898855 | Msa0374430:intron | 40.0% | |
| ! | GACGTTCACGTATCTTGTTT+GGG | - | chr3_1:73898837-73898856 | Msa0374430:intron | 40.0% |
| ! | ACGTTCACGTATCTTGTTTG+GGG | - | chr3_1:73898838-73898857 | Msa0374430:intron | 40.0% |
| ! | GAGGGAACGGTTTAGATTTT+GGG | + | chr3_1:73898994-73899013 | None:intergenic | 40.0% |
| ! | AGAGGGAACGGTTTAGATTT+TGG | + | chr3_1:73898995-73899014 | None:intergenic | 40.0% |
| !!! | CGTTCCCTCTTTTTTCTTAC+TGG | - | chr3_1:73899005-73899024 | Msa0374430:intron | 40.0% |
| GCCCATACAATAAAGCCTAT+TGG | - | chr3_1:73899049-73899068 | Msa0374430:intron | 40.0% | |
| ATATGAGATGGAAAATGCGG+CGG | + | chr3_1:73899198-73899217 | None:intergenic | 40.0% | |
| GCCATATGAGATGGAAAATG+CGG | + | chr3_1:73899201-73899220 | None:intergenic | 40.0% | |
| GAAATTGAAGTTGCGAAGAG+AGG | - | chr3_1:73899499-73899518 | Msa0374430:intron | 40.0% | |
| TAGTCGAGTAGCTGATGAAT+AGG | + | chr3_1:73899656-73899675 | None:intergenic | 40.0% | |
| ACTTGGACCAGTAAAAGTTG+GGG | + | chr3_1:73899746-73899765 | None:intergenic | 40.0% | |
| ! | TCATCACTTAACAGTGGGTT+AGG | - | chr3_1:73899886-73899905 | Msa0374430:intron | 40.0% |
| TACTATAGGACAAACGGCAA+AGG | - | chr3_1:73899959-73899978 | Msa0374430:intron | 40.0% | |
| CATAATATATGCAAGGTCCG+AGG | + | chr3_1:73900104-73900123 | None:intergenic | 40.0% | |
| !!! | TATGATTTTTGGTGGTGGTC+GGG | - | chr3_1:73900267-73900286 | Msa0374430:intron | 40.0% |
| GTGAGCTTGACTCAATTGTT+AGG | + | chr3_1:73900329-73900348 | None:intergenic | 40.0% | |
| ! | TCTAATTACTCCCCTTTTGG+AGG | - | chr3_1:73900590-73900609 | Msa0374430:intron | 40.0% |
| TAAGGGGGATTACCGTAATT+CGG | + | chr3_1:73900924-73900943 | None:intergenic | 40.0% | |
| ATTTGATATATCGACAGGGG+CGG | - | chr3_1:73900999-73901018 | Msa0374430:intron | 40.0% | |
| AATTGAGCACACATCTTCCA+TGG | + | chr3_1:73901254-73901273 | None:intergenic | 40.0% | |
| AGCAAGTAGCATGAGAAGAA+AGG | - | chr3_1:73901294-73901313 | Msa0374430:intron | 40.0% | |
| AAGTAGCATGAGAAGAAAGG+AGG | - | chr3_1:73901297-73901316 | Msa0374430:intron | 40.0% | |
| AGGAGGTGGCAATAGAATAA+GGG | - | chr3_1:73901317-73901336 | Msa0374430:intron | 40.0% | |
| !! | GGTTAGTTCTATCCCATTTC+GGG | - | chr3_1:73901714-73901733 | Msa0374430:intron | 40.0% |
| GAACAAGTTCTTCCCGAAAT+GGG | + | chr3_1:73901729-73901748 | None:intergenic | 40.0% | |
| AGAACAAGTTCTTCCCGAAA+TGG | + | chr3_1:73901730-73901749 | None:intergenic | 40.0% | |
| TGGAAAACACGACAATGGTT+AGG | - | chr3_1:73902274-73902293 | Msa0374430:intron | 40.0% | |
| CCAAAATTTCAAGGCAACGT+CGG | + | chr3_1:73902762-73902781 | None:intergenic | 40.0% | |
| CCATCTCATCCAAATGTTCT+TGG | + | chr3_1:73902998-73903017 | None:intergenic | 40.0% | |
| CCAAGAACATTTGGATGAGA+TGG | - | chr3_1:73902995-73903014 | Msa0374430:CDS | 40.0% | |
| ! | GTAACGTAGCTGCATTTTTC+GGG | + | chr3_1:73903068-73903087 | None:intergenic | 40.0% |
| CAGCTACGTTACATTTCTTG+AGG | - | chr3_1:73903076-73903095 | Msa0374430:intron | 40.0% | |
| ATTGCACAGGCAAAATTTGC+AGG | + | chr3_1:73903313-73903332 | None:intergenic | 40.0% | |
| GCAAAGCGAATGATACAAGA+CGG | - | chr3_1:73903494-73903513 | Msa0374430:intron | 40.0% | |
| AATGATACAAGACGGTGCTT+TGG | - | chr3_1:73903502-73903521 | Msa0374430:intron | 40.0% | |
| TTGACCCAATTATACCAGTC+GGG | + | chr3_1:73903571-73903590 | None:intergenic | 40.0% | |
| CTTGACCCAATTATACCAGT+CGG | + | chr3_1:73903572-73903591 | None:intergenic | 40.0% | |
| !! | TTTTTCAGAGCCGTGATTAG+TGG | - | chr3_1:73903620-73903639 | Msa0374430:intron | 40.0% |
| ! | TTTTCAGAGCCGTGATTAGT+GGG | - | chr3_1:73903621-73903640 | Msa0374430:intron | 40.0% |
| ! | TAACTCTGCTGATCCTGTTT+TGG | - | chr3_1:73903670-73903689 | Msa0374430:intron | 40.0% |
| ! | ATCCAATGGATTTGATTCGC+GGG | + | chr3_1:73903735-73903754 | None:intergenic | 40.0% |
| ! | GCTGATCCTGTATTCTTTTG+TGG | - | chr3_1:73903798-73903817 | Msa0374430:intron | 40.0% |
| GCAAGACCACAAAAGAATAC+AGG | + | chr3_1:73903807-73903826 | None:intergenic | 40.0% | |
| GACAAATAGTTAGTTGGGGA+AGG | + | chr3_1:73903837-73903856 | None:intergenic | 40.0% | |
| TTCTAGCAGCTGGTAAAAAC+TGG | + | chr3_1:73903970-73903989 | None:intergenic | 40.0% | |
| CTAGAAAGAATAGAGCAGGT+TGG | - | chr3_1:73903984-73904003 | Msa0374430:intron | 40.0% | |
| TAGAGAGTTGGGACAATAGT+AGG | + | chr3_1:73904100-73904119 | None:intergenic | 40.0% | |
| TATTGTCCCAACTCTCTAAC+AGG | - | chr3_1:73904102-73904121 | Msa0374430:CDS | 40.0% | |
| CTAACAGGTAATTGTGCAAC+AGG | - | chr3_1:73904117-73904136 | Msa0374430:CDS | 40.0% | |
| ! | GGAAGTTGACTTCTTTGAGA+AGG | - | chr3_1:73904162-73904181 | Msa0374430:CDS | 40.0% |
| CATTTGGTCATCATTAACCG+TGG | + | chr3_1:73904206-73904225 | None:intergenic | 40.0% | |
| !! | AAAAGTGTCCATCGATTTGC+TGG | - | chr3_1:73904240-73904259 | Msa0374430:CDS | 40.0% |
| !! | AAAGTGTCCATCGATTTGCT+GGG | - | chr3_1:73904241-73904260 | Msa0374430:CDS | 40.0% |
| TGCTGGGTCAAAAGAATTTC+AGG | - | chr3_1:73904257-73904276 | Msa0374430:CDS | 40.0% | |
| GCTGGGTCAAAAGAATTTCA+GGG | - | chr3_1:73904258-73904277 | Msa0374430:CDS | 40.0% | |
| TAATCTTCAGCACCCATCAT+AGG | + | chr3_1:73904292-73904311 | None:intergenic | 40.0% | |
| CCTATGTAGAAGAAAGCTGA+AGG | + | chr3_1:73904337-73904356 | None:intergenic | 40.0% | |
| CCTTCAGCTTTCTTCTACAT+AGG | - | chr3_1:73904334-73904353 | Msa0374430:CDS | 40.0% | |
| GGGATAAGGAATGAAACACT+AGG | - | chr3_1:73904355-73904374 | Msa0374430:CDS | 40.0% | |
| GATGAAGATGCTCTACCAAT+AGG | - | chr3_1:73904415-73904434 | Msa0374430:CDS | 40.0% | |
| GAGATCAACCATGTTCATTG+AGG | + | chr3_1:73904474-73904493 | None:intergenic | 40.0% | |
| ! | TGTTGCTTGAGGTTAAGGAA+CGG | - | chr3_1:73904568-73904587 | Msa0374430:five_prime_UTR | 40.0% |
| TTGAGCCTACATTCTACAGA+AGG | + | chr3_1:73904614-73904633 | None:intergenic | 40.0% | |
| CTCAAAATAGGAAAGGGAAG+AGG | - | chr3_1:73904629-73904648 | Msa0374430:five_prime_UTR | 40.0% | |
| AAATAGGAAAGGGAAGAGGT+TGG | - | chr3_1:73904633-73904652 | Msa0374430:five_prime_UTR | 40.0% | |
| AATAGGAAAGGGAAGAGGTT+GGG | - | chr3_1:73904634-73904653 | Msa0374430:five_prime_UTR | 40.0% | |
| GGAAAAGTCAATCTTACACC+AGG | + | chr3_1:73904748-73904767 | None:intergenic | 40.0% | |
| AAGGAGAATTCGAACACGTG+CGG | + | chr3_1:73896382-73896401 | None:intergenic | 45.0% | |
| !! | ACCGTGTTTTATTCTCCGAC+CGG | - | chr3_1:73896620-73896639 | Msa0374430:CDS | 45.0% |
| TCCGGTCGGAGAATAAAACA+CGG | + | chr3_1:73896624-73896643 | None:intergenic | 45.0% | |
| TCTCTTTATCGCAGCATCTC+CGG | + | chr3_1:73896642-73896661 | None:intergenic | 45.0% | |
| ! | TTCCGTGTCACGTTTTTGCA+CGG | + | chr3_1:73896685-73896704 | None:intergenic | 45.0% |
| GCTCTAACAGCAACAAAAGG+CGG | + | chr3_1:73896958-73896977 | None:intergenic | 45.0% | |
| ! | TGTTGCTGTTAGAGCTGACA+TGG | - | chr3_1:73896963-73896982 | Msa0374430:intron | 45.0% |
| ! | AGAAGTGCAATCACCTGGAT+GGG | + | chr3_1:73896997-73897016 | None:intergenic | 45.0% |
| ! | TAGAAGTGCAATCACCTGGA+TGG | + | chr3_1:73896998-73897017 | None:intergenic | 45.0% |
| AGTACTCGTAGAGTGGATAG+TGG | + | chr3_1:73897028-73897047 | None:intergenic | 45.0% | |
| TGTGCGTCAATAAGGGATGA+AGG | + | chr3_1:73898181-73898200 | None:intergenic | 45.0% | |
| ! | TGTTTGGGGTCCCTTTAGTT+TGG | - | chr3_1:73898852-73898871 | Msa0374430:intron | 45.0% |
| GAGTAGGTTCAGCTACCAAT+AGG | + | chr3_1:73899067-73899086 | None:intergenic | 45.0% | |
| TCTATGTGGAGAGAGAGAGT+AGG | + | chr3_1:73899083-73899102 | None:intergenic | 45.0% | |
| GCGCATGTGTATGTTCTATG+TGG | + | chr3_1:73899097-73899116 | None:intergenic | 45.0% | |
| ! | GCCGCATTTTCCATCTCATA+TGG | - | chr3_1:73899197-73899216 | Msa0374430:intron | 45.0% |
| AGTTACACGGCCATATGAGA+TGG | + | chr3_1:73899210-73899229 | None:intergenic | 45.0% | |
| ! | CACCGTTTTCTCTCCTTTTC+CGG | - | chr3_1:73899311-73899330 | Msa0374430:intron | 45.0% |
| ATTTCTTGATACGCGGCCAA+CGG | + | chr3_1:73899340-73899359 | None:intergenic | 45.0% | |
| ! | ATTTTCGACACAGTGGTCGT+CGG | + | chr3_1:73899438-73899457 | None:intergenic | 45.0% |
| ! | GGAGACAATTTTCGACACAG+TGG | + | chr3_1:73899445-73899464 | None:intergenic | 45.0% |
| !! | TGGCGAAGTTGTTTTCAGCA+CGG | + | chr3_1:73899469-73899488 | None:intergenic | 45.0% |
| TGTGCGATCAGTCTCACATT+AGG | - | chr3_1:73899615-73899634 | Msa0374430:intron | 45.0% | |
| GATCAGTCTCACATTAGGCT+TGG | - | chr3_1:73899620-73899639 | Msa0374430:intron | 45.0% | |
| ! | AGTTGGACCCCAACTTTTAC+TGG | - | chr3_1:73899736-73899755 | Msa0374430:intron | 45.0% |
| TTGAGTCAAGCTCACGATGA+CGG | - | chr3_1:73900334-73900353 | Msa0374430:intron | 45.0% | |
| TCAATGGCTCTCCTCCAAAA+GGG | + | chr3_1:73900604-73900623 | None:intergenic | 45.0% | |
| ATTGCCACATGGTCTAACGA+GGG | + | chr3_1:73900790-73900809 | None:intergenic | 45.0% | |
| AATTGCCACATGGTCTAACG+AGG | + | chr3_1:73900791-73900810 | None:intergenic | 45.0% | |
| GATACGACACAATTGCCACA+TGG | + | chr3_1:73900801-73900820 | None:intergenic | 45.0% | |
| ACCTGGACTCTCAATATCAC+TGG | - | chr3_1:73901022-73901041 | Msa0374430:intron | 45.0% | |
| CCTGGACTCTCAATATCACT+GGG | - | chr3_1:73901023-73901042 | Msa0374430:intron | 45.0% | |
| CTGGACTCTCAATATCACTG+GGG | - | chr3_1:73901024-73901043 | Msa0374430:intron | 45.0% | |
| !! | CTTCTCATGCTACTTGCTGT+TGG | + | chr3_1:73901292-73901311 | None:intergenic | 45.0% |
| TAGCATGAGAAGAAAGGAGG+AGG | - | chr3_1:73901300-73901319 | Msa0374430:intron | 45.0% | |
| GAGGAGGTGGCAATAGAATA+AGG | - | chr3_1:73901316-73901335 | Msa0374430:intron | 45.0% | |
| ! | ATATAATTTTGGGCCTGGGC+TGG | - | chr3_1:73901378-73901397 | Msa0374430:intron | 45.0% |
| TCATCGTCGATATATAGGGG+CGG | + | chr3_1:73901441-73901460 | None:intergenic | 45.0% | |
| AGCGATTGAATCTCGTGCAT+GGG | + | chr3_1:73901835-73901854 | None:intergenic | 45.0% | |
| ! | TCGCTCTACCGATTGTTTGT+CGG | - | chr3_1:73901850-73901869 | Msa0374430:intron | 45.0% |
| ! | CCGACGTTGCCTTGAAATTT+TGG | - | chr3_1:73902759-73902778 | Msa0374430:intron | 45.0% |
| !! | CATAGGTTGTAGCCTTGTAG+GGG | + | chr3_1:73903392-73903411 | None:intergenic | 45.0% |
| !! | GCATAGGTTGTAGCCTTGTA+GGG | + | chr3_1:73903393-73903412 | None:intergenic | 45.0% |
| AGCACCCGACTGGTATAATT+GGG | - | chr3_1:73903564-73903583 | Msa0374430:intron | 45.0% | |
| GGTATAATTGGGTCAAGACC+TGG | - | chr3_1:73903575-73903594 | Msa0374430:intron | 45.0% | |
| AATCCACATCCAGCCAACAA+GGG | + | chr3_1:73903602-73903621 | None:intergenic | 45.0% | |
| AAATCCACATCCAGCCAACA+AGG | + | chr3_1:73903603-73903622 | None:intergenic | 45.0% | |
| ! | GGCTCTTTTCCCACTAATCA+CGG | + | chr3_1:73903633-73903652 | None:intergenic | 45.0% |
| AGCTGCAGTTATCAGCATAC+AGG | - | chr3_1:73903700-73903719 | Msa0374430:intron | 45.0% | |
| GCTGCAGTTATCAGCATACA+GGG | - | chr3_1:73903701-73903720 | Msa0374430:intron | 45.0% | |
| GGCAAAACCTGTGAATCCAA+TGG | + | chr3_1:73903749-73903768 | None:intergenic | 45.0% | |
| TGACATGATACCAGACTCAG+TGG | - | chr3_1:73903911-73903930 | Msa0374430:intron | 45.0% | |
| ATACCAGACTCAGTGGTCAT+TGG | - | chr3_1:73903918-73903937 | Msa0374430:intron | 45.0% | |
| GGTGTTAGAAAACGCTCTGA+AGG | + | chr3_1:73903949-73903968 | None:intergenic | 45.0% | |
| ! | GCTCTATTCTTTCTAGCAGC+TGG | + | chr3_1:73903980-73903999 | None:intergenic | 45.0% |
| GCTGCTAGAAAGAATAGAGC+AGG | - | chr3_1:73903980-73903999 | Msa0374430:intron | 45.0% | |
| ! | AATAGAGCAGGTTGGCAACT+TGG | - | chr3_1:73903992-73904011 | Msa0374430:intron | 45.0% |
| GTACACTATTTACCCTCCCA+CGG | - | chr3_1:73904186-73904205 | Msa0374430:CDS | 45.0% | |
| ! | CTTTTGACCCAGCAAATCGA+TGG | + | chr3_1:73904251-73904270 | None:intergenic | 45.0% |
| GAAAGCTGAAGGAATGACCT+GGG | + | chr3_1:73904326-73904345 | None:intergenic | 45.0% | |
| AGAAAGCTGAAGGAATGACC+TGG | + | chr3_1:73904327-73904346 | None:intergenic | 45.0% | |
| ! | ATTGAGGTACCTCTCTGCAA+TGG | + | chr3_1:73904458-73904477 | None:intergenic | 45.0% |
| !! | GAGAGGTACCTCAATGAACA+TGG | - | chr3_1:73904463-73904482 | Msa0374430:CDS | 45.0% |
| TTGTACAGGTGGAAAGGACA+TGG | + | chr3_1:73904502-73904521 | None:intergenic | 45.0% | |
| CCTTTCCACCTGTACAAAAC+CGG | - | chr3_1:73904505-73904524 | Msa0374430:CDS | 45.0% | |
| AACAGAGAACATGAGGAGGA+CGG | + | chr3_1:73904544-73904563 | None:intergenic | 45.0% | |
| GTTAAGGAACGGTAGAAACC+AGG | - | chr3_1:73904579-73904598 | Msa0374430:five_prime_UTR | 45.0% | |
| ATAGGAAAGGGAAGAGGTTG+GGG | - | chr3_1:73904635-73904654 | Msa0374430:five_prime_UTR | 45.0% | |
| !! | ATTAATTAATATTATATCAA+AGG | - | chr3_1:73899694-73899713 | Msa0374430:intron | 5.0% |
| !!! | TAGTATTTTTTTTTATAAAA+TGG | - | chr3_1:73900238-73900257 | Msa0374430:intron | 5.0% |
| !!! | GTTTTTTTTTTATTTTTTTA+AGG | - | chr3_1:73902826-73902845 | Msa0374430:intron | 5.0% |
| !!! | AGCGGCGGAAGGTATTTTCA+CGG | + | chr3_1:73896596-73896615 | None:intergenic | 50.0% |
| TAAAACACGGTCGTAAGCGG+CGG | + | chr3_1:73896611-73896630 | None:intergenic | 50.0% | |
| TTTATCGCAGCATCTCCGGT+CGG | + | chr3_1:73896638-73896657 | None:intergenic | 50.0% | |
| CACCGTGCAAAAACGTGACA+CGG | - | chr3_1:73896680-73896699 | Msa0374430:CDS | 50.0% | |
| GTGCAAAAACGTGACACGGA+AGG | - | chr3_1:73896684-73896703 | Msa0374430:CDS | 50.0% | |
| CGGTGACAAACTGCGAAGTT+TGG | - | chr3_1:73896713-73896732 | Msa0374430:CDS | 50.0% | |
| GAACGAAGCATGTTCGGAAG+CGG | - | chr3_1:73896735-73896754 | Msa0374430:CDS | 50.0% | |
| GTTAAGCGTAGCACAGTTGC+CGG | - | chr3_1:73896759-73896778 | Msa0374430:CDS | 50.0% | |
| TATTCGTGCCTGGATCGGTA+CGG | - | chr3_1:73896927-73896946 | Msa0374430:intron | 50.0% | |
| GGATTCATTGTAGGAGGGTG+TGG | - | chr3_1:73898028-73898047 | Msa0374430:intron | 50.0% | |
| ! | ATTGTAGGAGGGTGTGGAGT+GGG | - | chr3_1:73898034-73898053 | Msa0374430:intron | 50.0% |
| GCACATGTGGCGATGCTTAT+TGG | - | chr3_1:73898104-73898123 | Msa0374430:intron | 50.0% | |
| GTGGTGGTTTGAAGGGAAAG+AGG | + | chr3_1:73899149-73899168 | None:intergenic | 50.0% | |
| AAAGGAGAGAAAACGGTGGC+CGG | + | chr3_1:73899309-73899328 | None:intergenic | 50.0% | |
| CGGAAAAGGAGAGAAAACGG+TGG | + | chr3_1:73899313-73899332 | None:intergenic | 50.0% | |
| GGCCGGAAAAGGAGAGAAAA+CGG | + | chr3_1:73899316-73899335 | None:intergenic | 50.0% | |
| !! | CGAAGTTGTTTTCAGCACGG+CGG | + | chr3_1:73899466-73899485 | None:intergenic | 50.0% |
| GAAGTTGCGAAGAGAGGTTC+TGG | - | chr3_1:73899505-73899524 | Msa0374430:intron | 50.0% | |
| CAATGGCTCTCCTCCAAAAG+GGG | + | chr3_1:73900603-73900622 | None:intergenic | 50.0% | |
| CTCAATGGCTCTCCTCCAAA+AGG | + | chr3_1:73900605-73900624 | None:intergenic | 50.0% | |
| TTGCCACATGGTCTAACGAG+GGG | + | chr3_1:73900789-73900808 | None:intergenic | 50.0% | |
| CCCAGTGATATTGAGAGTCC+AGG | + | chr3_1:73901026-73901045 | None:intergenic | 50.0% | |
| CATGAGAAGAAAGGAGGAGG+TGG | - | chr3_1:73901303-73901322 | Msa0374430:intron | 50.0% | |
| TCGATATATAGGGGCGGATC+TGG | + | chr3_1:73901435-73901454 | None:intergenic | 50.0% | |
| GAGCGATTGAATCTCGTGCA+TGG | + | chr3_1:73901836-73901855 | None:intergenic | 50.0% | |
| !! | GTTGTAGCCTTGTAGGGGAT+CGG | + | chr3_1:73903387-73903406 | None:intergenic | 50.0% |
| !! | GGCATAGGTTGTAGCCTTGT+AGG | + | chr3_1:73903394-73903413 | None:intergenic | 50.0% |
| CCATTACCAGCTTCTTCTGC+TGG | + | chr3_1:73903473-73903492 | None:intergenic | 50.0% | |
| CCAGCAGAAGAAGCTGGTAA+TGG | - | chr3_1:73903470-73903489 | Msa0374430:intron | 50.0% | |
| GATACAAGACGGTGCTTTGG+AGG | - | chr3_1:73903505-73903524 | Msa0374430:intron | 50.0% | |
| TATACCAGTCGGGTGCTCAT+GGG | + | chr3_1:73903561-73903580 | None:intergenic | 50.0% | |
| TTATACCAGTCGGGTGCTCA+TGG | + | chr3_1:73903562-73903581 | None:intergenic | 50.0% | |
| GAGCACCCGACTGGTATAAT+TGG | - | chr3_1:73903563-73903582 | Msa0374430:intron | 50.0% | |
| AGCAGAGTTACGAGGGTTTG+CGG | + | chr3_1:73903660-73903679 | None:intergenic | 50.0% | |
| CAGGATCAGCAGAGTTACGA+GGG | + | chr3_1:73903667-73903686 | None:intergenic | 50.0% | |
| ACAGGATCAGCAGAGTTACG+AGG | + | chr3_1:73903668-73903687 | None:intergenic | 50.0% | |
| CTCCCGCGAATCAAATCCAT+TGG | - | chr3_1:73903730-73903749 | Msa0374430:intron | 50.0% | |
| CAGACTCAGTGGTCATTGGT+GGG | - | chr3_1:73903922-73903941 | Msa0374430:intron | 50.0% | |
| GGTCATCATTAACCGTGGGA+GGG | + | chr3_1:73904201-73904220 | None:intergenic | 50.0% | |
| TGGTCATCATTAACCGTGGG+AGG | + | chr3_1:73904202-73904221 | None:intergenic | 50.0% | |
| AGGGTAGTCCCACCTATGAT+GGG | - | chr3_1:73904277-73904296 | Msa0374430:CDS | 50.0% | |
| CTTCAGCACCCATCATAGGT+GGG | + | chr3_1:73904288-73904307 | None:intergenic | 50.0% | |
| TCTTCAGCACCCATCATAGG+TGG | + | chr3_1:73904289-73904308 | None:intergenic | 50.0% | |
| ACACTAGGGTCTACTCACAC+AGG | - | chr3_1:73904370-73904389 | Msa0374430:CDS | 50.0% | |
| GCATGAACAGCAGCTCCTAT+TGG | + | chr3_1:73904433-73904452 | None:intergenic | 50.0% | |
| TTCATGCCACCATTGCAGAG+AGG | - | chr3_1:73904446-73904465 | Msa0374430:CDS | 50.0% | |
| !! | CCGGTTTTGTACAGGTGGAA+AGG | + | chr3_1:73904508-73904527 | None:intergenic | 50.0% |
| !!! | GGCGGAAGGTATTTTCACGG+CGG | + | chr3_1:73896593-73896612 | None:intergenic | 55.0% |
| CGTGACACGGAAGGCTAAGA+CGG | - | chr3_1:73896693-73896712 | Msa0374430:CDS | 55.0% | |
| TTCAACCACTCCACCGTCTC+CGG | + | chr3_1:73896781-73896800 | None:intergenic | 55.0% | |
| !!! | GAATACCGGTTTTCGCGAGC+GGG | + | chr3_1:73896912-73896931 | None:intergenic | 55.0% |
| !!! | CGAATACCGGTTTTCGCGAG+CGG | + | chr3_1:73896913-73896932 | None:intergenic | 55.0% |
| CGAAAACCGGTATTCGTGCC+TGG | - | chr3_1:73896917-73896936 | Msa0374430:CDS | 55.0% | |
| ACCGGTATTCGTGCCTGGAT+CGG | - | chr3_1:73896922-73896941 | Msa0374430:intron | 55.0% | |
| ACCGATCCAGGCACGAATAC+CGG | + | chr3_1:73896926-73896945 | None:intergenic | 55.0% | |
| ATTCGTGCCTGGATCGGTAC+GGG | - | chr3_1:73896928-73896947 | Msa0374430:intron | 55.0% | |
| CATGGATGCACTTCCCATCC+AGG | - | chr3_1:73896981-73897000 | Msa0374430:intron | 55.0% | |
| ! | CATTGTAGGAGGGTGTGGAG+TGG | - | chr3_1:73898033-73898052 | Msa0374430:intron | 55.0% |
| ! | CCCACAAGCGTGCATTTTGC+CGG | + | chr3_1:73898078-73898097 | None:intergenic | 55.0% |
| CCGGCAAAATGCACGCTTGT+GGG | - | chr3_1:73898075-73898094 | Msa0374430:intron | 55.0% | |
| GGTGGATGCCGTCAATGAAC+CGG | + | chr3_1:73899177-73899196 | None:intergenic | 55.0% | |
| TGAGATGGAAAATGCGGCGG+TGG | + | chr3_1:73899195-73899214 | None:intergenic | 55.0% | |
| AGTGGCTGGGGTTTGAACCT+CGG | - | chr3_1:73900084-73900103 | Msa0374430:intron | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | + | chr3_1:73900138-73900157 | None:intergenic | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | - | chr3_1:73900135-73900154 | Msa0374430:intron | 55.0% | |
| GAACCCCTCGTTAGACCATG+TGG | - | chr3_1:73900783-73900802 | Msa0374430:intron | 55.0% | |
| TTCACAGCCGATCCCCTACA+AGG | - | chr3_1:73903377-73903396 | Msa0374430:intron | 55.0% | |
| TTCCAGCCAGCAGAAGAAGC+TGG | - | chr3_1:73903464-73903483 | Msa0374430:intron | 55.0% | |
| TACCAGCTTCTTCTGCTGGC+TGG | + | chr3_1:73903469-73903488 | None:intergenic | 55.0% | |
| !! | AGACGGTGCTTTGGAGGATG+TGG | - | chr3_1:73903511-73903530 | Msa0374430:intron | 55.0% |
| GTCAAGACCTGGACCCTTGT+TGG | - | chr3_1:73903586-73903605 | Msa0374430:intron | 55.0% | |
| GCAGCTGAAGCTGCCAAAAC+AGG | + | chr3_1:73903686-73903705 | None:intergenic | 55.0% | |
| CCACCAATGACCACTGAGTC+TGG | + | chr3_1:73903924-73903943 | None:intergenic | 55.0% | |
| CCAGACTCAGTGGTCATTGG+TGG | - | chr3_1:73903921-73903940 | Msa0374430:intron | 55.0% | |
| CAGGGTAGTCCCACCTATGA+TGG | - | chr3_1:73904276-73904295 | Msa0374430:CDS | 55.0% | |
| ! | GAGGTACCTCTCTGCAATGG+TGG | + | chr3_1:73904455-73904474 | None:intergenic | 55.0% |
| !!! | GCGTACCGGTTTTGTACAGG+TGG | + | chr3_1:73904513-73904532 | None:intergenic | 55.0% |
| CCTGTACAAAACCGGTACGC+CGG | - | chr3_1:73904513-73904532 | Msa0374430:CDS | 55.0% | |
| CATGAGGAGGACGGATACAC+CGG | + | chr3_1:73904535-73904554 | None:intergenic | 55.0% | |
| CGTAGCACAGTTGCCGGAGA+CGG | - | chr3_1:73896765-73896784 | Msa0374430:CDS | 60.0% | |
| CGTTACCCGCTCGCGAAAAC+CGG | - | chr3_1:73896904-73896923 | Msa0374430:CDS | 60.0% | |
| GCCGGCAAAATGCACGCTTG+TGG | - | chr3_1:73898074-73898093 | Msa0374430:intron | 60.0% | |
| TTGTGGGCACGACGCACATG+TGG | - | chr3_1:73898091-73898110 | Msa0374430:intron | 60.0% | |
| GGATGCCGTCAATGAACCGG+CGG | + | chr3_1:73899174-73899193 | None:intergenic | 60.0% | |
| ! | TCTCCTTTTCCGGCCACCGT+TGG | - | chr3_1:73899321-73899340 | Msa0374430:intron | 60.0% |
| TCTTGATACGCGGCCAACGG+TGG | + | chr3_1:73899337-73899356 | None:intergenic | 60.0% | |
| TATATCGACAGGGGCGGACC+TGG | - | chr3_1:73901005-73901024 | Msa0374430:intron | 60.0% | |
| !!! | AATTTTGGGCCTGGGCTGGC+TGG | - | chr3_1:73901382-73901401 | Msa0374430:intron | 60.0% |
| GGTGTGGCACTTGCCACAGT+AGG | - | chr3_1:73901403-73901422 | Msa0374430:intron | 60.0% | |
| GCACTTGCCACAGTAGGCCT+TGG | - | chr3_1:73901409-73901428 | Msa0374430:intron | 60.0% | |
| GATCTGGCCAAGGCCTACTG+TGG | + | chr3_1:73901419-73901438 | None:intergenic | 60.0% | |
| TATAGGGGCGGATCTGGCCA+AGG | + | chr3_1:73901429-73901448 | None:intergenic | 60.0% | |
| !! | CGGTGCTTTGGAGGATGTGG+AGG | - | chr3_1:73903514-73903533 | Msa0374430:intron | 60.0% |
| GTATCCCATGAGCACCCGAC+TGG | - | chr3_1:73903554-73903573 | Msa0374430:intron | 60.0% | |
| AGACCTGGACCCTTGTTGGC+TGG | - | chr3_1:73903590-73903609 | Msa0374430:intron | 60.0% | |
| CATCCAGCCAACAAGGGTCC+AGG | + | chr3_1:73903596-73903615 | None:intergenic | 60.0% | |
| ! | GGACCCTTGTTGGCTGGATG+TGG | - | chr3_1:73903596-73903615 | Msa0374430:intron | 60.0% |
| GTTACGAGGGTTTGCGGCAG+AGG | + | chr3_1:73903654-73903673 | None:intergenic | 60.0% | |
| !!! | CCGGCGTACCGGTTTTGTAC+AGG | + | chr3_1:73904516-73904535 | None:intergenic | 60.0% |
| ACACGGTCGTAAGCGGCGGA+AGG | + | chr3_1:73896607-73896626 | None:intergenic | 65.0% | |
| AGCACAGTTGCCGGAGACGG+TGG | - | chr3_1:73896768-73896787 | Msa0374430:CDS | 65.0% | |
| AGTTGCCGGAGACGGTGGAG+TGG | - | chr3_1:73896773-73896792 | Msa0374430:CDS | 65.0% | |
| ! | GGCGGCGGTGGTGGTTTGAA+GGG | + | chr3_1:73899156-73899175 | None:intergenic | 65.0% |
| CTTCAAACCACCACCGCCGC+CGG | - | chr3_1:73899155-73899174 | Msa0374430:intron | 65.0% | |
| !! | CACCGCCGCCGGTTCATTGA+CGG | - | chr3_1:73899166-73899185 | Msa0374430:intron | 65.0% |
| TGCCGTCAATGAACCGGCGG+CGG | + | chr3_1:73899171-73899190 | None:intergenic | 65.0% | |
| GGACGGATACACCGGCGTAC+CGG | + | chr3_1:73904527-73904546 | None:intergenic | 65.0% | |
| CGTGCCTGGATCGGTACGGG+TGG | - | chr3_1:73896931-73896950 | Msa0374430:intron | 70.0% | |
| ! | CGGTCCACCCGTACCGATCC+AGG | + | chr3_1:73896938-73896957 | None:intergenic | 70.0% |
| ! | CGGCGGCGGTGGTGGTTTGA+AGG | + | chr3_1:73899157-73899176 | None:intergenic | 70.0% |
| CAATGAACCGGCGGCGGTGG+TGG | + | chr3_1:73899165-73899184 | None:intergenic | 70.0% | |
| CGTCAATGAACCGGCGGCGG+TGG | + | chr3_1:73899168-73899187 | None:intergenic | 70.0% | |
| CGGCCAACGGTGGCCGGAAA+AGG | + | chr3_1:73899327-73899346 | None:intergenic | 70.0% | |
| GATACGCGGCCAACGGTGGC+CGG | + | chr3_1:73899333-73899352 | None:intergenic | 70.0% | |
| AGTGCCACACCAGCCAGCCC+AGG | + | chr3_1:73901394-73901413 | None:intergenic | 70.0% | |
| !! | TGGGCCTGGGCTGGCTGGTG+TGG | - | chr3_1:73901387-73901406 | Msa0374430:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 73896275 | 73904788 | 73896275 | ID=Msa0374430;Name=Msa0374430 |
| chr3_1 | mRNA | 73896275 | 73904788 | 73896275 | ID=Msa0374430-mRNA-1;Parent=Msa0374430;Name=Msa0374430-mRNA-1;_AED=0.04;_eAED=0.04;_QI=233|1|1|1|1|1|5|299|476 |
| chr3_1 | exon | 73896275 | 73896939 | 73896275 | ID=Msa0374430-mRNA-1:exon:16958;Parent=Msa0374430-mRNA-1 |
| chr3_1 | exon | 73897062 | 73897190 | 73897062 | ID=Msa0374430-mRNA-1:exon:16957;Parent=Msa0374430-mRNA-1 |
| chr3_1 | exon | 73897303 | 73897617 | 73897303 | ID=Msa0374430-mRNA-1:exon:16956;Parent=Msa0374430-mRNA-1 |
| chr3_1 | exon | 73902897 | 73903022 | 73902897 | ID=Msa0374430-mRNA-1:exon:16955;Parent=Msa0374430-mRNA-1 |
| chr3_1 | exon | 73904061 | 73904788 | 73904061 | ID=Msa0374430-mRNA-1:exon:16954;Parent=Msa0374430-mRNA-1 |
| chr3_1 | five_prime_UTR | 73904556 | 73904788 | 73904556 | ID=Msa0374430-mRNA-1:five_prime_utr;Parent=Msa0374430-mRNA-1 |
| chr3_1 | CDS | 73904061 | 73904555 | 73904061 | ID=Msa0374430-mRNA-1:cds;Parent=Msa0374430-mRNA-1 |
| chr3_1 | CDS | 73902897 | 73903022 | 73902897 | ID=Msa0374430-mRNA-1:cds;Parent=Msa0374430-mRNA-1 |
| chr3_1 | CDS | 73897303 | 73897617 | 73897303 | ID=Msa0374430-mRNA-1:cds;Parent=Msa0374430-mRNA-1 |
| chr3_1 | CDS | 73897062 | 73897190 | 73897062 | ID=Msa0374430-mRNA-1:cds;Parent=Msa0374430-mRNA-1 |
| chr3_1 | CDS | 73896574 | 73896939 | 73896574 | ID=Msa0374430-mRNA-1:cds;Parent=Msa0374430-mRNA-1 |
| chr3_1 | three_prime_UTR | 73896275 | 73896573 | 73896275 | ID=Msa0374430-mRNA-1:three_prime_utr;Parent=Msa0374430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
