AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0653470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0653470 MtrunA17_Chr4g0047611 97.912 958 19 1 1 957 1 958 0.0 1945
Msa0653470 MtrunA17_Chr7g0241931 44.418 833 401 16 3 823 7 789 0.0 647
Msa0653470 MtrunA17_Chr4g0047581 66.957 115 33 1 848 957 48 162 6.54e-40 145
Msa0653470 MtrunA17_Chr4g0047581 64.000 100 31 2 96 192 11 108 9.91e-34 127
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0653470 AT4G21670.1 59.343 974 350 18 6 949 9 966 0.0 1092
Msa0653470 AT5G01270.2 46.272 778 354 18 2 772 6 726 0.0 619
Msa0653470 AT5G01270.1 46.272 778 354 18 2 772 6 726 0.0 619

Find 312 sgRNAs with CRISPR-Local

Find 744 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGCACAAATTGATTGAATT+AGG 0.152694 4_3:-61506109 Msa0653470:five_prime_UTR
TTGATGTTGTTGTTCACTTC+TGG 0.157253 4_3:+61505794 None:intergenic
ACTTGAACCATTGGCTTTAC+TGG 0.208461 4_3:+61501914 None:intergenic
ATGACGACAGACCTTGTTTC+TGG 0.216019 4_3:-61504775 Msa0653470:CDS
GTAGATCCACAACGAATTTC+TGG 0.232662 4_3:-61504590 Msa0653470:CDS
TACTACTGTTTGCTTCAAAA+TGG 0.232751 4_3:-61505675 Msa0653470:CDS
AGAAGCCTTCGCCTTGTATC+TGG 0.233500 4_3:+61501818 None:intergenic
CCTAGTTATCATTCGTTATC+TGG 0.234840 4_3:-61501352 Msa0653470:intron
TATGTGAATCAGGCCATTTC+AGG 0.240267 4_3:-61497280 Msa0653470:intron
TTTCATCTAATCATCATAAT+TGG 0.242489 4_3:+61505928 None:intergenic
CCGTATCAGCGGTCGAACTA+TGG 0.244363 4_3:+61504427 None:intergenic
GAAATGTTGCTTGCAATGTT+AGG 0.247371 4_3:-61502891 Msa0653470:CDS
GCCATCAACCTTAGAGAAAA+AGG 0.251095 4_3:+61501568 None:intergenic
GTTAATAACGGAGTCTTTAG+AGG 0.252728 4_3:+61496627 None:intergenic
TTCTCTTGTCAAGGGATTGC+TGG 0.258532 4_3:+61497174 None:intergenic
GTGATTAGGGTTTGAAGATT+GGG 0.260752 4_3:+61506178 None:intergenic
TTGAATTGTAGTATTGATTA+GGG 0.274080 4_3:+61506148 None:intergenic
ATTGAATTGTAGTATTGATT+AGG 0.275421 4_3:+61506147 None:intergenic
TCAATTACTAACGCCATCTT+TGG 0.279396 4_3:+61503149 None:intergenic
ATAAATTCAAAAGAACTATT+AGG 0.319906 4_3:-61503820 Msa0653470:CDS
AAGGGTGGTGGCTGTTGGGT+TGG 0.322111 4_3:-61497073 Msa0653470:three_prime_UTR
GGCACAAATTGATTGAATTA+GGG 0.322931 4_3:-61506108 Msa0653470:five_prime_UTR
GAATTTATCAAATTTGAATC+TGG 0.323700 4_3:+61503835 None:intergenic
TGATGTTGTTGTTCACTTCT+GGG 0.325901 4_3:+61505795 None:intergenic
AATCAATTCTCAATTTCATT+AGG 0.329297 4_3:+61496777 None:intergenic
CTGCAGCGATTCGCATCTTC+TGG 0.334001 4_3:-61497216 Msa0653470:CDS
AACACCAGTTGCAGTATTAC+AGG 0.334968 4_3:-61500746 Msa0653470:CDS
TTACTGGTATGACTGTTGTT+GGG 0.335148 4_3:-61497132 Msa0653470:three_prime_UTR
CTCTTGAGCGATCATCTCTA+TGG 0.336726 4_3:+61501389 None:intergenic
AGGGTGGTGGCTGTTGGGTT+GGG 0.340617 4_3:-61497072 Msa0653470:three_prime_UTR
TAACCGTTGTCATTTGCATT+AGG 0.342914 4_3:+61498765 None:intergenic
GAGATAGATGGCCAGGTCTA+TGG 0.343135 4_3:-61497853 Msa0653470:CDS
CTAGGATCTAAAACCCTTGA+TGG 0.345596 4_3:+61498666 None:intergenic
TACAGGATTGGGGTGTCTAA+TGG 0.352012 4_3:+61501739 None:intergenic
AAAGAAATGCTTGTAGATTC+TGG 0.352389 4_3:-61501629 Msa0653470:CDS
TCAATATACTCTTGTCCTCT+TGG 0.366138 4_3:+61504543 None:intergenic
TTGGAAGTGGCAAACGCATT+AGG 0.366521 4_3:-61506306 None:intergenic
GGTGATTAGGGTTTGAAGAT+TGG 0.368207 4_3:+61506177 None:intergenic
GAATCTACAAGCATTTCTTT+AGG 0.369862 4_3:+61501632 None:intergenic
TAGAATGGAAGCGCGATATA+AGG 0.371179 4_3:-61500021 Msa0653470:CDS
TGAGGATTCTATTAAACATT+TGG 0.371520 4_3:-61499994 Msa0653470:CDS
ATCATAATTGGCGTCAAAAT+CGG 0.373641 4_3:+61505940 None:intergenic
TCAATTTCATTAGGTTGGTT+TGG 0.375480 4_3:+61496786 None:intergenic
TTACCTCCTTTGGCAATCTC+TGG 0.375894 4_3:+61501510 None:intergenic
AACATAGTCATTACCTCCTT+TGG 0.376563 4_3:+61501500 None:intergenic
GTATCAAGGGGAGGTGATGT+TGG 0.380357 4_3:-61505834 Msa0653470:CDS
GTGGGTAATGTTAGTTCTCT+TGG 0.381089 4_3:-61498741 Msa0653470:CDS
GCGGAAACTTGTACAGGATT+GGG 0.383466 4_3:+61501728 None:intergenic
GTTGTTAAATCTCAGATGTT+TGG 0.383490 4_3:-61504711 Msa0653470:CDS
TTGTTAAATCTCAGATGTTT+GGG 0.385878 4_3:-61504710 Msa0653470:CDS
TGCAACATGGACAAGATGTT+AGG 0.391794 4_3:-61501790 Msa0653470:CDS
AGTGATGGTGACGGCGATTT+GGG 0.393697 4_3:+61506039 None:intergenic
TCAGCTTGAGGAGCATAGTA+TGG 0.395892 4_3:+61503062 None:intergenic
GCAACCAATACTCCATTGAT+TGG 0.397511 4_3:+61496893 None:intergenic
GTAAGATAATCACATCTTGA+TGG 0.399089 4_3:-61496918 Msa0653470:three_prime_UTR
TTGGATGGCATGAGCCATCT+TGG 0.400381 4_3:+61503168 None:intergenic
TCTTTAGGTAGTACCCTGTT+TGG 0.400428 4_3:+61501647 None:intergenic
GGTGGAATATACATCATCTT+TGG 0.404500 4_3:-61500568 Msa0653470:CDS
CTTACTGGTATGACTGTTGT+TGG 0.405053 4_3:-61497133 Msa0653470:three_prime_UTR
TCAATCGGAGATTCAAAATC+AGG 0.406496 4_3:-61506129 Msa0653470:five_prime_UTR
TTTGGGTATAGTGTTTGATC+TGG 0.411621 4_3:-61504693 Msa0653470:CDS
AATGTGGTGTTGTTCTATAT+TGG 0.412982 4_3:+61497002 None:intergenic
AATGAGACTGCCTCCTCTTT+AGG 0.413517 4_3:+61498705 None:intergenic
ATCTTTAATATCATCTTCAT+AGG 0.414639 4_3:+61502480 None:intergenic
TTGGTTCACAACCACCAAAC+AGG 0.415555 4_3:-61501661 Msa0653470:CDS
TGTGAAGGGTGGTGGCTGTT+GGG 0.416900 4_3:-61497077 Msa0653470:three_prime_UTR
AGTCTCTGCCCTCAAAGAAT+TGG 0.417437 4_3:-61498616 Msa0653470:intron
CAGTGCATGATGGAGGGTCT+TGG 0.420440 4_3:-61498485 Msa0653470:CDS
ACAGCTGTTATGCCGATGTA+TGG 0.422975 4_3:-61504833 Msa0653470:CDS
GTATGGGGAAGAATTACATT+TGG 0.426229 4_3:-61504816 Msa0653470:CDS
AGGGATCTTGACTCTGAATC+TGG 0.428657 4_3:-61500790 Msa0653470:CDS
TGACGACAGACCTTGTTTCT+GGG 0.429097 4_3:-61504774 Msa0653470:CDS
CGTTCTTCAGGCTGCTGAGA+AGG 0.433259 4_3:-61497681 Msa0653470:intron
AATTCTCAATTTCATTAGGT+TGG 0.433928 4_3:+61496781 None:intergenic
TTCTATATTGGCATTGAGCT+CGG 0.434917 4_3:+61497014 None:intergenic
ACTAGATAATTGCTCACGTC+AGG 0.435489 4_3:+61502445 None:intergenic
AAGTGATGGTGACGGCGATT+TGG 0.437027 4_3:+61506038 None:intergenic
TATCAAGGGGAGGTGATGTT+GGG 0.438251 4_3:-61505833 Msa0653470:CDS
TTGGAAGTTAAGAGATCAAC+GGG 0.440722 4_3:-61498642 Msa0653470:CDS
ACAGGATTGGGGTGTCTAAT+GGG 0.441847 4_3:+61501740 None:intergenic
CCGACCCACTTAAGTTGAAA+TGG 0.442699 4_3:+61497048 None:intergenic
TTGTTCAATGTCTTCCAAGA+TGG 0.444512 4_3:-61503182 Msa0653470:CDS
AATCCCTTGACAAGAGAAAC+AGG 0.447003 4_3:-61497169 Msa0653470:exon
AGCCTCGTCCCATGTTAATC+CGG 0.448078 4_3:+61497822 None:intergenic
CCAGATAACGAATGATAACT+AGG 0.453366 4_3:+61501352 None:intergenic
TGAATCTCACCAATTCTTTG+AGG 0.454278 4_3:+61498607 None:intergenic
AGCGGAAACTTGTACAGGAT+TGG 0.454708 4_3:+61501727 None:intergenic
TATGCAAGCTTGATTCTAAA+GGG 0.454773 4_3:+61501888 None:intergenic
TTGGGGTGTCTAATGGGAAA+TGG 0.457675 4_3:+61501746 None:intergenic
CAGCTGCATCAGATCCATCA+AGG 0.458170 4_3:-61498680 Msa0653470:CDS
TGCACTGAAGTGTGGAACTA+AGG 0.458500 4_3:-61500719 Msa0653470:intron
CGTATCAGCGGTCGAACTAT+GGG 0.458962 4_3:+61504428 None:intergenic
TGGGACCATTTCAACTTAAG+TGG 0.460087 4_3:-61497053 Msa0653470:three_prime_UTR
TGTTTGCACAATGGCTGAAA+GGG 0.461207 4_3:-61503890 Msa0653470:CDS
GCAGGGGATGACATCCCCTT+TGG 0.462943 4_3:-61500832 Msa0653470:intron
TATAAATCAGTGGTGTATCA+AGG 0.463890 4_3:-61505848 Msa0653470:CDS
TTATTCGAGAATCCCTGAAA+TGG 0.464504 4_3:+61497267 None:intergenic
GGAGAACTGCAGCTCTCTGC+TGG 0.465113 4_3:+61500542 None:intergenic
TGAACTGAATTTGTTAACAT+TGG 0.465766 4_3:+61498437 None:intergenic
CTGAAGAGAAGAAGTGAGCC+TGG 0.465866 4_3:+61502030 None:intergenic
ATTTGGTTGCAATGCATTCA+CGG 0.466042 4_3:-61504799 Msa0653470:CDS
TTAGGTTGAGATAGATGGCC+AGG 0.466392 4_3:-61497860 Msa0653470:intron
AAAGGGGCAACTTGAACCAT+TGG 0.466466 4_3:+61501905 None:intergenic
TTAGGTAGTACCCTGTTTGG+TGG 0.466553 4_3:+61501650 None:intergenic
TCTAACTTAGCAGTTGTCAT+AGG 0.466599 4_3:+61502055 None:intergenic
ATCTTGATGGTCCCAATCAA+TGG 0.467905 4_3:-61496905 Msa0653470:three_prime_UTR
ATTGGCTTTACTGGTGTAGC+AGG 0.468409 4_3:+61501923 None:intergenic
TGCAAATGACAACGGTTATG+TGG 0.469305 4_3:-61498760 Msa0653470:CDS
AAATGTTGCTTGCAATGTTA+GGG 0.469579 4_3:-61502890 Msa0653470:CDS
TCACGTGCTAAGGATGAGTC+TGG 0.472220 4_3:-61498816 Msa0653470:CDS
AGTTCTCCTGCTAGAGAAGA+AGG 0.472341 4_3:-61501866 Msa0653470:CDS
TCACCATCACTTTCAATTCA+CGG 0.472801 4_3:-61506027 Msa0653470:five_prime_UTR
TGGGGATTTATTGTTGCCAC+AGG 0.473114 4_3:-61504755 Msa0653470:CDS
AAATACAATGCGCTCATTCG+AGG 0.473176 4_3:-61504651 Msa0653470:CDS
CATCATCTTGTCTTGTAAAC+CGG 0.473906 4_3:+61496848 None:intergenic
GCTTGCGCCCTCTTGCAATC+AGG 0.474574 4_3:+61503926 None:intergenic
GCAATCTCTGGTGGCTCTCG+TGG 0.475076 4_3:+61501522 None:intergenic
GTAGGTCATCTTCTAGCCAC+AGG 0.476095 4_3:-61500810 Msa0653470:CDS
CATCTTCTGGTAGATATCCT+AGG 0.476477 4_3:-61497203 Msa0653470:CDS
CAGCTGTTATGCCGATGTAT+GGG 0.479732 4_3:-61504832 Msa0653470:CDS
TTTCTTGCAACGCATAAGAC+AGG 0.481504 4_3:+61502910 None:intergenic
GATGAGTCTGGTTCTGCATA+TGG 0.482194 4_3:-61498804 Msa0653470:CDS
GACCTGCATGGGAAGATCTT+CGG 0.482586 4_3:-61503954 Msa0653470:CDS
GCAACATGGACAAGATGTTA+GGG 0.485460 4_3:-61501789 Msa0653470:CDS
TTTCCTGTAGAAGAGGAGAT+TGG 0.485845 4_3:-61501680 Msa0653470:CDS
CTGAAATAGAGGTGAGGCAC+TGG 0.485897 4_3:-61496956 Msa0653470:three_prime_UTR
ATCATAGATGCGTGTGGTGC+AGG 0.486774 4_3:+61501974 None:intergenic
CTATGCAAGCTTGATTCTAA+AGG 0.488703 4_3:+61501887 None:intergenic
GAATCTCACCAATTCTTTGA+GGG 0.489832 4_3:+61498608 None:intergenic
AGACTGCCTCCTCTTTAGGC+AGG 0.490073 4_3:+61498709 None:intergenic
GCGAATCGCTGCAGAGTTCG+TGG 0.490243 4_3:+61497225 None:intergenic
GGGATTTGGCAGAACTAGAA+TGG 0.490515 4_3:-61500036 Msa0653470:CDS
GCAGTATGCTGAAAATGATC+AGG 0.490876 4_3:-61504519 Msa0653470:CDS
TTCTAGTTCTGCCAAATCCC+TGG 0.491193 4_3:+61500039 None:intergenic
TCATCTTCATAGGCAATTTG+AGG 0.492346 4_3:+61502490 None:intergenic
GACGATGGATCTGCTTCCTA+TGG 0.493208 4_3:-61502257 Msa0653470:CDS
TGATTAGGGTTTGAAGATTG+GGG 0.493333 4_3:+61506179 None:intergenic
TTACTGGTGTAGCAGGTTGA+AGG 0.495857 4_3:+61501930 None:intergenic
AATCAATACTACAATTCAAT+CGG 0.496091 4_3:-61506144 Msa0653470:five_prime_UTR
ATTATCCTCCACTGAAATAG+AGG 0.496095 4_3:-61496967 Msa0653470:three_prime_UTR
GCAAGTGTAAGAGCTGATTC+TGG 0.496248 4_3:+61505636 None:intergenic
GATGGCCAGGTCTATGGTAA+AGG 0.497354 4_3:-61497847 Msa0653470:CDS
GAACCAATCTCCTCTTCTAC+AGG 0.497383 4_3:+61501677 None:intergenic
ATGGCCAGGTCTATGGTAAA+GGG 0.497401 4_3:-61497846 Msa0653470:CDS
GATTCTATTAAACATTTGGC+AGG 0.498397 4_3:-61499990 Msa0653470:intron
AATGATAACTAGGGAGCATA+TGG 0.499503 4_3:+61501362 None:intergenic
GGGATTGCTGGAGCATTCCT+AGG 0.502433 4_3:+61497186 None:intergenic
CAGGCTGCTGAGAAGGCACT+TGG 0.503322 4_3:-61497674 Msa0653470:CDS
GTGTGGATATGCTTCGAGAC+CGG 0.505658 4_3:-61496867 Msa0653470:three_prime_UTR
ATGTGAAGGGTGGTGGCTGT+TGG 0.505734 4_3:-61497078 Msa0653470:three_prime_UTR
CCATAGTTCGACCGCTGATA+CGG 0.506028 4_3:-61504427 Msa0653470:CDS
AATCCTGTTTCTCTTGTCAA+GGG 0.506388 4_3:+61497166 None:intergenic
TCCGCTCGTGCACCATCCCG+TGG 0.507027 4_3:-61501710 Msa0653470:CDS
AAATCCTGTTTCTCTTGTCA+AGG 0.507090 4_3:+61497165 None:intergenic
ATTTCCTGTAATACTGCAAC+TGG 0.507958 4_3:+61500742 None:intergenic
TGAGGTAGAAAGAAAATTGA+AGG 0.509056 4_3:-61502195 Msa0653470:intron
GAATTTGTTAACATTGGAGC+AGG 0.509399 4_3:+61498443 None:intergenic
CAGAATTAGACCCAGATACA+AGG 0.509572 4_3:-61501829 Msa0653470:CDS
ACTTCCCCTTCTTCTCTAGC+AGG 0.511969 4_3:+61501860 None:intergenic
CGCATTGTATGCGTTAAGTC+CGG 0.512609 4_3:-61503796 Msa0653470:intron
GACTGCCTCCTCTTTAGGCA+GGG 0.513560 4_3:+61498710 None:intergenic
CCTCCTTTGGCAATCTCTGG+TGG 0.515237 4_3:+61501513 None:intergenic
GCTAGAGAAGAAGGGGAAGT+AGG 0.515832 4_3:-61501857 Msa0653470:CDS
TACTGGTATGACTGTTGTTG+GGG 0.517390 4_3:-61497131 Msa0653470:three_prime_UTR
GAAGCCTTCGCCTTGTATCT+GGG 0.517685 4_3:+61501819 None:intergenic
GATGCGTGTGGTGCAGGTGG+TGG 0.517828 4_3:+61501980 None:intergenic
TCGCTAACATAACCCGGTAG+TGG 0.518593 4_3:-61496668 Msa0653470:three_prime_UTR
CAACCAATACTCCATTGATT+GGG 0.519804 4_3:+61496894 None:intergenic
ATGTGAATCAGGCCATTTCA+GGG 0.520172 4_3:-61497279 Msa0653470:intron
ACAACGAATTTCTGGCATGC+AGG 0.520484 4_3:-61504582 Msa0653470:CDS
AGGGGAGGTGATGTTGGGTG+AGG 0.524597 4_3:-61505828 Msa0653470:CDS
CTCCGAAGATCTTCCCATGC+AGG 0.526395 4_3:+61503952 None:intergenic
TAATTGCTCACGTCAGGGGC+AGG 0.526581 4_3:+61502451 None:intergenic
CAGGTCTATGGTAAAGGGAC+CGG 0.526934 4_3:-61497841 Msa0653470:CDS
CAGTATACAATGGTATCTCC+TGG 0.530309 4_3:-61502010 Msa0653470:CDS
TTTCTTCAGTGCATGATGGA+GGG 0.533552 4_3:-61498491 Msa0653470:intron
GAATTGTAGTATTGATTAGG+GGG 0.534734 4_3:+61506150 None:intergenic
CCTCAAGACTCTGTTAATAA+CGG 0.535221 4_3:+61496615 None:intergenic
TTGTTTGCACAATGGCTGAA+AGG 0.536700 4_3:-61503891 Msa0653470:CDS
AATGATCAGGTAGTTGATAA+CGG 0.538229 4_3:-61504506 Msa0653470:CDS
GCATAGTATGGAGCAAATGC+AGG 0.538993 4_3:+61503074 None:intergenic
CAAGGTGATAGAACCACTAC+CGG 0.539999 4_3:+61496655 None:intergenic
GAGTATGCGTTGCATTGCAT+TGG 0.541173 4_3:+61496817 None:intergenic
CCGCTCGTGCACCATCCCGT+GGG 0.541232 4_3:-61501709 Msa0653470:CDS
ACTGCCTCCTCTTTAGGCAG+GGG 0.542578 4_3:+61498711 None:intergenic
AGCAAATTTACCTCAGCTTG+AGG 0.544349 4_3:+61503050 None:intergenic
TTGACGATCGCTTGAAAGTG+TGG 0.546180 4_3:-61503130 Msa0653470:CDS
TTCTCCTGCTAGAGAAGAAG+GGG 0.546543 4_3:-61501864 Msa0653470:CDS
CATATATTTATCACGTGCTA+AGG 0.549424 4_3:-61498826 Msa0653470:CDS
CATTGTATTTGCTACGACAA+GGG 0.550005 4_3:+61504664 None:intergenic
GACGACAGACCTTGTTTCTG+GGG 0.551623 4_3:-61504773 Msa0653470:CDS
TTAATAACGGAGTCTTTAGA+GGG 0.552752 4_3:+61496628 None:intergenic
TGGCTCATGCCATCCAAAGA+TGG 0.556645 4_3:-61503162 Msa0653470:CDS
TTACTAACGCCATCTTTGGA+TGG 0.556894 4_3:+61503153 None:intergenic
CTAGAAGATGACCTACCAAA+GGG 0.558062 4_3:+61500817 None:intergenic
GATCTCTTAACTTCCAACCT+AGG 0.559127 4_3:+61498648 None:intergenic
ATAAATCAGTGGTGTATCAA+GGG 0.561055 4_3:-61505847 Msa0653470:CDS
GGGACCATTTCAACTTAAGT+GGG 0.563453 4_3:-61497052 Msa0653470:three_prime_UTR
AAAAGGATGGTTGATGAGGC+CGG 0.563971 4_3:+61501585 None:intergenic
GGGACTATGCGCTAGAAATG+TGG 0.566303 4_3:-61503870 Msa0653470:CDS
AGATTCTGGTCCATCACGTA+TGG 0.567393 4_3:-61501615 Msa0653470:CDS
TTCAACAATGTGAAGGGTGG+TGG 0.568405 4_3:-61497085 Msa0653470:three_prime_UTR
GGAGTATTGGTTGCGTTGTG+TGG 0.569142 4_3:-61496884 Msa0653470:three_prime_UTR
CTTGTGTATCAGAGAGAACA+AGG 0.570390 4_3:-61505609 Msa0653470:intron
TTTGACACGCATCAATCCGC+AGG 0.570857 4_3:-61504384 Msa0653470:intron
GCAGGTGGTGGAACTGAACC+AGG 0.572173 4_3:+61501992 None:intergenic
AAACGGATCTCTATTTCCAT+AGG 0.572538 4_3:+61502241 None:intergenic
AGATAATGCTGGAACAAGCT+CGG 0.575803 4_3:+61504463 None:intergenic
GCAAATGACAACGGTTATGT+GGG 0.575899 4_3:-61498759 Msa0653470:CDS
CCCACGGGATGGTGCACGAG+CGG 0.575953 4_3:+61501709 None:intergenic
AGTGGTGAACACCTCTCACT+AGG 0.576400 4_3:+61505716 None:intergenic
CGGTCCCTTTACCATAGACC+TGG 0.577777 4_3:+61497842 None:intergenic
TGATGACTGTCAGATAATGC+TGG 0.578075 4_3:+61504452 None:intergenic
CTAGTACAACCATTCAGTAC+AGG 0.580882 4_3:-61496721 Msa0653470:three_prime_UTR
GTTCTCCTGCTAGAGAAGAA+GGG 0.582396 4_3:-61501865 Msa0653470:CDS
TAATACAATGGTACAAAATG+TGG 0.583217 4_3:+61496986 None:intergenic
ATGGGACGAGGCTAAAATGC+AGG 0.586932 4_3:-61497812 Msa0653470:intron
CTGCCTCCTCTTTAGGCAGG+GGG 0.587416 4_3:+61498712 None:intergenic
CTAGATAATTGCTCACGTCA+GGG 0.588151 4_3:+61502446 None:intergenic
GGTCCCAATCAATGGAGTAT+TGG 0.588357 4_3:-61496897 Msa0653470:three_prime_UTR
CGCTCGTGCACCATCCCGTG+GGG 0.589699 4_3:-61501708 Msa0653470:CDS
GCACGAGCGGAAACTTGTAC+AGG 0.590581 4_3:+61501722 None:intergenic
TTCTTCTCTTCAGTATACAA+TGG 0.591221 4_3:-61502020 Msa0653470:CDS
GAAAGATGAAGTATACGCAC+AGG 0.591633 4_3:-61498414 Msa0653470:intron
GTTGGAAGTTAAGAGATCAA+CGG 0.591847 4_3:-61498643 Msa0653470:CDS
GAGCAATTATCTAGTTTCAG+AGG 0.592959 4_3:-61502437 Msa0653470:intron
CAGATAACGAATGATAACTA+GGG 0.593484 4_3:+61501353 None:intergenic
TAGATAATTGCTCACGTCAG+GGG 0.595191 4_3:+61502447 None:intergenic
AGCTGCATCAGATCCATCAA+GGG 0.595432 4_3:-61498679 Msa0653470:CDS
ACAATAAATCCCCAGAAACA+AGG 0.595692 4_3:+61504764 None:intergenic
TATTAACAGAGTCTTGAGGT+TGG 0.595722 4_3:-61496611 Msa0653470:three_prime_UTR
CGGAGCTACCTGATTGCAAG+AGG 0.598380 4_3:-61503934 Msa0653470:CDS
CCCTAGATCCAGAAAACGAA+AGG 0.598960 4_3:+61506256 None:intergenic
CGGTGCTTCTCCATACGTGA+TGG 0.599393 4_3:+61501605 None:intergenic
ATAGTATGAAGAACAGCAAG+TGG 0.600429 4_3:+61505698 None:intergenic
TCTGCATATGGTGATGTGAG+TGG 0.601289 4_3:-61498792 Msa0653470:CDS
CGGAAACTTGTACAGGATTG+GGG 0.602565 4_3:+61501729 None:intergenic
CAGGAAATTGCACTGAAGTG+TGG 0.604310 4_3:-61500727 Msa0653470:CDS
GTAAAGGGACCGGATTAACA+TGG 0.605523 4_3:-61497831 Msa0653470:CDS
GATCCGTGAATTGAAAGTGA+TGG 0.606135 4_3:+61506024 None:intergenic
CTTGTTCTCTCTGATACACA+AGG 0.606958 4_3:+61505610 None:intergenic
GTGCCTCACCTCTATTTCAG+TGG 0.606963 4_3:+61496959 None:intergenic
CCATTTCAACTTAAGTGGGT+CGG 0.607098 4_3:-61497048 Msa0653470:three_prime_UTR
TGAAGAGAAGAAGTGAGCCT+GGG 0.609026 4_3:+61502031 None:intergenic
TGAATTGTAGTATTGATTAG+GGG 0.609083 4_3:+61506149 None:intergenic
GCGATACAAGTGTTCTTGTG+AGG 0.609671 4_3:-61503981 Msa0653470:CDS
GAGTCTTTAGAGGGGACTCA+AGG 0.610096 4_3:+61496637 None:intergenic
TTGCTCACGTCAGGGGCAGG+AGG 0.612851 4_3:+61502454 None:intergenic
GGATGAGAAAGATCAACCTC+GGG 0.613520 4_3:-61503108 Msa0653470:CDS
TTCTTGCAACGCATAAGACA+GGG 0.614336 4_3:+61502911 None:intergenic
GCATTGTATTTGCTACGACA+AGG 0.614622 4_3:+61504663 None:intergenic
GGGATGACATCCCCTTTGGT+AGG 0.615200 4_3:-61500828 Msa0653470:CDS
TGTGAGGTTGAGACCTGCAT+GGG 0.616136 4_3:-61503965 Msa0653470:CDS
ACGAATTTCTGGCATGCAGG+CGG 0.618925 4_3:-61504579 Msa0653470:CDS
AGCTGTTATGCCGATGTATG+GGG 0.618991 4_3:-61504831 Msa0653470:CDS
GGGATGGTTTCCTGTAGAAG+AGG 0.619654 4_3:-61501687 Msa0653470:CDS
CAACTGCTAAGTTAGATCCC+AGG 0.623962 4_3:-61502048 Msa0653470:CDS
CCTCACCTCTATTTCAGTGG+AGG 0.625651 4_3:+61496962 None:intergenic
CCACCAGAGATTGCCAAAGG+AGG 0.628128 4_3:-61501513 Msa0653470:intron
TAAATCAGTGGTGTATCAAG+GGG 0.628956 4_3:-61505846 Msa0653470:CDS
GGTTGAAGGAACTGTGCGTG+AGG 0.629555 4_3:+61501944 None:intergenic
TGGTTCACAACCACCAAACA+GGG 0.630610 4_3:-61501660 Msa0653470:CDS
ATCAGTGGTGTATCAAGGGG+AGG 0.632353 4_3:-61505843 Msa0653470:CDS
TTTCCTAATGCAAATGACAA+CGG 0.637618 4_3:-61498768 Msa0653470:CDS
GCTAGAAGATGACCTACCAA+AGG 0.638457 4_3:+61500816 None:intergenic
TGATGGCATGGCAGATGCTG+AGG 0.638496 4_3:-61502213 Msa0653470:CDS
GTTTGACTTCTACAGGACGA+TGG 0.638977 4_3:-61502272 Msa0653470:intron
AAGGTGATAGAACCACTACC+GGG 0.638993 4_3:+61496656 None:intergenic
CCGTTATTAACAGAGTCTTG+AGG 0.639479 4_3:-61496615 Msa0653470:three_prime_UTR
CATCACGTATGGAGAAGCAC+CGG 0.639675 4_3:-61501604 Msa0653470:CDS
GGGATGAGAAAGATCAACCT+CGG 0.640588 4_3:-61503109 Msa0653470:CDS
ATGCAAGCTTGATTCTAAAG+GGG 0.641469 4_3:+61501889 None:intergenic
TGTAATTCTTCCCCATACAT+CGG 0.643719 4_3:+61504821 None:intergenic
GACCGGATTAACATGGGACG+AGG 0.645213 4_3:-61497824 Msa0653470:CDS
GTTGCTTGCAATGTTAGGGG+TGG 0.645636 4_3:-61502886 Msa0653470:CDS
AGCGCGATATAAGGCTGCTG+AGG 0.646369 4_3:-61500012 Msa0653470:CDS
TAGGTCATCTTCTAGCCACA+GGG 0.647886 4_3:-61500809 Msa0653470:CDS
TGCATGCCAGAAATTCGTTG+TGG 0.649838 4_3:+61504584 None:intergenic
GGAAGTCTAAGAACAATGCA+TGG 0.650176 4_3:-61497653 Msa0653470:CDS
GAGCCACCAGAGATTGCCAA+AGG 0.656225 4_3:-61501516 Msa0653470:CDS
ATACTATGCTCCTCAAGCTG+AGG 0.657687 4_3:-61503060 Msa0653470:intron
TTACTGATTCAACAATGTGA+AGG 0.658274 4_3:-61497092 Msa0653470:three_prime_UTR
TGCTACACCAGTAAAGCCAA+TGG 0.658626 4_3:-61501921 Msa0653470:CDS
TAGACCCAGATACAAGGCGA+AGG 0.659790 4_3:-61501823 Msa0653470:CDS
GGAGCTACCTGATTGCAAGA+GGG 0.659861 4_3:-61503933 Msa0653470:CDS
TTCAGTGGAGGATAATACAA+TGG 0.661505 4_3:+61496974 None:intergenic
AGAGACGGCAGAGTTCTCCC+AGG 0.665045 4_3:-61497619 Msa0653470:intron
TGACGATCGCTTGAAAGTGT+GGG 0.665059 4_3:-61503129 Msa0653470:CDS
TTGTGAGGTTGAGACCTGCA+TGG 0.665083 4_3:-61503966 Msa0653470:CDS
GGGTGTCTAATGGGAAATGG+AGG 0.665273 4_3:+61501749 None:intergenic
ATGGCCACAGCATTCAGAGA+CGG 0.672222 4_3:-61497634 Msa0653470:CDS
ATAGATGCGTGTGGTGCAGG+TGG 0.672645 4_3:+61501977 None:intergenic
GCAGGAACGACGTGTACCCG+AGG 0.674336 4_3:+61503092 None:intergenic
TAGAATGAAGGATACCTCGA+TGG 0.674889 4_3:+61500521 None:intergenic
TACTGATTCAACAATGTGAA+GGG 0.675730 4_3:-61497091 Msa0653470:three_prime_UTR
AGACGAATTATAAAGTCCTG+TGG 0.679453 4_3:+61504739 None:intergenic
TCTGCCGTCTCTGAATGCTG+TGG 0.679661 4_3:+61497630 None:intergenic
GGAGATCAAGCGCTACCAAG+AGG 0.682061 4_3:-61504558 Msa0653470:CDS
AGGCTTCTCATATTGCAACA+TGG 0.682388 4_3:-61501803 Msa0653470:CDS
AATGTTGCTTGCAATGTTAG+GGG 0.688191 4_3:-61502889 Msa0653470:CDS
TAAAGGGACCGGATTAACAT+GGG 0.691890 4_3:-61497830 Msa0653470:CDS
GCTCGTGCACCATCCCGTGG+GGG 0.693202 4_3:-61501707 Msa0653470:CDS
GTTTACAAGACAAGATGATG+AGG 0.697907 4_3:-61496845 Msa0653470:three_prime_UTR
CCTCCACTGAAATAGAGGTG+AGG 0.702288 4_3:-61496962 Msa0653470:three_prime_UTR
TGAATTGAAAGTGATGGTGA+CGG 0.703614 4_3:+61506030 None:intergenic
CCAGAGAAAAGTAAACTCTG+AGG 0.714229 4_3:-61504612 Msa0653470:CDS
TAGAAGATGACCTACCAAAG+GGG 0.717447 4_3:+61500818 None:intergenic
TAATAACGGAGTCTTTAGAG+GGG 0.740608 4_3:+61496629 None:intergenic
AGAGCTGCAGTTCTCCATCG+AGG 0.747831 4_3:-61500535 Msa0653470:intron
TGATTCAACAATGTGAAGGG+TGG 0.753612 4_3:-61497088 Msa0653470:three_prime_UTR
AATTGTATCATAGATGCGTG+TGG 0.754034 4_3:+61501968 None:intergenic
ATTCAGAGTCAAGATCCCTG+TGG 0.788306 4_3:+61500794 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAAAAAATAAAAAAA+AGG + chr4_3:61504845-61504864 None:intergenic 0.0%
!!! TTTATTTTTTATTTTTATAA+TGG - chr4_3:61504856-61504875 Msa0653470:intron 0.0%
!! ATAAAATAGAATGAAAAATT+AGG + chr4_3:61496791-61496810 None:intergenic 10.0%
!!! TTTATACATTTTTTGTTTTT+GGG + chr4_3:61496917-61496936 None:intergenic 10.0%
!!! ATTTATACATTTTTTGTTTT+TGG + chr4_3:61496918-61496937 None:intergenic 10.0%
!! AAATTATATATGGAAAATAA+AGG + chr4_3:61497883-61497902 None:intergenic 10.0%
!! AATTAAAAAAACTTGTAATA+AGG + chr4_3:61499391-61499410 None:intergenic 10.0%
!!! ATTACAAGTTTTTTTAATTT+AGG - chr4_3:61499392-61499411 Msa0653470:intron 10.0%
!!! AATTTCTCATTTTTTTTAAT+CGG - chr4_3:61502382-61502401 Msa0653470:intron 10.0%
!! GGTAAAAAATTAAATAAAAA+TGG + chr4_3:61502537-61502556 None:intergenic 10.0%
!!! TTTTTATTTAATTTTTTACC+GGG - chr4_3:61502537-61502556 Msa0653470:intron 10.0%
!! AAAAAAAAAAAACAGTCTTT+GGG + chr4_3:61496880-61496899 None:intergenic 15.0%
!!! TTTTTTTTTTTGTGATTTGA+AGG - chr4_3:61496889-61496908 Msa0653470:three_prime_UTR 15.0%
!!! TTTTTTTTTTGTGATTTGAA+GGG - chr4_3:61496890-61496909 Msa0653470:three_prime_UTR 15.0%
!!! TTATGATATCAATTTGTTTT+TGG - chr4_3:61497732-61497751 Msa0653470:intron 15.0%
!! TTCTACAAGAAAATTATATA+TGG + chr4_3:61497893-61497912 None:intergenic 15.0%
!! TTTAAATATATCATTCTACT+GGG - chr4_3:61498492-61498511 Msa0653470:intron 15.0%
!! AATTTAATGTTGTGATTTAT+AGG + chr4_3:61498684-61498703 None:intergenic 15.0%
!! ATAAATTCAAAAGAACTATT+AGG - chr4_3:61498959-61498978 Msa0653470:intron 15.0%
!!! CTTTCAAATAATTTGTATTT+AGG + chr4_3:61499327-61499346 None:intergenic 15.0%
!! TACAAATTATTTGAAAGTTA+AGG - chr4_3:61499330-61499349 Msa0653470:intron 15.0%
!!! ACTATTTGAGAATTTTTAAT+AGG + chr4_3:61499419-61499438 None:intergenic 15.0%
!! TAAAAATTCTCAAATAGTTT+AGG - chr4_3:61499421-61499440 Msa0653470:intron 15.0%
!! AAAAATTCTCAAATAGTTTA+GGG - chr4_3:61499422-61499441 Msa0653470:intron 15.0%
!! ATATAGTTTAATTACTCTAT+GGG + chr4_3:61499449-61499468 None:intergenic 15.0%
!! AATATAGTTTAATTACTCTA+TGG + chr4_3:61499450-61499469 None:intergenic 15.0%
!!! TAAATAAATAGATATTTTCC+AGG + chr4_3:61500014-61500033 None:intergenic 15.0%
!! TATCATACAGAAAAATTATA+TGG + chr4_3:61501731-61501750 None:intergenic 15.0%
!!! ACATTTTAAAGTTTCATATA+AGG + chr4_3:61501827-61501846 None:intergenic 15.0%
!! TGTATAGAAAATATAAAACT+TGG + chr4_3:61502331-61502350 None:intergenic 15.0%
!!! TTTTATTTAATTTTTTACCG+GGG - chr4_3:61502538-61502557 Msa0653470:intron 15.0%
!! TAGAAATTTAATTGATCTTT+CGG - chr4_3:61502570-61502589 Msa0653470:intron 15.0%
!! GTGATAATAACTAAATAATA+TGG + chr4_3:61502969-61502988 None:intergenic 15.0%
!! TCTAATTTAACAATAAACAA+GGG + chr4_3:61503509-61503528 None:intergenic 15.0%
!! ATCTAATTTAACAATAAACA+AGG + chr4_3:61503510-61503529 None:intergenic 15.0%
!!! TTTACAACTTTTTTTAAAAG+AGG + chr4_3:61503901-61503920 None:intergenic 15.0%
!!! TAAATATATTTTGACCTTTT+TGG - chr4_3:61503917-61503936 Msa0653470:CDS 15.0%
!! TAATAGTGAAACATTATTTA+TGG - chr4_3:61505004-61505023 Msa0653470:intron 15.0%
!! TGAATACCAATTAAAAAAAA+AGG + chr4_3:61506085-61506104 None:intergenic 15.0%
!!! TTGAATTGTAGTATTGATTA+GGG + chr4_3:61496634-61496653 None:intergenic 20.0%
!!! ATTGAATTGTAGTATTGATT+AGG + chr4_3:61496635-61496654 None:intergenic 20.0%
!! AATCAATACTACAATTCAAT+CGG - chr4_3:61496635-61496654 Msa0653470:three_prime_UTR 20.0%
!! TTTCATCTAATCATCATAAT+TGG + chr4_3:61496854-61496873 None:intergenic 20.0%
!! CAAAAAAAAAAAACAGTCTT+TGG + chr4_3:61496881-61496900 None:intergenic 20.0%
!! ACAAAAAATGTATAAATCAG+TGG - chr4_3:61496921-61496940 Msa0653470:three_prime_UTR 20.0%
!! ACTTAAAGAACTTCAATATA+TGG - chr4_3:61497281-61497300 Msa0653470:intron 20.0%
!! ATAATATACCCCAATTAATT+GGG + chr4_3:61497460-61497479 None:intergenic 20.0%
!! AATAATATACCCCAATTAAT+TGG + chr4_3:61497461-61497480 None:intergenic 20.0%
!!! AAATATATTAATCGCGATTT+TGG - chr4_3:61497604-61497623 Msa0653470:intron 20.0%
!! ATGTATCATACTGAAAATAT+AGG - chr4_3:61497700-61497719 Msa0653470:intron 20.0%
!! GTTTAAATATATCATTCTAC+TGG - chr4_3:61498491-61498510 Msa0653470:intron 20.0%
!! AAATCACAACATTAAATTAG+TGG - chr4_3:61498686-61498705 Msa0653470:CDS 20.0%
!! AATCACAACATTAAATTAGT+GGG - chr4_3:61498687-61498706 Msa0653470:CDS 20.0%
!! TTCAAACATATTTAAGCATA+AGG - chr4_3:61498725-61498744 Msa0653470:CDS 20.0%
!! GAATTTATCAAATTTGAATC+TGG + chr4_3:61498947-61498966 None:intergenic 20.0%
!! TGAAAACAAAATTAACAAGA+AGG + chr4_3:61499037-61499056 None:intergenic 20.0%
!! AAGGATCCAATTAAAATTTA+GGG + chr4_3:61499234-61499253 None:intergenic 20.0%
!! TACAAATTACTTAAAAGTTC+AGG - chr4_3:61499299-61499318 Msa0653470:intron 20.0%
!! ACAAATTACTTAAAAGTTCA+GGG - chr4_3:61499300-61499319 Msa0653470:intron 20.0%
!! TGTTTCGATAATATTATACT+AGG - chr4_3:61499561-61499580 Msa0653470:intron 20.0%
!! CAGTTCATATAACTAAAAAA+GGG + chr4_3:61499807-61499826 None:intergenic 20.0%
!! TCAGTTCATATAACTAAAAA+AGG + chr4_3:61499808-61499827 None:intergenic 20.0%
!!! CTTTTTTTGTTTTGTTTTGT+AGG - chr4_3:61499832-61499851 Msa0653470:intron 20.0%
!! TAATTTAGAGATAAATGAGT+TGG - chr4_3:61500035-61500054 Msa0653470:CDS 20.0%
!! AGTATTATCTTTATAACAAC+TGG + chr4_3:61500194-61500213 None:intergenic 20.0%
!! ATCTTTAATATCATCTTCAT+AGG + chr4_3:61500302-61500321 None:intergenic 20.0%
!! GAAAGATCAATTAAATTTCT+AGG + chr4_3:61502571-61502590 None:intergenic 20.0%
!! TGTTAATCAAATAGAGAAAA+AGG + chr4_3:61502994-61503013 None:intergenic 20.0%
!! TAATTTAACAATAAACAAGG+GGG + chr4_3:61503507-61503526 None:intergenic 20.0%
!! CTAATTTAACAATAAACAAG+GGG + chr4_3:61503508-61503527 None:intergenic 20.0%
!!! TAAATGTGTTATTTTACCTT+AGG + chr4_3:61503539-61503558 None:intergenic 20.0%
!!! TAAATGACAAATCCATTTTT+TGG - chr4_3:61503614-61503633 Msa0653470:intron 20.0%
!! TAAAAGTTGAAACTATTACA+TGG + chr4_3:61503643-61503662 None:intergenic 20.0%
!!! TAATCATTTTTTATGATGCT+AGG + chr4_3:61503805-61503824 None:intergenic 20.0%
!!! AACCATATTTTTGTTAACTT+CGG - chr4_3:61504223-61504242 Msa0653470:intron 20.0%
!! CTGAACTAATTCATTTAAAA+AGG - chr4_3:61504419-61504438 Msa0653470:CDS 20.0%
!!! GTTTACTATTCTTATTTTTG+AGG - chr4_3:61504645-61504664 Msa0653470:CDS 20.0%
!! AAGAAAGTTAATCAAATTCA+AGG + chr4_3:61505046-61505065 None:intergenic 20.0%
!! TGATTAACTTTCTTACATAT+TGG - chr4_3:61505052-61505071 Msa0653470:intron 20.0%
!! CAAAATAATATAATAGACCT+GGG + chr4_3:61505180-61505199 None:intergenic 20.0%
!! TCAAAATAATATAATAGACC+TGG + chr4_3:61505181-61505200 None:intergenic 20.0%
!!! TTGTTGTTTATTCTCATATA+TGG - chr4_3:61505432-61505451 Msa0653470:intron 20.0%
!!! TAACTATTTTTCTTCATCAT+TGG - chr4_3:61505455-61505474 Msa0653470:intron 20.0%
!! AATCAATTCTCAATTTCATT+AGG + chr4_3:61506005-61506024 None:intergenic 20.0%
!! ATAACTCAACAAAAAAACTA+GGG + chr4_3:61506259-61506278 None:intergenic 20.0%
!!! TGAATTGTAGTATTGATTAG+GGG + chr4_3:61496633-61496652 None:intergenic 25.0%
! AGATTTAGTCCAAAATCATA+GGG + chr4_3:61497255-61497274 None:intergenic 25.0%
!! GTTAATGTTGCAAGAATTTT+TGG - chr4_3:61497329-61497348 Msa0653470:intron 25.0%
! GTATCTGTTAAATGATCAAT+TGG + chr4_3:61497417-61497436 None:intergenic 25.0%
! ATCATACTGAAAATATAGGT+TGG - chr4_3:61497704-61497723 Msa0653470:intron 25.0%
! TCATACTGAAAATATAGGTT+GGG - chr4_3:61497705-61497724 Msa0653470:intron 25.0%
! TTGTCTTACTTAAATTTACG+CGG - chr4_3:61497804-61497823 Msa0653470:intron 25.0%
!! TACTGGTTACTTAAATTTAC+CGG - chr4_3:61497828-61497847 Msa0653470:CDS 25.0%
! TTGTTAAATCTCAGATGTTT+GGG - chr4_3:61498069-61498088 Msa0653470:intron 25.0%
!! ATGAGGACATCTTATATTTT+AGG - chr4_3:61499109-61499128 Msa0653470:intron 25.0%
! AAACATTCTCAAATAGTACA+GGG + chr4_3:61499143-61499162 None:intergenic 25.0%
! TAAACATTCTCAAATAGTAC+AGG + chr4_3:61499144-61499163 None:intergenic 25.0%
! ACTTCACCAAAATTTGTAAT+TGG - chr4_3:61499206-61499225 Msa0653470:intron 25.0%
! CTTCACCAAAATTTGTAATT+GGG - chr4_3:61499207-61499226 Msa0653470:intron 25.0%
! AGGATCCAATTAAAATTTAG+GGG + chr4_3:61499233-61499252 None:intergenic 25.0%
! CAAGGATCCAATTAAAATTT+AGG + chr4_3:61499235-61499254 None:intergenic 25.0%
!!! CTTTTAAGTAATTTGTAGCA+TGG + chr4_3:61499296-61499315 None:intergenic 25.0%
! TTATCTGTATACTGAAATGA+AGG - chr4_3:61499952-61499971 Msa0653470:intron 25.0%
! TATCTGTATACTGAAATGAA+GGG - chr4_3:61499953-61499972 Msa0653470:intron 25.0%
!!! TGTCATTTTTCTAATCTGAT+AGG - chr4_3:61500395-61500414 Msa0653470:intron 25.0%
!!! GTCATTTTTCTAATCTGATA+GGG - chr4_3:61500396-61500415 Msa0653470:intron 25.0%
! AAATCTGCAACAACAAAAAA+TGG + chr4_3:61501369-61501388 None:intergenic 25.0%
!!! GAGTAATTAAGTTTGAGTTT+TGG - chr4_3:61501657-61501676 Msa0653470:CDS 25.0%
!!! GAAATAACAACTCTACTTTT+TGG - chr4_3:61501696-61501715 Msa0653470:CDS 25.0%
! AAGTTTCATATAAGGTTTCT+TGG + chr4_3:61501819-61501838 None:intergenic 25.0%
! GCACTAAAAATAACAGAATT+TGG + chr4_3:61501890-61501909 None:intergenic 25.0%
! TGTACTATTTAAGCTTTCTT+TGG - chr4_3:61502148-61502167 Msa0653470:intron 25.0%
!! TAGAGAACTATTTTGTTCAA+TGG - chr4_3:61502355-61502374 Msa0653470:intron 25.0%
!! AGAGAACTATTTTGTTCAAT+GGG - chr4_3:61502356-61502375 Msa0653470:intron 25.0%
! TGTGTTTAGTTAATTAAGCA+TGG + chr4_3:61502439-61502458 None:intergenic 25.0%
! AATTTAATTGATCTTTCGGT+TGG - chr4_3:61502574-61502593 Msa0653470:intron 25.0%
! TGAGGATTCTATTAAACATT+TGG - chr4_3:61502785-61502804 Msa0653470:intron 25.0%
! ATAGCATTATATAGAACTGT+TGG - chr4_3:61502848-61502867 Msa0653470:intron 25.0%
! ATATCTTGATATTAGCTCAT+AGG - chr4_3:61502893-61502912 Msa0653470:CDS 25.0%
! TATCCTAATATCCTATAAAG+AGG - chr4_3:61503026-61503045 Msa0653470:intron 25.0%
! ATCCTAATATCCTATAAAGA+GGG - chr4_3:61503027-61503046 Msa0653470:intron 25.0%
!! AACAATGTCTACATTTTTGT+AGG + chr4_3:61503096-61503115 None:intergenic 25.0%
! TAATACTGAGACTTACTAAA+TGG - chr4_3:61503186-61503205 Msa0653470:CDS 25.0%
!!! GAAAAAGTTTTATTGATGGA+AGG + chr4_3:61503235-61503254 None:intergenic 25.0%
!!! CCATCAATAAAACTTTTTCT+CGG - chr4_3:61503236-61503255 Msa0653470:intron 25.0%
!!! TGGTTGTTGTATTTTAACAT+TGG - chr4_3:61503426-61503445 Msa0653470:intron 25.0%
!! TAAATTAGATTTTCAGCCTA+AGG - chr4_3:61503520-61503539 Msa0653470:intron 25.0%
!! ATCTTATAGGAGATTTTAGA+TGG + chr4_3:61503782-61503801 None:intergenic 25.0%
! AAATAACAATAGCAAGCAAT+GGG + chr4_3:61503851-61503870 None:intergenic 25.0%
! AAAATAACAATAGCAAGCAA+TGG + chr4_3:61503852-61503871 None:intergenic 25.0%
!! TTAACAAAAATATGGTTCTG+GGG + chr4_3:61504220-61504239 None:intergenic 25.0%
! GTTAACAAAAATATGGTTCT+GGG + chr4_3:61504221-61504240 None:intergenic 25.0%
! AGTTAACAAAAATATGGTTC+TGG + chr4_3:61504222-61504241 None:intergenic 25.0%
! AACCGAAGTTAACAAAAATA+TGG + chr4_3:61504228-61504247 None:intergenic 25.0%
!!! TGAACTGAATTTGTTAACAT+TGG + chr4_3:61504345-61504364 None:intergenic 25.0%
! AAATGAATTAGTTCAGAGTT+CGG + chr4_3:61504415-61504434 None:intergenic 25.0%
!!! TTCCTCATATTTTTTCTGTT+AGG - chr4_3:61504562-61504581 Msa0653470:CDS 25.0%
!!! ATTTTTTCTGTTAGGCAATT+TGG - chr4_3:61504570-61504589 Msa0653470:CDS 25.0%
!!! AAAGTTCTGATATTTTATCC+TGG + chr4_3:61504599-61504618 None:intergenic 25.0%
! AGTAAACCACATATATAGAA+GGG + chr4_3:61504632-61504651 None:intergenic 25.0%
! TAGTAAACCACATATATAGA+AGG + chr4_3:61504633-61504652 None:intergenic 25.0%
!!! TACTATTCTTATTTTTGAGG+AGG - chr4_3:61504648-61504667 Msa0653470:CDS 25.0%
!!! ACTATTCTTATTTTTGAGGA+GGG - chr4_3:61504649-61504668 Msa0653470:CDS 25.0%
! TCATCTACTAAATGAAATCT+GGG - chr4_3:61504704-61504723 Msa0653470:CDS 25.0%
!! AAGAACGAATTTTCCATTTT+AGG - chr4_3:61504901-61504920 Msa0653470:intron 25.0%
! TCCATAATCAAATTCTATAC+TGG - chr4_3:61505335-61505354 Msa0653470:intron 25.0%
!!! CTATTTTTGTTATGTGAATC+AGG - chr4_3:61505489-61505508 Msa0653470:intron 25.0%
! TAATACAATGGTACAAAATG+TGG + chr4_3:61505796-61505815 None:intergenic 25.0%
! AATTCTCAATTTCATTAGGT+TGG + chr4_3:61506001-61506020 None:intergenic 25.0%
!!! ACAGGTCCTTTTTTTTTAAT+TGG - chr4_3:61506076-61506095 Msa0653470:five_prime_UTR 25.0%
! TAACTCAACAAAAAAACTAG+GGG + chr4_3:61506258-61506277 None:intergenic 25.0%
! CATAACTCAACAAAAAAACT+AGG + chr4_3:61506260-61506279 None:intergenic 25.0%
!! GAATTGTAGTATTGATTAGG+GGG + chr4_3:61496632-61496651 None:intergenic 30.0%
AGGCACAAATTGATTGAATT+AGG - chr4_3:61496670-61496689 Msa0653470:three_prime_UTR 30.0%
GGCACAAATTGATTGAATTA+GGG - chr4_3:61496671-61496690 Msa0653470:three_prime_UTR 30.0%
CAATTCACGGATCTAAAAAT+TGG - chr4_3:61496765-61496784 Msa0653470:three_prime_UTR 30.0%
ATCATAATTGGCGTCAAAAT+CGG + chr4_3:61496842-61496861 None:intergenic 30.0%
TATAAATCAGTGGTGTATCA+AGG - chr4_3:61496931-61496950 Msa0653470:three_prime_UTR 30.0%
ATAAATCAGTGGTGTATCAA+GGG - chr4_3:61496932-61496951 Msa0653470:three_prime_UTR 30.0%
!! GAACAAGAATTTTGATGTGA+AGG - chr4_3:61497014-61497033 Msa0653470:three_prime_UTR 30.0%
TACTACTGTTTGCTTCAAAA+TGG - chr4_3:61497104-61497123 Msa0653470:three_prime_UTR 30.0%
! TCACTTAAACCCTATGATTT+TGG - chr4_3:61497243-61497262 Msa0653470:CDS 30.0%
GAGATTTAGTCCAAAATCAT+AGG + chr4_3:61497256-61497275 None:intergenic 30.0%
! TCAGCTTTAGCAAAAAAAAC+TGG + chr4_3:61497517-61497536 None:intergenic 30.0%
!! TTGATAGTGAAATTAGTGTC+TGG - chr4_3:61497548-61497567 Msa0653470:intron 30.0%
! TGATAGTGAAATTAGTGTCT+GGG - chr4_3:61497549-61497568 Msa0653470:intron 30.0%
! TACTTAAATTTACCGGTTAC+CGG - chr4_3:61497835-61497854 Msa0653470:CDS 30.0%
ATATGGAAAATAAAGGTGAC+CGG + chr4_3:61497876-61497895 None:intergenic 30.0%
ATTAATAATTGTCGCGATGT+TGG - chr4_3:61497914-61497933 Msa0653470:intron 30.0%
GTTGTTAAATCTCAGATGTT+TGG - chr4_3:61498068-61498087 Msa0653470:intron 30.0%
!! AATGATCAGGTAGTTGATAA+CGG - chr4_3:61498273-61498292 Msa0653470:intron 30.0%
AAGAAAAGATCATATACCTG+CGG + chr4_3:61498414-61498433 None:intergenic 30.0%
! CAGAATCATTAGTCTAACAA+AGG - chr4_3:61498754-61498773 Msa0653470:CDS 30.0%
!! ACAAATTTTGGTGAAGTTCT+AGG + chr4_3:61499203-61499222 None:intergenic 30.0%
TCCTTGAACTTCTAAATAGT+AGG - chr4_3:61499249-61499268 Msa0653470:intron 30.0%
ACCTACTATTTAGAAGTTCA+AGG + chr4_3:61499253-61499272 None:intergenic 30.0%
AATAGTAGGTCCATGTAATT+TGG - chr4_3:61499263-61499282 Msa0653470:intron 30.0%
ATAGTAGGTCCATGTAATTT+GGG - chr4_3:61499264-61499283 Msa0653470:intron 30.0%
! AAGTAATTTGTAGCATGGTA+TGG + chr4_3:61499291-61499310 None:intergenic 30.0%
! AAATGTTGCTTGCAATGTTA+GGG - chr4_3:61499889-61499908 Msa0653470:intron 30.0%
ATCTGTATACTGAAATGAAG+GGG - chr4_3:61499954-61499973 Msa0653470:intron 30.0%
! TTGTTGTTGTTGTAGTTTAG+AGG - chr4_3:61500142-61500161 Msa0653470:intron 30.0%
AAAATCAGAGTCGTAATTAG+GGG + chr4_3:61500231-61500250 None:intergenic 30.0%
CAAAATCAGAGTCGTAATTA+GGG + chr4_3:61500232-61500251 None:intergenic 30.0%
ACAAAATCAGAGTCGTAATT+AGG + chr4_3:61500233-61500252 None:intergenic 30.0%
TGAGGTAGAAAGAAAATTGA+AGG - chr4_3:61500584-61500603 Msa0653470:intron 30.0%
ATGTAATTGTACTTTCTGCT+AGG - chr4_3:61500675-61500694 Msa0653470:intron 30.0%
TTCTTCTCTTCAGTATACAA+TGG - chr4_3:61500759-61500778 Msa0653470:CDS 30.0%
TATGCAAGCTTGATTCTAAA+GGG + chr4_3:61500894-61500913 None:intergenic 30.0%
GAATCTACAAGCATTTCTTT+AGG + chr4_3:61501150-61501169 None:intergenic 30.0%
AAAGAAATGCTTGTAGATTC+TGG - chr4_3:61501150-61501169 Msa0653470:intron 30.0%
ATCATTTGATGTCTTACAAG+TGG - chr4_3:61501309-61501328 Msa0653470:intron 30.0%
CAGATAACGAATGATAACTA+GGG + chr4_3:61501429-61501448 None:intergenic 30.0%
ACAGAAAAATTATATGGTCG+TGG + chr4_3:61501725-61501744 None:intergenic 30.0%
ATGAGATATTGTCACTCTAA+GGG + chr4_3:61501915-61501934 None:intergenic 30.0%
TCATGCAAACATATAGAACA+AGG + chr4_3:61502304-61502323 None:intergenic 30.0%
!!! TTTTTTAATCGGTGAACGTT+CGG - chr4_3:61502393-61502412 Msa0653470:intron 30.0%
!! ACCAAATATTTGACTTTTCC+AGG - chr4_3:61502489-61502508 Msa0653470:CDS 30.0%
TCCTGGAAAAGTCAAATATT+TGG + chr4_3:61502493-61502512 None:intergenic 30.0%
!! ATATTTGACTTTTCCAGGAT+TGG - chr4_3:61502494-61502513 Msa0653470:CDS 30.0%
!! TATTTGACTTTTCCAGGATT+GGG - chr4_3:61502495-61502514 Msa0653470:CDS 30.0%
GATTCTATTAAACATTTGGC+AGG - chr4_3:61502789-61502808 Msa0653470:intron 30.0%
AGTCACAAACTTCCAAAATT+AGG + chr4_3:61502824-61502843 None:intergenic 30.0%
TCCTAATATCCTATAAAGAG+GGG - chr4_3:61503028-61503047 Msa0653470:intron 30.0%
AAGAAAAAACCCCTCTTTAT+AGG + chr4_3:61503040-61503059 None:intergenic 30.0%
AAATTCAGAACATCAAAAGC+AGG - chr4_3:61503133-61503152 Msa0653470:CDS 30.0%
AATTCAGAACATCAAAAGCA+GGG - chr4_3:61503134-61503153 Msa0653470:CDS 30.0%
!!! CCGAGAAAAAGTTTTATTGA+TGG + chr4_3:61503239-61503258 None:intergenic 30.0%
! AAACTTGAGAGAGTTTTCAA+TGG + chr4_3:61503342-61503361 None:intergenic 30.0%
ACTTTCTCTCTCATGTTTAA+TGG + chr4_3:61503383-61503402 None:intergenic 30.0%
AGGTTCAAAATCTTGACATT+TGG + chr4_3:61503479-61503498 None:intergenic 30.0%
! GTTTCAACTTTTAGTAGAGA+TGG - chr4_3:61503650-61503669 Msa0653470:intron 30.0%
ATGGTCCAATTATCTTTGTA+TGG - chr4_3:61503669-61503688 Msa0653470:intron 30.0%
TGGTCCAATTATCTTTGTAT+GGG - chr4_3:61503670-61503689 Msa0653470:intron 30.0%
CATACCCATACAAAGATAAT+TGG + chr4_3:61503677-61503696 None:intergenic 30.0%
AGGATAGTTATCTTCATACA+TGG - chr4_3:61503718-61503737 Msa0653470:intron 30.0%
TCATACATGGTTAAATTCTG+AGG - chr4_3:61503731-61503750 Msa0653470:intron 30.0%
TTATGATGCTAGGATCTTAT+AGG + chr4_3:61503795-61503814 None:intergenic 30.0%
GTCTAGAAAAACAACCAAAA+AGG + chr4_3:61503934-61503953 None:intergenic 30.0%
CATATATTTATCACGTGCTA+AGG - chr4_3:61503953-61503972 Msa0653470:CDS 30.0%
TTTCCTAATGCAAATGACAA+CGG - chr4_3:61504011-61504030 Msa0653470:intron 30.0%
! TGAAGTTTGTGTTTCTAACA+TGG - chr4_3:61504247-61504266 Msa0653470:intron 30.0%
! TTATTTTCTTCAGTGCATGA+TGG - chr4_3:61504284-61504303 Msa0653470:intron 30.0%
!!! TCTTGGTGTCAATTTTCTAT+CGG - chr4_3:61504311-61504330 Msa0653470:intron 30.0%
!!! TGTTTTAGTTCAGTCATTTG+AGG - chr4_3:61504491-61504510 Msa0653470:CDS 30.0%
!!! GTTTTAGTTCAGTCATTTGA+GGG - chr4_3:61504492-61504511 Msa0653470:CDS 30.0%
!!! TTTTAGTTCAGTCATTTGAG+GGG - chr4_3:61504493-61504512 Msa0653470:CDS 30.0%
TGCCTAACAGAAAAAATATG+AGG + chr4_3:61504567-61504586 None:intergenic 30.0%
ATTTCTCCCTTCTATATATG+TGG - chr4_3:61504623-61504642 Msa0653470:CDS 30.0%
CTCATCTACTAAATGAAATC+TGG - chr4_3:61504703-61504722 Msa0653470:CDS 30.0%
TTATAATGGTAACAAAGCTC+TGG - chr4_3:61504870-61504889 Msa0653470:intron 30.0%
ACTTTCTTACATATTGGTGT+TGG - chr4_3:61505058-61505077 Msa0653470:intron 30.0%
TAAGATGTATTTCGTTCTTC+AGG - chr4_3:61505086-61505105 Msa0653470:intron 30.0%
TTTCTAAATCTAGCACAAAG+TGG - chr4_3:61505283-61505302 Msa0653470:intron 30.0%
GCCAGTATAGAATTTGATTA+TGG + chr4_3:61505339-61505358 None:intergenic 30.0%
!! TTACTGATTCAACAATGTGA+AGG - chr4_3:61505687-61505706 Msa0653470:CDS 30.0%
!! TACTGATTCAACAATGTGAA+GGG - chr4_3:61505688-61505707 Msa0653470:CDS 30.0%
!! AATGTGGTGTTGTTCTATAT+TGG + chr4_3:61505780-61505799 None:intergenic 30.0%
GTAAGATAATCACATCTTGA+TGG - chr4_3:61505861-61505880 Msa0653470:exon 30.0%
!! TCAATTTCATTAGGTTGGTT+TGG + chr4_3:61505996-61506015 None:intergenic 30.0%
! TTAATAACGGAGTCTTTAGA+GGG + chr4_3:61506154-61506173 None:intergenic 30.0%
! ATTTCTGACCTTTCGTTTTC+TGG - chr4_3:61496515-61496534 Msa0653470:three_prime_UTR 35.0%
TGATTAGGGTTTGAAGATTG+GGG + chr4_3:61496603-61496622 None:intergenic 35.0%
GTGATTAGGGTTTGAAGATT+GGG + chr4_3:61496604-61496623 None:intergenic 35.0%
TCAATCGGAGATTCAAAATC+AGG - chr4_3:61496650-61496669 Msa0653470:three_prime_UTR 35.0%
! TGAATTGAAAGTGATGGTGA+CGG + chr4_3:61496752-61496771 None:intergenic 35.0%
TCACCATCACTTTCAATTCA+CGG - chr4_3:61496752-61496771 Msa0653470:three_prime_UTR 35.0%
TAAATCAGTGGTGTATCAAG+GGG - chr4_3:61496933-61496952 Msa0653470:three_prime_UTR 35.0%
! TGATGTTGTTGTTCACTTCT+GGG + chr4_3:61496987-61497006 None:intergenic 35.0%
! TTGATGTTGTTGTTCACTTC+TGG + chr4_3:61496988-61497007 None:intergenic 35.0%
ATAGTATGAAGAACAGCAAG+TGG + chr4_3:61497084-61497103 None:intergenic 35.0%
! GATTTTGGACTAAATCTCAC+AGG - chr4_3:61497258-61497277 Msa0653470:CDS 35.0%
!!! GTTGTTTTGATGAACTCAGA+TGG - chr4_3:61497379-61497398 Msa0653470:intron 35.0%
!! AACTCAGATGGTGGAAAAAT+TGG - chr4_3:61497391-61497410 Msa0653470:intron 35.0%
ACTGAGACTCCCAATTAATT+GGG - chr4_3:61497448-61497467 Msa0653470:intron 35.0%
TTTAATACACTTTCGACCGT+CGG + chr4_3:61497632-61497651 None:intergenic 35.0%
TTTGGCACTGCATGATTATT+TGG - chr4_3:61497750-61497769 Msa0653470:intron 35.0%
ACTTAAATTTACGCGGTTAC+TGG - chr4_3:61497811-61497830 Msa0653470:intron 35.0%
TGTAATTCTTCCCCATACAT+CGG + chr4_3:61497961-61497980 None:intergenic 35.0%
GTATGGGGAAGAATTACATT+TGG - chr4_3:61497963-61497982 Msa0653470:intron 35.0%
ATTTGGTTGCAATGCATTCA+CGG - chr4_3:61497980-61497999 Msa0653470:intron 35.0%
ACAATAAATCCCCAGAAACA+AGG + chr4_3:61498018-61498037 None:intergenic 35.0%
AGACGAATTATAAAGTCCTG+TGG + chr4_3:61498043-61498062 None:intergenic 35.0%
TTTGGGTATAGTGTTTGATC+TGG - chr4_3:61498086-61498105 Msa0653470:intron 35.0%
! CATTGTATTTGCTACGACAA+GGG + chr4_3:61498118-61498137 None:intergenic 35.0%
TCAATATACTCTTGTCCTCT+TGG + chr4_3:61498239-61498258 None:intergenic 35.0%
! TTTTCATGTAACCGTATCAG+CGG + chr4_3:61498366-61498385 None:intergenic 35.0%
! GCATAATTTTGTCCTTCAGT+AGG + chr4_3:61498615-61498634 None:intergenic 35.0%
!! TGAGGTTTTTGTTTGCACAA+TGG - chr4_3:61498880-61498899 Msa0653470:intron 35.0%
AAAAACAAGCACGCCATTTA+CGG + chr4_3:61499014-61499033 None:intergenic 35.0%
! ATTTGTAATAGAGCACCTGA+AGG - chr4_3:61499071-61499090 Msa0653470:intron 35.0%
!! TTGGGCCCCTAAATTTTAAT+TGG - chr4_3:61499225-61499244 Msa0653470:intron 35.0%
GTAATAAGGTCTCTGAACTT+AGG + chr4_3:61499377-61499396 None:intergenic 35.0%
AGAGATGCAAATCATTGTAC+TGG - chr4_3:61499494-61499513 Msa0653470:intron 35.0%
TTGTTCAATGTCTTCCAAGA+TGG - chr4_3:61499597-61499616 Msa0653470:intron 35.0%
TCAATTACTAACGCCATCTT+TGG + chr4_3:61499633-61499652 None:intergenic 35.0%
! GAAATGTTGCTTGCAATGTT+AGG - chr4_3:61499888-61499907 Msa0653470:intron 35.0%
! AATGTTGCTTGCAATGTTAG+GGG - chr4_3:61499890-61499909 Msa0653470:intron 35.0%
! GATATTTTCCAGGTTATGCA+GGG + chr4_3:61500004-61500023 None:intergenic 35.0%
! AGATATTTTCCAGGTTATGC+AGG + chr4_3:61500005-61500024 None:intergenic 35.0%
! AAATGAGTTGGAGAAAGACA+TGG - chr4_3:61500047-61500066 Msa0653470:CDS 35.0%
! ATGGTTTTTGATAGAACGCT+AGG - chr4_3:61500066-61500085 Msa0653470:CDS 35.0%
! TGGTTTTTGATAGAACGCTA+GGG - chr4_3:61500067-61500086 Msa0653470:CDS 35.0%
! TACGACTCTGATTTTGTGAT+AGG - chr4_3:61500236-61500255 Msa0653470:intron 35.0%
! ACGACTCTGATTTTGTGATA+GGG - chr4_3:61500237-61500256 Msa0653470:intron 35.0%
!! TGTGATAGGGATTTTGATGA+TGG - chr4_3:61500250-61500269 Msa0653470:intron 35.0%
TCATCTTCATAGGCAATTTG+AGG + chr4_3:61500292-61500311 None:intergenic 35.0%
! GAGCAATTATCTAGTTTCAG+AGG - chr4_3:61500342-61500361 Msa0653470:intron 35.0%
! ACTGTATGTTTGACTTCTAC+AGG - chr4_3:61500500-61500519 Msa0653470:intron 35.0%
AAACGGATCTCTATTTCCAT+AGG + chr4_3:61500541-61500560 None:intergenic 35.0%
!! AGAGATCCGTTTTTGTTTGA+TGG - chr4_3:61500549-61500568 Msa0653470:CDS 35.0%
GACATAAATCACAGTTCACT+CGG + chr4_3:61500624-61500643 None:intergenic 35.0%
TCTAACTTAGCAGTTGTCAT+AGG + chr4_3:61500727-61500746 None:intergenic 35.0%
AATTGTATCATAGATGCGTG+TGG + chr4_3:61500814-61500833 None:intergenic 35.0%
! ATGCAAGCTTGATTCTAAAG+GGG + chr4_3:61500893-61500912 None:intergenic 35.0%
CTATGCAAGCTTGATTCTAA+AGG + chr4_3:61500895-61500914 None:intergenic 35.0%
! TCAACCATCCTTTTTCTCTA+AGG - chr4_3:61501203-61501222 Msa0653470:intron 35.0%
TCAACCTTAGAGAAAAAGGA+TGG + chr4_3:61501210-61501229 None:intergenic 35.0%
!!! TCCTTTTTCTCTAAGGTTGA+TGG - chr4_3:61501210-61501229 Msa0653470:intron 35.0%
AACATAGTCATTACCTCCTT+TGG + chr4_3:61501282-61501301 None:intergenic 35.0%
! TTACAAGTGGCTCAAACTTT+TGG - chr4_3:61501322-61501341 Msa0653470:intron 35.0%
! AATGATAACTAGGGAGCATA+TGG + chr4_3:61501420-61501439 None:intergenic 35.0%
CCAGATAACGAATGATAACT+AGG + chr4_3:61501430-61501449 None:intergenic 35.0%
CCTAGTTATCATTCGTTATC+TGG - chr4_3:61501427-61501446 Msa0653470:intron 35.0%
AATACTTGTCCCTACATGTT+TGG - chr4_3:61501458-61501477 Msa0653470:intron 35.0%
GAGAATCAACCAAACATGTA+GGG + chr4_3:61501470-61501489 None:intergenic 35.0%
AGAGAATCAACCAAACATGT+AGG + chr4_3:61501471-61501490 None:intergenic 35.0%
TACATGAGAAGCAAATGCTT+GGG + chr4_3:61501505-61501524 None:intergenic 35.0%
TGACTGTGACTGCATTTATT+TGG - chr4_3:61501538-61501557 Msa0653470:CDS 35.0%
! GAAGTCACTTTAATTCAGCA+TGG + chr4_3:61501609-61501628 None:intergenic 35.0%
AGGTAAATCAAGGAAGACAA+AGG + chr4_3:61501776-61501795 None:intergenic 35.0%
! TCCTTGATTTACCTTTTCAC+TGG - chr4_3:61501782-61501801 Msa0653470:CDS 35.0%
TCCAGTGAAAAGGTAAATCA+AGG + chr4_3:61501786-61501805 None:intergenic 35.0%
ATGCTTTATGTCCAGTGAAA+AGG + chr4_3:61501796-61501815 None:intergenic 35.0%
CATGAGATATTGTCACTCTA+AGG + chr4_3:61501916-61501935 None:intergenic 35.0%
CTTAGAGTGACAATATCTCA+TGG - chr4_3:61501914-61501933 Msa0653470:CDS 35.0%
ATTTCCTGTAATACTGCAAC+TGG + chr4_3:61502040-61502059 None:intergenic 35.0%
TCAGAAGCAAAGAAACATGT+TGG + chr4_3:61502183-61502202 None:intergenic 35.0%
GGTGGAATATACATCATCTT+TGG - chr4_3:61502211-61502230 Msa0653470:CDS 35.0%
! AATTTCTAGGTTTGTTTCCC+CGG + chr4_3:61502558-61502577 None:intergenic 35.0%
TTAATTGATCTTTCGGTTGG+TGG - chr4_3:61502577-61502596 Msa0653470:intron 35.0%
TGATTCCATCTTACTTCCTT+TGG - chr4_3:61502608-61502627 Msa0653470:intron 35.0%
TCAACTAATGACTACTCCAA+AGG + chr4_3:61502627-61502646 None:intergenic 35.0%
TAAGTGTCACCATTATTTGC+AGG - chr4_3:61502692-61502711 Msa0653470:intron 35.0%
!! TGGTTTTCTGGGAAAAAAGT+TGG - chr4_3:61502717-61502736 Msa0653470:intron 35.0%
CTATTAAACATTTGGCAGGT+AGG - chr4_3:61502793-61502812 Msa0653470:intron 35.0%
! AGGTAGGACATTCCTAATTT+TGG - chr4_3:61502809-61502828 Msa0653470:intron 35.0%
ACCCCTCTTTATAGGATATT+AGG + chr4_3:61503032-61503051 None:intergenic 35.0%
TTACAAGACTCTGCTATCTA+AGG - chr4_3:61503058-61503077 Msa0653470:intron 35.0%
! CATTTTTGTAGGAACAACAC+CGG + chr4_3:61503085-61503104 None:intergenic 35.0%
AGTCTCAGTATTAACCCAAT+GGG + chr4_3:61503179-61503198 None:intergenic 35.0%
AAGTCTCAGTATTAACCCAA+TGG + chr4_3:61503180-61503199 None:intergenic 35.0%
!! TACAGATCGAGCTTTTTAAG+AGG - chr4_3:61503302-61503321 Msa0653470:intron 35.0%
!! ACAGATCGAGCTTTTTAAGA+GGG - chr4_3:61503303-61503322 Msa0653470:intron 35.0%
TATTATCCTTGCTTCAAGCT+TGG - chr4_3:61503557-61503576 Msa0653470:intron 35.0%
ATTACATGGCAGCCAAAAAA+TGG + chr4_3:61503629-61503648 None:intergenic 35.0%
! TAACCGTTGTCATTTGCATT+AGG + chr4_3:61504017-61504036 None:intergenic 35.0%
GTTGGAAGTTAAGAGATCAA+CGG - chr4_3:61504136-61504155 Msa0653470:intron 35.0%
TTGGAAGTTAAGAGATCAAC+GGG - chr4_3:61504137-61504156 Msa0653470:intron 35.0%
GAATCTCACCAATTCTTTGA+GGG + chr4_3:61504174-61504193 None:intergenic 35.0%
TGAATCTCACCAATTCTTTG+AGG + chr4_3:61504175-61504194 None:intergenic 35.0%
!! GAATTTGTTAACATTGGAGC+AGG + chr4_3:61504339-61504358 None:intergenic 35.0%
ATAACCATTCTGCGATTCAA+TGG + chr4_3:61504451-61504470 None:intergenic 35.0%
ATGACTGAACTAAAACACAC+AGG + chr4_3:61504488-61504507 None:intergenic 35.0%
ACTAAATGAAATCTGGGCTT+AGG - chr4_3:61504710-61504729 Msa0653470:CDS 35.0%
TGGGGTAGTAATCTTGTTAA+TGG - chr4_3:61504735-61504754 Msa0653470:CDS 35.0%
TCTTGTTAATGGTGTACTTG+TGG - chr4_3:61504746-61504765 Msa0653470:CDS 35.0%
CCATCTATCTCAACCTAAAA+TGG + chr4_3:61504917-61504936 None:intergenic 35.0%
!!! CCATTTTAGGTTGAGATAGA+TGG - chr4_3:61504914-61504933 Msa0653470:intron 35.0%
TGTGCTAGATTTAGAAAGCA+CGG + chr4_3:61505280-61505299 None:intergenic 35.0%
TCAAATTCTATACTGGCCAA+TGG - chr4_3:61505342-61505361 Msa0653470:intron 35.0%
TTATTCGAGAATCCCTGAAA+TGG + chr4_3:61505515-61505534 None:intergenic 35.0%
! AATCCTGTTTCTCTTGTCAA+GGG + chr4_3:61505616-61505635 None:intergenic 35.0%
! AAATCCTGTTTCTCTTGTCA+AGG + chr4_3:61505617-61505636 None:intergenic 35.0%
TTACTGGTATGACTGTTGTT+GGG - chr4_3:61505647-61505666 Msa0653470:CDS 35.0%
! TTCTATATTGGCATTGAGCT+CGG + chr4_3:61505768-61505787 None:intergenic 35.0%
TTCAGTGGAGGATAATACAA+TGG + chr4_3:61505808-61505827 None:intergenic 35.0%
ATTATCCTCCACTGAAATAG+AGG - chr4_3:61505812-61505831 Msa0653470:CDS 35.0%
! CAACCAATACTCCATTGATT+GGG + chr4_3:61505888-61505907 None:intergenic 35.0%
CATCATCTTGTCTTGTAAAC+CGG + chr4_3:61505934-61505953 None:intergenic 35.0%
GTTTACAAGACAAGATGATG+AGG - chr4_3:61505934-61505953 Msa0653470:five_prime_UTR 35.0%
AAAAAAGGACCTGTACTGAA+TGG + chr4_3:61506070-61506089 None:intergenic 35.0%
!!! CTTTTTTCGCTAACATAACC+CGG - chr4_3:61506105-61506124 Msa0653470:five_prime_UTR 35.0%
! TAATAACGGAGTCTTTAGAG+GGG + chr4_3:61506153-61506172 None:intergenic 35.0%
! GTTAATAACGGAGTCTTTAG+AGG + chr4_3:61506155-61506174 None:intergenic 35.0%
CCTCAAGACTCTGTTAATAA+CGG + chr4_3:61506167-61506186 None:intergenic 35.0%
TATTAACAGAGTCTTGAGGT+TGG - chr4_3:61506168-61506187 Msa0653470:five_prime_UTR 35.0%
! ACCTTTCGTTTTCTGGATCT+AGG - chr4_3:61496522-61496541 Msa0653470:three_prime_UTR 40.0%
! CCTTTCGTTTTCTGGATCTA+GGG - chr4_3:61496523-61496542 Msa0653470:three_prime_UTR 40.0%
GGTGATTAGGGTTTGAAGAT+TGG + chr4_3:61496605-61496624 None:intergenic 40.0%
!! TTGTAGTATTGATTAGGGGG+AGG + chr4_3:61496629-61496648 None:intergenic 40.0%
GATCCGTGAATTGAAAGTGA+TGG + chr4_3:61496758-61496777 None:intergenic 40.0%
! ACTTTTCTCAACCTAGTGAG+AGG - chr4_3:61497052-61497071 Msa0653470:three_prime_UTR 40.0%
CTTGTTCTCTCTGATACACA+AGG + chr4_3:61497172-61497191 None:intergenic 40.0%
CTTGTGTATCAGAGAGAACA+AGG - chr4_3:61497170-61497189 Msa0653470:exon 40.0%
!! GTTTTGATGAACTCAGATGG+TGG - chr4_3:61497382-61497401 Msa0653470:intron 40.0%
CAATTAATTGGGAGTCTCAG+TGG + chr4_3:61497449-61497468 None:intergenic 40.0%
CACTGAGACTCCCAATTAAT+TGG - chr4_3:61497447-61497466 Msa0653470:intron 40.0%
CTGAGACTCCCAATTAATTG+GGG - chr4_3:61497449-61497468 Msa0653470:intron 40.0%
! GCATTGTATTTGCTACGACA+AGG + chr4_3:61498119-61498138 None:intergenic 40.0%
AAATACAATGCGCTCATTCG+AGG - chr4_3:61498128-61498147 Msa0653470:intron 40.0%
!! CCTCAGAGTTTACTTTTCTC+TGG + chr4_3:61498170-61498189 None:intergenic 40.0%
CCAGAGAAAAGTAAACTCTG+AGG - chr4_3:61498167-61498186 Msa0653470:intron 40.0%
GTAGATCCACAACGAATTTC+TGG - chr4_3:61498189-61498208 Msa0653470:intron 40.0%
GCAGTATGCTGAAAATGATC+AGG - chr4_3:61498260-61498279 Msa0653470:intron 40.0%
AGATAATGCTGGAACAAGCT+CGG + chr4_3:61498319-61498338 None:intergenic 40.0%
TGATGACTGTCAGATAATGC+TGG + chr4_3:61498330-61498349 None:intergenic 40.0%
ATGTTACGATCCACGAATTC+CGG + chr4_3:61498582-61498601 None:intergenic 40.0%
ATGGATCAAGATCCTACTGA+AGG - chr4_3:61498600-61498619 Msa0653470:intron 40.0%
TTACGCATGTGTGTATGTGT+AGG + chr4_3:61498637-61498656 None:intergenic 40.0%
TTGTTTGCACAATGGCTGAA+AGG - chr4_3:61498888-61498907 Msa0653470:intron 40.0%
TGTTTGCACAATGGCTGAAA+GGG - chr4_3:61498889-61498908 Msa0653470:intron 40.0%
! AGGGGCCCAATTACAAATTT+TGG + chr4_3:61499215-61499234 None:intergenic 40.0%
TGGTATGGTCCCAAATTACA+TGG + chr4_3:61499276-61499295 None:intergenic 40.0%
ATCAGAAGTAGCAGAAACAC+GGG + chr4_3:61499520-61499539 None:intergenic 40.0%
CATCAGAAGTAGCAGAAACA+CGG + chr4_3:61499521-61499540 None:intergenic 40.0%
TTACTAACGCCATCTTTGGA+TGG + chr4_3:61499629-61499648 None:intergenic 40.0%
AGCAAATTTACCTCAGCTTG+AGG + chr4_3:61499732-61499751 None:intergenic 40.0%
TCAAGCTGAGGTAAATTTGC+TGG - chr4_3:61499731-61499750 Msa0653470:intron 40.0%
TTCTTGCAACGCATAAGACA+GGG + chr4_3:61499871-61499890 None:intergenic 40.0%
TTTCTTGCAACGCATAAGAC+AGG + chr4_3:61499872-61499891 None:intergenic 40.0%
TAGATAATTGCTCACGTCAG+GGG + chr4_3:61500335-61500354 None:intergenic 40.0%
CTAGATAATTGCTCACGTCA+GGG + chr4_3:61500336-61500355 None:intergenic 40.0%
ACTAGATAATTGCTCACGTC+AGG + chr4_3:61500337-61500356 None:intergenic 40.0%
!! TCCGTTTTTGTTTGATGGCA+TGG - chr4_3:61500554-61500573 Msa0653470:CDS 40.0%
GCCATGCCATCAAACAAAAA+CGG + chr4_3:61500558-61500577 None:intergenic 40.0%
ATAAATCACAGTTCACTCGG+AGG + chr4_3:61500621-61500640 None:intergenic 40.0%
CAGTATACAATGGTATCTCC+TGG - chr4_3:61500769-61500788 Msa0653470:CDS 40.0%
!! ACTTGAACCATTGGCTTTAC+TGG + chr4_3:61500868-61500887 None:intergenic 40.0%
CAGAATTAGACCCAGATACA+AGG - chr4_3:61500950-61500969 Msa0653470:intron 40.0%
AGGCTTCTCATATTGCAACA+TGG - chr4_3:61500976-61500995 Msa0653470:intron 40.0%
TGCAACATGGACAAGATGTT+AGG - chr4_3:61500989-61501008 Msa0653470:intron 40.0%
GCAACATGGACAAGATGTTA+GGG - chr4_3:61500990-61501009 Msa0653470:intron 40.0%
TTTCCTGTAGAAGAGGAGAT+TGG - chr4_3:61501099-61501118 Msa0653470:intron 40.0%
TCTTTAGGTAGTACCCTGTT+TGG + chr4_3:61501135-61501154 None:intergenic 40.0%
! GAGAAAAAGGATGGTTGATG+AGG + chr4_3:61501201-61501220 None:intergenic 40.0%
GCCATCAACCTTAGAGAAAA+AGG + chr4_3:61501214-61501233 None:intergenic 40.0%
ACATGAGAAGCAAATGCTTG+GGG + chr4_3:61501504-61501523 None:intergenic 40.0%
GTACATGAGAAGCAAATGCT+TGG + chr4_3:61501506-61501525 None:intergenic 40.0%
AGCAAAAGAAACACACACAG+AGG + chr4_3:61501865-61501884 None:intergenic 40.0%
! AGATATTGTCACTCTAAGGG+TGG + chr4_3:61501912-61501931 None:intergenic 40.0%
TCTCATGGTTGTTCTTATGC+AGG - chr4_3:61501929-61501948 Msa0653470:CDS 40.0%
CTCATGGTTGTTCTTATGCA+GGG - chr4_3:61501930-61501949 Msa0653470:CDS 40.0%
TCATGGTTGTTCTTATGCAG+GGG - chr4_3:61501931-61501950 Msa0653470:CDS 40.0%
TAGAAGATGACCTACCAAAG+GGG + chr4_3:61501964-61501983 None:intergenic 40.0%
CTAGAAGATGACCTACCAAA+GGG + chr4_3:61501965-61501984 None:intergenic 40.0%
AACACCAGTTGCAGTATTAC+AGG - chr4_3:61502033-61502052 Msa0653470:CDS 40.0%
TAGAATGAAGGATACCTCGA+TGG + chr4_3:61502261-61502280 None:intergenic 40.0%
! AAGGTATCATGAAGTCATGC+TGG + chr4_3:61502285-61502304 None:intergenic 40.0%
GGTATAGTCTGCAACTATGT+AGG + chr4_3:61502472-61502491 None:intergenic 40.0%
CTACTCCAAAGGAAGTAAGA+TGG + chr4_3:61502616-61502635 None:intergenic 40.0%
TGACACTTACAAGATGACGA+AGG + chr4_3:61502681-61502700 None:intergenic 40.0%
AAAACCACGCCTGCAAATAA+TGG + chr4_3:61502704-61502723 None:intergenic 40.0%
AAAAAAGTTGGCCAGGGATT+TGG - chr4_3:61502729-61502748 Msa0653470:intron 40.0%
! TAGAATGGAAGCGCGATATA+AGG - chr4_3:61502758-61502777 Msa0653470:intron 40.0%
GTCTCAGTATTAACCCAATG+GGG + chr4_3:61503178-61503197 None:intergenic 40.0%
TAAATGGCACAAATAGCCGT+AGG - chr4_3:61503202-61503221 Msa0653470:intron 40.0%
AAATGGCACAAATAGCCGTA+GGG - chr4_3:61503203-61503222 Msa0653470:intron 40.0%
AAGCTCGATCTGTAACGAAA+AGG + chr4_3:61503296-61503315 None:intergenic 40.0%
!! CGAGCTTTTTAAGAGGGATT+TGG - chr4_3:61503309-61503328 Msa0653470:intron 40.0%
! CTCTCTCAAGTTTTCTCAAG+TGG - chr4_3:61503349-61503368 Msa0653470:intron 40.0%
TGCAAATGACAACGGTTATG+TGG - chr4_3:61504019-61504038 Msa0653470:intron 40.0%
GCAAATGACAACGGTTATGT+GGG - chr4_3:61504020-61504039 Msa0653470:intron 40.0%
! GTGGGTAATGTTAGTTCTCT+TGG - chr4_3:61504038-61504057 Msa0653470:intron 40.0%
! CTAGGATCTAAAACCCTTGA+TGG + chr4_3:61504116-61504135 None:intergenic 40.0%
!!! CATCAAGGGTTTTAGATCCT+AGG - chr4_3:61504114-61504133 Msa0653470:intron 40.0%
!!! AAGGGTTTTAGATCCTAGGT+TGG - chr4_3:61504118-61504137 Msa0653470:intron 40.0%
GATCTCTTAACTTCCAACCT+AGG + chr4_3:61504134-61504153 None:intergenic 40.0%
! TTTTCTTCAGTGCATGATGG+AGG - chr4_3:61504287-61504306 Msa0653470:intron 40.0%
! TTTCTTCAGTGCATGATGGA+GGG - chr4_3:61504288-61504307 Msa0653470:intron 40.0%
GAAAGATGAAGTATACGCAC+AGG - chr4_3:61504365-61504384 Msa0653470:intron 40.0%
! TTGGTAACCAAATACCTCAG+TGG - chr4_3:61504388-61504407 Msa0653470:CDS 40.0%
AATGCCATTGAATCGCAGAA+TGG - chr4_3:61504444-61504463 Msa0653470:CDS 40.0%
! GAGAGACATTTTGTTGACGT+TGG - chr4_3:61504535-61504554 Msa0653470:CDS 40.0%
ATGAAATCTGGGCTTAGGTA+TGG - chr4_3:61504715-61504734 Msa0653470:CDS 40.0%
TGAAATCTGGGCTTAGGTAT+GGG - chr4_3:61504716-61504735 Msa0653470:CDS 40.0%
TCATCCTTCATAAGCACCAT+GGG + chr4_3:61504772-61504791 None:intergenic 40.0%
GTGCTTGGTTAAACATTTCC+AGG + chr4_3:61504795-61504814 None:intergenic 40.0%
! CCAGAACTAAACAAAGTGCT+TGG + chr4_3:61504810-61504829 None:intergenic 40.0%
! CCAAGCACTTTGTTTAGTTC+TGG - chr4_3:61504807-61504826 Msa0653470:CDS 40.0%
TAAAGGGACCGGATTAACAT+GGG - chr4_3:61504949-61504968 Msa0653470:intron 40.0%
GGAAGTCTAAGAACAATGCA+TGG - chr4_3:61505126-61505145 Msa0653470:intron 40.0%
! TTTAGAAAGCACGGCACATT+TGG + chr4_3:61505271-61505290 None:intergenic 40.0%
AGATGCCAATTCTGTCTGTA+GGG + chr4_3:61505377-61505396 None:intergenic 40.0%
TAGATGCCAATTCTGTCTGT+AGG + chr4_3:61505378-61505397 None:intergenic 40.0%
TATGTGAATCAGGCCATTTC+AGG - chr4_3:61505499-61505518 Msa0653470:intron 40.0%
ATGTGAATCAGGCCATTTCA+GGG - chr4_3:61505500-61505519 Msa0653470:intron 40.0%
CATCTTCTGGTAGATATCCT+AGG - chr4_3:61505576-61505595 Msa0653470:intron 40.0%
AATCCCTTGACAAGAGAAAC+AGG - chr4_3:61505610-61505629 Msa0653470:CDS 40.0%
! GGATTTTCAGTCTCACTTAC+TGG - chr4_3:61505631-61505650 Msa0653470:CDS 40.0%
CTTACTGGTATGACTGTTGT+TGG - chr4_3:61505646-61505665 Msa0653470:CDS 40.0%
TACTGGTATGACTGTTGTTG+GGG - chr4_3:61505648-61505667 Msa0653470:CDS 40.0%
TGATTCAACAATGTGAAGGG+TGG - chr4_3:61505691-61505710 Msa0653470:CDS 40.0%
TGGGACCATTTCAACTTAAG+TGG - chr4_3:61505726-61505745 Msa0653470:CDS 40.0%
GGGACCATTTCAACTTAAGT+GGG - chr4_3:61505727-61505746 Msa0653470:CDS 40.0%
CCATTTCAACTTAAGTGGGT+CGG - chr4_3:61505731-61505750 Msa0653470:CDS 40.0%
! ATCTTGATGGTCCCAATCAA+TGG - chr4_3:61505874-61505893 Msa0653470:five_prime_UTR 40.0%
GCAACCAATACTCCATTGAT+TGG + chr4_3:61505889-61505908 None:intergenic 40.0%
CTAGTACAACCATTCAGTAC+AGG - chr4_3:61506058-61506077 Msa0653470:five_prime_UTR 40.0%
CCGTTATTAACAGAGTCTTG+AGG - chr4_3:61506164-61506183 Msa0653470:five_prime_UTR 40.0%
CCCTAGATCCAGAAAACGAA+AGG + chr4_3:61496526-61496545 None:intergenic 45.0%
!! TAGTATTGATTAGGGGGAGG+TGG + chr4_3:61496626-61496645 None:intergenic 45.0%
TATCAAGGGGAGGTGATGTT+GGG - chr4_3:61496946-61496965 Msa0653470:three_prime_UTR 45.0%
! GCAAGTGTAAGAGCTGATTC+TGG + chr4_3:61497146-61497165 None:intergenic 45.0%
AGTGAAATTAGTGTCTGGGC+TGG - chr4_3:61497553-61497572 Msa0653470:intron 45.0%
!! AATTAGTGTCTGGGCTGGTT+AGG - chr4_3:61497558-61497577 Msa0653470:intron 45.0%
!! ATTAGTGTCTGGGCTGGTTA+GGG - chr4_3:61497559-61497578 Msa0653470:intron 45.0%
!!! AATCGCGATTTTGGTTCCGA+CGG - chr4_3:61497613-61497632 Msa0653470:intron 45.0%
GCACTGCATGATTATTTGGC+TGG - chr4_3:61497754-61497773 Msa0653470:intron 45.0%
ACAGCTGTTATGCCGATGTA+TGG - chr4_3:61497946-61497965 Msa0653470:intron 45.0%
CAGCTGTTATGCCGATGTAT+GGG - chr4_3:61497947-61497966 Msa0653470:intron 45.0%
AGCTGTTATGCCGATGTATG+GGG - chr4_3:61497948-61497967 Msa0653470:intron 45.0%
! ATGACGACAGACCTTGTTTC+TGG - chr4_3:61498004-61498023 Msa0653470:intron 45.0%
! TGACGACAGACCTTGTTTCT+GGG - chr4_3:61498005-61498024 Msa0653470:intron 45.0%
TGGGGATTTATTGTTGCCAC+AGG - chr4_3:61498024-61498043 Msa0653470:intron 45.0%
TGCATGCCAGAAATTCGTTG+TGG + chr4_3:61498198-61498217 None:intergenic 45.0%
!! ACAACGAATTTCTGGCATGC+AGG - chr4_3:61498197-61498216 Msa0653470:intron 45.0%
AAACGAAAATGCAGAGCGAC+AGG + chr4_3:61498475-61498494 None:intergenic 45.0%
CTACAGGGTTTGACTACACT+GGG + chr4_3:61498519-61498538 None:intergenic 45.0%
ACTACAGGGTTTGACTACAC+TGG + chr4_3:61498520-61498539 None:intergenic 45.0%
CATGATCCAGCTTGACTACA+GGG + chr4_3:61498534-61498553 None:intergenic 45.0%
TTTCACACCTTCCTGATCCT+AGG + chr4_3:61498557-61498576 None:intergenic 45.0%
! ATCAGGAAGGTGTGAAAGAC+CGG - chr4_3:61498560-61498579 Msa0653470:intron 45.0%
GGAATTCGTGGATCGTAACA+TGG - chr4_3:61498581-61498600 Msa0653470:intron 45.0%
GCGATACAAGTGTTCTTGTG+AGG - chr4_3:61498798-61498817 Msa0653470:CDS 45.0%
CGCATTGTATGCGTTAAGTC+CGG - chr4_3:61498983-61499002 Msa0653470:intron 45.0%
AAGTCCGGTAAGTCCGTAAA+TGG - chr4_3:61498998-61499017 Msa0653470:intron 45.0%
! GTTCACAGTTTGCTTCCTTC+AGG + chr4_3:61499089-61499108 None:intergenic 45.0%
GGAAGCAAACTGTGAACATG+AGG - chr4_3:61499092-61499111 Msa0653470:intron 45.0%
TTGACGATCGCTTGAAAGTG+TGG - chr4_3:61499649-61499668 Msa0653470:intron 45.0%
! TGACGATCGCTTGAAAGTGT+GGG - chr4_3:61499650-61499669 Msa0653470:intron 45.0%
GGGATGAGAAAGATCAACCT+CGG - chr4_3:61499670-61499689 Msa0653470:intron 45.0%
GGATGAGAAAGATCAACCTC+GGG - chr4_3:61499671-61499690 Msa0653470:intron 45.0%
GCATAGTATGGAGCAAATGC+AGG + chr4_3:61499708-61499727 None:intergenic 45.0%
! TCAGCTTGAGGAGCATAGTA+TGG + chr4_3:61499720-61499739 None:intergenic 45.0%
ATACTATGCTCCTCAAGCTG+AGG - chr4_3:61499719-61499738 Msa0653470:intron 45.0%
CTCAATTTCCCTGCATAACC+TGG - chr4_3:61499993-61500012 Msa0653470:CDS 45.0%
! AAAGCCTTATCCCACCAAGT+GGG + chr4_3:61500117-61500136 None:intergenic 45.0%
! GTTTGACTTCTACAGGACGA+TGG - chr4_3:61500507-61500526 Msa0653470:intron 45.0%
AGTTCACTCGGAGGTAAGAT+TGG + chr4_3:61500612-61500631 None:intergenic 45.0%
CAACTGCTAAGTTAGATCCC+AGG - chr4_3:61500731-61500750 Msa0653470:CDS 45.0%
TGAAGAGAAGAAGTGAGCCT+GGG + chr4_3:61500751-61500770 None:intergenic 45.0%
! TTACTGGTGTAGCAGGTTGA+AGG + chr4_3:61500852-61500871 None:intergenic 45.0%
!! ATTGGCTTTACTGGTGTAGC+AGG + chr4_3:61500859-61500878 None:intergenic 45.0%
TGCTACACCAGTAAAGCCAA+TGG - chr4_3:61500858-61500877 Msa0653470:intron 45.0%
AAAGGGGCAACTTGAACCAT+TGG + chr4_3:61500877-61500896 None:intergenic 45.0%
AGTTCTCCTGCTAGAGAAGA+AGG - chr4_3:61500913-61500932 Msa0653470:intron 45.0%
GTTCTCCTGCTAGAGAAGAA+GGG - chr4_3:61500914-61500933 Msa0653470:intron 45.0%
TTCTCCTGCTAGAGAAGAAG+GGG - chr4_3:61500915-61500934 Msa0653470:intron 45.0%
! TTGGGGTGTCTAATGGGAAA+TGG + chr4_3:61501036-61501055 None:intergenic 45.0%
! ACAGGATTGGGGTGTCTAAT+GGG + chr4_3:61501042-61501061 None:intergenic 45.0%
! TACAGGATTGGGGTGTCTAA+TGG + chr4_3:61501043-61501062 None:intergenic 45.0%
CGGAAACTTGTACAGGATTG+GGG + chr4_3:61501053-61501072 None:intergenic 45.0%
GCGGAAACTTGTACAGGATT+GGG + chr4_3:61501054-61501073 None:intergenic 45.0%
AGCGGAAACTTGTACAGGAT+TGG + chr4_3:61501055-61501074 None:intergenic 45.0%
GAACCAATCTCCTCTTCTAC+AGG + chr4_3:61501105-61501124 None:intergenic 45.0%
TTGGTTCACAACCACCAAAC+AGG - chr4_3:61501118-61501137 Msa0653470:intron 45.0%
TGGTTCACAACCACCAAACA+GGG - chr4_3:61501119-61501138 Msa0653470:intron 45.0%
TTAGGTAGTACCCTGTTTGG+TGG + chr4_3:61501132-61501151 None:intergenic 45.0%
AGATTCTGGTCCATCACGTA+TGG - chr4_3:61501164-61501183 Msa0653470:intron 45.0%
!! AAAAGGATGGTTGATGAGGC+CGG + chr4_3:61501197-61501216 None:intergenic 45.0%
TTACCTCCTTTGGCAATCTC+TGG + chr4_3:61501272-61501291 None:intergenic 45.0%
CTCTTGAGCGATCATCTCTA+TGG + chr4_3:61501393-61501412 None:intergenic 45.0%
! GAGTGAGCTTTTGTTGCAGT+TGG - chr4_3:61501581-61501600 Msa0653470:CDS 45.0%
GCTAGAAGATGACCTACCAA+AGG + chr4_3:61501966-61501985 None:intergenic 45.0%
TAGGTCATCTTCTAGCCACA+GGG - chr4_3:61501970-61501989 Msa0653470:CDS 45.0%
ATTCAGAGTCAAGATCCCTG+TGG + chr4_3:61501988-61502007 None:intergenic 45.0%
AGGGATCTTGACTCTGAATC+TGG - chr4_3:61501989-61502008 Msa0653470:CDS 45.0%
CAGGAAATTGCACTGAAGTG+TGG - chr4_3:61502052-61502071 Msa0653470:CDS 45.0%
TGCACTGAAGTGTGGAACTA+AGG - chr4_3:61502060-61502079 Msa0653470:CDS 45.0%
TCTTTGCTTCTGATGTGAGC+AGG - chr4_3:61502190-61502209 Msa0653470:intron 45.0%
! AGTCATGCTGGCTAGAATGA+AGG + chr4_3:61502273-61502292 None:intergenic 45.0%
! TATTTGCAGGCGTGGTTTTC+TGG - chr4_3:61502705-61502724 Msa0653470:intron 45.0%
! ATTTGCAGGCGTGGTTTTCT+GGG - chr4_3:61502706-61502725 Msa0653470:intron 45.0%
! TTCTGGGAAAAAAGTTGGCC+AGG - chr4_3:61502722-61502741 Msa0653470:intron 45.0%
TCTGGGAAAAAAGTTGGCCA+GGG - chr4_3:61502723-61502742 Msa0653470:intron 45.0%
!! TTCTAGTTCTGCCAAATCCC+TGG + chr4_3:61502743-61502762 None:intergenic 45.0%
GGGATTTGGCAGAACTAGAA+TGG - chr4_3:61502743-61502762 Msa0653470:intron 45.0%
AGACTCTGCTATCTAAGGAC+CGG - chr4_3:61503063-61503082 Msa0653470:CDS 45.0%
GATGGAAGGACAATACCCTA+CGG + chr4_3:61503221-61503240 None:intergenic 45.0%
GACCTTGTCAGAGATCCAAA+GGG - chr4_3:61503258-61503277 Msa0653470:intron 45.0%
TACCCTTTGGATCTCTGACA+AGG + chr4_3:61503263-61503282 None:intergenic 45.0%
GTCAGAGATCCAAAGGGTAA+AGG - chr4_3:61503264-61503283 Msa0653470:intron 45.0%
AGGTCATTGCCTTTACCCTT+TGG + chr4_3:61503276-61503295 None:intergenic 45.0%
ATCCTTGCTTCAAGCTTGGA+AGG - chr4_3:61503561-61503580 Msa0653470:intron 45.0%
GTATGGGTATGCCTTTAGCT+AGG - chr4_3:61503686-61503705 Msa0653470:intron 45.0%
! CTAGCTTTCCTCCTAGCTAA+AGG + chr4_3:61503700-61503719 None:intergenic 45.0%
CTTTAGCTAGGAGGAAAGCT+AGG - chr4_3:61503698-61503717 Msa0653470:intron 45.0%
!! GATGAGTCTGGTTCTGCATA+TGG - chr4_3:61503975-61503994 Msa0653470:CDS 45.0%
! TCTGCATATGGTGATGTGAG+TGG - chr4_3:61503987-61504006 Msa0653470:CDS 45.0%
AATGAGACTGCCTCCTCTTT+AGG + chr4_3:61504077-61504096 None:intergenic 45.0%
AGCTGCATCAGATCCATCAA+GGG - chr4_3:61504100-61504119 Msa0653470:intron 45.0%
AGTCTCTGCCCTCAAAGAAT+TGG - chr4_3:61504163-61504182 Msa0653470:intron 45.0%
!! ATGGTTCTGGGGAGATAAGT+TGG + chr4_3:61504209-61504228 None:intergenic 45.0%
GATGAAGTATACGCACAGGT+TGG - chr4_3:61504369-61504388 Msa0653470:intron 45.0%
!! TGTTAGGCAATTTGGTGTCC+AGG - chr4_3:61504578-61504597 Msa0653470:CDS 45.0%
AAGTTGAAGCCGTGAGTGTT+GGG - chr4_3:61504672-61504691 Msa0653470:CDS 45.0%
GAATTTCCACCCAACACTCA+CGG + chr4_3:61504684-61504703 None:intergenic 45.0%
GAAATCTGGGCTTAGGTATG+GGG - chr4_3:61504717-61504736 Msa0653470:CDS 45.0%
GTCATCCTTCATAAGCACCA+TGG + chr4_3:61504773-61504792 None:intergenic 45.0%
!! TTAGGTTGAGATAGATGGCC+AGG - chr4_3:61504919-61504938 Msa0653470:intron 45.0%
ATGGCCAGGTCTATGGTAAA+GGG - chr4_3:61504933-61504952 Msa0653470:intron 45.0%
GTAAAGGGACCGGATTAACA+TGG - chr4_3:61504948-61504967 Msa0653470:intron 45.0%
! ACGGCACATTTGGAGAGTAT+AGG + chr4_3:61505261-61505280 None:intergenic 45.0%
GATGCCAATTCTGTCTGTAG+GGG + chr4_3:61505376-61505395 None:intergenic 45.0%
TTCTCTTGTCAAGGGATTGC+TGG + chr4_3:61505608-61505627 None:intergenic 45.0%
TTCAACAATGTGAAGGGTGG+TGG - chr4_3:61505694-61505713 Msa0653470:CDS 45.0%
!! CCGACCCACTTAAGTTGAAA+TGG + chr4_3:61505734-61505753 None:intergenic 45.0%
GGTCCCAATCAATGGAGTAT+TGG - chr4_3:61505882-61505901 Msa0653470:five_prime_UTR 45.0%
GAGTATGCGTTGCATTGCAT+TGG + chr4_3:61505965-61505984 None:intergenic 45.0%
AAGGTGATAGAACCACTACC+GGG + chr4_3:61506126-61506145 None:intergenic 45.0%
CAAGGTGATAGAACCACTAC+CGG + chr4_3:61506127-61506146 None:intergenic 45.0%
!! AATTAAATTAATTAAAAAGA+TGG - chr4_3:61497210-61497229 Msa0653470:CDS 5.0%
!!! ATTTTTATTTAATTTTTTAC+CGG - chr4_3:61502536-61502555 Msa0653470:intron 5.0%
!! AATTAAATTATAAAAAAAAG+TGG - chr4_3:61503406-61503425 Msa0653470:intron 5.0%
TTAGGGGGAGGTGGTGATTA+GGG + chr4_3:61496617-61496636 None:intergenic 50.0%
ATTAGGGGGAGGTGGTGATT+AGG + chr4_3:61496618-61496637 None:intergenic 50.0%
!! AGTGATGGTGACGGCGATTT+GGG + chr4_3:61496743-61496762 None:intergenic 50.0%
!! AAGTGATGGTGACGGCGATT+TGG + chr4_3:61496744-61496763 None:intergenic 50.0%
ATCAGTGGTGTATCAAGGGG+AGG - chr4_3:61496936-61496955 Msa0653470:three_prime_UTR 50.0%
GTATCAAGGGGAGGTGATGT+TGG - chr4_3:61496945-61496964 Msa0653470:three_prime_UTR 50.0%
AGTGGTGAACACCTCTCACT+AGG + chr4_3:61497066-61497085 None:intergenic 50.0%
GGAGTCTCAGTGGCATTGTT+AGG + chr4_3:61497439-61497458 None:intergenic 50.0%
CTGCATAGGTAACCGGTAAC+CGG + chr4_3:61497850-61497869 None:intergenic 50.0%
CCGGTAACTGCATAGGTAAC+CGG + chr4_3:61497857-61497876 None:intergenic 50.0%
CCGGTTACCTATGCAGTTAC+CGG - chr4_3:61497854-61497873 Msa0653470:CDS 50.0%
AAGGTGACCGGTAACTGCAT+AGG + chr4_3:61497864-61497883 None:intergenic 50.0%
!! GACGACAGACCTTGTTTCTG+GGG - chr4_3:61498006-61498025 Msa0653470:intron 50.0%
!! ACGAATTTCTGGCATGCAGG+CGG - chr4_3:61498200-61498219 Msa0653470:intron 50.0%
CGTATCAGCGGTCGAACTAT+GGG + chr4_3:61498354-61498373 None:intergenic 50.0%
CCATAGTTCGACCGCTGATA+CGG - chr4_3:61498352-61498371 Msa0653470:intron 50.0%
TTTGACACGCATCAATCCGC+AGG - chr4_3:61498395-61498414 Msa0653470:intron 50.0%
GTCAAACCCTGTAGTCAAGC+TGG - chr4_3:61498525-61498544 Msa0653470:intron 50.0%
GCATGATCCAGCTTGACTAC+AGG + chr4_3:61498535-61498554 None:intergenic 50.0%
AGTCAAGCTGGATCATGCCT+AGG - chr4_3:61498537-61498556 Msa0653470:intron 50.0%
GATCATGCCTAGGATCAGGA+AGG - chr4_3:61498547-61498566 Msa0653470:intron 50.0%
GTGTGAAAGACCGGAATTCG+TGG - chr4_3:61498569-61498588 Msa0653470:intron 50.0%
TTGTGAGGTTGAGACCTGCA+TGG - chr4_3:61498813-61498832 Msa0653470:CDS 50.0%
TGTGAGGTTGAGACCTGCAT+GGG - chr4_3:61498814-61498833 Msa0653470:CDS 50.0%
GACCTGCATGGGAAGATCTT+CGG - chr4_3:61498825-61498844 Msa0653470:CDS 50.0%
GGAGCTACCTGATTGCAAGA+GGG - chr4_3:61498846-61498865 Msa0653470:intron 50.0%
GGGACTATGCGCTAGAAATG+TGG - chr4_3:61498909-61498928 Msa0653470:intron 50.0%
CACGCCATTTACGGACTTAC+CGG + chr4_3:61499005-61499024 None:intergenic 50.0%
TTGGATGGCATGAGCCATCT+TGG + chr4_3:61499614-61499633 None:intergenic 50.0%
TGGCTCATGCCATCCAAAGA+TGG - chr4_3:61499617-61499636 Msa0653470:intron 50.0%
!! GGTAAATTTGCTGGCACGCA+TGG - chr4_3:61499740-61499759 Msa0653470:intron 50.0%
!! AATTTGCTGGCACGCATGGT+TGG - chr4_3:61499744-61499763 Msa0653470:intron 50.0%
GTTGCTTGCAATGTTAGGGG+TGG - chr4_3:61499893-61499912 Msa0653470:intron 50.0%
TTCATGTAGCAGACCCCACT+TGG - chr4_3:61500100-61500119 Msa0653470:intron 50.0%
! AAGCCTTATCCCACCAAGTG+GGG + chr4_3:61500116-61500135 None:intergenic 50.0%
! CAAAGCCTTATCCCACCAAG+TGG + chr4_3:61500118-61500137 None:intergenic 50.0%
! CACTTGGTGGGATAAGGCTT+TGG - chr4_3:61500116-61500135 Msa0653470:intron 50.0%
GACGATGGATCTGCTTCCTA+TGG - chr4_3:61500522-61500541 Msa0653470:intron 50.0%
CTGAAGAGAAGAAGTGAGCC+TGG + chr4_3:61500752-61500771 None:intergenic 50.0%
ATCATAGATGCGTGTGGTGC+AGG + chr4_3:61500808-61500827 None:intergenic 50.0%
ACTTCCCCTTCTTCTCTAGC+AGG + chr4_3:61500922-61500941 None:intergenic 50.0%
GCTAGAGAAGAAGGGGAAGT+AGG - chr4_3:61500922-61500941 Msa0653470:intron 50.0%
TAGACCCAGATACAAGGCGA+AGG - chr4_3:61500956-61500975 Msa0653470:intron 50.0%
GAAGCCTTCGCCTTGTATCT+GGG + chr4_3:61500963-61500982 None:intergenic 50.0%
AGAAGCCTTCGCCTTGTATC+TGG + chr4_3:61500964-61500983 None:intergenic 50.0%
GGGTGTCTAATGGGAAATGG+AGG + chr4_3:61501033-61501052 None:intergenic 50.0%
GGGATGGTTTCCTGTAGAAG+AGG - chr4_3:61501092-61501111 Msa0653470:intron 50.0%
! CATCACGTATGGAGAAGCAC+CGG - chr4_3:61501175-61501194 Msa0653470:intron 50.0%
TGAGAAGCAAATGCTTGGGG+AGG + chr4_3:61501501-61501520 None:intergenic 50.0%
GTAGGTCATCTTCTAGCCAC+AGG - chr4_3:61501969-61501988 Msa0653470:CDS 50.0%
TTGCTTCTGATGTGAGCAGG+TGG - chr4_3:61502193-61502212 Msa0653470:intron 50.0%
GTCACCATTATTTGCAGGCG+TGG - chr4_3:61502697-61502716 Msa0653470:intron 50.0%
CTTGTTAGACCAGCCCCATT+GGG - chr4_3:61503162-61503181 Msa0653470:CDS 50.0%
CAGTATTAACCCAATGGGGC+TGG + chr4_3:61503174-61503193 None:intergenic 50.0%
GGACCTTGTCAGAGATCCAA+AGG - chr4_3:61503257-61503276 Msa0653470:intron 50.0%
CAATAAACAAGGGGGCAGCA+AGG + chr4_3:61503499-61503518 None:intergenic 50.0%
AGCCTTCCAAGCTTGAAGCA+AGG + chr4_3:61503566-61503585 None:intergenic 50.0%
TGGGTATGCCTTTAGCTAGG+AGG - chr4_3:61503689-61503708 Msa0653470:intron 50.0%
TCACGTGCTAAGGATGAGTC+TGG - chr4_3:61503963-61503982 Msa0653470:CDS 50.0%
TAATCACCCCCTGCCTAAAG+AGG - chr4_3:61504061-61504080 Msa0653470:intron 50.0%
CAGCTGCATCAGATCCATCA+AGG - chr4_3:61504099-61504118 Msa0653470:intron 50.0%
! GTTCGGACCACTGAGGTATT+TGG + chr4_3:61504398-61504417 None:intergenic 50.0%
GAAGTTGAAGCCGTGAGTGT+TGG - chr4_3:61504671-61504690 Msa0653470:CDS 50.0%
AATGGTGTACTTGTGGCCCA+TGG - chr4_3:61504753-61504772 Msa0653470:CDS 50.0%
GGTGCTTATGAAGGATGACC+TGG - chr4_3:61504774-61504793 Msa0653470:CDS 50.0%
GAGATAGATGGCCAGGTCTA+TGG - chr4_3:61504926-61504945 Msa0653470:intron 50.0%
GATGGCCAGGTCTATGGTAA+AGG - chr4_3:61504932-61504951 Msa0653470:intron 50.0%
CAGGTCTATGGTAAAGGGAC+CGG - chr4_3:61504938-61504957 Msa0653470:intron 50.0%
AGCCTCGTCCCATGTTAATC+CGG + chr4_3:61504960-61504979 None:intergenic 50.0%
ATGGGACGAGGCTAAAATGC+AGG - chr4_3:61504967-61504986 Msa0653470:intron 50.0%
ATGGCCACAGCATTCAGAGA+CGG - chr4_3:61505145-61505164 Msa0653470:intron 50.0%
CCTCACCTCTATTTCAGTGG+AGG + chr4_3:61505820-61505839 None:intergenic 50.0%
CCTCCACTGAAATAGAGGTG+AGG - chr4_3:61505817-61505836 Msa0653470:CDS 50.0%
GTGCCTCACCTCTATTTCAG+TGG + chr4_3:61505823-61505842 None:intergenic 50.0%
CTGAAATAGAGGTGAGGCAC+TGG - chr4_3:61505823-61505842 Msa0653470:CDS 50.0%
!! GGAGTATTGGTTGCGTTGTG+TGG - chr4_3:61505895-61505914 Msa0653470:five_prime_UTR 50.0%
GTGTGGATATGCTTCGAGAC+CGG - chr4_3:61505912-61505931 Msa0653470:five_prime_UTR 50.0%
TCGCTAACATAACCCGGTAG+TGG - chr4_3:61506111-61506130 Msa0653470:five_prime_UTR 50.0%
! GAGTCTTTAGAGGGGACTCA+AGG + chr4_3:61506145-61506164 None:intergenic 50.0%
GGCATAACAGCTGTCTGCAG+GGG + chr4_3:61497940-61497959 None:intergenic 55.0%
CGGCATAACAGCTGTCTGCA+GGG + chr4_3:61497941-61497960 None:intergenic 55.0%
TCGGCATAACAGCTGTCTGC+AGG + chr4_3:61497942-61497961 None:intergenic 55.0%
GGAGATCAAGCGCTACCAAG+AGG - chr4_3:61498221-61498240 Msa0653470:intron 55.0%
CCGTATCAGCGGTCGAACTA+TGG + chr4_3:61498355-61498374 None:intergenic 55.0%
GCTGGATCATGCCTAGGATC+AGG - chr4_3:61498543-61498562 Msa0653470:intron 55.0%
CTCCGAAGATCTTCCCATGC+AGG + chr4_3:61498830-61498849 None:intergenic 55.0%
CGGAGCTACCTGATTGCAAG+AGG - chr4_3:61498845-61498864 Msa0653470:intron 55.0%
!! AAGAGGGCGCAAGCGTTTTG+AGG - chr4_3:61498862-61498881 Msa0653470:intron 55.0%
ATGTAGCAGACCCCACTTGG+TGG - chr4_3:61500103-61500122 Msa0653470:intron 55.0%
TGTAGCAGACCCCACTTGGT+GGG - chr4_3:61500104-61500123 Msa0653470:intron 55.0%
! AGACCCCACTTGGTGGGATA+AGG - chr4_3:61500110-61500129 Msa0653470:intron 55.0%
TAATTGCTCACGTCAGGGGC+AGG + chr4_3:61500331-61500350 None:intergenic 55.0%
TGATGGCATGGCAGATGCTG+AGG - chr4_3:61500566-61500585 Msa0653470:CDS 55.0%
ATAGATGCGTGTGGTGCAGG+TGG + chr4_3:61500805-61500824 None:intergenic 55.0%
GGTTGAAGGAACTGTGCGTG+AGG + chr4_3:61500838-61500857 None:intergenic 55.0%
GCACGAGCGGAAACTTGTAC+AGG + chr4_3:61501060-61501079 None:intergenic 55.0%
TACAGGAAACCATCCCCCAC+GGG + chr4_3:61501088-61501107 None:intergenic 55.0%
CTACAGGAAACCATCCCCCA+CGG + chr4_3:61501089-61501108 None:intergenic 55.0%
CGGTGCTTCTCCATACGTGA+TGG + chr4_3:61501177-61501196 None:intergenic 55.0%
GAGCCACCAGAGATTGCCAA+AGG - chr4_3:61501263-61501282 Msa0653470:intron 55.0%
CCTCCTTTGGCAATCTCTGG+TGG + chr4_3:61501269-61501288 None:intergenic 55.0%
CCACCAGAGATTGCCAAAGG+AGG - chr4_3:61501266-61501285 Msa0653470:intron 55.0%
GGGATGACATCCCCTTTGGT+AGG - chr4_3:61501951-61501970 Msa0653470:CDS 55.0%
AGAGCTGCAGTTCTCCATCG+AGG - chr4_3:61502244-61502263 Msa0653470:CDS 55.0%
AGCGCGATATAAGGCTGCTG+AGG - chr4_3:61502767-61502786 Msa0653470:intron 55.0%
!! CCAATGGGGCTGGTCTAACA+AGG + chr4_3:61503164-61503183 None:intergenic 55.0%
CCTTGTTAGACCAGCCCCAT+TGG - chr4_3:61503161-61503180 Msa0653470:CDS 55.0%
ACTGCCTCCTCTTTAGGCAG+GGG + chr4_3:61504071-61504090 None:intergenic 55.0%
GACTGCCTCCTCTTTAGGCA+GGG + chr4_3:61504072-61504091 None:intergenic 55.0%
AGACTGCCTCCTCTTTAGGC+AGG + chr4_3:61504073-61504092 None:intergenic 55.0%
! CAGTGCATGATGGAGGGTCT+TGG - chr4_3:61504294-61504313 Msa0653470:intron 55.0%
GTTCAGAGTTCGGACCACTG+AGG + chr4_3:61504405-61504424 None:intergenic 55.0%
!! TTGAAGCCGTGAGTGTTGGG+TGG - chr4_3:61504675-61504694 Msa0653470:CDS 55.0%
GTGGCCCATGGTGCTTATGA+AGG - chr4_3:61504765-61504784 Msa0653470:CDS 55.0%
CGGTCCCTTTACCATAGACC+TGG + chr4_3:61504940-61504959 None:intergenic 55.0%
GACCGGATTAACATGGGACG+AGG - chr4_3:61504955-61504974 Msa0653470:intron 55.0%
CGTTCTTCAGGCTGCTGAGA+AGG - chr4_3:61505098-61505117 Msa0653470:intron 55.0%
TCTGCCGTCTCTGAATGCTG+TGG + chr4_3:61505152-61505171 None:intergenic 55.0%
! TGTAGGGGCTGGCAAACCAT+TGG + chr4_3:61505361-61505380 None:intergenic 55.0%
CCAATTCTGTCTGTAGGGGC+TGG + chr4_3:61505372-61505391 None:intergenic 55.0%
CCAGCCCCTACAGACAGAAT+TGG - chr4_3:61505369-61505388 Msa0653470:intron 55.0%
CTGCAGCGATTCGCATCTTC+TGG - chr4_3:61505563-61505582 Msa0653470:intron 55.0%
! GGGATTGCTGGAGCATTCCT+AGG + chr4_3:61505596-61505615 None:intergenic 55.0%
! ATGTGAAGGGTGGTGGCTGT+TGG - chr4_3:61505701-61505720 Msa0653470:CDS 55.0%
! TGTGAAGGGTGGTGGCTGTT+GGG - chr4_3:61505702-61505721 Msa0653470:CDS 55.0%
AGGGGAGGTGATGTTGGGTG+AGG - chr4_3:61496951-61496970 Msa0653470:three_prime_UTR 60.0%
GCTTGCGCCCTCTTGCAATC+AGG + chr4_3:61498856-61498875 None:intergenic 60.0%
!! GCAGGTGGTGGAACTGAACC+AGG + chr4_3:61500790-61500809 None:intergenic 60.0%
GCAATCTCTGGTGGCTCTCG+TGG + chr4_3:61501260-61501279 None:intergenic 60.0%
GCAGGGGATGACATCCCCTT+TGG - chr4_3:61501947-61501966 Msa0653470:CDS 60.0%
GGAGAACTGCAGCTCTCTGC+TGG + chr4_3:61502240-61502259 None:intergenic 60.0%
GCTCATAGCGCACCCAATCC+TGG + chr4_3:61502510-61502529 None:intergenic 60.0%
TCACCCCCTGCCTAAAGAGG+AGG - chr4_3:61504064-61504083 Msa0653470:intron 60.0%
CTGCCTCCTCTTTAGGCAGG+GGG + chr4_3:61504070-61504089 None:intergenic 60.0%
!! CAGGCTGCTGAGAAGGCACT+TGG - chr4_3:61505105-61505124 Msa0653470:intron 60.0%
AGAGACGGCAGAGTTCTCCC+AGG - chr4_3:61505160-61505179 Msa0653470:intron 60.0%
GCGAATCGCTGCAGAGTTCG+TGG + chr4_3:61505557-61505576 None:intergenic 60.0%
! AAGGGTGGTGGCTGTTGGGT+TGG - chr4_3:61505706-61505725 Msa0653470:CDS 60.0%
! AGGGTGGTGGCTGTTGGGTT+GGG - chr4_3:61505707-61505726 Msa0653470:CDS 60.0%
GCAGGAACGACGTGTACCCG+AGG + chr4_3:61499690-61499709 None:intergenic 65.0%
TTGCTCACGTCAGGGGCAGG+AGG + chr4_3:61500328-61500347 None:intergenic 65.0%
GATGCGTGTGGTGCAGGTGG+TGG + chr4_3:61500802-61500821 None:intergenic 65.0%
GGAAACCATCCCCCACGGGA+TGG + chr4_3:61501084-61501103 None:intergenic 65.0%
TCCGCTCGTGCACCATCCCG+TGG - chr4_3:61501069-61501088 Msa0653470:intron 70.0%
CCCACGGGATGGTGCACGAG+CGG + chr4_3:61501073-61501092 None:intergenic 70.0%
CCGCTCGTGCACCATCCCGT+GGG - chr4_3:61501070-61501089 Msa0653470:intron 70.0%
CGCTCGTGCACCATCCCGTG+GGG - chr4_3:61501071-61501090 Msa0653470:intron 70.0%
GCTCGTGCACCATCCCGTGG+GGG - chr4_3:61501072-61501091 Msa0653470:intron 70.0%
GTGCACCATCCCGTGGGGGA+TGG - chr4_3:61501076-61501095 Msa0653470:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 61496486 61506315 61496486 ID=Msa0653470;Name=Msa0653470
chr4_3 mRNA 61496486 61506315 61496486 ID=Msa0653470-mRNA-1;Parent=Msa0653470;Name=Msa0653470-mRNA-1;_AED=0.28;_eAED=0.28;_QI=442|1|1|1|1|1|17|696|957
chr4_3 exon 61496486 61497290 61496486 ID=Msa0653470-mRNA-1:exon:16928;Parent=Msa0653470-mRNA-1
chr4_3 exon 61497620 61497693 61497620 ID=Msa0653470-mRNA-1:exon:16927;Parent=Msa0653470-mRNA-1
chr4_3 exon 61497813 61497878 61497813 ID=Msa0653470-mRNA-1:exon:16926;Parent=Msa0653470-mRNA-1
chr4_3 exon 61498415 61498504 61498415 ID=Msa0653470-mRNA-1:exon:16925;Parent=Msa0653470-mRNA-1
chr4_3 exon 61498617 61498849 61498617 ID=Msa0653470-mRNA-1:exon:16924;Parent=Msa0653470-mRNA-1
chr4_3 exon 61499991 61500087 61499991 ID=Msa0653470-mRNA-1:exon:16923;Parent=Msa0653470-mRNA-1
chr4_3 exon 61500536 61500589 61500536 ID=Msa0653470-mRNA-1:exon:16922;Parent=Msa0653470-mRNA-1
chr4_3 exon 61500720 61500850 61500720 ID=Msa0653470-mRNA-1:exon:16921;Parent=Msa0653470-mRNA-1
chr4_3 exon 61501353 61501416 61501353 ID=Msa0653470-mRNA-1:exon:16920;Parent=Msa0653470-mRNA-1
chr4_3 exon 61501514 61502104 61501514 ID=Msa0653470-mRNA-1:exon:16919;Parent=Msa0653470-mRNA-1
chr4_3 exon 61502196 61502279 61502196 ID=Msa0653470-mRNA-1:exon:16918;Parent=Msa0653470-mRNA-1
chr4_3 exon 61502438 61502543 61502438 ID=Msa0653470-mRNA-1:exon:16917;Parent=Msa0653470-mRNA-1
chr4_3 exon 61502877 61502947 61502877 ID=Msa0653470-mRNA-1:exon:16916;Parent=Msa0653470-mRNA-1
chr4_3 exon 61503061 61503218 61503061 ID=Msa0653470-mRNA-1:exon:16915;Parent=Msa0653470-mRNA-1
chr4_3 exon 61503797 61504007 61503797 ID=Msa0653470-mRNA-1:exon:16914;Parent=Msa0653470-mRNA-1
chr4_3 exon 61504385 61504855 61504385 ID=Msa0653470-mRNA-1:exon:16913;Parent=Msa0653470-mRNA-1
chr4_3 exon 61505610 61506315 61505610 ID=Msa0653470-mRNA-1:exon:16912;Parent=Msa0653470-mRNA-1
chr4_3 five_prime_UTR 61505874 61506315 61505874 ID=Msa0653470-mRNA-1:five_prime_utr;Parent=Msa0653470-mRNA-1
chr4_3 CDS 61505610 61505873 61505610 ID=Msa0653470-mRNA-1:cds;Parent=Msa0653470-mRNA-1
chr4_3 CDS 61504385 61504855 61504385 ID=Msa0653470-mRNA-1:cds;Parent=Msa0653470-mRNA-1
chr4_3 CDS 61503797 61504007 61503797 ID=Msa0653470-mRNA-1:cds;Parent=Msa0653470-mRNA-1
chr4_3 CDS 61503061 61503218 61503061 ID=Msa0653470-mRNA-1:cds;Parent=Msa0653470-mRNA-1
chr4_3 CDS 61502877 61502947 61502877 ID=Msa0653470-mRNA-1:cds;Parent=Msa0653470-mRNA-1
chr4_3 CDS 61502438 61502543 61502438 ID=Msa0653470-mRNA-1:cds;Parent=Msa0653470-mRNA-1
chr4_3 CDS 61502196 61502279 61502196 ID=Msa0653470-mRNA-1:cds;Parent=Msa0653470-mRNA-1
chr4_3 CDS 61501514 61502104 61501514 ID=Msa0653470-mRNA-1:cds;Parent=Msa0653470-mRNA-1
chr4_3 CDS 61501353 61501416 61501353 ID=Msa0653470-mRNA-1:cds;Parent=Msa0653470-mRNA-1
chr4_3 CDS 61500720 61500850 61500720 ID=Msa0653470-mRNA-1:cds;Parent=Msa0653470-mRNA-1
chr4_3 CDS 61500536 61500589 61500536 ID=Msa0653470-mRNA-1:cds;Parent=Msa0653470-mRNA-1
chr4_3 CDS 61499991 61500087 61499991 ID=Msa0653470-mRNA-1:cds;Parent=Msa0653470-mRNA-1
chr4_3 CDS 61498617 61498849 61498617 ID=Msa0653470-mRNA-1:cds;Parent=Msa0653470-mRNA-1
chr4_3 CDS 61498415 61498504 61498415 ID=Msa0653470-mRNA-1:cds;Parent=Msa0653470-mRNA-1
chr4_3 CDS 61497813 61497878 61497813 ID=Msa0653470-mRNA-1:cds;Parent=Msa0653470-mRNA-1
chr4_3 CDS 61497620 61497693 61497620 ID=Msa0653470-mRNA-1:cds;Parent=Msa0653470-mRNA-1
chr4_3 CDS 61497182 61497290 61497182 ID=Msa0653470-mRNA-1:cds;Parent=Msa0653470-mRNA-1
chr4_3 three_prime_UTR 61496486 61497181 61496486 ID=Msa0653470-mRNA-1:three_prime_utr;Parent=Msa0653470-mRNA-1
Gene Sequence

>Msa0653470

ATGTATAAATCAGTGGTGTATCAAGGGGAGGTGATGTTGGGTGAGGTAGATATATACCCAGAAGTGAACAACAACATCAACAACAAGAACAAGAATTTTGATGTGAAGGAAATCAGAATAACTCACTTTTCTCAACCTAGTGAGAGGTGTTCACCACTTGCTGTTCTTCATACTATTACTACTGTTTGCTTCAAAATGGAGTCAAAGACACAGCACCAGAATCAGCTCTTACACTTGCACTCCTTGTGTATCAGAGAGAACAAGACAGCTGTTATGCCGATGTATGGGGAAGAATTACATTTGGTTGCAATGCATTCACGGAATGACGACAGACCTTGTTTCTGGGGATTTATTGTTGCCACAGGACTTTATAATTCGTCTGTTGTGTTGTTAAATCTCAGATGTTTGGGTATAGTGTTTGATCTGGATGAAACCCTTGTCGTAGCAAATACAATGCGCTCATTCGAGGATAGAATTGATGCACTCCAGAGAAAAGTAAACTCTGAGGTAGATCCACAACGAATTTCTGGCATGCAGGCGGAGATCAAGCGCTACCAAGAGGACAAGAGTATATTGAAGCAGTATGCTGAAAATGATCAGGTAGTTGATAACGGAAAAGTGATAAAAGTTCAATCCGAGCTTGTTCCAGCATTATCTGACAGTCATCAGCCCATAGTTCGACCGCTGATACGGTTACATGAAAAAAACATTATTTTGACACGCATCAATCCGCAGATTCGCGATACAAGTGTTCTTGTGAGGTTGAGACCTGCATGGGAAGATCTTCGGAGCTACCTGATTGCAAGAGGGCGCAAGCGTTTTGAGGTTTTTGTTTGCACAATGGCTGAAAGGGACTATGCGCTAGAAATGTGGAGACTTCTTGATCCAGATTCAAATTTGATAAATTCAAAAGAACTATTAGGTCGCATTGTATGCGTTAAGTCCGGTTTGAAAAAGTCTTTGTTCAATGTCTTCCAAGATGGCTCATGCCATCCAAAGATGGCGTTAGTAATTGACGATCGCTTGAAAGTGTGGGATGAGAAAGATCAACCTCGGGTACACGTCGTTCCTGCATTTGCTCCATACTATGCTCCTCAAGCTGAGGCAAGCAATACTATCCCTGTCTTATGCGTTGCAAGAAATGTTGCTTGCAATGTTAGGGGTGGCTTCTTTAAGGATTTTGATGATGGTCTTCTACAAAAGATTCCTCAAATTGCCTATGAAGATGATATTAAAGATATACCTCCTGCCCCTGACGTGAGCAATTATCTAGTTTCAGAGGACGATGGATCTGCTTCCTATGGAAATAGAGATCCGTTTTTGTTTGATGGCATGGCAGATGCTGAGGTAGAAAGAAAATTGAAGGATGCAATAACAGCAACTTCAGCTATTCCTATGACAACTGCTAAGTTAGATCCCAGGCTCACTTCTTCTCTTCAGTATACAATGGTATCTCCTGGTTCAGTTCCACCACCTGCACCACACGCATCTATGATACAATTGCCTCACGCACAGTTCCTTCAACCTGCTACACCAGTAAAGCCAATGGTTCAAGTTGCCCCTTTAGAATCAAGCTTGCATAGTTCTCCTGCTAGAGAAGAAGGGGAAGTAGGTGAATCAGAATTAGACCCAGATACAAGGCGAAGGCTTCTCATATTGCAACATGGACAAGATGTTAGGGATCATACATCTAGTGAGCCTCCATTTCCCATTAGACACCCCAATCCTGTACAAGTTTCCGCTCGTGCACCATCCCGTGGGGGATGGTTTCCTGTAGAAGAGGAGATTGGTTCACAACCACCAAACAGGGTACTACCTAAAGAAATGCTTGTAGATTCTGGTCCATCACGTATGGAGAAGCACCGGCCTCATCAACCATCCTTTTTCTCTAAGGTTGATGGCTCTATTTCATCTGATAGAGCTCTCCACGAGAGCCACCAGAGATTGCCAAAGGAGATTTACCATAGAGATGATCGCTCAAGAGTAAACCATATGCTCCCTAGTTATCATTCGTTATCTGGGGATGACATCCCCTTTGGTAGGTCATCTTCTAGCCACAGGGATCTTGACTCTGAATCTGGTAATTCTGTATTGCATGCAGAAACACCAGTTGCAGTATTACAGGAAATTGCACTGAAGTGTGGAACTAAGGTGGAATATACATCATCTTTGGCTGCCAGCAGAGAGCTGCAGTTCTCCATCGAGGCGTGGTTTTCTGGGAAAAAAGTTGGCCAGGGATTTGGCAGAACTAGAATGGAAGCGCGATATAAGGCTGCTGAGGATTCTATTAAACATTTGGCAGACATATATTTATCACGTGCTAAGGATGAGTCTGGTTCTGCATATGGTGATGTGAGTGGATTTCCTAATGCAAATGACAACGGTTATGTGGGTAATGTTAGTTCTCTTGGTAATCACCCCCTGCCTAAAGAGGAGGCAGTCTCATTTTCAGCTGCATCAGATCCATCAAGGGTTTTAGATCCTAGGTTGGAAGTTAAGAGATCAACGGGTTCAGTCTCTGCCCTCAAAGAATTGTGCATGATGGAGGGTCTTGGTGTCAATTTTCTATCGGTGCCTGCTCCAATGTTAACAAATTCAGTTCAGAAAGATGAAGTATACGCACAGGTTGAGATAGATGGCCAGGTCTATGGTAAAGGGACCGGATTAACATGGGACGAGGCTAAAATGCAGGCTGCTGAGAAGGCACTTGGAAGTCTAAGAACAATGCATGGCCACAGCATTCAGAGACGGCAGAGTTCTCCCAGGCCATTTCAGGGATTCTCGAATAAACGTTTGAAGCAAGAACATCCACGAACTCTGCAGCGATTCGCATCTTCTGGTAGATATCCTAGGAATGCTCCAGCAATCCCTTGA
Protein sequence

>Msa0653470

MYKSVVYQGEVMLGEVDIYPEVNNNINNKNKNFDVKEIRITHFSQPSERCSPLAVLHTITTVCFKMESKTQHQNQLLHLHSLCIRENKTAVMPMYGEELHLVAMHSRNDDRPCFWGFIVATGLYNSSVVLLNLRCLGIVFDLDETLVVANTMRSFEDRIDALQRKVNSEVDPQRISGMQAEIKRYQEDKSILKQYAENDQVVDNGKVIKVQSELVPALSDSHQPIVRPLIRLHEKNIILTRINPQIRDTSVLVRLRPAWEDLRSYLIARGRKRFEVFVCTMAERDYALEMWRLLDPDSNLINSKELLGRIVCVKSGLKKSLFNVFQDGSCHPKMALVIDDRLKVWDEKDQPRVHVVPAFAPYYAPQAEASNTIPVLCVARNVACNVRGGFFKDFDDGLLQKIPQIAYEDDIKDIPPAPDVSNYLVSEDDGSASYGNRDPFLFDGMADAEVERKLKDAITATSAIPMTTAKLDPRLTSSLQYTMVSPGSVPPPAPHASMIQLPHAQFLQPATPVKPMVQVAPLESSLHSSPAREEGEVGESELDPDTRRRLLILQHGQDVRDHTSSEPPFPIRHPNPVQVSARAPSRGGWFPVEEEIGSQPPNRVLPKEMLVDSGPSRMEKHRPHQPSFFSKVDGSISSDRALHESHQRLPKEIYHRDDRSRVNHMLPSYHSLSGDDIPFGRSSSSHRDLDSESGNSVLHAETPVAVLQEIALKCGTKVEYTSSLAASRELQFSIEAWFSGKKVGQGFGRTRMEARYKAAEDSIKHLADIYLSRAKDESGSAYGDVSGFPNANDNGYVGNVSSLGNHPLPKEEAVSFSAASDPSRVLDPRLEVKRSTGSVSALKELCMMEGLGVNFLSVPAPMLTNSVQKDEVYAQVEIDGQVYGKGTGLTWDEAKMQAAEKALGSLRTMHGHSIQRRQSSPRPFQGFSNKRLKQEHPRTLQRFASSGRYPRNAPAIP*