AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1119100


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1119100 MtrunA17_Chr7g0267711 91.213 478 17 2 1 478 1 453 0.0 847
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1119100 AT1G29320.1 53.382 414 166 3 1 411 1 390 8.60e-147 428
Msa1119100 AT1G29320.2 53.606 416 163 5 1 411 1 391 5.96e-146 426

Find 144 sgRNAs with CRISPR-Local

Find 569 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGAGAAGTTTGCTTTATT+TGG 0.096155 7_3:+67944084 Msa1119100:CDS
CAGGAGTTTGTGTTACTTTA+TGG 0.121349 7_3:+67949352 Msa1119100:three_prime_UTR
AAGGCGTTGAAGTTAATATT+TGG 0.160856 7_3:+67944805 Msa1119100:CDS
TCTGAAGAGAATAATGTTAT+TGG 0.190952 7_3:+67941735 Msa1119100:CDS
CTAACCTTCAACAATGAAAT+TGG 0.239759 7_3:-67948505 None:intergenic
CTCATGTTCATCATTTCCTT+TGG 0.278219 7_3:-67949138 None:intergenic
TGGATTCAAACTCAAGATTC+TGG 0.297251 7_3:-67941776 None:intergenic
AGTTGATGTTTCATATAATT+AGG 0.307128 7_3:+67949573 Msa1119100:three_prime_UTR
CATACATCCCAATGTTAGTT+TGG 0.310120 7_3:-67949293 None:intergenic
TGGTGGTGAAGCTGCGATTT+TGG 0.317374 7_3:-67940869 None:intergenic
TCCTCGGCCAGTGCTTTAAT+TGG 0.319494 7_3:-67946169 None:intergenic
TCTGAAAAGGACAAAGAAAA+AGG 0.321181 7_3:-67947297 None:intergenic
TAAAAGTACCTGATGGTTAT+TGG 0.322979 7_3:-67945097 None:intergenic
AACATGGAGGAGGTAGGATT+TGG 0.326091 7_3:+67949460 Msa1119100:three_prime_UTR
GGATGGCTATTTACGACTTT+GGG 0.333336 7_3:+67947232 Msa1119100:CDS
TGGTAGCGAATCCGCTCCTT+TGG 0.333516 7_3:-67948964 None:intergenic
TTCATAGTTTCTTCCTTGCT+TGG 0.344943 7_3:-67948984 None:intergenic
ACCTGGAATGTTTGTAATAG+TGG 0.345723 7_3:+67944033 Msa1119100:CDS
AGGCGTTGAAGTTAATATTT+GGG 0.363980 7_3:+67944806 Msa1119100:CDS
GAAGATCCTGTCGCTGAATC+AGG 0.366839 7_3:-67943991 None:intergenic
GATGGCAACACAATCTATCT+AGG 0.371926 7_3:+67946196 Msa1119100:CDS
TTGATAACTGCACGAAGATC+TGG 0.374516 7_3:+67944832 Msa1119100:CDS
GGGTTCATGGCTCACAGATT+TGG 0.379867 7_3:-67944859 None:intergenic
CAATGTTAGTTTGGAATCCT+TGG 0.381539 7_3:-67949284 None:intergenic
GATTCCAATTTCATTGTTGA+AGG 0.393194 7_3:+67948501 Msa1119100:CDS
TGGATGGCTATTTACGACTT+TGG 0.400867 7_3:+67947231 Msa1119100:CDS
CTAAATCACAACCCTTCATC+TGG 0.401575 7_3:-67949233 None:intergenic
TGTGTGTTCTTCACTCTCCT+TGG 0.402448 7_3:-67949111 None:intergenic
AATGAGTGAAACAGCGTTAA+CGG 0.407170 7_3:-67941135 None:intergenic
AATAAAGAAAATATGATAGA+TGG 0.407882 7_3:+67949068 Msa1119100:CDS
TGTTGGAGGTTAACTATTGT+TGG 0.409661 7_3:-67949441 None:intergenic
GACCATCGAAAATTTGTTGC+TGG 0.414825 7_3:+67945072 Msa1119100:CDS
GGTAGCGAATCCGCTCCTTT+GGG 0.415243 7_3:-67948963 None:intergenic
ACCACTATTACAAACATTCC+AGG 0.418193 7_3:-67944034 None:intergenic
AGATCAATCATATTAGTCTA+TGG 0.423363 7_3:-67949713 None:intergenic
TTACTAGGATGGTTAGTTTG+TGG 0.433912 7_3:+67949380 Msa1119100:three_prime_UTR
AGCTTCACCACCACCGTAGT+TGG 0.434118 7_3:+67940879 Msa1119100:five_prime_UTR
TTATAATTTACTTACATGTA+CGG 0.443505 7_3:+67943933 Msa1119100:CDS
CATGCAGAATAGGCTGCTTA+AGG 0.458100 7_3:-67948470 None:intergenic
GAAGCTACCACAGGTAGCTC+AGG 0.460028 7_3:-67946849 None:intergenic
GAAGTTCCTGATTCAGCGAC+AGG 0.460401 7_3:+67943985 Msa1119100:CDS
GTTAACGGACTTAGTTGAAT+CGG 0.462040 7_3:-67941120 None:intergenic
TATAATTTACTTACATGTAC+GGG 0.462972 7_3:+67943934 Msa1119100:CDS
CGAAAATCAATAGAGAGAAC+AGG 0.464845 7_3:-67946139 None:intergenic
AAATATGAAATTCCAGATGA+AGG 0.466225 7_3:+67949221 Msa1119100:CDS
GCTTCACCACCACCGTAGTT+GGG 0.468688 7_3:+67940880 Msa1119100:five_prime_UTR
ACCCCACCTATCTACTACCT+TGG 0.469187 7_3:-67941093 None:intergenic
ATGAAGGGTTGTGATTTAGC+TGG 0.470545 7_3:+67949237 Msa1119100:exon
AGGCAGCTTCTTTCATCTGT+AGG 0.471788 7_3:+67947266 Msa1119100:CDS
TCTGAGCAGATATGTCATAA+AGG 0.472800 7_3:-67946111 None:intergenic
ACATGGAGGAGGTAGGATTT+GGG 0.473218 7_3:+67949461 Msa1119100:three_prime_UTR
GAGAAGTTTGCTTTATTTGG+AGG 0.475298 7_3:+67944087 Msa1119100:CDS
TACTTACATGTACGGGCAAA+GGG 0.477939 7_3:+67943941 Msa1119100:CDS
TAGCAATAGCAATTCTGAAA+AGG 0.478104 7_3:-67947310 None:intergenic
TTAACGGACTTAGTTGAATC+GGG 0.480921 7_3:-67941119 None:intergenic
TACTTTATGGTGAAGTTACT+AGG 0.480943 7_3:+67949365 Msa1119100:three_prime_UTR
TTTGGGCATCTGTTGGCTTG+TGG 0.482263 7_3:+67949478 Msa1119100:three_prime_UTR
GCTAGAGAAACTCCAGTGAC+AGG 0.483353 7_3:-67941678 None:intergenic
GGTAGGATTTGGGCATCTGT+TGG 0.485309 7_3:+67949471 Msa1119100:three_prime_UTR
TCCACTTAGAGCTTTAACCT+TGG 0.487045 7_3:+67940951 Msa1119100:CDS
GCAAAGGGAATGCAAGCATA+AGG 0.487266 7_3:+67943956 Msa1119100:CDS
CCCCACCTATCTACTACCTT+GGG 0.490032 7_3:-67941092 None:intergenic
GCTCTAAGTGGAGGACAACC+AGG 0.491508 7_3:-67940940 None:intergenic
AACACAATCTATCTAGGGAA+TGG 0.494679 7_3:+67946202 Msa1119100:CDS
CTAACATTGGGATGTATGTA+TGG 0.496674 7_3:+67949298 Msa1119100:three_prime_UTR
TATGGTTGATCTCGTTGAAA+AGG 0.497596 7_3:-67949695 None:intergenic
TTACTTACATGTACGGGCAA+AGG 0.498260 7_3:+67943940 Msa1119100:CDS
CAAGGATTCCAAACTAACAT+TGG 0.501620 7_3:+67949285 Msa1119100:three_prime_UTR
TTAAATACAGGTAAAATGCT+AGG 0.502823 7_3:+67946777 Msa1119100:intron
ACCAATTAAAGCACTGGCCG+AGG 0.503185 7_3:+67946168 Msa1119100:CDS
GAAGCATCAGATCCATTGTC+AGG 0.503948 7_3:+67946823 Msa1119100:CDS
AGACTGAAGATCTAAATCAT+TGG 0.509744 7_3:-67941715 None:intergenic
AAGGATTCCAAACTAACATT+GGG 0.510383 7_3:+67949286 Msa1119100:three_prime_UTR
ATCTATCTAGGGAATGGGTC+TGG 0.511093 7_3:+67946208 Msa1119100:CDS
TCGCTGAATCAGGAACTTCA+AGG 0.514181 7_3:-67943981 None:intergenic
TCCTACCTCCTCCATGTTGG+AGG 0.516563 7_3:-67949455 None:intergenic
AGAAGTTTGCTTTATTTGGA+GGG 0.524343 7_3:+67944088 Msa1119100:CDS
GCTTTAACCTTGGACACACT+TGG 0.529551 7_3:+67940961 Msa1119100:CDS
TATAATTGATCATCTTTAGT+GGG 0.530688 7_3:-67949672 None:intergenic
ACACAATCTATCTAGGGAAT+GGG 0.530689 7_3:+67946203 Msa1119100:CDS
AATATGAAATTCCAGATGAA+GGG 0.531290 7_3:+67949222 Msa1119100:CDS
GTATAATTGATCATCTTTAG+TGG 0.536771 7_3:-67949673 None:intergenic
TGCTGGCACCAATAACCATC+AGG 0.540640 7_3:+67945089 Msa1119100:CDS
TGTATGGTGATTGGTGATGA+AGG 0.542311 7_3:+67949314 Msa1119100:three_prime_UTR
AGGGAATGGGTCTGGTGACA+TGG 0.542984 7_3:+67946216 Msa1119100:CDS
GATAAGACCAAGTGTGTCCA+AGG 0.547203 7_3:-67940968 None:intergenic
TTATGGTGAAGTTACTAGGA+TGG 0.550902 7_3:+67949369 Msa1119100:three_prime_UTR
TAGCTCAGGGTGCCTGACAA+TGG 0.550961 7_3:-67946835 None:intergenic
AGCGGATTCGCTACCAAGCA+AGG 0.551373 7_3:+67948971 Msa1119100:CDS
GACACACTTGGTCTTATCAA+AGG 0.552595 7_3:+67940973 Msa1119100:CDS
GAGGTCCCAAGGTAGTAGAT+AGG 0.555775 7_3:+67941087 Msa1119100:CDS
TTGATATATTCACACCTACC+TGG 0.557164 7_3:+67945019 Msa1119100:CDS
TGGGATGTATGTATGGTGAT+TGG 0.565131 7_3:+67949305 Msa1119100:three_prime_UTR
TCCCAAGGTAGTAGATAGGT+GGG 0.565727 7_3:+67941091 Msa1119100:CDS
GCACTGGCCGAGGATATAGA+TGG 0.567128 7_3:+67946178 Msa1119100:CDS
CAGCAACCCAACTACGGTGG+TGG 0.570564 7_3:-67940886 None:intergenic
GCTTCTGTTGATATACGTAC+AGG 0.571055 7_3:+67946238 Msa1119100:CDS
AGGTAGGTGTGAATATATCA+AGG 0.573013 7_3:-67945017 None:intergenic
GGTATTGCAGTTATTAGCTG+TGG 0.574259 7_3:+67941516 Msa1119100:intron
TATGAAAGAGATCACGGATG+GGG 0.574536 7_3:+67949001 Msa1119100:CDS
AAGAAGAAAACGTACCGGGT+TGG 0.576937 7_3:-67941168 None:intergenic
GCTACCACTGTAGAGTGCCC+TGG 0.577472 7_3:+67940922 Msa1119100:CDS
TGAGACACCAATTAAAGCAC+TGG 0.577646 7_3:+67946162 Msa1119100:CDS
CTCAGATACACCCAAAGGAG+CGG 0.581212 7_3:+67948953 Msa1119100:intron
AGAATCTTGAGTTTGAATCC+AGG 0.582034 7_3:+67941778 Msa1119100:CDS
AAATCCTACCTCCTCCATGT+TGG 0.583159 7_3:-67949458 None:intergenic
ACTATGAAAGAGATCACGGA+TGG 0.583209 7_3:+67948999 Msa1119100:CDS
CTATGAAAGAGATCACGGAT+GGG 0.584420 7_3:+67949000 Msa1119100:CDS
TGTGTTGCCATCTATATCCT+CGG 0.585169 7_3:-67946185 None:intergenic
GTCCCAAGGTAGTAGATAGG+TGG 0.586983 7_3:+67941090 Msa1119100:CDS
ATGGCAACACAATCTATCTA+GGG 0.590346 7_3:+67946197 Msa1119100:CDS
CGCTGAATCAGGAACTTCAA+GGG 0.591335 7_3:-67943980 None:intergenic
GTTAACCTCCAACATGGAGG+AGG 0.599743 7_3:+67949450 Msa1119100:three_prime_UTR
AAGACGGCGTCAAGAGACAA+AGG 0.601694 7_3:+67949161 Msa1119100:CDS
AAATGATGAACATGAGAAGA+CGG 0.601744 7_3:+67949145 Msa1119100:CDS
AGAAACTATGAAAGAGATCA+CGG 0.602289 7_3:+67948995 Msa1119100:CDS
CTACCTGTGGTAGCTTCATG+TGG 0.603083 7_3:+67946855 Msa1119100:CDS
CTAGAGAAACTCCAGTGACA+GGG 0.603489 7_3:-67941677 None:intergenic
TCCAAGGTTAAAGCTCTAAG+TGG 0.603961 7_3:-67940952 None:intergenic
ATATGAAACAGATGTGAACC+AGG 0.611012 7_3:-67945037 None:intergenic
ATGCAAAACATTGTTGAGAG+AGG 0.622645 7_3:+67949645 Msa1119100:three_prime_UTR
AAGGTGGTAAAAGTTCGAGC+AGG 0.623070 7_3:+67949333 Msa1119100:three_prime_UTR
CATTGATCGCAAATCCAACC+CGG 0.624320 7_3:+67941154 Msa1119100:CDS
GAAGAACACACAAAATCCAA+AGG 0.629527 7_3:+67949122 Msa1119100:CDS
CACTCTACAGTGGTAGCTCG+AGG 0.631494 7_3:-67940916 None:intergenic
CAGGCACCCTGAGCTACCTG+TGG 0.634317 7_3:+67946842 Msa1119100:CDS
AAGCTACCACAGGTAGCTCA+GGG 0.640900 7_3:-67946848 None:intergenic
ACAATAGTTAACCTCCAACA+TGG 0.654062 7_3:+67949444 Msa1119100:three_prime_UTR
AAGGTTAAAGCTCTAAGTGG+AGG 0.655539 7_3:-67940949 None:intergenic
GAAACAGATGTGAACCAGGT+AGG 0.656614 7_3:-67945033 None:intergenic
TGGTAACGTCTTGTGTTGCA+AGG 0.665311 7_3:+67944053 Msa1119100:CDS
ATTTACTCAGATACACCCAA+AGG 0.670340 7_3:+67948948 Msa1119100:intron
ACCTCCAACATGGAGGAGGT+AGG 0.674644 7_3:+67949454 Msa1119100:three_prime_UTR
TTGCAGCAACCCAACTACGG+TGG 0.676543 7_3:-67940889 None:intergenic
ATGGTGATTGGTGATGAAGG+TGG 0.678783 7_3:+67949317 Msa1119100:three_prime_UTR
TCACCACATGAAGCTACCAC+AGG 0.684230 7_3:-67946858 None:intergenic
CCCAAGGTAGTAGATAGGTG+GGG 0.685917 7_3:+67941092 Msa1119100:CDS
ACAACCAGGGCACTCTACAG+TGG 0.689442 7_3:-67940926 None:intergenic
GACTTTGGGATACAAAGACA+AGG 0.696742 7_3:+67947246 Msa1119100:CDS
CTCTAAGTGGAGGACAACCA+GGG 0.698739 7_3:-67940939 None:intergenic
ACTATAGGATATATACACCA+AGG 0.701279 7_3:+67949267 Msa1119100:three_prime_UTR
TTTATGACATATCTGCTCAG+AGG 0.715403 7_3:+67946113 Msa1119100:CDS
TAACGTCTTGTGTTGCAAGG+TGG 0.722177 7_3:+67944056 Msa1119100:CDS
ATAGTTAACCTCCAACATGG+AGG 0.755401 7_3:+67949447 Msa1119100:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTAAAAATCTATTTTACA+CGG + chr7_3:67941254-67941273 Msa1119100:intron 10.0%
!! TTTCAATATTTCTTATTAAA+AGG + chr7_3:67941602-67941621 Msa1119100:intron 10.0%
!!! AATTTTGTAAACTAATAATA+TGG - chr7_3:67942012-67942031 None:intergenic 10.0%
!! TAGAAAATTAAACAAATAAA+AGG - chr7_3:67942382-67942401 None:intergenic 10.0%
!!! CAATTTTTTTTTATAGTTTT+TGG - chr7_3:67948270-67948289 None:intergenic 10.0%
!! AATTATCAATTAATTAAAAG+GGG + chr7_3:67948615-67948634 Msa1119100:intron 10.0%
!! CATAAATTATCAAAAAAACA+AGG - chr7_3:67941813-67941832 None:intergenic 15.0%
!! TTAGTTTACAAAATTGTAAT+TGG + chr7_3:67942017-67942036 Msa1119100:intron 15.0%
!!! TTTACTATTTTAAAGAGTTT+TGG + chr7_3:67942410-67942429 Msa1119100:intron 15.0%
!! TATTTGTAATTCTATATTTG+TGG + chr7_3:67943868-67943887 Msa1119100:intron 15.0%
!! ATTTGTAATTCTATATTTGT+GGG + chr7_3:67943869-67943888 Msa1119100:intron 15.0%
!!! AAATGTTTCATTGTTATTTA+GGG + chr7_3:67943909-67943928 Msa1119100:intron 15.0%
!! TTATAATTTACTTACATGTA+CGG + chr7_3:67943933-67943952 Msa1119100:CDS 15.0%
!!! TTAAATAGTTTTGCATTTTA+TGG + chr7_3:67944180-67944199 Msa1119100:intron 15.0%
!!! TCGTTAATCATTATTTTTTA+GGG - chr7_3:67944279-67944298 None:intergenic 15.0%
!!! TTCGTTAATCATTATTTTTT+AGG - chr7_3:67944280-67944299 None:intergenic 15.0%
!!! GATCTTTTTTTATATCTATA+AGG - chr7_3:67944459-67944478 None:intergenic 15.0%
!!! TAAAAAATTTGAAATGAAGA+GGG - chr7_3:67944882-67944901 None:intergenic 15.0%
!!! TCAAATTATATTTTATCAAG+AGG + chr7_3:67945294-67945313 Msa1119100:intron 15.0%
!!! CAAATTATATTTTATCAAGA+GGG + chr7_3:67945295-67945314 Msa1119100:intron 15.0%
!!! ACAAATTATATTTTATCAAG+AGG + chr7_3:67945394-67945413 Msa1119100:intron 15.0%
!!! CAAATTATATTTTATCAAGA+GGG + chr7_3:67945295-67945314 Msa1119100:intron 15.0%
!!! TGATTTGAAAAGAATATTTT+GGG - chr7_3:67945630-67945649 None:intergenic 15.0%
!!! TTGATTTGAAAAGAATATTT+TGG - chr7_3:67945631-67945650 None:intergenic 15.0%
!!! CATTAATATTAGTATTTTGA+GGG - chr7_3:67946593-67946612 None:intergenic 15.0%
!!! ACATTAATATTAGTATTTTG+AGG - chr7_3:67946594-67946613 None:intergenic 15.0%
!!! GCTATTATTTTATTAAATAC+AGG + chr7_3:67946765-67946784 Msa1119100:intron 15.0%
!!! CATTAATTTCTTTTAGATTA+AGG - chr7_3:67947367-67947386 None:intergenic 15.0%
!! TAAAAGAAATTAATGATATC+TGG + chr7_3:67947372-67947391 Msa1119100:intron 15.0%
!! TATATTGCTTATTTGAATAT+CGG + chr7_3:67947406-67947425 Msa1119100:intron 15.0%
!!! GTCATTTTGTTAAAAAAATA+TGG + chr7_3:67947844-67947863 Msa1119100:intron 15.0%
!! AAAAAAATATGGCTAAAATA+TGG + chr7_3:67947855-67947874 Msa1119100:intron 15.0%
!! ACTATAAAAAAAAATTTGCA+GGG - chr7_3:67947919-67947938 None:intergenic 15.0%
!! AACTATAAAAAAAAATTTGC+AGG - chr7_3:67947920-67947939 None:intergenic 15.0%
!! CTATAAAAAAAAAATTTGCA+GGG - chr7_3:67947981-67948000 None:intergenic 15.0%
!! ACTATAAAAAAAAAATTTGC+AGG - chr7_3:67947982-67948001 None:intergenic 15.0%
!! AAACTATAAAAAAAAATTGC+AGG + chr7_3:67948271-67948290 Msa1119100:intron 15.0%
!! AACTATAAAAAAAAATTGCA+GGG + chr7_3:67948272-67948291 Msa1119100:intron 15.0%
!!! GCAATTTTTTTTATAGTTTT+TGG - chr7_3:67948331-67948350 None:intergenic 15.0%
!! AAAACTATAAAAAAAATTGC+AGG + chr7_3:67948331-67948350 Msa1119100:intron 15.0%
!! AAACTATAAAAAAAATTGCA+GGG + chr7_3:67948332-67948351 Msa1119100:intron 15.0%
!!! AATATTTTTTGGCTAAAATA+TGG - chr7_3:67948396-67948415 None:intergenic 15.0%
!! AATAAAGAAAATATGATAGA+TGG + chr7_3:67949068-67949087 Msa1119100:CDS 15.0%
!! TTACAAAATTGTAATTGGTT+TGG + chr7_3:67942022-67942041 Msa1119100:intron 20.0%
!!! TTGGTTTGGTTTTTTTTTTT+TGG + chr7_3:67942036-67942055 Msa1119100:intron 20.0%
!! TAACATTTAAGTCAAGAATA+TGG - chr7_3:67942107-67942126 None:intergenic 20.0%
!!! ATTCACTTTTAAAAAGAGAA+AGG - chr7_3:67942307-67942326 None:intergenic 20.0%
!!! AATACTTTTTTGTTGTAAAC+TGG - chr7_3:67942528-67942547 None:intergenic 20.0%
!!! AACTTTTAATCTTGTGTTTA+TGG - chr7_3:67942621-67942640 None:intergenic 20.0%
!! AAAAAAAAAAACCCTTAATG+AGG + chr7_3:67942673-67942692 Msa1119100:intron 20.0%
!!! TCATATTGCATTCTTTTTAA+TGG - chr7_3:67943431-67943450 None:intergenic 20.0%
!!! AAATTTTCAGAAATGCAAAT+GGG - chr7_3:67943652-67943671 None:intergenic 20.0%
!!! AAAATTTTCAGAAATGCAAA+TGG - chr7_3:67943653-67943672 None:intergenic 20.0%
!! AATTACAAATACATAATAGC+TGG - chr7_3:67943859-67943878 None:intergenic 20.0%
!!! CAAATGTTTCATTGTTATTT+AGG + chr7_3:67943908-67943927 Msa1119100:intron 20.0%
!! TATAATTTACTTACATGTAC+GGG + chr7_3:67943934-67943953 Msa1119100:CDS 20.0%
!!! TTTTGCATTTTATGGTAAAA+AGG + chr7_3:67944188-67944207 Msa1119100:intron 20.0%
!!! CAAATAAGTACTTTATTTGT+AGG + chr7_3:67944781-67944800 Msa1119100:intron 20.0%
!!! CTAAAAAATTTGAAATGAAG+AGG - chr7_3:67944883-67944902 None:intergenic 20.0%
!!! AATATATCAAGGCTATTTTT+AGG - chr7_3:67945009-67945028 None:intergenic 20.0%
!!! ATCTTTTTCTTCATTTAGTT+TGG - chr7_3:67945145-67945164 None:intergenic 20.0%
!! TAAATGAAGAAAAAGATCTT+TGG + chr7_3:67945148-67945167 Msa1119100:intron 20.0%
!! TTAAACAACAGAAATATCAA+AGG - chr7_3:67945555-67945574 None:intergenic 20.0%
!!! GATTTGAAAAGAATATTTTG+GGG - chr7_3:67945629-67945648 None:intergenic 20.0%
!! AGAAATATATGCACAATATA+TGG - chr7_3:67945758-67945777 None:intergenic 20.0%
!! TTTGTATTCAAACTGAAAAT+TGG - chr7_3:67945824-67945843 None:intergenic 20.0%
!!! ATTTTCAGTTTGAATACAAA+AGG + chr7_3:67945824-67945843 Msa1119100:intron 20.0%
!! AAACTATCATATTTACTTCA+TGG - chr7_3:67945884-67945903 None:intergenic 20.0%
!! TTGTTAATAAAAAGGAGAAT+TGG - chr7_3:67945934-67945953 None:intergenic 20.0%
!! TGTTTCATAAATTTAAGAAG+TGG + chr7_3:67946283-67946302 Msa1119100:intron 20.0%
!! GTTATAAATTAGCTATTATC+TGG + chr7_3:67946458-67946477 Msa1119100:intron 20.0%
!!! ATTTTTATCAGACTAAGAAA+GGG - chr7_3:67947135-67947154 None:intergenic 20.0%
!!! TATTTTTATCAGACTAAGAA+AGG - chr7_3:67947136-67947155 None:intergenic 20.0%
!! ATAAGCAATATAGTTTAGAA+TGG - chr7_3:67947398-67947417 None:intergenic 20.0%
!!! AGTATTTTACTTGTGTTTTT+AGG + chr7_3:67947713-67947732 Msa1119100:intron 20.0%
!!! CAAAAACAAAATTTTTTGCA+GGG + chr7_3:67948243-67948262 Msa1119100:intron 20.0%
!!! ACAAGAACACAAATATTTTT+TGG - chr7_3:67948407-67948426 None:intergenic 20.0%
!!! AGTCATAATCATATTTTGAT+TGG + chr7_3:67948436-67948455 Msa1119100:intron 20.0%
!! AAAAGATCAGAATTGTATTA+GGG - chr7_3:67948773-67948792 None:intergenic 20.0%
!! ATCTGAGTAAATAAAATTAG+TGG - chr7_3:67948940-67948959 None:intergenic 20.0%
!!! AGTTGATGTTTCATATAATT+AGG + chr7_3:67949573-67949592 Msa1119100:three_prime_UTR 20.0%
!! TATAATTGATCATCTTTAGT+GGG - chr7_3:67949675-67949694 None:intergenic 20.0%
! ATTCTTCATATTCATCTCTA+AGG - chr7_3:67941237-67941256 None:intergenic 25.0%
! TTAGTACTACTTATAAGAGT+GGG + chr7_3:67941322-67941341 Msa1119100:intron 25.0%
! TTAAAAAGTTAATGATTCCC+CGG + chr7_3:67941426-67941445 Msa1119100:intron 25.0%
! TCTAAACTAAAAACTAGTAC+CGG - chr7_3:67941448-67941467 None:intergenic 25.0%
! AAGAATTTACGTTCATGAAA+AGG - chr7_3:67941475-67941494 None:intergenic 25.0%
!! ATTATTTCCCTATGTTTTTC+TGG + chr7_3:67941495-67941514 Msa1119100:intron 25.0%
! TAAATAAATACTGCAGATTG+AGG + chr7_3:67941647-67941666 Msa1119100:intron 25.0%
! TCTGAAGAGAATAATGTTAT+TGG + chr7_3:67941735-67941754 Msa1119100:CDS 25.0%
!!! AAAACAAGGTTTTATATACC+TGG - chr7_3:67941799-67941818 None:intergenic 25.0%
!!! CAAAGTTTTGTGCTATTTTT+AGG + chr7_3:67941879-67941898 Msa1119100:intron 25.0%
! GGTAACACTAAATATATGAT+TGG - chr7_3:67942072-67942091 None:intergenic 25.0%
!! AATTTTTCCTGCTTGAAATA+GGG + chr7_3:67943363-67943382 Msa1119100:intron 25.0%
! AATATGAATGAGTTTAAGCA+GGG - chr7_3:67943455-67943474 None:intergenic 25.0%
! TATCCATTTATGATTTCTCT+AGG - chr7_3:67943522-67943541 None:intergenic 25.0%
! AAATGGGAACACATTAAAAA+TGG - chr7_3:67943636-67943655 None:intergenic 25.0%
!! AATTTTCTGCAAAAGTTTCT+TGG + chr7_3:67943667-67943686 Msa1119100:intron 25.0%
! ATGATCTGTAAGTTATTAAG+TGG + chr7_3:67943707-67943726 Msa1119100:intron 25.0%
! TGATCTGTAAGTTATTAAGT+GGG + chr7_3:67943708-67943727 Msa1119100:intron 25.0%
!! AATGAGAAGTTTGCTTTATT+TGG + chr7_3:67944084-67944103 Msa1119100:CDS 25.0%
!!! TTTTATGATTTGCATGATGT+AGG + chr7_3:67944116-67944135 Msa1119100:intron 25.0%
!!! AGATATTCTTACTGATTTTG+TGG + chr7_3:67944429-67944448 Msa1119100:intron 25.0%
!! CTTCGATAATAGAATCATTT+TGG - chr7_3:67944514-67944533 None:intergenic 25.0%
!! AAGTACTTTATTTGTAGGAA+AGG + chr7_3:67944786-67944805 Msa1119100:intron 25.0%
! AAAATTAGTAAAACCAAGCT+TGG - chr7_3:67944968-67944987 None:intergenic 25.0%
! TCATGCATAAATATACTTTG+TGG - chr7_3:67945436-67945455 None:intergenic 25.0%
! CTCAAATTTATAATACGTGA+AGG + chr7_3:67945661-67945680 Msa1119100:intron 25.0%
! CCTCATCTTTGTTAATAAAA+AGG - chr7_3:67945942-67945961 None:intergenic 25.0%
!! CCTTTTTATTAACAAAGATG+AGG + chr7_3:67945939-67945958 Msa1119100:intron 25.0%
!! AAACATTTCCATAACTTTTG+GGG - chr7_3:67946268-67946287 None:intergenic 25.0%
!! GAAACATTTCCATAACTTTT+GGG - chr7_3:67946269-67946288 None:intergenic 25.0%
!! TGAAACATTTCCATAACTTT+TGG - chr7_3:67946270-67946289 None:intergenic 25.0%
! CAAAACAAAGTCATTCAAAA+AGG - chr7_3:67946746-67946765 None:intergenic 25.0%
! TTAAATACAGGTAAAATGCT+AGG + chr7_3:67946777-67946796 Msa1119100:intron 25.0%
!! TAAAATGCTAGGATGTTTTA+CGG + chr7_3:67946788-67946807 Msa1119100:CDS 25.0%
!!! CAATTGTTTTTTTGTTTACC+TGG + chr7_3:67946986-67947005 Msa1119100:intron 25.0%
!!! CATATAATCGCTATTTTTCT+AGG + chr7_3:67947206-67947225 Msa1119100:intron 25.0%
!!! GTATTGATTAAATCCATGTT+TGG + chr7_3:67947469-67947488 Msa1119100:intron 25.0%
!!! GAAAATAGTTGTTATTTGTG+AGG + chr7_3:67947533-67947552 Msa1119100:intron 25.0%
! TAACAGATGCACATTATTAA+AGG - chr7_3:67947819-67947838 None:intergenic 25.0%
! ATATGGCTAAAATATGGTAT+TGG + chr7_3:67947861-67947880 Msa1119100:intron 25.0%
!!! CAAAACTGACTTATTTTGTT+GGG - chr7_3:67947888-67947907 None:intergenic 25.0%
!! CCAAAAACAAAAATTTTGCA+GGG - chr7_3:67948012-67948031 None:intergenic 25.0%
!! TCCAAAAACAAAAATTTTGC+AGG - chr7_3:67948013-67948032 None:intergenic 25.0%
! TGACAAATCATCACATAATT+GGG - chr7_3:67948049-67948068 None:intergenic 25.0%
!!! CCTGCAAAAAATTTTGTTTT+TGG - chr7_3:67948245-67948264 None:intergenic 25.0%
!!! CCAAAAACAAAATTTTTTGC+AGG + chr7_3:67948242-67948261 Msa1119100:intron 25.0%
!!! TTTTGGCTAAAATATGGTAT+TGG - chr7_3:67948390-67948409 None:intergenic 25.0%
!!! TCAATGTTGTATTTTTTGTG+AGG + chr7_3:67948556-67948575 Msa1119100:intron 25.0%
! ACTTGTAGAATTTAGTTAGA+GGG + chr7_3:67948677-67948696 Msa1119100:intron 25.0%
! CAAAAGATCAGAATTGTATT+AGG - chr7_3:67948774-67948793 None:intergenic 25.0%
!! CTAATACAATTCTGATCTTT+TGG + chr7_3:67948772-67948791 Msa1119100:intron 25.0%
! ATATTGTTTCCAGATATCTT+TGG + chr7_3:67948881-67948900 Msa1119100:intron 25.0%
! CTTAATTAACCAAAGATATC+TGG - chr7_3:67948893-67948912 None:intergenic 25.0%
! TTGGTTAATTAAGTTCAGTA+CGG + chr7_3:67948900-67948919 Msa1119100:intron 25.0%
!!! GATGACTTTTTTCTTTTCAA+AGG - chr7_3:67949044-67949063 None:intergenic 25.0%
! TAAAAAAAAGAAAAGAGCCA+AGG + chr7_3:67949094-67949113 Msa1119100:CDS 25.0%
! AAATATGAAATTCCAGATGA+AGG + chr7_3:67949221-67949240 Msa1119100:CDS 25.0%
! AATATGAAATTCCAGATGAA+GGG + chr7_3:67949222-67949241 Msa1119100:CDS 25.0%
!! TTAGCTGGATTTTATACTAT+AGG + chr7_3:67949252-67949271 Msa1119100:three_prime_UTR 25.0%
! GTATAATTGATCATCTTTAG+TGG - chr7_3:67949676-67949695 None:intergenic 25.0%
!! AGATCAATCATATTAGTCTA+TGG - chr7_3:67949716-67949735 None:intergenic 25.0%
AAGAGAAAGAAGAAAGAGTA+AGG - chr7_3:67941038-67941057 None:intergenic 30.0%
GTTAGTACTACTTATAAGAG+TGG + chr7_3:67941321-67941340 Msa1119100:intron 30.0%
TACTTATAAGAGTGGGATAA+CGG + chr7_3:67941329-67941348 Msa1119100:intron 30.0%
TAAACTAAAAACTAGTACCG+GGG - chr7_3:67941446-67941465 None:intergenic 30.0%
CTAAACTAAAAACTAGTACC+GGG - chr7_3:67941447-67941466 None:intergenic 30.0%
TGCAATACCAGAAAAACATA+GGG - chr7_3:67941505-67941524 None:intergenic 30.0%
AGACTGAAGATCTAAATCAT+TGG - chr7_3:67941718-67941737 None:intergenic 30.0%
AAACTTTGACGTATATCCTA+TGG - chr7_3:67941867-67941886 None:intergenic 30.0%
AGAACTTGTCCAAAGAAATA+GGG - chr7_3:67941971-67941990 None:intergenic 30.0%
TAGAACTTGTCCAAAGAAAT+AGG - chr7_3:67941972-67941991 None:intergenic 30.0%
AGAGATTAATCAAACCACAA+TGG - chr7_3:67942485-67942504 None:intergenic 30.0%
AAAACCCTTAATGAGGAAAT+TGG + chr7_3:67942680-67942699 Msa1119100:intron 30.0%
AAACCCTTAATGAGGAAATT+GGG + chr7_3:67942681-67942700 Msa1119100:intron 30.0%
AACTTTCAATACAACAGAAG+AGG + chr7_3:67942758-67942777 Msa1119100:intron 30.0%
TATATTTAGCGTATCACTCT+GGG - chr7_3:67942880-67942899 None:intergenic 30.0%
ATATATTTAGCGTATCACTC+TGG - chr7_3:67942881-67942900 None:intergenic 30.0%
CAAATTTAATCAACCGTTTC+TGG + chr7_3:67942904-67942923 Msa1119100:intron 30.0%
! ATCTTCATCTTTTCCAGAAA+CGG - chr7_3:67942920-67942939 None:intergenic 30.0%
ACAAGATTGAAAGTTGTCAA+TGG - chr7_3:67943164-67943183 None:intergenic 30.0%
! AACTTTCAATCTTGTGCTTT+TGG + chr7_3:67943169-67943188 Msa1119100:intron 30.0%
ACCATGATGAAAGTTGTAAA+TGG + chr7_3:67943230-67943249 Msa1119100:intron 30.0%
TCCATTTACAACTTTCATCA+TGG - chr7_3:67943234-67943253 None:intergenic 30.0%
TAAAAGATACTGAAGTAGAG+AGG + chr7_3:67943306-67943325 Msa1119100:intron 30.0%
! CAATTTTTCCTGCTTGAAAT+AGG + chr7_3:67943362-67943381 Msa1119100:intron 30.0%
GAATATGAATGAGTTTAAGC+AGG - chr7_3:67943456-67943475 None:intergenic 30.0%
GGTTCAAATTGCTTTAACTA+GGG - chr7_3:67943501-67943520 None:intergenic 30.0%
AGGTTCAAATTGCTTTAACT+AGG - chr7_3:67943502-67943521 None:intergenic 30.0%
GAACCTAGAGAAATCATAAA+TGG + chr7_3:67943516-67943535 Msa1119100:intron 30.0%
GCGAGCAAATTATAATGATA+TGG - chr7_3:67943565-67943584 None:intergenic 30.0%
TAAAAATGGTGCATATGACA+GGG - chr7_3:67943622-67943641 None:intergenic 30.0%
TTAAAAATGGTGCATATGAC+AGG - chr7_3:67943623-67943642 None:intergenic 30.0%
GTTTGCACTTATGTATGTAT+TGG + chr7_3:67943831-67943850 Msa1119100:intron 30.0%
ATGAAACATTTGAATGATGC+TGG - chr7_3:67943900-67943919 None:intergenic 30.0%
!! AGAAGTTTGCTTTATTTGGA+GGG + chr7_3:67944088-67944107 Msa1119100:CDS 30.0%
AAAAAGGAAAGAAAGAGTGA+AGG + chr7_3:67944204-67944223 Msa1119100:intron 30.0%
AAGGATATTCAACTACTAGA+GGG + chr7_3:67944223-67944242 Msa1119100:intron 30.0%
AAGAATATCTGCAGTACTAT+AGG - chr7_3:67944419-67944438 None:intergenic 30.0%
TAATTCATGTTTCAGCAGTA+AGG - chr7_3:67944576-67944595 None:intergenic 30.0%
TTCTTGAAGGTTATGGTAAA+GGG - chr7_3:67944699-67944718 None:intergenic 30.0%
ATTCTTGAAGGTTATGGTAA+AGG - chr7_3:67944700-67944719 None:intergenic 30.0%
GTTTAGATTCTTGAAGGTTA+TGG - chr7_3:67944706-67944725 None:intergenic 30.0%
!!! CGTTTTGTTTAGATTCTTGA+AGG - chr7_3:67944712-67944731 None:intergenic 30.0%
!! TTTGTTATTTCTCATGTGTC+AGG - chr7_3:67944765-67944784 None:intergenic 30.0%
!! AAGGCGTTGAAGTTAATATT+TGG + chr7_3:67944805-67944824 Msa1119100:CDS 30.0%
!! AGGCGTTGAAGTTAATATTT+GGG + chr7_3:67944806-67944825 Msa1119100:CDS 30.0%
!! CGTTTTAGCATAAGATAAAG+TGG - chr7_3:67944926-67944945 None:intergenic 30.0%
!!! GTTTTTTGTTTTACCAAGCT+TGG + chr7_3:67944952-67944971 Msa1119100:intron 30.0%
!!! ATATCAAGGCTATTTTTAGG+AGG - chr7_3:67945006-67945025 None:intergenic 30.0%
!! TAAAAGTACCTGATGGTTAT+TGG - chr7_3:67945100-67945119 None:intergenic 30.0%
! TATATTTTATCAAGAGGGAG+TGG + chr7_3:67945300-67945319 Msa1119100:intron 30.0%
ATTAATAACCACTCTCAATC+TGG + chr7_3:67945357-67945376 Msa1119100:intron 30.0%
! TATATTTTATCAAGAGGGAG+TGG + chr7_3:67945300-67945319 Msa1119100:intron 30.0%
GCATGAATACTTTATTGTCA+TGG + chr7_3:67945450-67945469 Msa1119100:intron 30.0%
ATATGGTAGAGAGAAACAAT+GGG - chr7_3:67945741-67945760 None:intergenic 30.0%
TATATGGTAGAGAGAAACAA+TGG - chr7_3:67945742-67945761 None:intergenic 30.0%
CACACATATATATGTAGACA+CGG - chr7_3:67945801-67945820 None:intergenic 30.0%
TGAGGAGAATGAGAATAATA+TGG + chr7_3:67945957-67945976 Msa1119100:intron 30.0%
! AACATTTCCATAACTTTTGG+GGG - chr7_3:67946267-67946286 None:intergenic 30.0%
CATTTCATTTGTCTTCTAGT+TGG + chr7_3:67946720-67946739 Msa1119100:intron 30.0%
! AAAATGCTAGGATGTTTTAC+GGG + chr7_3:67946789-67946808 Msa1119100:CDS 30.0%
AAAGAACATGCAACACATAA+GGG - chr7_3:67946901-67946920 None:intergenic 30.0%
TCATTGATGAAGTCTTGAAT+TGG + chr7_3:67946937-67946956 Msa1119100:intron 30.0%
! TAAGATTATAATTTGGCTCC+AGG - chr7_3:67947007-67947026 None:intergenic 30.0%
GATTATATGAGTAATAGTGG+TGG - chr7_3:67947195-67947214 None:intergenic 30.0%
AGCGATTATATGAGTAATAG+TGG - chr7_3:67947198-67947217 None:intergenic 30.0%
TCTGAAAAGGACAAAGAAAA+AGG - chr7_3:67947300-67947319 None:intergenic 30.0%
! TAGCAATAGCAATTCTGAAA+AGG - chr7_3:67947313-67947332 None:intergenic 30.0%
! ACTAATAGACTTTAGCTCAT+AGG - chr7_3:67947441-67947460 None:intergenic 30.0%
ACAATATCTTTCTCCAAACA+TGG - chr7_3:67947485-67947504 None:intergenic 30.0%
TTTGTGAGGTTAGTAAAAAG+AGG + chr7_3:67947547-67947566 Msa1119100:intron 30.0%
TTGTGAGGTTAGTAAAAAGA+GGG + chr7_3:67947548-67947567 Msa1119100:intron 30.0%
AGTCATTTACATGTGTTTCT+AGG - chr7_3:67947614-67947633 None:intergenic 30.0%
TAAATGACTAAAAAACCCAG+CGG + chr7_3:67947625-67947644 Msa1119100:intron 30.0%
AAAACAACTATGACAGTCAT+TGG - chr7_3:67947793-67947812 None:intergenic 30.0%
!!! CCAAAACTGACTTATTTTGT+TGG - chr7_3:67947889-67947908 None:intergenic 30.0%
! CCAACAAAATAAGTCAGTTT+TGG + chr7_3:67947886-67947905 Msa1119100:intron 30.0%
!!! AAAACTGACCTATTTTTGCA+GGG - chr7_3:67947949-67947968 None:intergenic 30.0%
!!! CCCTGCAAAATTTTTGTTTT+TGG + chr7_3:67948009-67948028 Msa1119100:intron 30.0%
GACAAATCATCACATAATTG+GGG - chr7_3:67948048-67948067 None:intergenic 30.0%
GTGACAAATCATCACATAAT+TGG - chr7_3:67948050-67948069 None:intergenic 30.0%
TGACAAATCATCACATAACT+GGG + chr7_3:67948205-67948224 Msa1119100:intron 30.0%
!!! ATCATATTTTGATTGGTTGC+AGG + chr7_3:67948443-67948462 Msa1119100:intron 30.0%
TCAAAAAGAACATGCAGAAT+AGG - chr7_3:67948483-67948502 None:intergenic 30.0%
GATTCCAATTTCATTGTTGA+AGG + chr7_3:67948501-67948520 Msa1119100:CDS 30.0%
CTAACCTTCAACAATGAAAT+TGG - chr7_3:67948508-67948527 None:intergenic 30.0%
CACTTGTAGAATTTAGTTAG+AGG + chr7_3:67948676-67948695 Msa1119100:intron 30.0%
CTTGTAGAATTTAGTTAGAG+GGG + chr7_3:67948678-67948697 Msa1119100:intron 30.0%
TACAATATGAAGAAACAGCT+AGG - chr7_3:67948854-67948873 None:intergenic 30.0%
AGAAACTATGAAAGAGATCA+CGG + chr7_3:67948995-67949014 Msa1119100:CDS 30.0%
AAATGATGAACATGAGAAGA+CGG + chr7_3:67949145-67949164 Msa1119100:CDS 30.0%
ACTATAGGATATATACACCA+AGG + chr7_3:67949267-67949286 Msa1119100:three_prime_UTR 30.0%
AAGGATTCCAAACTAACATT+GGG + chr7_3:67949286-67949305 Msa1119100:three_prime_UTR 30.0%
TACTTTATGGTGAAGTTACT+AGG + chr7_3:67949365-67949384 Msa1119100:three_prime_UTR 30.0%
! ACAGTCAATCCTATTTTCTT+AGG + chr7_3:67949501-67949520 Msa1119100:three_prime_UTR 30.0%
! ATTTTCACGCCTAAGAAAAT+AGG - chr7_3:67949513-67949532 None:intergenic 30.0%
!! TTAACGGACTTAGTTGAATC+GGG - chr7_3:67941122-67941141 None:intergenic 35.0%
!! GTTAACGGACTTAGTTGAAT+CGG - chr7_3:67941123-67941142 None:intergenic 35.0%
AATGAGTGAAACAGCGTTAA+CGG - chr7_3:67941138-67941157 None:intergenic 35.0%
AGAGAAAGAAGAAAACGTAC+CGG - chr7_3:67941176-67941195 None:intergenic 35.0%
ACTTATAAGAGTGGGATAAC+GGG + chr7_3:67941330-67941349 Msa1119100:intron 35.0%
! ATTGCTACTTCCAGCTTTAA+AGG - chr7_3:67941407-67941426 None:intergenic 35.0%
CTGCAATACCAGAAAAACAT+AGG - chr7_3:67941506-67941525 None:intergenic 35.0%
TTAGCTGTGGCAAGAAAAAA+TGG + chr7_3:67941529-67941548 Msa1119100:CDS 35.0%
TGGATTCAAACTCAAGATTC+TGG - chr7_3:67941779-67941798 None:intergenic 35.0%
AGAATCTTGAGTTTGAATCC+AGG + chr7_3:67941778-67941797 Msa1119100:CDS 35.0%
TATTGTTGTGTGAATGCCAT+AGG + chr7_3:67941848-67941867 Msa1119100:intron 35.0%
TAGTCTCACAACTATCTAGA+AGG - chr7_3:67941934-67941953 None:intergenic 35.0%
TAGATAGTTGTGAGACTACT+TGG + chr7_3:67941936-67941955 Msa1119100:intron 35.0%
AGATAGTTGTGAGACTACTT+GGG + chr7_3:67941937-67941956 Msa1119100:intron 35.0%
! GTTATATGGCCCTATTTCTT+TGG + chr7_3:67941959-67941978 Msa1119100:intron 35.0%
AGAATATGGTCGATGGTAAT+TGG - chr7_3:67942093-67942112 None:intergenic 35.0%
TAAGTCAAGAATATGGTCGA+TGG - chr7_3:67942100-67942119 None:intergenic 35.0%
CTTGTTTAAGTACTTTGCGT+AGG + chr7_3:67942192-67942211 Msa1119100:intron 35.0%
TAATCTCTACAATTGCGCTT+AGG + chr7_3:67942497-67942516 Msa1119100:intron 35.0%
TCCAATTACAACCTTCATCA+TGG + chr7_3:67942557-67942576 Msa1119100:intron 35.0%
ACCATGATGAAGGTTGTAAT+TGG - chr7_3:67942561-67942580 None:intergenic 35.0%
!! AGATGGATTGTGTTTGCATT+TGG - chr7_3:67942591-67942610 None:intergenic 35.0%
GTGTTTATGGACATATGAGA+TGG - chr7_3:67942608-67942627 None:intergenic 35.0%
CTTCCCAATTTCCTCATTAA+GGG - chr7_3:67942687-67942706 None:intergenic 35.0%
TCTTCCCAATTTCCTCATTA+AGG - chr7_3:67942688-67942707 None:intergenic 35.0%
TAATGAGGAAATTGGGAAGA+TGG + chr7_3:67942688-67942707 Msa1119100:intron 35.0%
AATGAGGAAATTGGGAAGAT+GGG + chr7_3:67942689-67942708 Msa1119100:intron 35.0%
TGAAAGTTTCCAACCATTCA+CGG - chr7_3:67942746-67942765 None:intergenic 35.0%
ACTATAGTTGCTTGCTTGAA+TGG - chr7_3:67942967-67942986 None:intergenic 35.0%
AGAGGCTTCAAAAGCTTATA+AGG - chr7_3:67943040-67943059 None:intergenic 35.0%
TCTTTACAGGTACCTCTAAT+CGG + chr7_3:67943057-67943076 Msa1119100:intron 35.0%
AATTGCTTTAACTAGGGATC+AGG - chr7_3:67943495-67943514 None:intergenic 35.0%
AAAAATGGTGCATATGACAG+GGG - chr7_3:67943621-67943640 None:intergenic 35.0%
TGCAAAAGTTTCTTGGACAA+TGG + chr7_3:67943674-67943693 Msa1119100:intron 35.0%
ACCTGGAATGTTTGTAATAG+TGG + chr7_3:67944033-67944052 Msa1119100:CDS 35.0%
ACCACTATTACAAACATTCC+AGG - chr7_3:67944037-67944056 None:intergenic 35.0%
!! GAGAAGTTTGCTTTATTTGG+AGG + chr7_3:67944087-67944106 Msa1119100:CDS 35.0%
GAATGCACATGACTATTGAA+CGG + chr7_3:67944156-67944175 Msa1119100:intron 35.0%
GAAGGATATTCAACTACTAG+AGG + chr7_3:67944222-67944241 Msa1119100:intron 35.0%
GCTTCTGTCGTAGAAAATAA+CGG - chr7_3:67944323-67944342 None:intergenic 35.0%
! TTATTTTCTACGACAGAAGC+AGG + chr7_3:67944323-67944342 Msa1119100:intron 35.0%
! TATTTTCTACGACAGAAGCA+GGG + chr7_3:67944324-67944343 Msa1119100:intron 35.0%
ATATGGCAGCATAAGCTATA+CGG - chr7_3:67944387-67944406 None:intergenic 35.0%
ACTATAGGAGTCTGGAAATA+TGG - chr7_3:67944404-67944423 None:intergenic 35.0%
! GAAGTGTTATCTGTCACAAA+GGG - chr7_3:67944490-67944509 None:intergenic 35.0%
! TGAAGTGTTATCTGTCACAA+AGG - chr7_3:67944491-67944510 None:intergenic 35.0%
! TTTGAAATGAAGAGGGTTCA+TGG - chr7_3:67944875-67944894 None:intergenic 35.0%
AGGTAGGTGTGAATATATCA+AGG - chr7_3:67945020-67945039 None:intergenic 35.0%
TTGATATATTCACACCTACC+TGG + chr7_3:67945019-67945038 Msa1119100:CDS 35.0%
ATATGAAACAGATGTGAACC+AGG - chr7_3:67945040-67945059 None:intergenic 35.0%
!! CACTGATTAAAAGTACCTGA+TGG - chr7_3:67945107-67945126 None:intergenic 35.0%
GAAGTATATCAGCATCAAAG+AGG - chr7_3:67945195-67945214 None:intergenic 35.0%
GATGCTGATATACTTCAACT+AGG + chr7_3:67945199-67945218 Msa1119100:intron 35.0%
ACTTCAACTAGGTGTATTAG+AGG + chr7_3:67945210-67945229 Msa1119100:intron 35.0%
CTTCAACTAGGTGTATTAGA+GGG + chr7_3:67945211-67945230 Msa1119100:intron 35.0%
TGTACTAGAGATGTTTGAGA+AGG + chr7_3:67945334-67945353 Msa1119100:intron 35.0%
ATAGCCAATCTTTCATGCAA+AGG + chr7_3:67945476-67945495 Msa1119100:intron 35.0%
CAATCCTTTGCATGAAAGAT+TGG - chr7_3:67945483-67945502 None:intergenic 35.0%
!! GAATATTTTGGGGACTCTTT+GGG - chr7_3:67945619-67945638 None:intergenic 35.0%
!! AGAATATTTTGGGGACTCTT+TGG - chr7_3:67945620-67945639 None:intergenic 35.0%
!! ATGTAGACACGGCTTTAAAA+AGG - chr7_3:67945790-67945809 None:intergenic 35.0%
!! TACTCTTCCATTTTTAACGC+TGG + chr7_3:67946071-67946090 Msa1119100:intron 35.0%
TCTGAGCAGATATGTCATAA+AGG - chr7_3:67946114-67946133 None:intergenic 35.0%
TTTATGACATATCTGCTCAG+AGG + chr7_3:67946113-67946132 Msa1119100:CDS 35.0%
CGAAAATCAATAGAGAGAAC+AGG - chr7_3:67946142-67946161 None:intergenic 35.0%
ATGGCAACACAATCTATCTA+GGG + chr7_3:67946197-67946216 Msa1119100:CDS 35.0%
AACACAATCTATCTAGGGAA+TGG + chr7_3:67946202-67946221 Msa1119100:CDS 35.0%
ACACAATCTATCTAGGGAAT+GGG + chr7_3:67946203-67946222 Msa1119100:CDS 35.0%
! ACATTTCCATAACTTTTGGG+GGG - chr7_3:67946266-67946285 None:intergenic 35.0%
CAGTTACAGATGGAAAAATG+AGG - chr7_3:67946377-67946396 None:intergenic 35.0%
CCAAAATGTTCAGTTACAGA+TGG - chr7_3:67946387-67946406 None:intergenic 35.0%
! CCATCTGTAACTGAACATTT+TGG + chr7_3:67946384-67946403 Msa1119100:intron 35.0%
AAATTAGCTATTATCTGGCG+AGG + chr7_3:67946463-67946482 Msa1119100:intron 35.0%
AATTAGCTATTATCTGGCGA+GGG + chr7_3:67946464-67946483 Msa1119100:intron 35.0%
GTAATTAAGATGAGCCTTTG+TGG + chr7_3:67946612-67946631 Msa1119100:intron 35.0%
CATCAAAGAAAAAGCCACAA+AGG - chr7_3:67946629-67946648 None:intergenic 35.0%
AGAGACAATTGATTGTCAAC+TGG + chr7_3:67946652-67946671 Msa1119100:intron 35.0%
GAAAGAACATGCAACACATA+AGG - chr7_3:67946902-67946921 None:intergenic 35.0%
TTCAGAAGAAATCATGCTCA+AGG - chr7_3:67947047-67947066 None:intergenic 35.0%
!!! AATCGCTATTTTTCTAGGAC+TGG + chr7_3:67947211-67947230 Msa1119100:intron 35.0%
! AAGAGGGTACATTTGTAAGA+TGG + chr7_3:67947564-67947583 Msa1119100:intron 35.0%
!!! GTTTTCTAGTTATAAGCCAG+CGG + chr7_3:67947664-67947683 Msa1119100:intron 35.0%
!! TTTTTGGTCCCTGCAAAAAT+AGG + chr7_3:67947938-67947957 Msa1119100:intron 35.0%
!!! CAAAACTGACCTATTTTTGC+AGG - chr7_3:67947950-67947969 None:intergenic 35.0%
! CTGCAAAAATAGGTCAGTTT+TGG + chr7_3:67947948-67947967 Msa1119100:intron 35.0%
!!! TTGTCACTTTTGTGCATATG+TGG + chr7_3:67948063-67948082 Msa1119100:intron 35.0%
GTGACAAATCATCACATAAC+TGG + chr7_3:67948204-67948223 Msa1119100:intron 35.0%
GACAAATCATCACATAACTG+GGG + chr7_3:67948206-67948225 Msa1119100:intron 35.0%
!!! AAAACTGGCCTATTTTTGCT+GGG + chr7_3:67948304-67948323 Msa1119100:intron 35.0%
!! TTTTTGGTCCCAGCAAAAAT+AGG - chr7_3:67948315-67948334 None:intergenic 35.0%
AGGGAAATCTGAAGAGAAAA+CGG - chr7_3:67948754-67948773 None:intergenic 35.0%
TTCTTTCTGCCTTAAATGCA+TGG + chr7_3:67948828-67948847 Msa1119100:intron 35.0%
ATTTACTCAGATACACCCAA+AGG + chr7_3:67948948-67948967 Msa1119100:intron 35.0%
TTCATAGTTTCTTCCTTGCT+TGG - chr7_3:67948987-67949006 None:intergenic 35.0%
GAAGAACACACAAAATCCAA+AGG + chr7_3:67949122-67949141 Msa1119100:CDS 35.0%
CTCATGTTCATCATTTCCTT+TGG - chr7_3:67949141-67949160 None:intergenic 35.0%
! CAATGTTAGTTTGGAATCCT+TGG - chr7_3:67949287-67949306 None:intergenic 35.0%
CAAGGATTCCAAACTAACAT+TGG + chr7_3:67949285-67949304 Msa1119100:three_prime_UTR 35.0%
CATACATCCCAATGTTAGTT+TGG - chr7_3:67949296-67949315 None:intergenic 35.0%
CTAACATTGGGATGTATGTA+TGG + chr7_3:67949298-67949317 Msa1119100:three_prime_UTR 35.0%
!! CAGGAGTTTGTGTTACTTTA+TGG + chr7_3:67949352-67949371 Msa1119100:three_prime_UTR 35.0%
TTATGGTGAAGTTACTAGGA+TGG + chr7_3:67949369-67949388 Msa1119100:three_prime_UTR 35.0%
!! TTACTAGGATGGTTAGTTTG+TGG + chr7_3:67949380-67949399 Msa1119100:three_prime_UTR 35.0%
TGTTGGAGGTTAACTATTGT+TGG - chr7_3:67949444-67949463 None:intergenic 35.0%
ACAATAGTTAACCTCCAACA+TGG + chr7_3:67949444-67949463 Msa1119100:three_prime_UTR 35.0%
ATGCAAAACATTGTTGAGAG+AGG + chr7_3:67949645-67949664 Msa1119100:three_prime_UTR 35.0%
TATGGTTGATCTCGTTGAAA+AGG - chr7_3:67949698-67949717 None:intergenic 35.0%
!!! GCGATTTTGGAACAAACAGA+AGG - chr7_3:67940859-67940878 None:intergenic 40.0%
! ATTTTGCAGCAACCCAACTA+CGG - chr7_3:67940895-67940914 None:intergenic 40.0%
!! AAGGTTAAAGCTCTAAGTGG+AGG - chr7_3:67940952-67940971 None:intergenic 40.0%
! TCCACTTAGAGCTTTAACCT+TGG + chr7_3:67940951-67940970 Msa1119100:CDS 40.0%
!! TCCAAGGTTAAAGCTCTAAG+TGG - chr7_3:67940955-67940974 None:intergenic 40.0%
!! GACACACTTGGTCTTATCAA+AGG + chr7_3:67940973-67940992 Msa1119100:CDS 40.0%
ATCGAATCCCGTGAAAAACA+AGG + chr7_3:67941065-67941084 Msa1119100:CDS 40.0%
GAGAAAGAAGAAAACGTACC+GGG - chr7_3:67941175-67941194 None:intergenic 40.0%
CTTATAAGAGTGGGATAACG+GGG + chr7_3:67941331-67941350 Msa1119100:intron 40.0%
GGTATTGCAGTTATTAGCTG+TGG + chr7_3:67941516-67941535 Msa1119100:intron 40.0%
TGTGGCAAGAAAAAATGGAC+AGG + chr7_3:67941534-67941553 Msa1119100:CDS 40.0%
AAATGGACAGGTAAGCTACT+TGG + chr7_3:67941546-67941565 Msa1119100:intron 40.0%
!! CTACTTGGCGGTTTTATACT+TGG + chr7_3:67941561-67941580 Msa1119100:intron 40.0%
GTGAGACTACTTGGGTTATA+TGG + chr7_3:67941945-67941964 Msa1119100:intron 40.0%
TAAGTACTTTGCGTAGGCAA+AGG + chr7_3:67942198-67942217 Msa1119100:intron 40.0%
AGGATTTGAGAGGAGAGAAT+TGG + chr7_3:67942218-67942237 Msa1119100:intron 40.0%
GGATTTGAGAGGAGAGAATT+GGG + chr7_3:67942219-67942238 Msa1119100:intron 40.0%
!!! GAGAGTTTTGTTGTCCATTG+TGG + chr7_3:67942468-67942487 Msa1119100:intron 40.0%
TGGATTGTGTTTGCATTTGG+CGG - chr7_3:67942588-67942607 None:intergenic 40.0%
!! ATTCACGGGTAGCTTTAACT+GGG - chr7_3:67942731-67942750 None:intergenic 40.0%
GAAAGTTTCCAACCATTCAC+GGG - chr7_3:67942745-67942764 None:intergenic 40.0%
!!! AGCTTTTGAAGCCTCTTTAC+AGG + chr7_3:67943044-67943063 Msa1119100:intron 40.0%
!! GATTAGAGGTACCTGTAAAG+AGG - chr7_3:67943058-67943077 None:intergenic 40.0%
CTTTACAGGTACCTCTAATC+GGG + chr7_3:67943058-67943077 Msa1119100:intron 40.0%
GAAAATCGTAACCCGATTAG+AGG - chr7_3:67943072-67943091 None:intergenic 40.0%
TAATGAGGAATCGTGGAGAT+GGG - chr7_3:67943100-67943119 None:intergenic 40.0%
TTAATGAGGAATCGTGGAGA+TGG - chr7_3:67943101-67943120 None:intergenic 40.0%
ATCTCCACGATTCCTCATTA+AGG + chr7_3:67943100-67943119 Msa1119100:intron 40.0%
TCTCCACGATTCCTCATTAA+GGG + chr7_3:67943101-67943120 Msa1119100:intron 40.0%
AGACACAAACACCCTTAATG+AGG - chr7_3:67943115-67943134 None:intergenic 40.0%
! GTGCTTTTGGATACATGAGA+TGG + chr7_3:67943182-67943201 Msa1119100:intron 40.0%
ACATTTCCTACGTGCAATTG+CGG + chr7_3:67943279-67943298 Msa1119100:intron 40.0%
GCCAATAGAGTCTTGAAACA+CGG + chr7_3:67943328-67943347 Msa1119100:intron 40.0%
AGTCTTGAAACACGGCATAA+TGG + chr7_3:67943336-67943355 Msa1119100:intron 40.0%
GTCTTGAAACACGGCATAAT+GGG + chr7_3:67943337-67943356 Msa1119100:intron 40.0%
TACATTGCCCTATTTCAAGC+AGG - chr7_3:67943373-67943392 None:intergenic 40.0%
TCATATTCAGTCCCTCGTAA+TGG + chr7_3:67943468-67943487 Msa1119100:intron 40.0%
TGGAGAATTAACAGTGGTGT+AGG - chr7_3:67943593-67943612 None:intergenic 40.0%
AAAATGGTGCATATGACAGG+GGG - chr7_3:67943620-67943639 None:intergenic 40.0%
TTACTTACATGTACGGGCAA+AGG + chr7_3:67943940-67943959 Msa1119100:CDS 40.0%
TACTTACATGTACGGGCAAA+GGG + chr7_3:67943941-67943960 Msa1119100:CDS 40.0%
!! GGTTTTTGAAGAATCGATGC+TGG - chr7_3:67944016-67944035 None:intergenic 40.0%
!! GCATCGATTCTTCAAAAACC+TGG + chr7_3:67944016-67944035 Msa1119100:CDS 40.0%
! AGGGTTCTGATTTGATGATC+AGG + chr7_3:67944242-67944261 Msa1119100:intron 40.0%
! ATTTTCTACGACAGAAGCAG+GGG + chr7_3:67944325-67944344 Msa1119100:intron 40.0%
! TCTGTCACAAAGGGTATACT+TGG - chr7_3:67944481-67944500 None:intergenic 40.0%
! TTGATAACTGCACGAAGATC+TGG + chr7_3:67944832-67944851 Msa1119100:CDS 40.0%
!!! CTATTTTTAGGAGGCTGCAT+AGG - chr7_3:67944997-67945016 None:intergenic 40.0%
!! GACCATCGAAAATTTGTTGC+TGG + chr7_3:67945072-67945091 Msa1119100:CDS 40.0%
! TGCCAGCAACAAATTTTCGA+TGG - chr7_3:67945077-67945096 None:intergenic 40.0%
TGTACTAGAGACGTTTGAGA+AGG + chr7_3:67945234-67945253 Msa1119100:intron 40.0%
AGATATAGCATGCAGCATTC+AGG - chr7_3:67945911-67945930 None:intergenic 40.0%
CAAAGGACCAGCGTTAAAAA+TGG - chr7_3:67946081-67946100 None:intergenic 40.0%
ATAAAGGCGAACCTGTTCAA+AGG - chr7_3:67946098-67946117 None:intergenic 40.0%
TGAGACACCAATTAAAGCAC+TGG + chr7_3:67946162-67946181 Msa1119100:CDS 40.0%
TGTGTTGCCATCTATATCCT+CGG - chr7_3:67946188-67946207 None:intergenic 40.0%
GATGGCAACACAATCTATCT+AGG + chr7_3:67946196-67946215 Msa1119100:CDS 40.0%
GCTTCTGTTGATATACGTAC+AGG + chr7_3:67946238-67946257 Msa1119100:CDS 40.0%
! TGTTTTACGGGAAAATGCTC+TGG + chr7_3:67946801-67946820 Msa1119100:CDS 40.0%
AATCATGCTCAAGGTCGATA+TGG - chr7_3:67947038-67947057 None:intergenic 40.0%
AGTACAGAGCATGTAGTTAC+TGG + chr7_3:67947078-67947097 Msa1119100:intron 40.0%
!! ATGAGTAATAGTGGTGGACA+TGG - chr7_3:67947189-67947208 None:intergenic 40.0%
!!! GCTATTTTTCTAGGACTGGA+TGG + chr7_3:67947215-67947234 Msa1119100:intron 40.0%
TGGATGGCTATTTACGACTT+TGG + chr7_3:67947231-67947250 Msa1119100:CDS 40.0%
GGATGGCTATTTACGACTTT+GGG + chr7_3:67947232-67947251 Msa1119100:CDS 40.0%
!! GACTTTGGGATACAAAGACA+AGG + chr7_3:67947246-67947265 Msa1119100:CDS 40.0%
AGTTGTAGTTAACTACCGCT+GGG - chr7_3:67947643-67947662 None:intergenic 40.0%
TCCATTTGTAAACATGAGCC+TGG + chr7_3:67947763-67947782 Msa1119100:intron 40.0%
CCATTTGTAAACATGAGCCT+GGG + chr7_3:67947764-67947783 Msa1119100:intron 40.0%
TCATCACATAATTGGGGTCA+GGG - chr7_3:67948042-67948061 None:intergenic 40.0%
ATCATCACATAATTGGGGTC+AGG - chr7_3:67948043-67948062 None:intergenic 40.0%
! CAGCAAAAATAGGCCAGTTT+TGG - chr7_3:67948305-67948324 None:intergenic 40.0%
!!! CAAAACTGGCCTATTTTTGC+TGG + chr7_3:67948303-67948322 Msa1119100:intron 40.0%
!! CAAAACTGGCCTATTTTGCA+GGG + chr7_3:67948363-67948382 Msa1119100:intron 40.0%
GTGAGGTTATTTGTGATGTC+AGG + chr7_3:67948573-67948592 Msa1119100:intron 40.0%
TGCAATAGATCCATTGGGAA+TGG + chr7_3:67948702-67948721 Msa1119100:intron 40.0%
GCAATAGATCCATTGGGAAT+GGG + chr7_3:67948703-67948722 Msa1119100:intron 40.0%
GGAAATCTGAAGAGAAAACG+GGG - chr7_3:67948752-67948771 None:intergenic 40.0%
GGGAAATCTGAAGAGAAAAC+GGG - chr7_3:67948753-67948772 None:intergenic 40.0%
ACTATGAAAGAGATCACGGA+TGG + chr7_3:67948999-67949018 Msa1119100:CDS 40.0%
CTATGAAAGAGATCACGGAT+GGG + chr7_3:67949000-67949019 Msa1119100:CDS 40.0%
TATGAAAGAGATCACGGATG+GGG + chr7_3:67949001-67949020 Msa1119100:CDS 40.0%
CTAAATCACAACCCTTCATC+TGG - chr7_3:67949236-67949255 None:intergenic 40.0%
ATGAAGGGTTGTGATTTAGC+TGG + chr7_3:67949237-67949256 Msa1119100:exon 40.0%
TGGGATGTATGTATGGTGAT+TGG + chr7_3:67949305-67949324 Msa1119100:three_prime_UTR 40.0%
!! TGTATGGTGATTGGTGATGA+AGG + chr7_3:67949314-67949333 Msa1119100:three_prime_UTR 40.0%
ATAGTTAACCTCCAACATGG+AGG + chr7_3:67949447-67949466 Msa1119100:three_prime_UTR 40.0%
GCTTTAACCTTGGACACACT+TGG + chr7_3:67940961-67940980 Msa1119100:CDS 45.0%
GATAAGACCAAGTGTGTCCA+AGG - chr7_3:67940971-67940990 None:intergenic 45.0%
GAATCCCGTGAAAAACAAGG+AGG + chr7_3:67941068-67941087 Msa1119100:CDS 45.0%
!!! TGGGACCTCCTTGTTTTTCA+CGG - chr7_3:67941076-67941095 None:intergenic 45.0%
TGAAAAACAAGGAGGTCCCA+AGG + chr7_3:67941076-67941095 Msa1119100:CDS 45.0%
TCCCAAGGTAGTAGATAGGT+GGG + chr7_3:67941091-67941110 Msa1119100:CDS 45.0%
CATTGATCGCAAATCCAACC+CGG + chr7_3:67941154-67941173 Msa1119100:CDS 45.0%
AAGAAGAAAACGTACCGGGT+TGG - chr7_3:67941171-67941190 None:intergenic 45.0%
!! CAGTGCATGTCCTTTAAAGC+TGG + chr7_3:67941394-67941413 Msa1119100:intron 45.0%
CTAGAGAAACTCCAGTGACA+GGG - chr7_3:67941680-67941699 None:intergenic 45.0%
TTGAGAGGAGAGAATTGGGT+AGG + chr7_3:67942223-67942242 Msa1119100:intron 45.0%
ATTGTGTTTGCATTTGGCGG+AGG - chr7_3:67942585-67942604 None:intergenic 45.0%
!! CATTCACGGGTAGCTTTAAC+TGG - chr7_3:67942732-67942751 None:intergenic 45.0%
CAGTTAAAGCTACCCGTGAA+TGG + chr7_3:67942730-67942749 Msa1119100:intron 45.0%
TAAAGCTACCCGTGAATGGT+TGG + chr7_3:67942734-67942753 Msa1119100:intron 45.0%
ACACCCTTAATGAGGAATCG+TGG - chr7_3:67943107-67943126 None:intergenic 45.0%
!! GATGGATTGTGTTTGCGACA+TGG + chr7_3:67943200-67943219 Msa1119100:intron 45.0%
GCCGTGTTTCAAGACTCTAT+TGG - chr7_3:67943332-67943351 None:intergenic 45.0%
GGCACATGGAGAATTAACAG+TGG - chr7_3:67943599-67943618 None:intergenic 45.0%
GCAAAGGGAATGCAAGCATA+AGG + chr7_3:67943956-67943975 Msa1119100:CDS 45.0%
CGCTGAATCAGGAACTTCAA+GGG - chr7_3:67943983-67944002 None:intergenic 45.0%
TCGCTGAATCAGGAACTTCA+AGG - chr7_3:67943984-67944003 None:intergenic 45.0%
! TGGTAACGTCTTGTGTTGCA+AGG + chr7_3:67944053-67944072 Msa1119100:CDS 45.0%
TAACGTCTTGTGTTGCAAGG+TGG + chr7_3:67944056-67944075 Msa1119100:CDS 45.0%
GCTATACGGCTAAAGCTCAA+TGG - chr7_3:67944373-67944392 None:intergenic 45.0%
TCTGCAGTACTATAGGAGTC+TGG - chr7_3:67944412-67944431 None:intergenic 45.0%
GAAACAGATGTGAACCAGGT+AGG - chr7_3:67945036-67945055 None:intergenic 45.0%
TTAACGCTGGTCCTTTGAAC+AGG + chr7_3:67946084-67946103 Msa1119100:intron 45.0%
ATCTATCTAGGGAATGGGTC+TGG + chr7_3:67946208-67946227 Msa1119100:CDS 45.0%
ATTATCTGGCGAGGGTAGTT+TGG + chr7_3:67946472-67946491 Msa1119100:intron 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr7_3:67946538-67946557 Msa1119100:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr7_3:67946539-67946558 Msa1119100:intron 45.0%
! GAAGCATCAGATCCATTGTC+AGG + chr7_3:67946823-67946842 Msa1119100:CDS 45.0%
AGGCAGCTTCTTTCATCTGT+AGG + chr7_3:67947266-67947285 Msa1119100:CDS 45.0%
CAGTTGTAGTTAACTACCGC+TGG - chr7_3:67947644-67947663 None:intergenic 45.0%
CAGCGGTAGTTAACTACAAC+TGG + chr7_3:67947642-67947661 Msa1119100:intron 45.0%
AGCGGTAGTTAACTACTGCT+GGG + chr7_3:67947682-67947701 Msa1119100:intron 45.0%
CCCAGGCTCATGTTTACAAA+TGG - chr7_3:67947767-67947786 None:intergenic 45.0%
ATCATCACATAACTGGGGTC+AGG + chr7_3:67948211-67948230 Msa1119100:intron 45.0%
TCATCACATAACTGGGGTCA+GGG + chr7_3:67948212-67948231 Msa1119100:intron 45.0%
GCAGGGACTAAAACCAAAAC+TGG + chr7_3:67948289-67948308 Msa1119100:intron 45.0%
GCAGGGACTAAAACCAAAAC+TGG + chr7_3:67948289-67948308 Msa1119100:intron 45.0%
! CCTGCAAAATAGGCCAGTTT+TGG - chr7_3:67948365-67948384 None:intergenic 45.0%
!! CCAAAACTGGCCTATTTTGC+AGG + chr7_3:67948362-67948381 Msa1119100:intron 45.0%
!! GGTATTGGTCCCTGCAAAAT+AGG - chr7_3:67948375-67948394 None:intergenic 45.0%
CATGCAGAATAGGCTGCTTA+AGG - chr7_3:67948473-67948492 None:intergenic 45.0%
CAAGAGTTTCCCATTCCCAA+TGG - chr7_3:67948715-67948734 None:intergenic 45.0%
CATTGGGAATGGGAAACTCT+TGG + chr7_3:67948713-67948732 Msa1119100:intron 45.0%
ACAGCTAGGCCATGCATTTA+AGG - chr7_3:67948840-67948859 None:intergenic 45.0%
TGTGTGTTCTTCACTCTCCT+TGG - chr7_3:67949114-67949133 None:intergenic 45.0%
!! ATGGTGATTGGTGATGAAGG+TGG + chr7_3:67949317-67949336 Msa1119100:three_prime_UTR 45.0%
AAGGTGGTAAAAGTTCGAGC+AGG + chr7_3:67949333-67949352 Msa1119100:three_prime_UTR 45.0%
AAATCCTACCTCCTCCATGT+TGG - chr7_3:67949461-67949480 None:intergenic 45.0%
AACATGGAGGAGGTAGGATT+TGG + chr7_3:67949460-67949479 Msa1119100:three_prime_UTR 45.0%
ACATGGAGGAGGTAGGATTT+GGG + chr7_3:67949461-67949480 Msa1119100:three_prime_UTR 45.0%
!! AAATAAATAAGATTATAATT+TGG - chr7_3:67947014-67947033 None:intergenic 5.0%
!!! AAATTTTTTTTTATAGTTTT+TGG + chr7_3:67947922-67947941 Msa1119100:intron 5.0%
!!! AATTTTTTTTTTATAGTTTT+TGG + chr7_3:67947985-67948004 Msa1119100:intron 5.0%
!! AAAATTATCAATTAATTAAA+AGG + chr7_3:67948613-67948632 Msa1119100:intron 5.0%
!! AAATTATCAATTAATTAAAA+GGG + chr7_3:67948614-67948633 Msa1119100:intron 5.0%
!! TGGTGGTGAAGCTGCGATTT+TGG - chr7_3:67940872-67940891 None:intergenic 50.0%
CTCTAAGTGGAGGACAACCA+GGG - chr7_3:67940942-67940961 None:intergenic 50.0%
!!! GGGACCTCCTTGTTTTTCAC+GGG - chr7_3:67941075-67941094 None:intergenic 50.0%
GAGGTCCCAAGGTAGTAGAT+AGG + chr7_3:67941087-67941106 Msa1119100:CDS 50.0%
GTCCCAAGGTAGTAGATAGG+TGG + chr7_3:67941090-67941109 Msa1119100:CDS 50.0%
CCCCACCTATCTACTACCTT+GGG - chr7_3:67941095-67941114 None:intergenic 50.0%
CCCAAGGTAGTAGATAGGTG+GGG + chr7_3:67941092-67941111 Msa1119100:CDS 50.0%
ACCCCACCTATCTACTACCT+TGG - chr7_3:67941096-67941115 None:intergenic 50.0%
TGGACAGGTAAGCTACTTGG+CGG + chr7_3:67941549-67941568 Msa1119100:intron 50.0%
!! GGCGGTTTTATACTTGGCTC+TGG + chr7_3:67941567-67941586 Msa1119100:intron 50.0%
GCTAGAGAAACTCCAGTGAC+AGG - chr7_3:67941681-67941700 None:intergenic 50.0%
GCGTAGGCAAAGGATTTGAG+AGG + chr7_3:67942208-67942227 Msa1119100:intron 50.0%
GAGGAGAGAATTGGGTAGGA+AGG + chr7_3:67942227-67942246 Msa1119100:intron 50.0%
GGATTGTGTTTGCGACATGG+TGG + chr7_3:67943203-67943222 Msa1119100:intron 50.0%
TTGTGTTTGCGACATGGTGG+AGG + chr7_3:67943206-67943225 Msa1119100:intron 50.0%
TAAGCTCCGCAATTGCACGT+AGG - chr7_3:67943288-67943307 None:intergenic 50.0%
AGGGATCAGGTCCATTACGA+GGG - chr7_3:67943482-67943501 None:intergenic 50.0%
TAGGGATCAGGTCCATTACG+AGG - chr7_3:67943483-67943502 None:intergenic 50.0%
GAAGTTCCTGATTCAGCGAC+AGG + chr7_3:67943985-67944004 Msa1119100:CDS 50.0%
GAAGATCCTGTCGCTGAATC+AGG - chr7_3:67943994-67944013 None:intergenic 50.0%
GGGTTCATGGCTCACAGATT+TGG - chr7_3:67944862-67944881 None:intergenic 50.0%
TGCTGGCACCAATAACCATC+AGG + chr7_3:67945089-67945108 Msa1119100:CDS 50.0%
CTGCAAGTCCAGATTGAGAG+TGG - chr7_3:67945368-67945387 None:intergenic 50.0%
!! ACCAATTAAAGCACTGGCCG+AGG + chr7_3:67946168-67946187 Msa1119100:CDS 50.0%
TCCTCGGCCAGTGCTTTAAT+TGG - chr7_3:67946172-67946191 None:intergenic 50.0%
CAGGTACCCCCCAAAAGTTA+TGG + chr7_3:67946257-67946276 Msa1119100:intron 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr7_3:67946540-67946559 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr7_3:67946537-67946556 Msa1119100:intron 50.0%
AAATATGCCAGATGCCGACC+CGG - chr7_3:67946565-67946584 None:intergenic 50.0%
AAGCTACCACAGGTAGCTCA+GGG - chr7_3:67946851-67946870 None:intergenic 50.0%
CTACCTGTGGTAGCTTCATG+TGG + chr7_3:67946855-67946874 Msa1119100:CDS 50.0%
TCACCACATGAAGCTACCAC+AGG - chr7_3:67946861-67946880 None:intergenic 50.0%
!! GTGGTGGACATGGCAAAACT+CGG - chr7_3:67947179-67947198 None:intergenic 50.0%
CAGCAGTAGTTAACTACCGC+TGG - chr7_3:67947683-67947702 None:intergenic 50.0%
CAGCGGTAGTTAACTACTGC+TGG + chr7_3:67947681-67947700 Msa1119100:intron 50.0%
GCGGTAGTTAACTACTGCTG+GGG + chr7_3:67947683-67947702 Msa1119100:intron 50.0%
CGGTAGTTAACTACTGCTGG+GGG + chr7_3:67947684-67947703 Msa1119100:intron 50.0%
ATGACAGTCATTGGAGACCC+AGG - chr7_3:67947784-67947803 None:intergenic 50.0%
CATCACATAACTGGGGTCAG+GGG + chr7_3:67948213-67948232 Msa1119100:intron 50.0%
AGGGGCTGCAATAGATCCAT+TGG + chr7_3:67948696-67948715 Msa1119100:intron 50.0%
GGGGCTGCAATAGATCCATT+GGG + chr7_3:67948697-67948716 Msa1119100:intron 50.0%
TGGGAATGGGAAACTCTTGG+TGG + chr7_3:67948716-67948735 Msa1119100:intron 50.0%
CTCAGATACACCCAAAGGAG+CGG + chr7_3:67948953-67948972 Msa1119100:intron 50.0%
AAGACGGCGTCAAGAGACAA+AGG + chr7_3:67949161-67949180 Msa1119100:CDS 50.0%
GTTAACCTCCAACATGGAGG+AGG + chr7_3:67949450-67949469 Msa1119100:three_prime_UTR 50.0%
GGTAGGATTTGGGCATCTGT+TGG + chr7_3:67949471-67949490 Msa1119100:three_prime_UTR 50.0%
!! TTTGGGCATCTGTTGGCTTG+TGG + chr7_3:67949478-67949497 Msa1119100:three_prime_UTR 50.0%
AGCTTCACCACCACCGTAGT+TGG + chr7_3:67940879-67940898 Msa1119100:five_prime_UTR 55.0%
GCTTCACCACCACCGTAGTT+GGG + chr7_3:67940880-67940899 Msa1119100:five_prime_UTR 55.0%
TTGCAGCAACCCAACTACGG+TGG - chr7_3:67940892-67940911 None:intergenic 55.0%
CACTCTACAGTGGTAGCTCG+AGG - chr7_3:67940919-67940938 None:intergenic 55.0%
! ACAACCAGGGCACTCTACAG+TGG - chr7_3:67940929-67940948 None:intergenic 55.0%
! GCTCTAAGTGGAGGACAACC+AGG - chr7_3:67940943-67940962 None:intergenic 55.0%
GGGGCGAAACAGTTGAACGT+CGG + chr7_3:67941350-67941369 Msa1119100:intron 55.0%
!!! GAGGTTTTGAGCCCTGTCAC+TGG + chr7_3:67941666-67941685 Msa1119100:CDS 55.0%
TGGCGGAGGAACCATGATGA+AGG - chr7_3:67942571-67942590 None:intergenic 55.0%
! TGCATATGACAGGGGGCACA+TGG - chr7_3:67943613-67943632 None:intergenic 55.0%
! GCACTGGCCGAGGATATAGA+TGG + chr7_3:67946178-67946197 Msa1119100:CDS 55.0%
AGGGAATGGGTCTGGTGACA+TGG + chr7_3:67946216-67946235 Msa1119100:CDS 55.0%
TGGCGAGGGTAGTTTGGATC+TGG + chr7_3:67946478-67946497 Msa1119100:intron 55.0%
CTTATCCCACTAAGTGGGGC+CGG + chr7_3:67946543-67946562 Msa1119100:intron 55.0%
TTATCCCACTAAGTGGGGCC+GGG + chr7_3:67946544-67946563 Msa1119100:intron 55.0%
! TAGCTCAGGGTGCCTGACAA+TGG - chr7_3:67946838-67946857 None:intergenic 55.0%
GAAGCTACCACAGGTAGCTC+AGG - chr7_3:67946852-67946871 None:intergenic 55.0%
GGTAGCGAATCCGCTCCTTT+GGG - chr7_3:67948966-67948985 None:intergenic 55.0%
! TGGTAGCGAATCCGCTCCTT+TGG - chr7_3:67948967-67948986 None:intergenic 55.0%
! AGCGGATTCGCTACCAAGCA+AGG + chr7_3:67948971-67948990 Msa1119100:CDS 55.0%
ACCTCCAACATGGAGGAGGT+AGG + chr7_3:67949454-67949473 Msa1119100:three_prime_UTR 55.0%
TCCTACCTCCTCCATGTTGG+AGG - chr7_3:67949458-67949477 None:intergenic 55.0%
CAGCAACCCAACTACGGTGG+TGG - chr7_3:67940889-67940908 None:intergenic 60.0%
! GCTACCACTGTAGAGTGCCC+TGG + chr7_3:67940922-67940941 Msa1119100:CDS 60.0%
CGGCCCCACTTAGTGGGATA+AGG - chr7_3:67946545-67946564 None:intergenic 60.0%
CAGGCACCCTGAGCTACCTG+TGG + chr7_3:67946842-67946861 Msa1119100:CDS 65.0%
CCGACCCGGCCCCACTTAGT+GGG - chr7_3:67946551-67946570 None:intergenic 70.0%
CCCACTAAGTGGGGCCGGGT+CGG + chr7_3:67946548-67946567 Msa1119100:intron 70.0%
GCCGACCCGGCCCCACTTAG+TGG - chr7_3:67946552-67946571 None:intergenic 75.0%
AGTGGGGCCGGGTCGGCATC+TGG + chr7_3:67946555-67946574 Msa1119100:intron 75.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 67940851 67949740 67940851 ID=Msa1119100;Name=Msa1119100
chr7_3 mRNA 67940851 67949740 67940851 ID=Msa1119100-mRNA-1;Parent=Msa1119100;Name=Msa1119100-mRNA-1;_AED=0.08;_eAED=0.08;_QI=62|0.90|0.91|1|1|1|12|490|478
chr7_3 exon 67940851 67940994 67940851 ID=Msa1119100-mRNA-1:exon:16817;Parent=Msa1119100-mRNA-1
chr7_3 exon 67941063 67941175 67941063 ID=Msa1119100-mRNA-1:exon:16818;Parent=Msa1119100-mRNA-1
chr7_3 exon 67941526 67941555 67941526 ID=Msa1119100-mRNA-1:exon:16819;Parent=Msa1119100-mRNA-1
chr7_3 exon 67941663 67941799 67941663 ID=Msa1119100-mRNA-1:exon:16820;Parent=Msa1119100-mRNA-1
chr7_3 exon 67943930 67944109 67943930 ID=Msa1119100-mRNA-1:exon:16821;Parent=Msa1119100-mRNA-1
chr7_3 exon 67944803 67944866 67944803 ID=Msa1119100-mRNA-1:exon:16822;Parent=Msa1119100-mRNA-1
chr7_3 exon 67945003 67945110 67945003 ID=Msa1119100-mRNA-1:exon:16823;Parent=Msa1119100-mRNA-1
chr7_3 exon 67946106 67946259 67946106 ID=Msa1119100-mRNA-1:exon:16824;Parent=Msa1119100-mRNA-1
chr7_3 exon 67946787 67946876 67946787 ID=Msa1119100-mRNA-1:exon:16825;Parent=Msa1119100-mRNA-1
chr7_3 exon 67947228 67947355 67947228 ID=Msa1119100-mRNA-1:exon:16826;Parent=Msa1119100-mRNA-1
chr7_3 exon 67948465 67948522 67948465 ID=Msa1119100-mRNA-1:exon:16827;Parent=Msa1119100-mRNA-1
chr7_3 exon 67948958 67949740 67948958 ID=Msa1119100-mRNA-1:exon:16828;Parent=Msa1119100-mRNA-1
chr7_3 five_prime_UTR 67940851 67940912 67940851 ID=Msa1119100-mRNA-1:five_prime_utr;Parent=Msa1119100-mRNA-1
chr7_3 CDS 67940913 67940994 67940913 ID=Msa1119100-mRNA-1:cds;Parent=Msa1119100-mRNA-1
chr7_3 CDS 67941063 67941175 67941063 ID=Msa1119100-mRNA-1:cds;Parent=Msa1119100-mRNA-1
chr7_3 CDS 67941526 67941555 67941526 ID=Msa1119100-mRNA-1:cds;Parent=Msa1119100-mRNA-1
chr7_3 CDS 67941663 67941799 67941663 ID=Msa1119100-mRNA-1:cds;Parent=Msa1119100-mRNA-1
chr7_3 CDS 67943930 67944109 67943930 ID=Msa1119100-mRNA-1:cds;Parent=Msa1119100-mRNA-1
chr7_3 CDS 67944803 67944866 67944803 ID=Msa1119100-mRNA-1:cds;Parent=Msa1119100-mRNA-1
chr7_3 CDS 67945003 67945110 67945003 ID=Msa1119100-mRNA-1:cds;Parent=Msa1119100-mRNA-1
chr7_3 CDS 67946106 67946259 67946106 ID=Msa1119100-mRNA-1:cds;Parent=Msa1119100-mRNA-1
chr7_3 CDS 67946787 67946876 67946787 ID=Msa1119100-mRNA-1:cds;Parent=Msa1119100-mRNA-1
chr7_3 CDS 67947228 67947355 67947228 ID=Msa1119100-mRNA-1:cds;Parent=Msa1119100-mRNA-1
chr7_3 CDS 67948465 67948522 67948465 ID=Msa1119100-mRNA-1:cds;Parent=Msa1119100-mRNA-1
chr7_3 CDS 67948958 67949250 67948958 ID=Msa1119100-mRNA-1:cds;Parent=Msa1119100-mRNA-1
chr7_3 three_prime_UTR 67949251 67949740 67949251 ID=Msa1119100-mRNA-1:three_prime_utr;Parent=Msa1119100-mRNA-1
Gene Sequence

>Msa1119100

ATGCCTCGAGCTACCACTGTAGAGTGCCCTGGTTGTCCTCCACTTAGAGCTTTAACCTTGGACACACTTGGTCTTATCAAAGTTATCGAATCCCGTGAAAAACAAGGAGGTCCCAAGGTAGTAGATAGGTGGGGTGAACCCGATTCAACTAAGTCCGTTAACGCTGTTTCACTCATTGATCGCAAATCCAACCCGTTATTAGCTGTGGCAAGAAAAAATGGACAGATTGAGGTTTTGAGCCCTGTCACTGGAGTTTCTCTAGCTACAATATCAAATGCCAATGATTTAGATCTTCAGTCTGAAGAGAATAATGTTATTGGTTTGCATCTATTTGCAAACCAGAATCTTGAGTTTGAATCCAGGGCTTATAATTTACTTACATGTACGGGCAAAGGGAATGCAAGCATAAGGTCCCTTGAAGTTCCTGATTCAGCGACAGGATCTTCCAGCATCGATTCTTCAAAAACCTGGAATGTTTGTAATAGTGGTAACGTCTTGTGTTGCAAGGTGGACAAAAATGAGAAGTTTGCTTTATTTGGAGGGAAAGGCGTTGAAGTTAATATTTGGGATCTTGATAACTGCACGAAGATCTGGAATGCCAAATCTCCTCCTAAAAATAGCCTTGATATATTCACACCTACCTGGTTCACATCTGTTTCATATCTAAGTAAAGATGACCATCGAAAATTTGTTGCTGGCACCAATAACCATCAGGTTCGCCTTTATGACATATCTGCTCAGAGGAGACCTGTTCTCTCTATTGATTTTCGTGAGACACCAATTAAAGCACTGGCCGAGGATATAGATGGCAACACAATCTATCTAGGGAATGGGTCTGGTGACATGGCTTCTGTTGATATACGTACAGGTAAAATGCTAGGATGTTTTACGGGAAAATGCTCTGGAAGCATCAGATCCATTGTCAGGCACCCTGAGCTACCTGTGGTAGCTTCATGTGGACTGGATGGCTATTTACGACTTTGGGATACAAAGACAAGGCAGCTTCTTTCATCTGTAGGTTTCATATCCTTTTTCTTTGTCCTTTTCAGAATTGCTATTGCTATAGAGTTCATCTTGTTGCGATCTGTTTTCCTTAAGCAGCCTATTCTGCATGTTCTTTTTGATTCCAATTTCATTGTTGAAGATACACCCAAAGGAGCGGATTCGCTACCAAGCAAGGAAGAAACTATGAAAGAGATCACGGATGGGGAAGAAATTGAAGCAACACCTTTGAAAAGAAAAAAGTCATCTAGAAATAAAGAAAATATGATAGATGGTAGTAAAAAAAAGAAAAGAGCCAAGGAGAGTGAAGAACACACAAAATCCAAAGGAAATGATGAACATGAGAAGACGGCGTCAAGAGACAAAGGAAGCAAGTCAACATCAAAGAAAAAAAACAAGAGCTCAAAATATGAAATTCCAGATGAAGGGTTGTGA

Protein sequence

>Msa1119100

MPRATTVECPGCPPLRALTLDTLGLIKVIESREKQGGPKVVDRWGEPDSTKSVNAVSLIDRKSNPLLAVARKNGQIEVLSPVTGVSLATISNANDLDLQSEENNVIGLHLFANQNLEFESRAYNLLTCTGKGNASIRSLEVPDSATGSSSIDSSKTWNVCNSGNVLCCKVDKNEKFALFGGKGVEVNIWDLDNCTKIWNAKSPPKNSLDIFTPTWFTSVSYLSKDDHRKFVAGTNNHQVRLYDISAQRRPVLSIDFRETPIKALAEDIDGNTIYLGNGSGDMASVDIRTGKMLGCFTGKCSGSIRSIVRHPELPVVASCGLDGYLRLWDTKTRQLLSSVGFISFFFVLFRIAIAIEFILLRSVFLKQPILHVLFDSNFIVEDTPKGADSLPSKEETMKEITDGEEIEATPLKRKKSSRNKENMIDGSKKKKRAKESEEHTKSKGNDEHEKTASRDKGSKSTSKKKNKSSKYEIPDEGL*