AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0387130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0387130 MtrunA17_Chr3g0140001 85.654 474 32 2 1 474 1 438 0.0 792
Msa0387130 MtrunA17_Chr3g0140951 38.966 503 206 12 1 468 1 437 9.89e-107 324
Msa0387130 MtrunA17_Chr7g0263751 31.783 387 194 10 71 448 4 329 4.61e-58 195
Msa0387130 MtrunA17_Chr5g0401811 31.628 215 109 7 182 360 147 359 4.06e-21 96.3
Msa0387130 MtrunA17_Chr4g0053291 27.619 210 120 6 182 360 152 360 4.23e-15 77.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0387130 AT1G27600.2 38.429 471 206 11 1 468 1 390 1.47e-101 310
Msa0387130 AT1G27600.1 38.429 471 206 11 1 468 1 390 1.47e-101 310
Msa0387130 AT2G37090.1 30.809 383 219 6 70 448 3 343 2.56e-63 209
Msa0387130 AT5G67230.1 27.864 323 162 10 182 467 148 436 3.30e-27 114
Msa0387130 AT4G36890.1 26.911 327 162 10 182 467 156 446 2.07e-23 103

Find 169 sgRNAs with CRISPR-Local

Find 228 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCCATACTTGTATTCATTT+GGG 0.210474 3_1:-90997521 Msa0387130:five_prime_UTR
ATTCAGTGATGAATCATATT+TGG 0.212343 3_1:-90996793 Msa0387130:CDS
ATGCCATACTTGTATTCATT+TGG 0.252215 3_1:-90997522 Msa0387130:five_prime_UTR
GACGGTCGGTGCCGCTTCTT+TGG 0.259496 3_1:+90996108 None:intergenic
CTTAACTTAACTTGCTATAT+TGG 0.260473 3_1:-90997637 Msa0387130:five_prime_UTR
CATCGGATGGCATAGACTTC+TGG 0.266735 3_1:+90997210 None:intergenic
GTTACTGAACATTATTGATT+TGG 0.278452 3_1:-90997354 Msa0387130:five_prime_UTR
ACTCTGCTTCGCTGTCATTT+AGG 0.295834 3_1:-90997686 Msa0387130:five_prime_UTR
CTTGTCACAAACTTTGAAAT+TGG 0.298785 3_1:-90996700 Msa0387130:CDS
CATTATTGAGCAAGGAGTTT+CGG 0.309710 3_1:+90997610 None:intergenic
TCAATATTCCACAAAGATCT+TGG 0.315694 3_1:+90997125 None:intergenic
CCTTCAACAGTACGATACTA+TGG 0.319421 3_1:-90996134 Msa0387130:CDS
TTTAAATGAAAATGATGAAT+AGG 0.329672 3_1:+90994758 None:intergenic
TTCATGGTTGGTGTTTCTAT+TGG 0.332880 3_1:-90997044 Msa0387130:CDS
ATTATTGAGCAAGGAGTTTC+GGG 0.342793 3_1:+90997611 None:intergenic
TGTCTACCTGGGACCTCATT+TGG 0.344958 3_1:-90997387 Msa0387130:five_prime_UTR
CTCAAATGGCTACGCCTATT+CGG 0.352822 3_1:-90995047 Msa0387130:three_prime_UTR
CACTTCACTTCCATTACAAA+TGG 0.360558 3_1:+90996227 None:intergenic
CCATATGAAATGAGGGGAAC+TGG 0.366917 3_1:+90997767 None:intergenic
CAAGGAAGATTATAAAGAAT+TGG 0.368822 3_1:-90995109 Msa0387130:three_prime_UTR
CCAGTTCCCCTCATTTCATA+TGG 0.371657 3_1:-90997767 Msa0387130:five_prime_UTR
TTCAGCAAATGAGAGAAATA+AGG 0.372244 3_1:-90996440 Msa0387130:intron
ATCGGATGGCATAGACTTCT+GGG 0.372385 3_1:+90997211 None:intergenic
GGAGATTGAGATTCGGGATT+CGG 0.374596 3_1:+90997789 None:intergenic
GAGTATTAACTAGGAGGTTC+CGG 0.381572 3_1:+90997440 None:intergenic
TTTGGATTTATTTCTATGAA+TGG 0.385928 3_1:-90997336 Msa0387130:exon
ACCCCAAATGAATACAAGTA+TGG 0.387508 3_1:+90997519 None:intergenic
GCAGTTGTGGCTCGAGGAAC+CGG 0.387864 3_1:+90997290 None:intergenic
GAACTGGGAGATTGAGATTC+GGG 0.389150 3_1:+90997783 None:intergenic
AATATGATTCATCACTGAAT+TGG 0.391631 3_1:+90996796 None:intergenic
ATTTCTTGACATGAGATTCA+AGG 0.399068 3_1:+90996992 None:intergenic
AGAACAACCTAGACATCATT+TGG 0.399388 3_1:-90995636 Msa0387130:CDS
GACCGTCTCATGAACCTATC+AGG 0.403510 3_1:-90996092 Msa0387130:CDS
AACATTTGTCCTTTGCGGTC+GGG 0.409180 3_1:-90995932 Msa0387130:CDS
CCATAGTATCGTACTGTTGA+AGG 0.411039 3_1:+90996134 None:intergenic
TTCTCATAAGAAGGCTCCTA+TGG 0.412216 3_1:+90996550 None:intergenic
GTTAGTTTCTAGTTTGTATC+CGG 0.412425 3_1:-90997459 Msa0387130:five_prime_UTR
TTTATTATCATCTTCTCAAA+TGG 0.414672 3_1:-90995061 Msa0387130:three_prime_UTR
CTCTCGAGCAGTCGTTCATT+AGG 0.418918 3_1:+90995722 None:intergenic
GAGGTCCCAGGTAGACAGTT+TGG 0.420025 3_1:+90997393 None:intergenic
TTCTACATACTCTCATGTTA+TGG 0.424636 3_1:-90995904 Msa0387130:CDS
TTTCTCCAAAGCTGACCCTT+AGG 0.431161 3_1:+90997092 None:intergenic
CTTGTATTCATTTGGGGTGA+AGG 0.431827 3_1:-90997514 Msa0387130:five_prime_UTR
ACCTTCTTCATTCACCTCAC+TGG 0.433976 3_1:-90997180 Msa0387130:CDS
CACCAACCAAACTGTCTACC+TGG 0.441773 3_1:-90997399 Msa0387130:five_prime_UTR
ACTGCTCGAGAGTTATGGTT+TGG 0.441983 3_1:-90995711 Msa0387130:CDS
AATCTCATGTCAAGAAATCA+AGG 0.442989 3_1:-90996987 Msa0387130:CDS
CAATATAGCAAGTTAAGTTA+AGG 0.443677 3_1:+90997638 None:intergenic
ACTGATTCGAGCTGCCTGAT+AGG 0.446665 3_1:+90996078 None:intergenic
TGGTCTCCCCTCCTTTGTTG+TGG 0.448208 3_1:-90996680 Msa0387130:CDS
TTGCAAGATTTCTCATAAGA+AGG 0.449145 3_1:+90996541 None:intergenic
TATGTAACATTTGTCCTTTG+CGG 0.449208 3_1:-90995937 Msa0387130:CDS
TTGCAAGGGCCCATTTGTAA+TGG 0.449650 3_1:-90996237 Msa0387130:CDS
AAGTATATGATAGGACCAAC+TGG 0.450935 3_1:+90994879 None:intergenic
CAAAACCTAAGGGTCAGCTT+TGG 0.452259 3_1:-90997097 Msa0387130:CDS
GAACGACTGCTCGAGAGTTA+TGG 0.454061 3_1:-90995716 Msa0387130:CDS
CAATATTCCACAAAGATCTT+GGG 0.454521 3_1:+90997126 None:intergenic
ATGTTATGGCTATCCTCTCC+TGG 0.458004 3_1:-90995890 Msa0387130:intron
TCAGGCAGCTCGAATCAGTC+AGG 0.459366 3_1:-90996074 Msa0387130:CDS
GAGATTCGGGATTCGGTGGT+TGG 0.460957 3_1:+90997796 None:intergenic
AATCAGATGGGAATTCTAAA+CGG 0.469390 3_1:-90996182 Msa0387130:CDS
GGAACTGGGAGATTGAGATT+CGG 0.470696 3_1:+90997782 None:intergenic
ATCAGTCAGGGAAAATTTGT+GGG 0.473922 3_1:-90996061 Msa0387130:CDS
ATCTACATTTCCTGCAGTTG+TGG 0.474203 3_1:+90997277 None:intergenic
AATCAGTCAGGGAAAATTTG+TGG 0.485510 3_1:-90996062 Msa0387130:CDS
TAACATTTGTCCTTTGCGGT+CGG 0.493337 3_1:-90995933 Msa0387130:CDS
CAAGTCACTGTGATGGCGAA+TGG 0.495951 3_1:+90995019 None:intergenic
CATGAGATTCAAGGACAAGT+TGG 0.496224 3_1:+90997001 None:intergenic
GTACCACTTGGTCGCAAAGT+TGG 0.497357 3_1:-90997726 Msa0387130:five_prime_UTR
TTGGATAGTCAAATGTTGCT+TGG 0.502644 3_1:-90997486 Msa0387130:five_prime_UTR
TATTGAGAAATCAAAACCTA+AGG 0.503406 3_1:-90997108 Msa0387130:CDS
ATTGAAACTCATCGCCTCAA+TGG 0.503520 3_1:-90996510 Msa0387130:CDS
TAAGGGTCAGCTTTGGAGAA+AGG 0.503938 3_1:-90997090 Msa0387130:CDS
TAGGAGAGGACTTAGATAAC+GGG 0.506171 3_1:+90997237 None:intergenic
TAAAATGCACTATTAATCAA+TGG 0.509593 3_1:+90994977 None:intergenic
TGTTGAAGATGAAAGTGAAA+TGG 0.510015 3_1:-90995749 Msa0387130:CDS
TGAAATTCTTCATAAAGAAG+CGG 0.510654 3_1:-90995598 Msa0387130:three_prime_UTR
CTATTAATCAATGGACTCGT+AGG 0.511873 3_1:+90994986 None:intergenic
AGATGTTTCAGTTGTCCAGT+TGG 0.512084 3_1:-90994894 Msa0387130:three_prime_UTR
CTTCTATGTTCAGTACCACT+TGG 0.517311 3_1:-90997738 Msa0387130:five_prime_UTR
CACACAAATAATGAATCAGA+TGG 0.517915 3_1:-90996195 Msa0387130:CDS
GTCAGGGAAAATTTGTGGGT+TGG 0.518165 3_1:-90996057 Msa0387130:intron
TGTAATGGAAGTGAAGTGAT+TGG 0.518298 3_1:-90996222 Msa0387130:CDS
AAGTCACTGTGATGGCGAAT+GGG 0.519115 3_1:+90995020 None:intergenic
GAAGATTCCAAATGATGTCT+AGG 0.519367 3_1:+90995629 None:intergenic
ACTTCACTTCCATTACAAAT+GGG 0.520026 3_1:+90996228 None:intergenic
TGAAATAGATGATTGTAAGT+TGG 0.528715 3_1:+90996741 None:intergenic
ACAAGTTGGTTGATGCGAGC+GGG 0.531037 3_1:+90997015 None:intergenic
GTTCCTCGAGCCACAACTGC+AGG 0.532105 3_1:-90997287 Msa0387130:CDS
TTTGCAGGCGATTTGGAACA+TGG 0.535751 3_1:-90996299 Msa0387130:intron
TTGAAAGATCAGAAGGAACC+TGG 0.536645 3_1:+90994922 None:intergenic
GAAATTCTTCATAAAGAAGC+GGG 0.537132 3_1:-90995597 Msa0387130:three_prime_UTR
TGGTTGATGCGAGCGGGATG+AGG 0.537179 3_1:+90997021 None:intergenic
TCCAGTGAGGTGAATGAAGA+AGG 0.541411 3_1:+90997179 None:intergenic
CAGTTTGGTTGGTGAGCTGA+AGG 0.541508 3_1:+90997408 None:intergenic
GGCGAATGGGATATCCGAAT+AGG 0.542334 3_1:+90995033 None:intergenic
CGGTTTCATGCTGAAATGCA+AGG 0.542684 3_1:-90996162 Msa0387130:CDS
GACAGTGCCATATGAAATGA+GGG 0.547217 3_1:+90997760 None:intergenic
TAGAGATCTAATCTAAAAGG+AGG 0.550195 3_1:+90997823 None:intergenic
CATATGAAATGAGGGGAACT+GGG 0.550585 3_1:+90997768 None:intergenic
AACTTCAAAACTAAAATCCT+CGG 0.551880 3_1:+90997847 None:intergenic
GCCATACTTGTATTCATTTG+GGG 0.552780 3_1:-90997520 Msa0387130:five_prime_UTR
AGACAGTGCCATATGAAATG+AGG 0.554099 3_1:+90997759 None:intergenic
AATTAGAAGAACCTTGTCTC+CGG 0.554613 3_1:-90997309 Msa0387130:CDS
TGGATATTCATTATTGAGCA+AGG 0.555310 3_1:+90997602 None:intergenic
CAAAACTAAAATCCTCGGAG+GGG 0.557307 3_1:+90997852 None:intergenic
GTTAAGTTAAGGATGAAAAG+TGG 0.558396 3_1:+90997649 None:intergenic
GATTGAGATTCGGGATTCGG+TGG 0.560924 3_1:+90997792 None:intergenic
CTGCCTCTTGAAAGATCAGA+AGG 0.561868 3_1:+90994915 None:intergenic
GACAAGTTGGTTGATGCGAG+CGG 0.562480 3_1:+90997014 None:intergenic
TCCCAGGTAGACAGTTTGGT+TGG 0.564323 3_1:+90997397 None:intergenic
CAAAATAAACAATTCCATTG+AGG 0.568694 3_1:+90996496 None:intergenic
AAAACTAAAATCCTCGGAGG+GGG 0.570320 3_1:+90997853 None:intergenic
AAGGCTCCTATGGCTTGTGT+TGG 0.570767 3_1:+90996560 None:intergenic
GACTGTTGCAAGATTATCAA+AGG 0.571178 3_1:-90996277 Msa0387130:CDS
AACTTACTTAACTCCAAATG+AGG 0.573417 3_1:+90997374 None:intergenic
TCAAAACTAAAATCCTCGGA+GGG 0.575417 3_1:+90997851 None:intergenic
CAACAATCCACAACAAAGGA+GGG 0.577571 3_1:+90996673 None:intergenic
AGAAGCGGCATTCTCTTGCA+AGG 0.579793 3_1:-90996252 Msa0387130:CDS
GTAGGAGAGGACTTAGATAA+CGG 0.580559 3_1:+90997236 None:intergenic
GGCTCGAGGAACCGGAGACA+AGG 0.587801 3_1:+90997298 None:intergenic
CTTCAACAGTACGATACTAT+GGG 0.589294 3_1:-90996133 Msa0387130:CDS
ATTGAGAAATCAAAACCTAA+GGG 0.590510 3_1:-90997107 Msa0387130:CDS
CAGAAGTCTATGCCATCCGA+TGG 0.591401 3_1:-90997209 Msa0387130:CDS
ACACAAATAATGAATCAGAT+GGG 0.594005 3_1:-90996194 Msa0387130:CDS
TTGTTTCGCTCAACCAGGAG+AGG 0.595868 3_1:+90995877 None:intergenic
TTTCCTGCAGTTGTGGCTCG+AGG 0.597173 3_1:+90997284 None:intergenic
GCATTCTGTTATGCACTGCA+AGG 0.597902 3_1:-90995127 Msa0387130:three_prime_UTR
TGAGACACCGTTAGTTGATG+AGG 0.599843 3_1:-90996901 Msa0387130:CDS
GTTCCTTCTGATCTTTCAAG+AGG 0.600989 3_1:-90994918 Msa0387130:three_prime_UTR
TTAACTCCAAATGAGGTCCC+AGG 0.602794 3_1:+90997381 None:intergenic
TATTAATCAATGGACTCGTA+GGG 0.602849 3_1:+90994987 None:intergenic
AACAATCCACAACAAAGGAG+GGG 0.603273 3_1:+90996674 None:intergenic
CGGATGGCATAGACTTCTGG+GGG 0.604515 3_1:+90997213 None:intergenic
TATGAAGAATTTCACACAAG+GGG 0.607294 3_1:+90995607 None:intergenic
ACAACAATCCACAACAAAGG+AGG 0.607664 3_1:+90996672 None:intergenic
ACAACGAAAGAGTATTAACT+AGG 0.607999 3_1:+90997431 None:intergenic
TGAAGAAGGTAACAATCCAT+CGG 0.609035 3_1:+90997193 None:intergenic
AATCAATGGACTCGTAGGGA+TGG 0.615238 3_1:+90994991 None:intergenic
GAAGGTAACAATCCATCGGA+TGG 0.617846 3_1:+90997197 None:intergenic
GTTCCAACTTTGCGACCAAG+TGG 0.626421 3_1:+90997723 None:intergenic
CAAGAACAAGAACTAACAGA+TGG 0.626873 3_1:-90996843 Msa0387130:CDS
TACTATGGGATCCAAAGAAG+CGG 0.628826 3_1:-90996119 Msa0387130:CDS
GAAGCGGCATTCTCTTGCAA+GGG 0.630624 3_1:-90996251 Msa0387130:CDS
ACCAACCAAACTGTCTACCT+GGG 0.630858 3_1:-90997398 Msa0387130:five_prime_UTR
TTCACAGCCTCATCAACTAA+CGG 0.631940 3_1:+90996894 None:intergenic
TGATAGGTTCATGAGACGGT+CGG 0.632869 3_1:+90996094 None:intergenic
TTCAAAACTAAAATCCTCGG+AGG 0.635767 3_1:+90997850 None:intergenic
GGTATCGCAAGTCACTGTGA+TGG 0.642085 3_1:+90995012 None:intergenic
ATGACAGCGAAGCAGAGTGG+AGG 0.642192 3_1:+90997691 None:intergenic
TCGGATGGCATAGACTTCTG+GGG 0.645263 3_1:+90997212 None:intergenic
AGATTATCAAAGGATAGAAG+CGG 0.648323 3_1:-90996267 Msa0387130:CDS
ATGGAAGTGAAGTGATTGGA+TGG 0.650614 3_1:-90996218 Msa0387130:CDS
AGAACATCACCCGACCGCAA+AGG 0.650955 3_1:+90995923 None:intergenic
CAGGCAGCTCGAATCAGTCA+GGG 0.651988 3_1:-90996073 Msa0387130:CDS
TGGCATGAATGTAAACAAAG+TGG 0.652503 3_1:+90997539 None:intergenic
TGCCTGATAGGTTCATGAGA+CGG 0.656114 3_1:+90996090 None:intergenic
ACGAAAGAGTATTAACTAGG+AGG 0.661681 3_1:+90997434 None:intergenic
TTATGAAGAATTTCACACAA+GGG 0.661763 3_1:+90995606 None:intergenic
TCAACAACAATCCACAACAA+AGG 0.663654 3_1:+90996669 None:intergenic
TGAAGATGAAAGTGAAATGG+AGG 0.667770 3_1:-90995746 Msa0387130:CDS
TTTATGAAGAATTTCACACA+AGG 0.675371 3_1:+90995605 None:intergenic
ATCTAACCAACACAAGCCAT+AGG 0.684632 3_1:-90996566 Msa0387130:CDS
TAAATGACAGCGAAGCAGAG+TGG 0.687573 3_1:+90997688 None:intergenic
AAAAGCACTGGAGTCCAGTG+AGG 0.702864 3_1:+90997166 None:intergenic
GAAGATGAAAGTGAAATGGA+GGG 0.738783 3_1:-90995745 Msa0387130:CDS
AGGAGAGGACTTAGATAACG+GGG 0.743514 3_1:+90997238 None:intergenic
ACAGTGCCATATGAAATGAG+GGG 0.766107 3_1:+90997761 None:intergenic
GGATGGCATAGACTTCTGGG+GGG 0.817496 3_1:+90997214 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATCATAGTTAAAATTAAAA+AGG - chr3_1:90997209-90997228 Msa0387130:CDS 10.0%
!! ATCATAGTTAAAATTAAAAA+GGG - chr3_1:90997210-90997229 Msa0387130:CDS 10.0%
!! TATCTTAAAATAACTTAAAA+TGG + chr3_1:90997284-90997303 None:intergenic 10.0%
!! TTTAAATCAAAAGTTAAAAA+AGG + chr3_1:90997410-90997429 None:intergenic 10.0%
!! AATTGAATGTTAAGAATTAT+AGG - chr3_1:90997060-90997079 Msa0387130:CDS 15.0%
!! TTTAAATGAAAATGATGAAT+AGG + chr3_1:90997810-90997829 None:intergenic 15.0%
!!! TTTTAGAGATCTAATCTAAA+AGG + chr3_1:90994748-90994767 None:intergenic 20.0%
!!! TTTGGATTTATTTCTATGAA+TGG - chr3_1:90995229-90995248 Msa0387130:intron 20.0%
!! ACATTCAATTCAATTATAGA+AGG + chr3_1:90997050-90997069 None:intergenic 20.0%
!! ATGTTAAGAATTATAGGTTT+AGG - chr3_1:90997066-90997085 Msa0387130:CDS 20.0%
!! TATGATTAAGAGTTTAGTAT+TGG + chr3_1:90997196-90997215 None:intergenic 20.0%
!! TTTATTATCATCTTCTCAAA+TGG - chr3_1:90997504-90997523 Msa0387130:five_prime_UTR 20.0%
!! TAAAATGCACTATTAATCAA+TGG + chr3_1:90997591-90997610 None:intergenic 20.0%
!!! ACAAACAAAAAGTATATGAT+AGG + chr3_1:90997698-90997717 None:intergenic 20.0%
! AACTTCAAAACTAAAATCCT+CGG + chr3_1:90994721-90994740 None:intergenic 25.0%
! CAATATAGCAAGTTAAGTTA+AGG + chr3_1:90994930-90994949 None:intergenic 25.0%
!!! CTTAACTTAACTTGCTATAT+TGG - chr3_1:90994928-90994947 Msa0387130:three_prime_UTR 25.0%
!! GTTACTGAACATTATTGATT+TGG - chr3_1:90995211-90995230 Msa0387130:intron 25.0%
! TATTGAGAAATCAAAACCTA+AGG - chr3_1:90995457-90995476 Msa0387130:intron 25.0%
! ATTGAGAAATCAAAACCTAA+GGG - chr3_1:90995458-90995477 Msa0387130:intron 25.0%
! CCATGAAACAAATGAAAAAA+TGG + chr3_1:90995508-90995527 None:intergenic 25.0%
!!! CCATTTTTTCATTTGTTTCA+TGG - chr3_1:90995505-90995524 Msa0387130:intron 25.0%
!! TTTTTCATTTGTTTCATGGT+TGG - chr3_1:90995509-90995528 Msa0387130:intron 25.0%
!! AAATCAAGGTTTTTCTTTTG+AGG - chr3_1:90995592-90995611 Msa0387130:three_prime_UTR 25.0%
! AATATGATTCATCACTGAAT+TGG + chr3_1:90995772-90995791 None:intergenic 25.0%
! ATTCAGTGATGAATCATATT+TGG - chr3_1:90995772-90995791 Msa0387130:CDS 25.0%
! TGAAATAGATGATTGTAAGT+TGG + chr3_1:90995827-90995846 None:intergenic 25.0%
! CAAAATAAACAATTCCATTG+AGG + chr3_1:90996072-90996091 None:intergenic 25.0%
! TTAGTTCAAACAATGTTACT+CGG - chr3_1:90996152-90996171 Msa0387130:CDS 25.0%
! ACACAAATAATGAATCAGAT+GGG - chr3_1:90996371-90996390 Msa0387130:intron 25.0%
!! ACTTAGCATATTTTCTTCTT+TGG - chr3_1:90996533-90996552 Msa0387130:CDS 25.0%
! ATTGATCAAAACATCATTTC+AGG + chr3_1:90996741-90996760 None:intergenic 25.0%
!!! TTTATTTTTTCGCTATATGC+AGG - chr3_1:90996771-90996790 Msa0387130:CDS 25.0%
! ATTCCTTCTATCCTAAAAAA+TGG - chr3_1:90996899-90996918 Msa0387130:CDS 25.0%
!!! AATCCATTTTTTAGGATAGA+AGG + chr3_1:90996905-90996924 None:intergenic 25.0%
!!! TTCTCTGTAATCCATTTTTT+AGG + chr3_1:90996913-90996932 None:intergenic 25.0%
! TTATGAAGAATTTCACACAA+GGG + chr3_1:90996962-90996981 None:intergenic 25.0%
! TTTATGAAGAATTTCACACA+AGG + chr3_1:90996963-90996982 None:intergenic 25.0%
! TGAAATTCTTCATAAAGAAG+CGG - chr3_1:90996967-90996986 Msa0387130:CDS 25.0%
! AAGAATTATAGGTTTAGGAA+AGG - chr3_1:90997071-90997090 Msa0387130:CDS 25.0%
! AGAATTATAGGTTTAGGAAA+GGG - chr3_1:90997072-90997091 Msa0387130:CDS 25.0%
!! GTAACTATCGATAACATTTT+TGG + chr3_1:90997134-90997153 None:intergenic 25.0%
!!! TTTAGTATTGGTATATGCAA+AGG + chr3_1:90997184-90997203 None:intergenic 25.0%
! TTACATCTTACAAAACATAC+AGG + chr3_1:90997326-90997345 None:intergenic 25.0%
!! GTTTTGTAAGATGTAAAAGA+AGG - chr3_1:90997330-90997349 Msa0387130:exon 25.0%
! CAAGGAAGATTATAAAGAAT+TGG - chr3_1:90997456-90997475 Msa0387130:five_prime_UTR 25.0%
!!! GGTTTTTAATTATAATGCAC+AGG + chr3_1:90997625-90997644 None:intergenic 25.0%
! GTGCATTATAATTAAAAACC+AGG - chr3_1:90997625-90997644 Msa0387130:five_prime_UTR 25.0%
TAGAGATCTAATCTAAAAGG+AGG + chr3_1:90994745-90994764 None:intergenic 30.0%
GTTAAGTTAAGGATGAAAAG+TGG + chr3_1:90994919-90994938 None:intergenic 30.0%
TGGATATTCATTATTGAGCA+AGG + chr3_1:90994966-90994985 None:intergenic 30.0%
ATGCCATACTTGTATTCATT+TGG - chr3_1:90995043-90995062 Msa0387130:three_prime_UTR 30.0%
TGCCATACTTGTATTCATTT+GGG - chr3_1:90995044-90995063 Msa0387130:three_prime_UTR 30.0%
!! GTTAGTTTCTAGTTTGTATC+CGG - chr3_1:90995106-90995125 Msa0387130:three_prime_UTR 30.0%
!! ACAACGAAAGAGTATTAACT+AGG + chr3_1:90995137-90995156 None:intergenic 30.0%
AACTTACTTAACTCCAAATG+AGG + chr3_1:90995194-90995213 None:intergenic 30.0%
CAATATTCCACAAAGATCTT+GGG + chr3_1:90995442-90995461 None:intergenic 30.0%
TCAATATTCCACAAAGATCT+TGG + chr3_1:90995443-90995462 None:intergenic 30.0%
ATTTCTTGACATGAGATTCA+AGG + chr3_1:90995576-90995595 None:intergenic 30.0%
AATCTCATGTCAAGAAATCA+AGG - chr3_1:90995578-90995597 Msa0387130:three_prime_UTR 30.0%
!! CTTGTCACAAACTTTGAAAT+TGG - chr3_1:90995865-90995884 Msa0387130:intron 30.0%
TTGCAAGATTTCTCATAAGA+AGG + chr3_1:90996027-90996046 None:intergenic 30.0%
TTCAGCAAATGAGAGAAATA+AGG - chr3_1:90996125-90996144 Msa0387130:CDS 30.0%
!! CTTTCCTTCAATATTTTTGC+AGG - chr3_1:90996251-90996270 Msa0387130:CDS 30.0%
AGATTATCAAAGGATAGAAG+CGG - chr3_1:90996298-90996317 Msa0387130:intron 30.0%
ACTTCACTTCCATTACAAAT+GGG + chr3_1:90996340-90996359 None:intergenic 30.0%
CACACAAATAATGAATCAGA+TGG - chr3_1:90996370-90996389 Msa0387130:intron 30.0%
AATCAGATGGGAATTCTAAA+CGG - chr3_1:90996383-90996402 Msa0387130:intron 30.0%
TATGTAACATTTGTCCTTTG+CGG - chr3_1:90996628-90996647 Msa0387130:CDS 30.0%
TTCTACATACTCTCATGTTA+TGG - chr3_1:90996661-90996680 Msa0387130:CDS 30.0%
TGTTGAAGATGAAAGTGAAA+TGG - chr3_1:90996816-90996835 Msa0387130:CDS 30.0%
TATGAAGAATTTCACACAAG+GGG + chr3_1:90996961-90996980 None:intergenic 30.0%
GAAATTCTTCATAAAGAAGC+GGG - chr3_1:90996968-90996987 Msa0387130:CDS 30.0%
TTAAAAAGGGAAAAGTAGAC+AGG - chr3_1:90997223-90997242 Msa0387130:CDS 30.0%
TTGTAAGATGTAAAAGAAGG+AGG - chr3_1:90997333-90997352 Msa0387130:exon 30.0%
! TATTAATCAATGGACTCGTA+GGG + chr3_1:90997581-90997600 None:intergenic 30.0%
TCAAAACTAAAATCCTCGGA+GGG + chr3_1:90994717-90994736 None:intergenic 35.0%
TTCAAAACTAAAATCCTCGG+AGG + chr3_1:90994718-90994737 None:intergenic 35.0%
ATTATTGAGCAAGGAGTTTC+GGG + chr3_1:90994957-90994976 None:intergenic 35.0%
CATTATTGAGCAAGGAGTTT+CGG + chr3_1:90994958-90994977 None:intergenic 35.0%
!!! GAATATCCACTTGCCATTTT+TGG - chr3_1:90994977-90994996 Msa0387130:three_prime_UTR 35.0%
TGGCATGAATGTAAACAAAG+TGG + chr3_1:90995029-90995048 None:intergenic 35.0%
GCCATACTTGTATTCATTTG+GGG - chr3_1:90995045-90995064 Msa0387130:three_prime_UTR 35.0%
ACCCCAAATGAATACAAGTA+TGG + chr3_1:90995049-90995068 None:intergenic 35.0%
!!! ATTTGGGGTGAAGGTTTTTT+TGG - chr3_1:90995060-90995079 Msa0387130:three_prime_UTR 35.0%
TTGGATAGTCAAATGTTGCT+TGG - chr3_1:90995079-90995098 Msa0387130:three_prime_UTR 35.0%
!! ACGAAAGAGTATTAACTAGG+AGG + chr3_1:90995134-90995153 None:intergenic 35.0%
AATTAGAAGAACCTTGTCTC+CGG - chr3_1:90995256-90995275 Msa0387130:intron 35.0%
TGAAGAAGGTAACAATCCAT+CGG + chr3_1:90995375-90995394 None:intergenic 35.0%
! TTTTCTTCCCAAGATCTTTG+TGG - chr3_1:90995432-90995451 Msa0387130:intron 35.0%
! TTCATGGTTGGTGTTTCTAT+TGG - chr3_1:90995521-90995540 Msa0387130:intron 35.0%
CAAGAACAAGAACTAACAGA+TGG - chr3_1:90995722-90995741 Msa0387130:CDS 35.0%
TCAACAACAATCCACAACAA+AGG + chr3_1:90995899-90995918 None:intergenic 35.0%
!! CTGACATTTTGAGAAGTAGT+GGG - chr3_1:90995945-90995964 Msa0387130:CDS 35.0%
ATCGCCTGCAAAAATATTGA+AGG + chr3_1:90996258-90996277 None:intergenic 35.0%
!! CAATATTTTTGCAGGCGATT+TGG - chr3_1:90996259-90996278 Msa0387130:CDS 35.0%
GACTGTTGCAAGATTATCAA+AGG - chr3_1:90996288-90996307 Msa0387130:CDS 35.0%
CACTTCACTTCCATTACAAA+TGG + chr3_1:90996341-90996360 None:intergenic 35.0%
! TGTAATGGAAGTGAAGTGAT+TGG - chr3_1:90996343-90996362 Msa0387130:intron 35.0%
CTTCAACAGTACGATACTAT+GGG - chr3_1:90996432-90996451 Msa0387130:intron 35.0%
AATCAGTCAGGGAAAATTTG+TGG - chr3_1:90996503-90996522 Msa0387130:CDS 35.0%
ATCAGTCAGGGAAAATTTGT+GGG - chr3_1:90996504-90996523 Msa0387130:CDS 35.0%
TCAACTGAACCTGTTGAAAT+TGG - chr3_1:90996575-90996594 Msa0387130:CDS 35.0%
!! TATTTTTGTTTCGCTCAACC+AGG + chr3_1:90996696-90996715 None:intergenic 35.0%
TGAAGATGAAAGTGAAATGG+AGG - chr3_1:90996819-90996838 Msa0387130:CDS 35.0%
GAAGATGAAAGTGAAATGGA+GGG - chr3_1:90996820-90996839 Msa0387130:CDS 35.0%
AGAACAACCTAGACATCATT+TGG - chr3_1:90996929-90996948 Msa0387130:CDS 35.0%
GAAGATTCCAAATGATGTCT+AGG + chr3_1:90996939-90996958 None:intergenic 35.0%
!!! CTGAAGTTTTAACTCACAAC+AGG + chr3_1:90997011-90997030 None:intergenic 35.0%
! GTATTGGTATATGCAAAGGT+TGG + chr3_1:90997180-90997199 None:intergenic 35.0%
! CTATTAATCAATGGACTCGT+AGG + chr3_1:90997582-90997601 None:intergenic 35.0%
AAGTATATGATAGGACCAAC+TGG + chr3_1:90997689-90997708 None:intergenic 35.0%
AAAACTAAAATCCTCGGAGG+GGG + chr3_1:90994715-90994734 None:intergenic 40.0%
CAAAACTAAAATCCTCGGAG+GGG + chr3_1:90994716-90994735 None:intergenic 40.0%
CATATGAAATGAGGGGAACT+GGG + chr3_1:90994800-90994819 None:intergenic 40.0%
ACAGTGCCATATGAAATGAG+GGG + chr3_1:90994807-90994826 None:intergenic 40.0%
GACAGTGCCATATGAAATGA+GGG + chr3_1:90994808-90994827 None:intergenic 40.0%
AGACAGTGCCATATGAAATG+AGG + chr3_1:90994809-90994828 None:intergenic 40.0%
CTTCTATGTTCAGTACCACT+TGG - chr3_1:90994827-90994846 Msa0387130:three_prime_UTR 40.0%
! CTTGTATTCATTTGGGGTGA+AGG - chr3_1:90995051-90995070 Msa0387130:three_prime_UTR 40.0%
GAGTATTAACTAGGAGGTTC+CGG + chr3_1:90995128-90995147 None:intergenic 40.0%
ATCTACATTTCCTGCAGTTG+TGG + chr3_1:90995291-90995310 None:intergenic 40.0%
TAGGAGAGGACTTAGATAAC+GGG + chr3_1:90995331-90995350 None:intergenic 40.0%
GTAGGAGAGGACTTAGATAA+CGG + chr3_1:90995332-90995351 None:intergenic 40.0%
! AACACCAAGCAAAAAAGCAC+TGG + chr3_1:90995414-90995433 None:intergenic 40.0%
CATGAGATTCAAGGACAAGT+TGG + chr3_1:90995567-90995586 None:intergenic 40.0%
!!! TCTTCACATTTTCGAGTGAC+TGG + chr3_1:90995640-90995659 None:intergenic 40.0%
TTCACAGCCTCATCAACTAA+CGG + chr3_1:90995674-90995693 None:intergenic 40.0%
AACAATCCACAACAAAGGAG+GGG + chr3_1:90995894-90995913 None:intergenic 40.0%
CAACAATCCACAACAAAGGA+GGG + chr3_1:90995895-90995914 None:intergenic 40.0%
ACAACAATCCACAACAAAGG+AGG + chr3_1:90995896-90995915 None:intergenic 40.0%
!! GCTGACATTTTGAGAAGTAG+TGG - chr3_1:90995944-90995963 Msa0387130:CDS 40.0%
ATCTAACCAACACAAGCCAT+AGG - chr3_1:90995999-90996018 Msa0387130:intron 40.0%
TTCTCATAAGAAGGCTCCTA+TGG + chr3_1:90996018-90996037 None:intergenic 40.0%
ATTGAAACTCATCGCCTCAA+TGG - chr3_1:90996055-90996074 Msa0387130:intron 40.0%
TGTTATTCACCTCTCACTCT+TGG - chr3_1:90996187-90996206 Msa0387130:CDS 40.0%
ATGGAAGTGAAGTGATTGGA+TGG - chr3_1:90996347-90996366 Msa0387130:intron 40.0%
CCATAGTATCGTACTGTTGA+AGG + chr3_1:90996434-90996453 None:intergenic 40.0%
CCTTCAACAGTACGATACTA+TGG - chr3_1:90996431-90996450 Msa0387130:intron 40.0%
TACTATGGGATCCAAAGAAG+CGG - chr3_1:90996446-90996465 Msa0387130:CDS 40.0%
TAACATTTGTCCTTTGCGGT+CGG - chr3_1:90996632-90996651 Msa0387130:CDS 40.0%
TAGGTTTAGGAAAGGGAAGA+AGG - chr3_1:90997079-90997098 Msa0387130:CDS 40.0%
GAAGAAGGATCAGAGAAAGA+TGG - chr3_1:90997094-90997113 Msa0387130:CDS 40.0%
TTGAAAGATCAGAAGGAACC+TGG + chr3_1:90997646-90997665 None:intergenic 40.0%
GTTCCTTCTGATCTTTCAAG+AGG - chr3_1:90997647-90997666 Msa0387130:five_prime_UTR 40.0%
AGATGTTTCAGTTGTCCAGT+TGG - chr3_1:90997671-90997690 Msa0387130:five_prime_UTR 40.0%
GGAGATTGAGATTCGGGATT+CGG + chr3_1:90994779-90994798 None:intergenic 45.0%
GAACTGGGAGATTGAGATTC+GGG + chr3_1:90994785-90994804 None:intergenic 45.0%
GGAACTGGGAGATTGAGATT+CGG + chr3_1:90994786-90994805 None:intergenic 45.0%
CCATATGAAATGAGGGGAAC+TGG + chr3_1:90994801-90994820 None:intergenic 45.0%
CCAGTTCCCCTCATTTCATA+TGG - chr3_1:90994798-90994817 Msa0387130:three_prime_UTR 45.0%
TAAATGACAGCGAAGCAGAG+TGG + chr3_1:90994880-90994899 None:intergenic 45.0%
! ACTCTGCTTCGCTGTCATTT+AGG - chr3_1:90994879-90994898 Msa0387130:three_prime_UTR 45.0%
!!! ATCCACTTGCCATTTTTGGC+TGG - chr3_1:90994981-90995000 Msa0387130:three_prime_UTR 45.0%
!!! TCCACTTGCCATTTTTGGCT+GGG - chr3_1:90994982-90995001 Msa0387130:three_prime_UTR 45.0%
TCGTCTTTCCCAGCCAAAAA+TGG + chr3_1:90994993-90995012 None:intergenic 45.0%
ACCAACCAAACTGTCTACCT+GGG - chr3_1:90995167-90995186 Msa0387130:intron 45.0%
TTAACTCCAAATGAGGTCCC+AGG + chr3_1:90995187-90995206 None:intergenic 45.0%
AGGAGAGGACTTAGATAACG+GGG + chr3_1:90995330-90995349 None:intergenic 45.0%
ATCGGATGGCATAGACTTCT+GGG + chr3_1:90995357-90995376 None:intergenic 45.0%
GAAGGTAACAATCCATCGGA+TGG + chr3_1:90995371-90995390 None:intergenic 45.0%
ACCTTCTTCATTCACCTCAC+TGG - chr3_1:90995385-90995404 Msa0387130:intron 45.0%
TCCAGTGAGGTGAATGAAGA+AGG + chr3_1:90995389-90995408 None:intergenic 45.0%
!!! GACTCCAGTGCTTTTTTGCT+TGG - chr3_1:90995407-90995426 Msa0387130:intron 45.0%
CAAAACCTAAGGGTCAGCTT+TGG - chr3_1:90995468-90995487 Msa0387130:intron 45.0%
TTTCTCCAAAGCTGACCCTT+AGG + chr3_1:90995476-90995495 None:intergenic 45.0%
!! TAAGGGTCAGCTTTGGAGAA+AGG - chr3_1:90995475-90995494 Msa0387130:intron 45.0%
! TGAGACACCGTTAGTTGATG+AGG - chr3_1:90995664-90995683 Msa0387130:CDS 45.0%
!! CAAGTTGATCCAAGAGTGAG+AGG + chr3_1:90996199-90996218 None:intergenic 45.0%
! TTTGCAGGCGATTTGGAACA+TGG - chr3_1:90996266-90996285 Msa0387130:CDS 45.0%
TTGCAAGGGCCCATTTGTAA+TGG - chr3_1:90996328-90996347 Msa0387130:intron 45.0%
CGGTTTCATGCTGAAATGCA+AGG - chr3_1:90996403-90996422 Msa0387130:intron 45.0%
TGATAGGTTCATGAGACGGT+CGG + chr3_1:90996474-90996493 None:intergenic 45.0%
TGCCTGATAGGTTCATGAGA+CGG + chr3_1:90996478-90996497 None:intergenic 45.0%
GTCAGGGAAAATTTGTGGGT+TGG - chr3_1:90996508-90996527 Msa0387130:CDS 45.0%
AGCTGCAGACCAATTTCAAC+AGG + chr3_1:90996587-90996606 None:intergenic 45.0%
AACATTTGTCCTTTGCGGTC+GGG - chr3_1:90996633-90996652 Msa0387130:CDS 45.0%
ATGTTATGGCTATCCTCTCC+TGG - chr3_1:90996675-90996694 Msa0387130:CDS 45.0%
ACTGCTCGAGAGTTATGGTT+TGG - chr3_1:90996854-90996873 Msa0387130:CDS 45.0%
GCATTCTGTTATGCACTGCA+AGG - chr3_1:90997438-90997457 Msa0387130:five_prime_UTR 45.0%
CTCAAATGGCTACGCCTATT+CGG - chr3_1:90997518-90997537 Msa0387130:five_prime_UTR 45.0%
! AAGTCACTGTGATGGCGAAT+GGG + chr3_1:90997548-90997567 None:intergenic 45.0%
! AATCAATGGACTCGTAGGGA+TGG + chr3_1:90997577-90997596 None:intergenic 45.0%
CTGCCTCTTGAAAGATCAGA+AGG + chr3_1:90997653-90997672 None:intergenic 45.0%
ATCCTCGGAGGGGGAAAAAA+CGG + chr3_1:90994706-90994725 None:intergenic 50.0%
GATTGAGATTCGGGATTCGG+TGG + chr3_1:90994776-90994795 None:intergenic 50.0%
GTACCACTTGGTCGCAAAGT+TGG - chr3_1:90994839-90994858 Msa0387130:three_prime_UTR 50.0%
GTTCCAACTTTGCGACCAAG+TGG + chr3_1:90994845-90994864 None:intergenic 50.0%
TCCCAGCCAAAAATGGCAAG+TGG + chr3_1:90994986-90995005 None:intergenic 50.0%
!! CAGTTTGGTTGGTGAGCTGA+AGG + chr3_1:90995160-90995179 None:intergenic 50.0%
CACCAACCAAACTGTCTACC+TGG - chr3_1:90995166-90995185 Msa0387130:intron 50.0%
TCCCAGGTAGACAGTTTGGT+TGG + chr3_1:90995171-90995190 None:intergenic 50.0%
TGTCTACCTGGGACCTCATT+TGG - chr3_1:90995178-90995197 Msa0387130:intron 50.0%
TCGGATGGCATAGACTTCTG+GGG + chr3_1:90995356-90995375 None:intergenic 50.0%
CATCGGATGGCATAGACTTC+TGG + chr3_1:90995358-90995377 None:intergenic 50.0%
CAGAAGTCTATGCCATCCGA+TGG - chr3_1:90995356-90995375 Msa0387130:intron 50.0%
!! AAAAGCACTGGAGTCCAGTG+AGG + chr3_1:90995402-90995421 None:intergenic 50.0%
!! ACAAGTTGGTTGATGCGAGC+GGG + chr3_1:90995553-90995572 None:intergenic 50.0%
!! GACAAGTTGGTTGATGCGAG+CGG + chr3_1:90995554-90995573 None:intergenic 50.0%
! AAGGCTCCTATGGCTTGTGT+TGG + chr3_1:90996008-90996027 None:intergenic 50.0%
AGAAGCGGCATTCTCTTGCA+AGG - chr3_1:90996313-90996332 Msa0387130:intron 50.0%
GAAGCGGCATTCTCTTGCAA+GGG - chr3_1:90996314-90996333 Msa0387130:intron 50.0%
GACCGTCTCATGAACCTATC+AGG - chr3_1:90996473-90996492 Msa0387130:CDS 50.0%
!! ACTGATTCGAGCTGCCTGAT+AGG + chr3_1:90996490-90996509 None:intergenic 50.0%
TTGTTTCGCTCAACCAGGAG+AGG + chr3_1:90996691-90996710 None:intergenic 50.0%
CTCTCGAGCAGTCGTTCATT+AGG + chr3_1:90996846-90996865 None:intergenic 50.0%
GAACGACTGCTCGAGAGTTA+TGG - chr3_1:90996849-90996868 Msa0387130:CDS 50.0%
GGCGAATGGGATATCCGAAT+AGG + chr3_1:90997535-90997554 None:intergenic 50.0%
! CAAGTCACTGTGATGGCGAA+TGG + chr3_1:90997549-90997568 None:intergenic 50.0%
GGTATCGCAAGTCACTGTGA+TGG + chr3_1:90997556-90997575 None:intergenic 50.0%
!!! TTCCGTTTTTTCCCCCTCCG+AGG - chr3_1:90994701-90994720 Msa0387130:three_prime_UTR 55.0%
!! GAGATTCGGGATTCGGTGGT+TGG + chr3_1:90994772-90994791 None:intergenic 55.0%
ATGACAGCGAAGCAGAGTGG+AGG + chr3_1:90994877-90994896 None:intergenic 55.0%
GAGGTCCCAGGTAGACAGTT+TGG + chr3_1:90995175-90995194 None:intergenic 55.0%
TTTCCTGCAGTTGTGGCTCG+AGG + chr3_1:90995284-90995303 None:intergenic 55.0%
GGATGGCATAGACTTCTGGG+GGG + chr3_1:90995354-90995373 None:intergenic 55.0%
CGGATGGCATAGACTTCTGG+GGG + chr3_1:90995355-90995374 None:intergenic 55.0%
TGGTCTCCCCTCCTTTGTTG+TGG - chr3_1:90995885-90995904 Msa0387130:intron 55.0%
TCAGGCAGCTCGAATCAGTC+AGG - chr3_1:90996491-90996510 Msa0387130:CDS 55.0%
CAGGCAGCTCGAATCAGTCA+GGG - chr3_1:90996492-90996511 Msa0387130:CDS 55.0%
AGAACATCACCCGACCGCAA+AGG + chr3_1:90996645-90996664 None:intergenic 55.0%
GCAGTTGTGGCTCGAGGAAC+CGG + chr3_1:90995278-90995297 None:intergenic 60.0%
GTTCCTCGAGCCACAACTGC+AGG - chr3_1:90995278-90995297 Msa0387130:intron 60.0%
! AGACTTCTGGGGGGTAGGAG+AGG + chr3_1:90995345-90995364 None:intergenic 60.0%
! GGCATAGACTTCTGGGGGGT+AGG + chr3_1:90995350-90995369 None:intergenic 60.0%
! TGGTTGATGCGAGCGGGATG+AGG + chr3_1:90995547-90995566 None:intergenic 60.0%
GGCTCGAGGAACCGGAGACA+AGG + chr3_1:90995270-90995289 None:intergenic 65.0%
!! GACGGTCGGTGCCGCTTCTT+TGG + chr3_1:90996460-90996479 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 90994681 90997906 90994681 ID=Msa0387130;Name=Msa0387130
chr3_1 mRNA 90994681 90997906 90994681 ID=Msa0387130-mRNA-1;Parent=Msa0387130;Name=Msa0387130-mRNA-1;_AED=0.05;_eAED=0.05;_QI=542|0.6|0.66|1|0.6|0.5|6|512|474
chr3_1 exon 90994681 90995148 90994681 ID=Msa0387130-mRNA-1:exon:25306;Parent=Msa0387130-mRNA-1
chr3_1 exon 90995574 90995794 90995574 ID=Msa0387130-mRNA-1:exon:25305;Parent=Msa0387130-mRNA-1
chr3_1 exon 90995891 90995982 90995891 ID=Msa0387130-mRNA-1:exon:25304;Parent=Msa0387130-mRNA-1
chr3_1 exon 90996058 90996314 90996058 ID=Msa0387130-mRNA-1:exon:25303;Parent=Msa0387130-mRNA-1
chr3_1 exon 90996441 90997562 90996441 ID=Msa0387130-mRNA-1:exon:25302;Parent=Msa0387130-mRNA-1
chr3_1 exon 90997588 90997906 90997588 ID=Msa0387130-mRNA-1:exon:25301;Parent=Msa0387130-mRNA-1
chr3_1 five_prime_UTR 90997588 90997906 90997588 ID=Msa0387130-mRNA-1:five_prime_utr;Parent=Msa0387130-mRNA-1
chr3_1 five_prime_UTR 90997340 90997562 90997340 ID=Msa0387130-mRNA-1:five_prime_utr;Parent=Msa0387130-mRNA-1
chr3_1 CDS 90996441 90997339 90996441 ID=Msa0387130-mRNA-1:cds;Parent=Msa0387130-mRNA-1
chr3_1 CDS 90996058 90996314 90996058 ID=Msa0387130-mRNA-1:cds;Parent=Msa0387130-mRNA-1
chr3_1 CDS 90995891 90995982 90995891 ID=Msa0387130-mRNA-1:cds;Parent=Msa0387130-mRNA-1
chr3_1 CDS 90995618 90995794 90995618 ID=Msa0387130-mRNA-1:cds;Parent=Msa0387130-mRNA-1
chr3_1 three_prime_UTR 90995574 90995617 90995574 ID=Msa0387130-mRNA-1:three_prime_utr;Parent=Msa0387130-mRNA-1
chr3_1 three_prime_UTR 90994681 90995148 90994681 ID=Msa0387130-mRNA-1:three_prime_utr;Parent=Msa0387130-mRNA-1
Gene Sequence

>Msa0387130

ATGGCATCAATTAGAAGAACCTTGTCTCCGGTTCCTCGAGCCACAACTGCAGGAAATGTAGATGTATGTTCAGTATCTTCCCCGTTATCTAAGTCCTCTCCTACCCCCCAGAAGTCTATGCCATCCGATGGATTGTTACCTTCTTCATTCACCTCACTGGACTCCAGTGCTTTTTTGCTTGGTGTTTTCTTCCCAAGATCTTTGTGGAATATTGAGAAATCAAAACCTAAGGGTCAGCTTTGGAGAAAGGTGCTTTTCCATTTTTTCATTTGTTTCATGGTTGGTGTTTCTATTGGCCTCATCCCGCTCGCATCAACCAACTTGTCCTTGAATCTCATGTCAAGAAATCAAGGTTTTTCTTTTGAGGTCATATCTACTGTAAAAAAATTCCAGTCACTCGAAAATGTGAAGATAAATGAGACACCGTTAGTTGATGAGGCTGTGAAGTTTGATGCTACTTTGATTTCTGCAGTACAAGAACAAGAACTAACAGATGGTGTAACGTATAATATATCAGATAGCCAATTCAGTGATGAATCATATTTGGAGTCTCAAAAGCTTCTCATAATTGTCACACCAACTTACAATCATCTATTTCAAGCTTATTATTTGCATCACTTGTCACAAACTTTGAAATTGGTCTCCCCTCCTTTGTTGTGGATTGTTGTTGAGATGAATTCTCAATCTGATGAAACTGCTGACATTTTGAGAAGTAGTGGGATTATGTATAGACATCTCATATGCAAAATGAATCTAACCAACACAAGCCATAGGAGCCTTCTTATGAGAAATCTTGCAATAGCTCACATTGAAACTCATCGCCTCAATGGAATTGTTTATTTTGCAGACAATGATAACATCTATTCGATTGACATCTTTCAGCAAATGAGAGAAATAAGGCGATTTGGAACATGGACTGTTGCAAGATTATCAAAGGATAGAAGCGGCATTCTCTTGCAAGGGCCCATTTGTAATGGAAGTGAAGTGATTGGATGGCACACAAATAATGAATCAGATGGGAATTCTAAACGGTTTCATGCTGAAATGCAAGGCTTCGCCTTCAACAGTACGATACTATGGGATCCAAAGAAGCGGCACCGACCGTCTCATGAACCTATCAGGCAGCTCGAATCAGTCAGGGAAAATTTGTGGGTTGCTGAAATGTATAGAATTTCTGATTATGTAACATTTGTCCTTTGCGGTCGGGTGATGTTCTACATACTCTCATGTTATGGCTATCCTCTCCTGGTTAGCACATTGATTGAGCAGATTGTTGAAGATGAAAGTGAAATGGAGGGCCTAATGAACGACTGCTCGAGAGTTATGGTTTGGAATATTGATCTCGAGTCATCTTATTCCTTCTATCCTAAAAAATGGATTACAGAGAACAACCTAGACATCATTTGGAATCTTCCCCTTGTGTGA
Protein sequence

>Msa0387130

MASIRRTLSPVPRATTAGNVDVCSVSSPLSKSSPTPQKSMPSDGLLPSSFTSLDSSAFLLGVFFPRSLWNIEKSKPKGQLWRKVLFHFFICFMVGVSIGLIPLASTNLSLNLMSRNQGFSFEVISTVKKFQSLENVKINETPLVDEAVKFDATLISAVQEQELTDGVTYNISDSQFSDESYLESQKLLIIVTPTYNHLFQAYYLHHLSQTLKLVSPPLLWIVVEMNSQSDETADILRSSGIMYRHLICKMNLTNTSHRSLLMRNLAIAHIETHRLNGIVYFADNDNIYSIDIFQQMREIRRFGTWTVARLSKDRSGILLQGPICNGSEVIGWHTNNESDGNSKRFHAEMQGFAFNSTILWDPKKRHRPSHEPIRQLESVRENLWVAEMYRISDYVTFVLCGRVMFYILSCYGYPLLVSTLIEQIVEDESEMEGLMNDCSRVMVWNIDLESSYSFYPKKWITENNLDIIWNLPLV*