AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1390210


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1390210 MtrunA17_Chr3g0110271 94.857 1050 20 4 1 1021 47 1091 0.0 2019
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1390210 AT5G37630.1 55.481 1049 416 11 10 1019 15 1051 0.0 1051

Find 216 sgRNAs with CRISPR-Local

Find 609 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTTCAAATTCATCAATTA+TGG 0.088827 tig0021332:-87828 None:intergenic
TCTTGGTCTCTTTGGGCTTT+TGG 0.122377 tig0021332:+84617 Msa1390210:CDS
AGAAGAAGTTAATCTCATTT+TGG 0.147092 tig0021332:+87175 Msa1390210:CDS
GGAAGTTGAAGAGAGGAATT+AGG 0.153892 tig0021332:-78369 None:intergenic
TCATCTTCATTGCTAGTTAA+AGG 0.161903 tig0021332:-84924 None:intergenic
ATGGACTTTCTTTGCTAATT+TGG 0.185978 tig0021332:-83743 None:intergenic
GCTAAGGACTTCATACATTA+AGG 0.212444 tig0021332:+84671 Msa1390210:CDS
CTCCAATCTTTACTTCTTCC+TGG 0.219112 tig0021332:+83949 Msa1390210:CDS
CGCATCTGAGACACCATAAA+AGG 0.234340 tig0021332:-85432 None:intergenic
TCAGTCTCTTTAACGAATAA+TGG 0.234601 tig0021332:-85504 None:intergenic
GTAAGATGTCTTGGTCTCTT+TGG 0.251500 tig0021332:+84609 Msa1390210:CDS
AAGCAGAGGCTGCACTTTAT+TGG 0.256342 tig0021332:+82430 Msa1390210:CDS
ATACACACCCTTTCTCTTAT+TGG 0.258540 tig0021332:+83859 Msa1390210:CDS
TAAGATGTCTTGGTCTCTTT+GGG 0.269846 tig0021332:+84610 Msa1390210:CDS
ATGAGAATGGGAAGTGGATT+TGG 0.280112 tig0021332:-78323 None:intergenic
GAAGAGAGGAATTAGGGATT+TGG 0.290974 tig0021332:-78362 None:intergenic
TATACGTACCAGCAACGATA+TGG 0.291514 tig0021332:-83441 None:intergenic
ACTCGACTTCAACCTGGATT+TGG 0.293852 tig0021332:+87592 Msa1390210:CDS
GAAGTTGAAGAGAGGAATTA+GGG 0.300322 tig0021332:-78368 None:intergenic
ATCGGAGATGGCTTAAGTTT+TGG 0.305023 tig0021332:+83691 Msa1390210:CDS
AGTGTCCATGCGCTTTCTTC+AGG 0.316701 tig0021332:+83900 Msa1390210:CDS
ATCAATTATGGGTGATCTAA+TGG 0.324078 tig0021332:-87816 None:intergenic
TCCACCAAGCATTATATTGA+TGG 0.327640 tig0021332:+82407 Msa1390210:CDS
CATTTGCTTGTGCAAGTCAT+AGG 0.329583 tig0021332:+88030 Msa1390210:three_prime_UTR
TCTTCAAATTCATCAATTAT+GGG 0.332282 tig0021332:-87827 None:intergenic
AGTAGAACATAATGCAGATT+AGG 0.332500 tig0021332:-88173 None:intergenic
ACACCCGTTAATACGGTAAA+AGG 0.340525 tig0021332:+87743 Msa1390210:CDS
AATTTCCTCTTCAAAGCTTA+AGG 0.342166 tig0021332:+80882 Msa1390210:CDS
CTGTGACTCCGTTGGCCATT+TGG 0.349365 tig0021332:+88118 Msa1390210:three_prime_UTR
GAATGCATTTATGCTGTTCT+TGG 0.350176 tig0021332:+84945 Msa1390210:CDS
ATTTCTTGAGATGCTTCCTT+TGG 0.351899 tig0021332:+79523 Msa1390210:CDS
GAGAGAGTTCTTTGAGTTTG+CGG 0.367473 tig0021332:-78291 None:intergenic
TATTGTTTGATTTAGATTGC+AGG 0.372737 tig0021332:+87974 Msa1390210:three_prime_UTR
AGACTCGCTTACTGATTCAT+AGG 0.373887 tig0021332:-81570 None:intergenic
AAAGATTGGAGTAGTTCTTC+AGG 0.374042 tig0021332:-83937 None:intergenic
TCCAATCTTTACTTCTTCCT+GGG 0.374588 tig0021332:+83950 Msa1390210:CDS
AAGTCCTCTCCGAAGAATTA+TGG 0.385568 tig0021332:-81432 None:intergenic
GTAGAACATAATGCAGATTA+GGG 0.387569 tig0021332:-88172 None:intergenic
TTGTCACAGTTTACTTGGCT+TGG 0.387806 tig0021332:-84792 None:intergenic
ATTTCTTGTCACAGTTTACT+TGG 0.401403 tig0021332:-84797 None:intergenic
TGTTTCAAAAGTTCAGCATT+TGG 0.403143 tig0021332:-84648 None:intergenic
TTTCTTTGCTAATTTGGCTA+TGG 0.403794 tig0021332:-83737 None:intergenic
TCTAAATCTAACAGTCTTAT+CGG 0.404427 tig0021332:-78530 None:intergenic
TTAAATTATTGAAAGATGAA+TGG 0.406890 tig0021332:+81489 Msa1390210:CDS
AATGCATTTATGCTGTTCTT+GGG 0.415543 tig0021332:+84946 Msa1390210:CDS
GCCACATTTAATTAGTATAG+AGG 0.422640 tig0021332:+84695 Msa1390210:CDS
GTCAGAGCCCATATCGTTGC+TGG 0.422774 tig0021332:+83433 Msa1390210:CDS
CTAAGGACTTCATACATTAA+GGG 0.428149 tig0021332:+84672 Msa1390210:CDS
CGGCATGCAAAGCGATGGTT+TGG 0.432267 tig0021332:-83535 None:intergenic
GATTCGAACTTCGTCGAAGA+TGG 0.439811 tig0021332:-78251 None:intergenic
TTCTGCTTCGGTACCGGCTG+TGG 0.443284 tig0021332:-83329 None:intergenic
TGCAAAGAAGCCGGTATGCT+TGG 0.444374 tig0021332:-85008 None:intergenic
AGCTCAGGACCATAATTCTT+CGG 0.447432 tig0021332:+81423 Msa1390210:CDS
CGTTTGATGTTATATGCTGC+TGG 0.452246 tig0021332:-81649 None:intergenic
GGCAGACGACATCTTGTTCA+TGG 0.457240 tig0021332:-87795 None:intergenic
GGCTGTACAGCTGGTGTTTG+TGG 0.458710 tig0021332:-87632 None:intergenic
AGAATTGCTGTAAGATGTCT+TGG 0.461269 tig0021332:+84600 Msa1390210:CDS
GTGTCCATGCGCTTTCTTCA+GGG 0.461370 tig0021332:+83901 Msa1390210:CDS
CCCCAGGAAGAAGTAAAGAT+TGG 0.462423 tig0021332:-83951 None:intergenic
GGCCACATTGAACGCATAGC+TGG 0.462649 tig0021332:-85381 None:intergenic
CATATTAATTGTAGGGGAAG+GGG 0.463665 tig0021332:+82377 Msa1390210:intron
AGCTACATATTTAACTAGAC+TGG 0.467357 tig0021332:-87898 None:intergenic
TGCAGCATATACTTCTGCTT+CGG 0.467654 tig0021332:-83341 None:intergenic
TCTGATGCTGCAGCCACAGC+CGG 0.467755 tig0021332:+83316 Msa1390210:CDS
GCTCTCGTTGGCTGTACAGC+TGG 0.470915 tig0021332:-87641 None:intergenic
ATTTATGCTGTTCTTGGGGA+AGG 0.473319 tig0021332:+84951 Msa1390210:CDS
AGCGGAGAAGAAATGAGAAT+GGG 0.474944 tig0021332:-78335 None:intergenic
CCCTCCTCACCACACTCAAA+TGG 0.476517 tig0021332:-85588 None:intergenic
CCATTTGAGTGTGGTGAGGA+GGG 0.476983 tig0021332:+85588 Msa1390210:CDS
TTGTGGATGGCTTACCTCTA+CGG 0.477336 tig0021332:-85628 None:intergenic
TTGTGATTTGTTGAGAGGCA+TGG 0.480160 tig0021332:-85212 None:intergenic
GGTTCCTACACCCGTTAATA+CGG 0.481314 tig0021332:+87736 Msa1390210:CDS
AAGCGGAGAAGAAATGAGAA+TGG 0.482104 tig0021332:-78336 None:intergenic
AAGAAAGTCCATGCGGCTCC+TGG 0.483659 tig0021332:+83754 Msa1390210:CDS
AGATACTTCAAAAGTTCTAA+AGG 0.486715 tig0021332:-81536 None:intergenic
GTAAAAGGCCAATAAGAGAA+AGG 0.487493 tig0021332:-83867 None:intergenic
TCATTATCAACCTCGTGCTC+AGG 0.489397 tig0021332:-83652 None:intergenic
ACGGTCCTCAAGAAGTTGAC+AGG 0.490407 tig0021332:+84751 Msa1390210:CDS
CAACGAGAGCCACACGTTCA+AGG 0.492490 tig0021332:+87654 Msa1390210:CDS
CACCAAGCAAAAGTAGTTGT+CGG 0.493243 tig0021332:-83555 None:intergenic
GCATATTAATTGTAGGGGAA+GGG 0.493939 tig0021332:+82376 Msa1390210:intron
CATTTGAGTGTGGTGAGGAG+GGG 0.497051 tig0021332:+85589 Msa1390210:CDS
AATGTTGTTGTCATCGGAGA+TGG 0.499983 tig0021332:+83679 Msa1390210:CDS
GCATCTGAGACACCATAAAA+GGG 0.500033 tig0021332:-85431 None:intergenic
AGCTGCTAGTGTGTTTCTGC+AGG 0.500053 tig0021332:+83612 Msa1390210:CDS
ATATACTTCTGCTTCGGTAC+CGG 0.502428 tig0021332:-83335 None:intergenic
GTGGCTTTGAAAATGAAGAC+TGG 0.506420 tig0021332:+84895 Msa1390210:CDS
GAGCCACACGTTCAAGGAGA+AGG 0.508606 tig0021332:+87660 Msa1390210:CDS
ATACGTACCAGCAACGATAT+GGG 0.508817 tig0021332:-83440 None:intergenic
ATGGAGGCACTTCTAAAAGC+TGG 0.508905 tig0021332:+81596 Msa1390210:CDS
GTTCCGAGCAGCAGTAAAAG+AGG 0.509289 tig0021332:-78434 None:intergenic
ATGTACTCATCAACTGAAGC+AGG 0.509705 tig0021332:-83403 None:intergenic
CAACAGAAGCATCCAAATCC+AGG 0.510663 tig0021332:-87604 None:intergenic
GGACTTGCTGACCGATCTGC+TGG 0.512669 tig0021332:+81449 Msa1390210:CDS
TCCATTTGAGTGTGGTGAGG+AGG 0.514524 tig0021332:+85587 Msa1390210:CDS
GCTTCCATCAATATAATGCT+TGG 0.516844 tig0021332:-82411 None:intergenic
AATACAGAGGTGTATATTGA+AGG 0.519741 tig0021332:+85350 Msa1390210:intron
GGCTGCAGCATCAGAGCCTA+AGG 0.519780 tig0021332:-83308 None:intergenic
AATTAGGGATTTGGAGAAAG+CGG 0.520104 tig0021332:-78353 None:intergenic
GTCAATTGTCATTAGATGAT+CGG 0.521013 tig0021332:-87126 None:intergenic
ATCATCTAATGACAATTGAC+AGG 0.521352 tig0021332:+87129 Msa1390210:CDS
TACTGATAGATCATTGCTAC+AGG 0.522564 tig0021332:+88192 Msa1390210:three_prime_UTR
GAAGAAGACAGCTGCTGAGA+AGG 0.523042 tig0021332:+86953 Msa1390210:CDS
GTTTCTGCAGCATTAAGCTC+AGG 0.523467 tig0021332:+81408 Msa1390210:intron
ACATATTTAACTAGACTGGT+TGG 0.524348 tig0021332:-87894 None:intergenic
TGTGATTTGTTGAGAGGCAT+GGG 0.525670 tig0021332:-85211 None:intergenic
AACTTGCTCTCAATACCAAA+TGG 0.526173 tig0021332:-88133 None:intergenic
TCGTTACCTCAGATACGATC+TGG 0.528653 tig0021332:-78558 None:intergenic
TTCACGATTTATGTTGCAGA+TGG 0.529130 tig0021332:+85473 Msa1390210:CDS
AGTTATCATTGACTGTACCT+TGG 0.533844 tig0021332:+80811 Msa1390210:CDS
TCGGTGTCTTCCATTGTTAA+CGG 0.533846 tig0021332:-78190 None:intergenic
AGCACAGGGTGCAAAGAAGC+CGG 0.535677 tig0021332:-85017 None:intergenic
CAGCAGCATATAACATCAAA+CGG 0.535759 tig0021332:+81650 Msa1390210:CDS
ATGAGCTTAGATAAAAGCAC+AGG 0.535927 tig0021332:-85032 None:intergenic
TAAAAGGCCAATAAGAGAAA+GGG 0.536708 tig0021332:-83866 None:intergenic
CATTTAATTAGTATAGAGGC+TGG 0.537733 tig0021332:+84699 Msa1390210:CDS
ACTTGAGAGGTTGCGCTGGA+AGG 0.539642 tig0021332:-80791 None:intergenic
CTTGAACGTGTGGCTCTCGT+TGG 0.539958 tig0021332:-87653 None:intergenic
CAAATGGCCAACGGAGTCAC+AGG 0.540398 tig0021332:-88117 None:intergenic
CATAATTGATGAATTTGAAG+AGG 0.541764 tig0021332:+87829 Msa1390210:CDS
GAGCACGAGGTTGATAATGA+AGG 0.544391 tig0021332:+83655 Msa1390210:CDS
AGCTAACGTGGTATATGTAA+TGG 0.545859 tig0021332:+87917 Msa1390210:three_prime_UTR
GCAATACTGTCTATAACTTG+TGG 0.546134 tig0021332:-85558 None:intergenic
ATTTACCTTAAGCTTTGAAG+AGG 0.546545 tig0021332:-80887 None:intergenic
GTGAACTTCTCTGATTCTGA+AGG 0.548776 tig0021332:+84831 Msa1390210:CDS
TCCATCAATATAATGCTTGG+TGG 0.549663 tig0021332:-82408 None:intergenic
GAAGAAATGAGAATGGGAAG+TGG 0.550838 tig0021332:-78329 None:intergenic
GCATCTCAAGAAATAAATCA+AGG 0.551506 tig0021332:-79514 None:intergenic
CCAATCTTTACTTCTTCCTG+GGG 0.552987 tig0021332:+83951 Msa1390210:CDS
CACCATAAAAGGGGAACCCC+CGG 0.553359 tig0021332:-85421 None:intergenic
ACTGGAACTCGACTTCAACC+TGG 0.556588 tig0021332:+87586 Msa1390210:CDS
TGGCTTATAAAGTGCTGTAA+TGG 0.558887 tig0021332:+81509 Msa1390210:CDS
TTGCCTTGTGATTTGTTGAG+AGG 0.559485 tig0021332:-85217 None:intergenic
AGTTGATGAGTACATAGAGT+TGG 0.559832 tig0021332:+83411 Msa1390210:CDS
AATGGGAAGTGGATTTGGAT+CGG 0.560751 tig0021332:-78318 None:intergenic
AAAACCCTGTCAACTTCTTG+AGG 0.561433 tig0021332:-84756 None:intergenic
TTCATCTTCGCCGTTAACAA+TGG 0.562001 tig0021332:+78180 Msa1390210:exon
GAGGAAACTTCTATGTCGTA+TGG 0.562224 tig0021332:+87052 Msa1390210:CDS
CCGATCTGCTGGTGTCTCGA+AGG 0.562367 tig0021332:+81460 Msa1390210:CDS
TACCCTTCTCCTTGAACGTG+TGG 0.562582 tig0021332:-87663 None:intergenic
AGAAGATTCTCAACCTTCTG+TGG 0.566694 tig0021332:+87715 Msa1390210:CDS
ATCAGTAAGCGAGTCTGTCA+TGG 0.566786 tig0021332:+81577 Msa1390210:CDS
GCTATGCGTTCAATGTGGCC+AGG 0.567131 tig0021332:+85384 Msa1390210:CDS
TGTTAAAGAATTGAAACGCA+TGG 0.567785 tig0021332:+87103 Msa1390210:CDS
CACGTTCAAGGAGAAGGGTA+AGG 0.568406 tig0021332:+87666 Msa1390210:CDS
CTGCAAAAGTACGAACCACA+TGG 0.574238 tig0021332:-79445 None:intergenic
GATAACTTGAGAGGTTGCGC+TGG 0.574682 tig0021332:-80795 None:intergenic
TGAACTTCTCTGATTCTGAA+GGG 0.576518 tig0021332:+84832 Msa1390210:CDS
GGTTTAGTAAAGCTAAAGAA+TGG 0.579155 tig0021332:+81617 Msa1390210:CDS
CAGCAACAAGCAGAAAATGA+AGG 0.579306 tig0021332:-78498 None:intergenic
AGCAGTAAAAGAGGAGACGA+AGG 0.579425 tig0021332:-78425 None:intergenic
GAAGGGAATGTTGTTGTCAT+CGG 0.580467 tig0021332:+83673 Msa1390210:CDS
CGCACTACGCCTAGCCGTAG+AGG 0.581973 tig0021332:+85614 Msa1390210:CDS
ACAATTTCTTCAAATTCACC+AGG 0.582307 tig0021332:-83772 None:intergenic
TTATCAACCTCGTGCTCAGG+AGG 0.582847 tig0021332:-83649 None:intergenic
CGGCGGAAGCGAGACGACGT+TGG 0.584349 tig0021332:-78390 None:intergenic
ATTATTACCTGTGACTCCGT+TGG 0.586873 tig0021332:+88110 Msa1390210:three_prime_UTR
GAACTTCTCTGATTCTGAAG+GGG 0.588638 tig0021332:+84833 Msa1390210:CDS
TGAGAGGTTGCGCTGGAAGG+AGG 0.589894 tig0021332:-80788 None:intergenic
TTTGTGCCCCAATAGGCCTT+AGG 0.590310 tig0021332:+83292 Msa1390210:intron
TGATAACTATCCAAGCATAC+CGG 0.590707 tig0021332:+84998 Msa1390210:CDS
TCAGAATCAGAGAAGTTCAC+AGG 0.594318 tig0021332:-84828 None:intergenic
TGCTTGGATAGTTATCACTT+AGG 0.595028 tig0021332:-84992 None:intergenic
TAAATCAAGGATGTCAACGT+TGG 0.595227 tig0021332:-79501 None:intergenic
AGCCACACGTTCAAGGAGAA+GGG 0.595447 tig0021332:+87661 Msa1390210:CDS
CATTATATTGATGGAAGCAG+AGG 0.595714 tig0021332:+82416 Msa1390210:CDS
AGCACGAGGTTGATAATGAA+GGG 0.596117 tig0021332:+83656 Msa1390210:CDS
GCTTCCTTTGGAACAGAATG+CGG 0.596948 tig0021332:+79535 Msa1390210:CDS
TCTGCTGTTCTCTCTCTGCA+AGG 0.598133 tig0021332:-83823 None:intergenic
GAACAGCAGATTATGTGCAG+TGG 0.601142 tig0021332:+83836 Msa1390210:CDS
TAAGGACTTCATACATTAAG+GGG 0.602541 tig0021332:+84673 Msa1390210:CDS
GACGAAGGAAACTACGCGGT+CGG 0.602839 tig0021332:-78410 None:intergenic
CAAATTCACCAGGAGCCGCA+TGG 0.603584 tig0021332:-83762 None:intergenic
AACAGATTCACTCACATCCA+AGG 0.604699 tig0021332:-80828 None:intergenic
TGGCTTTGAAAATGAAGACT+GGG 0.604797 tig0021332:+84896 Msa1390210:CDS
CCTTCGAGACACCAGCAGAT+CGG 0.606205 tig0021332:-81460 None:intergenic
GTCTCAGATGCGTAAGCGTG+CGG 0.606283 tig0021332:+85443 Msa1390210:CDS
CGGTCCTCAAGAAGTTGACA+GGG 0.611668 tig0021332:+84752 Msa1390210:CDS
GCCTCTATACTAATTAAATG+TGG 0.613343 tig0021332:-84696 None:intergenic
ATGTATCAGAAAATATGCAC+AGG 0.613792 tig0021332:+85072 Msa1390210:CDS
TGAATGTGTATCTTCAGAGA+AGG 0.614761 tig0021332:+87076 Msa1390210:CDS
GTTGTCGGCATGCAAAGCGA+TGG 0.618770 tig0021332:-83540 None:intergenic
TGTTTGCAAACATTTGCAGT+CGG 0.619824 tig0021332:+82458 Msa1390210:CDS
AAGGAGAAGGGTAAGGATCG+AGG 0.620325 tig0021332:+87673 Msa1390210:CDS
CTCACCGCATTCTGTTCCAA+AGG 0.623895 tig0021332:-79539 None:intergenic
GAGCAAGCCTCCTGAGCACG+AGG 0.625792 tig0021332:+83642 Msa1390210:CDS
GATGGCTTACCTCTACGGCT+AGG 0.632035 tig0021332:-85623 None:intergenic
TCTAACAGTCTTATCGGCGG+CGG 0.637627 tig0021332:-78524 None:intergenic
TTTACCGTATTAACGGGTGT+AGG 0.638613 tig0021332:-87740 None:intergenic
ACAGGCGAAACAATCTCACT+TGG 0.638932 tig0021332:+84569 Msa1390210:intron
ACAGTCAATGATAACTTGAG+AGG 0.640681 tig0021332:-80804 None:intergenic
ATTGATCTTGTGATGTGGCA+CGG 0.642720 tig0021332:+84732 Msa1390210:CDS
CGACGTTGGAAGTTGAAGAG+AGG 0.645167 tig0021332:-78376 None:intergenic
GAAGGAAACTACGCGGTCGG+CGG 0.652571 tig0021332:-78407 None:intergenic
ACGGGTGTAGGAACCACAGA+AGG 0.658227 tig0021332:-87728 None:intergenic
ATGCATTTATGCTGTTCTTG+GGG 0.658448 tig0021332:+84947 Msa1390210:CDS
GCTGAAGTTCCATTTGAGTG+TGG 0.658594 tig0021332:+85579 Msa1390210:CDS
AGCATGCCAGATCGTATCTG+AGG 0.658832 tig0021332:+78552 Msa1390210:CDS
ACGGCGAAGATGAAAGAGCG+TGG 0.665687 tig0021332:-78171 None:intergenic
TTTGCCCTGAAGAAAGCGCA+TGG 0.666320 tig0021332:-83905 None:intergenic
CATTAATTGATCTTGTGATG+TGG 0.666350 tig0021332:+84727 Msa1390210:CDS
TCAAACGGTGACACAGCAGA+AGG 0.669228 tig0021332:+81665 Msa1390210:CDS
ATGCCTCTCAACAAATCACA+AGG 0.670448 tig0021332:+85214 Msa1390210:CDS
CATCTGAGACACCATAAAAG+GGG 0.671973 tig0021332:-85430 None:intergenic
TGAGCTTAGATAAAAGCACA+GGG 0.674749 tig0021332:-85031 None:intergenic
TCTCAATACCAAATGGCCAA+CGG 0.678875 tig0021332:-88126 None:intergenic
TTCCAGCTATGCGTTCAATG+TGG 0.679058 tig0021332:+85379 Msa1390210:CDS
GAAGCAGTGAGTGAAAACTC+TGG 0.680430 tig0021332:+85525 Msa1390210:CDS
AGTTCCATTTGAGTGTGGTG+AGG 0.698415 tig0021332:+85584 Msa1390210:CDS
AAATCTAACAGTCTTATCGG+CGG 0.703856 tig0021332:-78527 None:intergenic
AGTTAAATATGTAGCTAACG+TGG 0.709647 tig0021332:+87905 Msa1390210:exon
AGTAAGCGAGTCTGTCATGG+AGG 0.714491 tig0021332:+81580 Msa1390210:CDS
AGGACCATAATTCTTCGGAG+AGG 0.720024 tig0021332:+81428 Msa1390210:CDS
ATTAGCAAAGAAAGTCCATG+CGG 0.752414 tig0021332:+83747 Msa1390210:CDS
GGTACGAGACAAGATCCATG+TGG 0.780307 tig0021332:+79430 Msa1390210:CDS
AGGAGACGAAGGAAACTACG+CGG 0.857713 tig0021332:-78414 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTTTTATTTTTGACAA+AGG - tig0021332:79825-79844 None:intergenic 10.0%
!!! TTACAAAATAAAAAATGTTT+TGG + tig0021332:79980-79999 Msa1390210:intron 10.0%
!! AATATAAATGATTCATTTAA+TGG - tig0021332:80271-80290 None:intergenic 10.0%
!! ATATCTCAAAATAATTAAAA+AGG - tig0021332:81269-81288 None:intergenic 10.0%
!! TTTCAAAAACAAATATAAAA+TGG + tig0021332:81765-81784 Msa1390210:intron 10.0%
!! TTTAAACTAAAATTTCATAT+TGG - tig0021332:82080-82099 None:intergenic 10.0%
!! TGAGAAATAAAAAAAAAAAA+TGG - tig0021332:82514-82533 None:intergenic 10.0%
!! AAAATAAAAAGTAAAAATGA+TGG - tig0021332:85280-85299 None:intergenic 10.0%
!!! TTTAAAAGAAACTTATTTTA+AGG + tig0021332:85939-85958 Msa1390210:intron 10.0%
!!! ATCTAATTTTTAAATTTAGT+TGG - tig0021332:87325-87344 None:intergenic 10.0%
!!! AAATGAGTTTAAGTTTTAAA+TGG + tig0021332:78682-78701 Msa1390210:intron 15.0%
!! TATTATTGAGAATTTAAACA+TGG + tig0021332:78798-78817 Msa1390210:intron 15.0%
!! CAATTAATAAACACATTAAT+TGG - tig0021332:78969-78988 None:intergenic 15.0%
!!! TTATATAGTTTTTATGTGTA+TGG + tig0021332:80425-80444 Msa1390210:intron 15.0%
!! TATTTACAAATTACACTTTA+AGG - tig0021332:80932-80951 None:intergenic 15.0%
!! TTAAATTATTGAAAGATGAA+TGG + tig0021332:81489-81508 Msa1390210:CDS 15.0%
!!! AATCATGTTCTTTTAATTTA+TGG + tig0021332:82724-82743 Msa1390210:intron 15.0%
!! CAAAAAATAATAAACACAAA+AGG - tig0021332:82860-82879 None:intergenic 15.0%
!!! CTTTTGTGTTTATTATTTTT+TGG + tig0021332:82858-82877 Msa1390210:intron 15.0%
!! CAAAAAATAATAAACACAAA+AGG - tig0021332:82860-82879 None:intergenic 15.0%
!!! CTTTTGTGTTTATTATTTTT+TGG + tig0021332:82858-82877 Msa1390210:intron 15.0%
!! GAAGTATAATTATTACTATT+AGG + tig0021332:83231-83250 Msa1390210:intron 15.0%
!! AATCATAAATCTCAATAATT+TGG - tig0021332:83274-83293 None:intergenic 15.0%
!! GCAAGAATTAAATATAAATT+TGG + tig0021332:84162-84181 Msa1390210:intron 15.0%
!!! ATTTCATTGCATTTTTAATT+CGG - tig0021332:84369-84388 None:intergenic 15.0%
!! TTTACGAAATAAAACAATTA+AGG - tig0021332:85332-85351 None:intergenic 15.0%
!!! TAATTTTAACTATAAGAATC+TGG - tig0021332:86528-86547 None:intergenic 15.0%
!!! TTTTTAGTTTGTTAGGTTTT+AGG + tig0021332:78623-78642 Msa1390210:intron 20.0%
!! TTAATAATTGTAGATAGATC+TGG + tig0021332:78908-78927 Msa1390210:intron 20.0%
!!! TTAATGAGTTGGATTAAATA+TGG + tig0021332:79185-79204 Msa1390210:intron 20.0%
!!! TCACTATTTTTGTTATGATT+TGG + tig0021332:79308-79327 Msa1390210:intron 20.0%
!!! TGATTTTGTAGATAATATTG+CGG + tig0021332:79342-79361 Msa1390210:intron 20.0%
!! AAAACATTCAATAATCCAAT+TGG - tig0021332:79569-79588 None:intergenic 20.0%
!!! TTTATTTTGTAAGAGTTTCA+CGG - tig0021332:79972-79991 None:intergenic 20.0%
!!! TCTAAGATGAAATGAATAAA+TGG - tig0021332:80006-80025 None:intergenic 20.0%
!! ACTTATTTACTTTATACTAC+CGG + tig0021332:80326-80345 Msa1390210:intron 20.0%
!!! TATAGTCTTATTATTGGAAT+TGG + tig0021332:80633-80652 Msa1390210:intron 20.0%
!!! ACATTTTCAAGTTTAATAAC+AGG - tig0021332:80732-80751 None:intergenic 20.0%
!! ACATGGTAATAAATTGTAAT+TGG + tig0021332:81223-81242 Msa1390210:intron 20.0%
!! TCAAAATAATTAAAAAGGAC+TGG - tig0021332:81264-81283 None:intergenic 20.0%
!! TTGAGCAAAATATGTTAAAA+AGG - tig0021332:81352-81371 None:intergenic 20.0%
!! ATCATTATTCATAACAAACA+CGG - tig0021332:81805-81824 None:intergenic 20.0%
!! TGTTATGAATAATGATTATG+AGG + tig0021332:81809-81828 Msa1390210:intron 20.0%
!! CAAAATAAAGTAAGACAATT+AGG - tig0021332:81959-81978 None:intergenic 20.0%
!! ATTGTACAAAAAGTTATTGA+TGG + tig0021332:82112-82131 Msa1390210:intron 20.0%
!! TTGTACAAAAAGTTATTGAT+GGG + tig0021332:82113-82132 Msa1390210:intron 20.0%
!! CAATAACATATGCATTAAAA+TGG - tig0021332:82758-82777 None:intergenic 20.0%
!!! CATTTTAATGCATATGTTAT+TGG + tig0021332:82756-82775 Msa1390210:intron 20.0%
!! AATCATAAATCTCAGTAATT+TGG - tig0021332:82934-82953 None:intergenic 20.0%
!!! AATCATGCTCTTTTAATTTA+TGG + tig0021332:83058-83077 Msa1390210:intron 20.0%
!! CAATAACATATGCATTAAAA+TGG - tig0021332:82758-82777 None:intergenic 20.0%
!!! CATTTTAATGCATATGTTAT+TGG + tig0021332:82756-82775 Msa1390210:intron 20.0%
!! ATAAATCTCAATAATTTGGA+TGG - tig0021332:83270-83289 None:intergenic 20.0%
!!! GTGTTTTAGTTTACAATAAT+AGG + tig0021332:84088-84107 Msa1390210:intron 20.0%
!!! ATAATTGTAGATTTTGTTTG+AGG + tig0021332:84504-84523 Msa1390210:intron 20.0%
!!! TAATTGTAGATTTTGTTTGA+GGG + tig0021332:84505-84524 Msa1390210:intron 20.0%
!! ATTGTTTACTAACTATTTAC+TGG + tig0021332:84529-84548 Msa1390210:intron 20.0%
!! GTAAGATATGATATTCAAAT+AGG - tig0021332:85304-85323 None:intergenic 20.0%
!!! AGTTTCCTCATAATTTTTAT+GGG - tig0021332:87041-87060 None:intergenic 20.0%
!!! AAGTTTCCTCATAATTTTTA+TGG - tig0021332:87042-87061 None:intergenic 20.0%
!!! GTTTTCCTTCAAAAAAAAAT+AGG - tig0021332:87568-87587 None:intergenic 20.0%
!!! ATTTTTTTTTGAAGGAAAAC+TGG + tig0021332:87568-87587 Msa1390210:intron 20.0%
!! TCTTCAAATTCATCAATTAT+GGG - tig0021332:87830-87849 None:intergenic 20.0%
!! TCTAAATCTAACAGTCTTAT+CGG - tig0021332:78533-78552 None:intergenic 25.0%
!!! TCTTCTGTTTTTAGTTTGTT+AGG + tig0021332:78616-78635 Msa1390210:intron 25.0%
! TAAGTTAGACTCAATTATGA+AGG + tig0021332:78765-78784 Msa1390210:intron 25.0%
! TTGAAAAGATTGTGGAAAAT+AGG + tig0021332:79029-79048 Msa1390210:intron 25.0%
!! TAGTTTCTTATAGCTTTTCA+AGG - tig0021332:79147-79166 None:intergenic 25.0%
!! TGTTTTGTGTATACTGTATA+GGG + tig0021332:79625-79644 Msa1390210:intron 25.0%
! ATTAATAGAAGTTCATCTGA+GGG + tig0021332:79658-79677 Msa1390210:intron 25.0%
! GTTAATTTCTTATACTAGCA+AGG + tig0021332:79703-79722 Msa1390210:intron 25.0%
!! CTACTTGAAATTTTTGTATC+AGG + tig0021332:79748-79767 Msa1390210:intron 25.0%
! TCAAAATTGTAACTATCCTT+GGG - tig0021332:79791-79810 None:intergenic 25.0%
! ATCAAAAACACAATGCAATA+GGG - tig0021332:79909-79928 None:intergenic 25.0%
! AATCAAAAACACAATGCAAT+AGG - tig0021332:79910-79929 None:intergenic 25.0%
! CTTATTTACTTTATACTACC+GGG + tig0021332:80327-80346 Msa1390210:intron 25.0%
! TCTTTCTTTATTCATTAACC+TGG + tig0021332:80588-80607 Msa1390210:intron 25.0%
!!! CTTGTGTATAGTCTTATTAT+TGG + tig0021332:80627-80646 Msa1390210:intron 25.0%
!!! TGGTCTAGAATTTTTTAAAC+AGG + tig0021332:80995-81014 Msa1390210:intron 25.0%
! CAAAATATGTTAAAAAGGAC+CGG - tig0021332:81347-81366 None:intergenic 25.0%
! AAAAGGCAAAGATTACAAAA+AGG - tig0021332:81378-81397 None:intergenic 25.0%
!! AGATACTTCAAAAGTTCTAA+AGG - tig0021332:81539-81558 None:intergenic 25.0%
! ATAGTAGATATTTACGTGAA+TGG - tig0021332:81994-82013 None:intergenic 25.0%
! TGTACAAAAAGTTATTGATG+GGG + tig0021332:82114-82133 Msa1390210:intron 25.0%
! AAATTTCGTGAGAAGATTTA+TGG + tig0021332:82202-82221 Msa1390210:intron 25.0%
! ATATGCAAAGCAGTAAATTA+TGG - tig0021332:82362-82381 None:intergenic 25.0%
! TGCTTTGCATATTAATTGTA+GGG + tig0021332:82370-82389 Msa1390210:intron 25.0%
!! TTCCTTTTATCTCATATTAG+TGG + tig0021332:82536-82555 Msa1390210:intron 25.0%
! AACCACTAATATGAGATAAA+AGG - tig0021332:82541-82560 None:intergenic 25.0%
!!! ATGGTATTTTTGTACAGAAT+TGG + tig0021332:82650-82669 Msa1390210:intron 25.0%
!!! TGGTATTTTTGTACAGAATT+GGG + tig0021332:82651-82670 Msa1390210:intron 25.0%
! TGTTATATCCCAAAAGAAAA+AGG + tig0021332:82678-82697 Msa1390210:intron 25.0%
! GTTATATCCCAAAAGAAAAA+GGG + tig0021332:82679-82698 Msa1390210:intron 25.0%
!! AATTAGTCCCTTTTTCTTTT+GGG - tig0021332:82689-82708 None:intergenic 25.0%
! GAAGTATAATTATCACCATT+TGG + tig0021332:82896-82915 Msa1390210:intron 25.0%
! ATAAATCTCAGTAATTTGGA+TGG - tig0021332:82930-82949 None:intergenic 25.0%
! GTAAGAAATTTACTTTCTGA+TGG + tig0021332:84435-84454 Msa1390210:intron 25.0%
!! GACATTCTTGATCTTTTATA+CGG + tig0021332:84873-84892 Msa1390210:CDS 25.0%
! CTAAATTAGCTAATTGTACA+GGG - tig0021332:85132-85151 None:intergenic 25.0%
! TCTAAATTAGCTAATTGTAC+AGG - tig0021332:85133-85152 None:intergenic 25.0%
!!! GTTTTATTTCGTAAATACAG+AGG + tig0021332:85337-85356 Msa1390210:intron 25.0%
! TTTAACAAACTTCATGTTTG+TGG - tig0021332:85648-85667 None:intergenic 25.0%
! GCAATTAAAACAGAATTATG+TGG - tig0021332:85767-85786 None:intergenic 25.0%
!!! TCTGTTTTAATTGCTTCTAA+AGG + tig0021332:85773-85792 Msa1390210:intron 25.0%
! AATATGATATCTGCATATCA+TGG + tig0021332:85848-85867 Msa1390210:intron 25.0%
!! AATATCTTAATGAGTTGAAC+AGG + tig0021332:85990-86009 Msa1390210:intron 25.0%
!! ATATCTTAATGAGTTGAACA+GGG + tig0021332:85991-86010 Msa1390210:intron 25.0%
!!! AGGGAAAGTTGATTTTTAAT+GGG + tig0021332:86010-86029 Msa1390210:intron 25.0%
!!! TACTCAATTTTAATAGTGCA+CGG + tig0021332:86053-86072 Msa1390210:intron 25.0%
! TGAATAAAGTTACTCCAATT+TGG + tig0021332:86232-86251 Msa1390210:intron 25.0%
! TTATCAGTAAATGCAATTAG+AGG + tig0021332:86502-86521 Msa1390210:intron 25.0%
!!! ACCTTTTTGTTGTATATTCT+TGG + tig0021332:86551-86570 Msa1390210:intron 25.0%
! TCCAAGAATATACAACAAAA+AGG - tig0021332:86555-86574 None:intergenic 25.0%
! TATATGAATTTCATGTCAGA+TGG + tig0021332:86840-86859 Msa1390210:intron 25.0%
!! AGAAGAAGTTAATCTCATTT+TGG + tig0021332:87175-87194 Msa1390210:CDS 25.0%
!! GAAGAAGTTAATCTCATTTT+GGG + tig0021332:87176-87195 Msa1390210:CDS 25.0%
! ATATTATTATGATTGATGCG+AGG + tig0021332:87269-87288 Msa1390210:intron 25.0%
!!! ACCATCCTATTTTTTTTTGA+AGG + tig0021332:87560-87579 Msa1390210:intron 25.0%
! TCCTTCAAAAAAAAATAGGA+TGG - tig0021332:87564-87583 None:intergenic 25.0%
! CTCTTCAAATTCATCAATTA+TGG - tig0021332:87831-87850 None:intergenic 25.0%
! CATAATTGATGAATTTGAAG+AGG + tig0021332:87829-87848 Msa1390210:CDS 25.0%
!! TATTGTTTGATTTAGATTGC+AGG + tig0021332:87974-87993 Msa1390210:three_prime_UTR 25.0%
! TTCCACAATCTTTTCAAAAC+AGG - tig0021332:79026-79045 None:intergenic 30.0%
AGATCTAGAGATTAATGAGT+TGG + tig0021332:79174-79193 Msa1390210:intron 30.0%
AGAAGTGAGCAATGATTTAT+GGG + tig0021332:79379-79398 Msa1390210:intron 30.0%
TGATAGAATGTATGAAGGTT+AGG + tig0021332:79408-79427 Msa1390210:intron 30.0%
GATAGAATGTATGAAGGTTA+GGG + tig0021332:79409-79428 Msa1390210:intron 30.0%
GCATCTCAAGAAATAAATCA+AGG - tig0021332:79517-79536 None:intergenic 30.0%
! CTGTTTTGTGTATACTGTAT+AGG + tig0021332:79624-79643 Msa1390210:intron 30.0%
GATTAATAGAAGTTCATCTG+AGG + tig0021332:79657-79676 Msa1390210:intron 30.0%
GCTTAGCATTGTAATATCAT+TGG + tig0021332:79725-79744 Msa1390210:intron 30.0%
! TGCTTTAATGATTTTACCCA+AGG + tig0021332:79772-79791 Msa1390210:intron 30.0%
GTCAAAATTGTAACTATCCT+TGG - tig0021332:79792-79811 None:intergenic 30.0%
!! TGCATTGTGTTTTTGATTAG+CGG + tig0021332:79912-79931 Msa1390210:intron 30.0%
! CGTTGTCATTTAGAATTTCA+TGG - tig0021332:80098-80117 None:intergenic 30.0%
AGAAAAATAACAAGACAGGA+GGG - tig0021332:80128-80147 None:intergenic 30.0%
TAGAAAAATAACAAGACAGG+AGG - tig0021332:80129-80148 None:intergenic 30.0%
GAGTAGAAAAATAACAAGAC+AGG - tig0021332:80132-80151 None:intergenic 30.0%
AGTCCAAAAAGTGATAGAAA+AGG - tig0021332:80222-80241 None:intergenic 30.0%
TATACACAAGATTCAAGACT+CGG - tig0021332:80617-80636 None:intergenic 30.0%
TTAAACTTGAAAATGTGTGC+AGG + tig0021332:80736-80755 Msa1390210:intron 30.0%
AATTTCCTCTTCAAAGCTTA+AGG + tig0021332:80882-80901 Msa1390210:CDS 30.0%
!! ATTTACCTTAAGCTTTGAAG+AGG - tig0021332:80890-80909 None:intergenic 30.0%
TTCAAAGCTTAAGGTAAATG+TGG + tig0021332:80891-80910 Msa1390210:intron 30.0%
TTGTCTACTCTTGAAATCAT+TGG + tig0021332:80961-80980 Msa1390210:intron 30.0%
! AATCATTGGTCTAGAATCAT+TGG + tig0021332:80975-80994 Msa1390210:intron 30.0%
!!! ATTTTTTAAACAGGAGCACA+TGG + tig0021332:81004-81023 Msa1390210:intron 30.0%
!!! TTTTTTAAACAGGAGCACAT+GGG + tig0021332:81005-81024 Msa1390210:intron 30.0%
TACAAACTGTAACCAGTAAT+GGG - tig0021332:81078-81097 None:intergenic 30.0%
ATACAAACTGTAACCAGTAA+TGG - tig0021332:81079-81098 None:intergenic 30.0%
TAGATTCAATGTCTTAGAAG+AGG - tig0021332:81193-81212 None:intergenic 30.0%
GAATCTATTGACATTTGACA+TGG + tig0021332:81206-81225 Msa1390210:intron 30.0%
CCTATAAATACATCTGTCAA+CGG + tig0021332:81302-81321 Msa1390210:intron 30.0%
GGTTTAGTAAAGCTAAAGAA+TGG + tig0021332:81617-81636 Msa1390210:CDS 30.0%
! TGACTTTTTATGCGCATTTT+AGG - tig0021332:82057-82076 None:intergenic 30.0%
CCTACAAGCTAAAAAATAAC+AGG - tig0021332:82304-82323 None:intergenic 30.0%
!!! CCTGTTATTTTTTAGCTTGT+AGG + tig0021332:82301-82320 Msa1390210:intron 30.0%
!! TTTAGCTTGTAGGTTAGATT+AGG + tig0021332:82311-82330 Msa1390210:intron 30.0%
AGATTAGGATTTAACCTGAT+TGG + tig0021332:82326-82345 Msa1390210:intron 30.0%
CTGCTTTGCATATTAATTGT+AGG + tig0021332:82369-82388 Msa1390210:intron 30.0%
GCTTTGCATATTAATTGTAG+GGG + tig0021332:82371-82390 Msa1390210:intron 30.0%
TTGCCAAATAGCAGAAATAT+GGG + tig0021332:82570-82589 Msa1390210:intron 30.0%
ATCTTTATCAGTCAGTATCA+TGG + tig0021332:82631-82650 Msa1390210:intron 30.0%
! CAATTAGTCCCTTTTTCTTT+TGG - tig0021332:82690-82709 None:intergenic 30.0%
ACAAAAGGATACTAGAAAGA+CGG - tig0021332:82845-82864 None:intergenic 30.0%
ACAAAAGGATACTAGAAAGA+AGG - tig0021332:82845-82864 None:intergenic 30.0%
!!! CAGGAAGAATTTTTTCTAGA+AGG - tig0021332:83387-83406 None:intergenic 30.0%
CTGGTACGTATAAGTTTATT+CGG + tig0021332:83452-83471 Msa1390210:intron 30.0%
TACGTATAAGTTTATTCGGA+TGG + tig0021332:83456-83475 Msa1390210:intron 30.0%
CTTAAGTATGCATTAGAGTT+GGG - tig0021332:83492-83511 None:intergenic 30.0%
ACTTAAGTATGCATTAGAGT+TGG - tig0021332:83493-83512 None:intergenic 30.0%
TTTCTTTGCTAATTTGGCTA+TGG - tig0021332:83740-83759 None:intergenic 30.0%
ATGGACTTTCTTTGCTAATT+TGG - tig0021332:83746-83765 None:intergenic 30.0%
ACAATTTCTTCAAATTCACC+AGG - tig0021332:83775-83794 None:intergenic 30.0%
TAAAAGGCCAATAAGAGAAA+GGG - tig0021332:83869-83888 None:intergenic 30.0%
!! ACACTGCATTTTTCAGTAAA+AGG - tig0021332:83885-83904 None:intergenic 30.0%
TCGAAGAATAGTTCATTCTT+TGG + tig0021332:84256-84275 Msa1390210:intron 30.0%
TTACTACAATGTACATACTG+CGG - tig0021332:84419-84438 None:intergenic 30.0%
! AATTTACTTTCTGATGGACA+AGG + tig0021332:84441-84460 Msa1390210:intron 30.0%
!! CGATTTGATAATTTGCTTCA+GGG + tig0021332:84469-84488 Msa1390210:intron 30.0%
TTACTAACTATTTACTGGTG+CGG + tig0021332:84534-84553 Msa1390210:intron 30.0%
TGTTTCAAAAGTTCAGCATT+TGG - tig0021332:84651-84670 None:intergenic 30.0%
CTAAGGACTTCATACATTAA+GGG + tig0021332:84672-84691 Msa1390210:CDS 30.0%
TAAGGACTTCATACATTAAG+GGG + tig0021332:84673-84692 Msa1390210:CDS 30.0%
GCCACATTTAATTAGTATAG+AGG + tig0021332:84695-84714 Msa1390210:CDS 30.0%
GCCTCTATACTAATTAAATG+TGG - tig0021332:84699-84718 None:intergenic 30.0%
CATTTAATTAGTATAGAGGC+TGG + tig0021332:84699-84718 Msa1390210:CDS 30.0%
CATTAATTGATCTTGTGATG+TGG + tig0021332:84727-84746 Msa1390210:CDS 30.0%
ATTTCTTGTCACAGTTTACT+TGG - tig0021332:84800-84819 None:intergenic 30.0%
! ATTCTTGATCTTTTATACGG+TGG + tig0021332:84876-84895 Msa1390210:CDS 30.0%
TCATCTTCATTGCTAGTTAA+AGG - tig0021332:84927-84946 None:intergenic 30.0%
AATGCATTTATGCTGTTCTT+GGG + tig0021332:84946-84965 Msa1390210:CDS 30.0%
ATGTATCAGAAAATATGCAC+AGG + tig0021332:85072-85091 Msa1390210:CDS 30.0%
TTGAATATCATATCTTACGC+CGG + tig0021332:85306-85325 Msa1390210:intron 30.0%
CGAAATAAAACAATTAAGGC+CGG - tig0021332:85328-85347 None:intergenic 30.0%
! AATACAGAGGTGTATATTGA+AGG + tig0021332:85350-85369 Msa1390210:intron 30.0%
TCAGTCTCTTTAACGAATAA+TGG - tig0021332:85507-85526 None:intergenic 30.0%
TCACCTAACTTGATATTCAA+AGG + tig0021332:85691-85710 Msa1390210:intron 30.0%
!! CAGGGAAAGTTGATTTTTAA+TGG + tig0021332:86009-86028 Msa1390210:intron 30.0%
!! GGGAAAGTTGATTTTTAATG+GGG + tig0021332:86011-86030 Msa1390210:intron 30.0%
!! ACACATTTTAGCACAGAAAA+AGG + tig0021332:86096-86115 Msa1390210:intron 30.0%
!! CACATTTTAGCACAGAAAAA+GGG + tig0021332:86097-86116 Msa1390210:intron 30.0%
GTTTGGACAAAAGATTAAAG+TGG - tig0021332:86166-86185 None:intergenic 30.0%
TGTCCAAACATTGCATAAAA+TGG + tig0021332:86177-86196 Msa1390210:intron 30.0%
! GTTCCATTTTATGCAATGTT+TGG - tig0021332:86183-86202 None:intergenic 30.0%
! TAAAATGGAACCTAGGATTT+TGG + tig0021332:86192-86211 Msa1390210:intron 30.0%
ATAATTCAGTCCAAAATCCT+AGG - tig0021332:86205-86224 None:intergenic 30.0%
! TTTTGGACTGAATTATTGTG+CGG + tig0021332:86209-86228 Msa1390210:intron 30.0%
CTAAATTAGCTCATCCAAAT+TGG - tig0021332:86249-86268 None:intergenic 30.0%
TTAGCTTCTTCAAAATTGTG+CGG + tig0021332:86265-86284 Msa1390210:intron 30.0%
GTAAGTAACTTAACCCATTT+GGG - tig0021332:86429-86448 None:intergenic 30.0%
AAACTGAAAATAGTCTGAAC+TGG + tig0021332:86678-86697 Msa1390210:intron 30.0%
AACTGAAAATAGTCTGAACT+GGG + tig0021332:86679-86698 Msa1390210:intron 30.0%
AGCAGAATTAAGCAATATAG+TGG - tig0021332:86749-86768 None:intergenic 30.0%
ACTATATTGCTTAATTCTGC+TGG + tig0021332:86748-86767 Msa1390210:intron 30.0%
TCTTTCTCTTCACTGTATAA+CGG - tig0021332:86813-86832 None:intergenic 30.0%
! TTTTTCTTTCCTCTCTGTTA+AGG + tig0021332:86914-86933 Msa1390210:intron 30.0%
! TACTTGTCTCACTTCATTTT+CGG + tig0021332:87000-87019 Msa1390210:CDS 30.0%
! ATTTTCGGTTATCAGAACAA+GGG + tig0021332:87015-87034 Msa1390210:CDS 30.0%
TGTTAAAGAATTGAAACGCA+TGG + tig0021332:87103-87122 Msa1390210:CDS 30.0%
GTCAATTGTCATTAGATGAT+CGG - tig0021332:87129-87148 None:intergenic 30.0%
ATCATCTAATGACAATTGAC+AGG + tig0021332:87129-87148 Msa1390210:CDS 30.0%
ATCAATTATGGGTGATCTAA+TGG - tig0021332:87819-87838 None:intergenic 30.0%
ACATATTTAACTAGACTGGT+TGG - tig0021332:87897-87916 None:intergenic 30.0%
AGCTACATATTTAACTAGAC+TGG - tig0021332:87901-87920 None:intergenic 30.0%
AGTTAAATATGTAGCTAACG+TGG + tig0021332:87905-87924 Msa1390210:exon 30.0%
GTAGAACATAATGCAGATTA+GGG - tig0021332:88175-88194 None:intergenic 30.0%
AGTAGAACATAATGCAGATT+AGG - tig0021332:88176-88195 None:intergenic 30.0%
!! TTTGAGATAAGCGATTTTCG+TGG - tig0021332:78222-78241 None:intergenic 35.0%
AATTAGGGATTTGGAGAAAG+CGG - tig0021332:78356-78375 None:intergenic 35.0%
GAAGTTGAAGAGAGGAATTA+GGG - tig0021332:78371-78390 None:intergenic 35.0%
! AAATCTAACAGTCTTATCGG+CGG - tig0021332:78530-78549 None:intergenic 35.0%
!!! AGCCTGTTTTGAAAAGATTG+TGG + tig0021332:79021-79040 Msa1390210:intron 35.0%
AGATTGTGGAAAATAGGCTT+AGG + tig0021332:79035-79054 Msa1390210:intron 35.0%
! TGGTTTGTGATAGAAAGCTA+TGG + tig0021332:79205-79224 Msa1390210:intron 35.0%
GTAGATAATATTGCGGTTAC+CGG + tig0021332:79349-79368 Msa1390210:intron 35.0%
CAGAAGTGAGCAATGATTTA+TGG + tig0021332:79378-79397 Msa1390210:intron 35.0%
TAAATCAAGGATGTCAACGT+TGG - tig0021332:79504-79523 None:intergenic 35.0%
ATTTCTTGAGATGCTTCCTT+TGG + tig0021332:79523-79542 Msa1390210:CDS 35.0%
AAAGCACAAACAGAAACAGA+GGG - tig0021332:80062-80081 None:intergenic 35.0%
! AAAAGCACAAACAGAAACAG+AGG - tig0021332:80063-80082 None:intergenic 35.0%
!!! TCTGTTTCTGTTTGTGCTTT+TGG + tig0021332:80062-80081 Msa1390210:intron 35.0%
!! TGGCCTTTTCTATCACTTTT+TGG + tig0021332:80216-80235 Msa1390210:intron 35.0%
TTGCTATCAATACTCAAACC+CGG - tig0021332:80348-80367 None:intergenic 35.0%
CATACCACTATAGTGTTTCA+GGG + tig0021332:80510-80529 Msa1390210:intron 35.0%
ATACCACTATAGTGTTTCAG+GGG + tig0021332:80511-80530 Msa1390210:intron 35.0%
AGATTAAGCAATGTAGCCAA+TGG - tig0021332:80553-80572 None:intergenic 35.0%
! AGATCTGCATGGAACATTTT+AGG + tig0021332:80657-80676 Msa1390210:intron 35.0%
!!! TGCATGGAACATTTTAGGAT+TGG + tig0021332:80662-80681 Msa1390210:intron 35.0%
ACAGTCAATGATAACTTGAG+AGG - tig0021332:80807-80826 None:intergenic 35.0%
! AGTTATCATTGACTGTACCT+TGG + tig0021332:80811-80830 Msa1390210:CDS 35.0%
TGATTTCAAGAGTAGACAAG+TGG - tig0021332:80960-80979 None:intergenic 35.0%
! ACCAGTAATGGGAAAATCAA+CGG - tig0021332:81067-81086 None:intergenic 35.0%
TGCATTGTATGTGCACTTTA+GGG - tig0021332:81108-81127 None:intergenic 35.0%
TTGCATTGTATGTGCACTTT+AGG - tig0021332:81109-81128 None:intergenic 35.0%
AAAGTGCACATACAATGCAA+AGG + tig0021332:81109-81128 Msa1390210:intron 35.0%
! CAATGTCTTAGAAGAGGTAT+AGG - tig0021332:81187-81206 None:intergenic 35.0%
CCGTTGACAGATGTATTTAT+AGG - tig0021332:81305-81324 None:intergenic 35.0%
ATAAATACATCTGTCAACGG+TGG + tig0021332:81305-81324 Msa1390210:intron 35.0%
!! TGGATTTCCTATTGTTTTGC+CGG + tig0021332:81325-81344 Msa1390210:intron 35.0%
!! TCTTTGCCTTTTTATTTGCC+TGG + tig0021332:81386-81405 Msa1390210:intron 35.0%
CAGAAACCAGGCAAATAAAA+AGG - tig0021332:81395-81414 None:intergenic 35.0%
!! TGGCTTATAAAGTGCTGTAA+TGG + tig0021332:81509-81528 Msa1390210:CDS 35.0%
CAGCAGCATATAACATCAAA+CGG + tig0021332:81650-81669 Msa1390210:CDS 35.0%
ATTTATGGAACTGGTCAATC+AGG + tig0021332:82217-82236 Msa1390210:intron 35.0%
TGCATATTAATTGTAGGGGA+AGG + tig0021332:82375-82394 Msa1390210:intron 35.0%
GCATATTAATTGTAGGGGAA+GGG + tig0021332:82376-82395 Msa1390210:intron 35.0%
CATATTAATTGTAGGGGAAG+GGG + tig0021332:82377-82396 Msa1390210:intron 35.0%
TCCACCAAGCATTATATTGA+TGG + tig0021332:82407-82426 Msa1390210:CDS 35.0%
TCCATCAATATAATGCTTGG+TGG - tig0021332:82411-82430 None:intergenic 35.0%
GCTTCCATCAATATAATGCT+TGG - tig0021332:82414-82433 None:intergenic 35.0%
CATTATATTGATGGAAGCAG+AGG + tig0021332:82416-82435 Msa1390210:CDS 35.0%
TGTTTGCAAACATTTGCAGT+CGG + tig0021332:82458-82477 Msa1390210:CDS 35.0%
GTTGCCAAATAGCAGAAATA+TGG + tig0021332:82569-82588 Msa1390210:intron 35.0%
TGGATGGAAAAAAGTCCAAA+TGG - tig0021332:82914-82933 None:intergenic 35.0%
! TTTATGATTTGTGCCCCAAT+AGG + tig0021332:82945-82964 Msa1390210:intron 35.0%
GTGTCCAATCTAATATTTGC+AGG + tig0021332:83511-83530 Msa1390210:intron 35.0%
TGGTCCTGCAAATATTAGAT+TGG - tig0021332:83518-83537 None:intergenic 35.0%
!! TTTTGGTGGAGATACTGATT+GGG + tig0021332:83708-83727 Msa1390210:CDS 35.0%
ATTAGCAAAGAAAGTCCATG+CGG + tig0021332:83747-83766 Msa1390210:CDS 35.0%
ATACACACCCTTTCTCTTAT+TGG + tig0021332:83859-83878 Msa1390210:CDS 35.0%
GTAAAAGGCCAATAAGAGAA+AGG - tig0021332:83870-83889 None:intergenic 35.0%
AAAGATTGGAGTAGTTCTTC+AGG - tig0021332:83940-83959 None:intergenic 35.0%
TCCAATCTTTACTTCTTCCT+GGG + tig0021332:83950-83969 Msa1390210:CDS 35.0%
ATCAGTCAGAATTCAGAACA+AGG - tig0021332:84137-84156 None:intergenic 35.0%
ATCGTTGTTCATTTAGCCAT+GGG - tig0021332:84317-84336 None:intergenic 35.0%
TATCGTTGTTCATTTAGCCA+TGG - tig0021332:84318-84337 None:intergenic 35.0%
!! GCGATTTGATAATTTGCTTC+AGG + tig0021332:84468-84487 Msa1390210:intron 35.0%
AGAATTGCTGTAAGATGTCT+TGG + tig0021332:84600-84619 Msa1390210:CDS 35.0%
TAAGATGTCTTGGTCTCTTT+GGG + tig0021332:84610-84629 Msa1390210:CDS 35.0%
!!! CTGAACTTTTGAAACAGCTA+AGG + tig0021332:84655-84674 Msa1390210:CDS 35.0%
GCTAAGGACTTCATACATTA+AGG + tig0021332:84671-84690 Msa1390210:CDS 35.0%
TGAACTTCTCTGATTCTGAA+GGG + tig0021332:84832-84851 Msa1390210:CDS 35.0%
!! TGGCTTTGAAAATGAAGACT+GGG + tig0021332:84896-84915 Msa1390210:CDS 35.0%
GAATGCATTTATGCTGTTCT+TGG + tig0021332:84945-84964 Msa1390210:CDS 35.0%
ATGCATTTATGCTGTTCTTG+GGG + tig0021332:84947-84966 Msa1390210:CDS 35.0%
TGCTTGGATAGTTATCACTT+AGG - tig0021332:84995-85014 None:intergenic 35.0%
TGATAACTATCCAAGCATAC+CGG + tig0021332:84998-85017 Msa1390210:CDS 35.0%
! TGAGCTTAGATAAAAGCACA+GGG - tig0021332:85034-85053 None:intergenic 35.0%
! ATGAGCTTAGATAAAAGCAC+AGG - tig0021332:85035-85054 None:intergenic 35.0%
TATCAGAAAATATGCACAGG+TGG + tig0021332:85075-85094 Msa1390210:intron 35.0%
! TAAAATGTTTTTCACCTGCC+AGG + tig0021332:85153-85172 Msa1390210:intron 35.0%
TTCACGATTTATGTTGCAGA+TGG + tig0021332:85473-85492 Msa1390210:CDS 35.0%
GCAATACTGTCTATAACTTG+TGG - tig0021332:85561-85580 None:intergenic 35.0%
ACAAACTTCATGTTTGTGGA+TGG - tig0021332:85644-85663 None:intergenic 35.0%
GTGCCTTTGAATATCAAGTT+AGG - tig0021332:85697-85716 None:intergenic 35.0%
ACCTTCACCTTAATATGGAT+TGG + tig0021332:85719-85738 Msa1390210:intron 35.0%
ACCAATCCATATTAAGGTGA+AGG - tig0021332:85723-85742 None:intergenic 35.0%
CCAAGTACCAATCCATATTA+AGG - tig0021332:85729-85748 None:intergenic 35.0%
!! CCTTAATATGGATTGGTACT+TGG + tig0021332:85726-85745 Msa1390210:intron 35.0%
!! AATATGGATTGGTACTTGGT+AGG + tig0021332:85730-85749 Msa1390210:intron 35.0%
TTCTGTGCTAAAATGTGTAC+AGG - tig0021332:86094-86113 None:intergenic 35.0%
CATTGCATAAAATGGAACCT+AGG + tig0021332:86185-86204 Msa1390210:intron 35.0%
CTAAATTAGCCCATCCAAAT+TGG + tig0021332:86329-86348 Msa1390210:intron 35.0%
CGTAAGTAACTTAACCCATT+TGG - tig0021332:86430-86449 None:intergenic 35.0%
ATTTCTTGCAGCATACGAAA+AGG - tig0021332:86634-86653 None:intergenic 35.0%
TTTCGTATGCTGCAAGAAAT+TGG + tig0021332:86634-86653 Msa1390210:intron 35.0%
! ATTGCGTACTTGTTGAAGTT+TGG + tig0021332:86713-86732 Msa1390210:intron 35.0%
CTTTCTCTTCACTGTATAAC+GGG - tig0021332:86812-86831 None:intergenic 35.0%
! CATTTTCGGTTATCAGAACA+AGG + tig0021332:87014-87033 Msa1390210:CDS 35.0%
AAGGGCCCATAAAAATTATG+AGG + tig0021332:87033-87052 Msa1390210:CDS 35.0%
TGAATGTGTATCTTCAGAGA+AGG + tig0021332:87076-87095 Msa1390210:CDS 35.0%
TCATGAAAGAAAGCCTGAAA+AGG - tig0021332:87366-87385 None:intergenic 35.0%
AGATAAATGTTAGCCGTAAG+AGG - tig0021332:87537-87556 None:intergenic 35.0%
AGCTAACGTGGTATATGTAA+TGG + tig0021332:87917-87936 Msa1390210:three_prime_UTR 35.0%
! AACTTGCTCTCAATACCAAA+TGG - tig0021332:88136-88155 None:intergenic 35.0%
TTCATCTTCGCCGTTAACAA+TGG + tig0021332:78180-78199 Msa1390210:exon 40.0%
! TCGGTGTCTTCCATTGTTAA+CGG - tig0021332:78193-78212 None:intergenic 40.0%
! AGATAAGCGATTTTCGTGGT+CGG - tig0021332:78218-78237 None:intergenic 40.0%
! GAGAGAGTTCTTTGAGTTTG+CGG - tig0021332:78294-78313 None:intergenic 40.0%
! AATGGGAAGTGGATTTGGAT+CGG - tig0021332:78321-78340 None:intergenic 40.0%
! ATGAGAATGGGAAGTGGATT+TGG - tig0021332:78326-78345 None:intergenic 40.0%
GAAGAAATGAGAATGGGAAG+TGG - tig0021332:78332-78351 None:intergenic 40.0%
AGCGGAGAAGAAATGAGAAT+GGG - tig0021332:78338-78357 None:intergenic 40.0%
AAGCGGAGAAGAAATGAGAA+TGG - tig0021332:78339-78358 None:intergenic 40.0%
GAAGAGAGGAATTAGGGATT+TGG - tig0021332:78365-78384 None:intergenic 40.0%
GGAAGTTGAAGAGAGGAATT+AGG - tig0021332:78372-78391 None:intergenic 40.0%
CAGCAACAAGCAGAAAATGA+AGG - tig0021332:78501-78520 None:intergenic 40.0%
TTTGTAGTTCGTCTTGAACG+TGG - tig0021332:78736-78755 None:intergenic 40.0%
TGTGGAAAATAGGCTTAGGT+AGG + tig0021332:79039-79058 Msa1390210:intron 40.0%
GTACATCTGTAGCATGAAGA+CGG + tig0021332:79089-79108 Msa1390210:intron 40.0%
CGAGGTGATAGAATGTATGA+AGG + tig0021332:79403-79422 Msa1390210:intron 40.0%
! TGGTTCGTACTTTTGCAGTT+AGG + tig0021332:79450-79469 Msa1390210:CDS 40.0%
! GGTTCGTACTTTTGCAGTTA+GGG + tig0021332:79451-79470 Msa1390210:CDS 40.0%
AATGCGGTGAGTATTCCAAT+TGG + tig0021332:79551-79570 Msa1390210:intron 40.0%
AGCACAACTGATACAAGCAT+GGG - tig0021332:79606-79625 None:intergenic 40.0%
! ATGCAATAGGGTTTTGCGTA+AGG - tig0021332:79897-79916 None:intergenic 40.0%
!! TGTTTTTGATTAGCGGCTGA+TGG + tig0021332:79919-79938 Msa1390210:intron 40.0%
AAGCACAAACAGAAACAGAG+GGG - tig0021332:80061-80080 None:intergenic 40.0%
! TGCAAAAAGAACCTCTGGAA+AGG - tig0021332:80187-80206 None:intergenic 40.0%
AAGGTTGCAAAAAGAACCTC+TGG - tig0021332:80192-80211 None:intergenic 40.0%
! TTCTTTTTGCAACCTTCCAG+TGG + tig0021332:80196-80215 Msa1390210:intron 40.0%
AAAGTGATAGAAAAGGCCAC+TGG - tig0021332:80215-80234 None:intergenic 40.0%
TTTGGACTCCATCATCATAC+TGG + tig0021332:80234-80253 Msa1390210:intron 40.0%
CCTGAAACACTATAGTGGTA+TGG - tig0021332:80512-80531 None:intergenic 40.0%
CCATACCACTATAGTGTTTC+AGG + tig0021332:80509-80528 Msa1390210:intron 40.0%
TTGGAATTGGAAGATCTGCA+TGG + tig0021332:80646-80665 Msa1390210:intron 40.0%
AACAGATTCACTCACATCCA+AGG - tig0021332:80831-80850 None:intergenic 40.0%
AGCTTAAGGTAAATGTGGTC+TGG + tig0021332:80896-80915 Msa1390210:intron 40.0%
!!! TCCGTTGATTTTCCCATTAC+TGG + tig0021332:81063-81082 Msa1390210:intron 40.0%
! CTTAGAAGAGGTATAGGCAA+GGG - tig0021332:81181-81200 None:intergenic 40.0%
! TCTTAGAAGAGGTATAGGCA+AGG - tig0021332:81182-81201 None:intergenic 40.0%
AAAAGGACCGGCAAAACAAT+AGG - tig0021332:81335-81354 None:intergenic 40.0%
AGCTCAGGACCATAATTCTT+CGG + tig0021332:81423-81442 Msa1390210:CDS 40.0%
AAGTCCTCTCCGAAGAATTA+TGG - tig0021332:81435-81454 None:intergenic 40.0%
!! AGACTCGCTTACTGATTCAT+AGG - tig0021332:81573-81592 None:intergenic 40.0%
CGTTTGATGTTATATGCTGC+TGG - tig0021332:81652-81671 None:intergenic 40.0%
CGTGAGAAGATTTATGGAAC+TGG + tig0021332:82208-82227 Msa1390210:intron 40.0%
TAACAGGTAAGTTGTCATCC+TGG - tig0021332:82288-82307 None:intergenic 40.0%
! GTGCCCATATTTCTGCTATT+TGG - tig0021332:82576-82595 None:intergenic 40.0%
AACATGATTAACGCGAGTGT+TGG - tig0021332:82713-82732 None:intergenic 40.0%
! TTATGATTTGTGCCCCAATC+AGG + tig0021332:82946-82965 Msa1390210:intron 40.0%
ATATACTTCTGCTTCGGTAC+CGG - tig0021332:82998-83017 None:intergenic 40.0%
TGCAGCATATACTTCTGCTT+CGG - tig0021332:83004-83023 None:intergenic 40.0%
AGCATGATTAACACGAGTGT+TGG - tig0021332:83047-83066 None:intergenic 40.0%
ATATACTTCTGCTTCGGTAC+CGG - tig0021332:82998-83017 None:intergenic 40.0%
TGCAGCATATACTTCTGCTT+CGG - tig0021332:83004-83023 None:intergenic 40.0%
ATGTACTCATCAACTGAAGC+AGG - tig0021332:83406-83425 None:intergenic 40.0%
ATACGTACCAGCAACGATAT+GGG - tig0021332:83443-83462 None:intergenic 40.0%
TATACGTACCAGCAACGATA+TGG - tig0021332:83444-83463 None:intergenic 40.0%
CACCAAGCAAAAGTAGTTGT+CGG - tig0021332:83558-83577 None:intergenic 40.0%
!! AGCACGAGGTTGATAATGAA+GGG + tig0021332:83656-83675 Msa1390210:CDS 40.0%
GAAGGGAATGTTGTTGTCAT+CGG + tig0021332:83673-83692 Msa1390210:CDS 40.0%
AATGTTGTTGTCATCGGAGA+TGG + tig0021332:83679-83698 Msa1390210:CDS 40.0%
! ATCGGAGATGGCTTAAGTTT+TGG + tig0021332:83691-83710 Msa1390210:CDS 40.0%
!! GTTTTGGTGGAGATACTGAT+TGG + tig0021332:83707-83726 Msa1390210:CDS 40.0%
CTCCAATCTTTACTTCTTCC+TGG + tig0021332:83949-83968 Msa1390210:CDS 40.0%
CCAATCTTTACTTCTTCCTG+GGG + tig0021332:83951-83970 Msa1390210:CDS 40.0%
TCGTTGTTCATTTAGCCATG+GGG - tig0021332:84316-84335 None:intergenic 40.0%
GTAAGATGTCTTGGTCTCTT+TGG + tig0021332:84609-84628 Msa1390210:CDS 40.0%
ATTGATCTTGTGATGTGGCA+CGG + tig0021332:84732-84751 Msa1390210:CDS 40.0%
AAAACCCTGTCAACTTCTTG+AGG - tig0021332:84759-84778 None:intergenic 40.0%
TTGTCACAGTTTACTTGGCT+TGG - tig0021332:84795-84814 None:intergenic 40.0%
TCAGAATCAGAGAAGTTCAC+AGG - tig0021332:84831-84850 None:intergenic 40.0%
GTGAACTTCTCTGATTCTGA+AGG + tig0021332:84831-84850 Msa1390210:CDS 40.0%
! GAACTTCTCTGATTCTGAAG+GGG + tig0021332:84833-84852 Msa1390210:CDS 40.0%
!! GTGGCTTTGAAAATGAAGAC+TGG + tig0021332:84895-84914 Msa1390210:CDS 40.0%
ATTTATGCTGTTCTTGGGGA+AGG + tig0021332:84951-84970 Msa1390210:CDS 40.0%
! AGATAAGCATTGCTTCAACC+TGG - tig0021332:85174-85193 None:intergenic 40.0%
!! TGTGATTTGTTGAGAGGCAT+GGG - tig0021332:85214-85233 None:intergenic 40.0%
!! TTGTGATTTGTTGAGAGGCA+TGG - tig0021332:85215-85234 None:intergenic 40.0%
ATGCCTCTCAACAAATCACA+AGG + tig0021332:85214-85233 Msa1390210:CDS 40.0%
!! TTGCCTTGTGATTTGTTGAG+AGG - tig0021332:85220-85239 None:intergenic 40.0%
! TCAATGTGGCCAGGAATTTT+TGG + tig0021332:85393-85412 Msa1390210:CDS 40.0%
!!! CCAGGAATTTTTGGCAATTC+CGG + tig0021332:85402-85421 Msa1390210:CDS 40.0%
!!! CAGGAATTTTTGGCAATTCC+GGG + tig0021332:85403-85422 Msa1390210:CDS 40.0%
!!! AGGAATTTTTGGCAATTCCG+GGG + tig0021332:85404-85423 Msa1390210:CDS 40.0%
! CATCTGAGACACCATAAAAG+GGG - tig0021332:85433-85452 None:intergenic 40.0%
! GCATCTGAGACACCATAAAA+GGG - tig0021332:85434-85453 None:intergenic 40.0%
CACACACCTTCACCTTAATA+TGG + tig0021332:85714-85733 Msa1390210:intron 40.0%
GTAACTTAACCCATTTGGGT+TGG - tig0021332:86425-86444 None:intergenic 40.0%
TTCCCATATGTAACATGCAC+AGG - tig0021332:86660-86679 None:intergenic 40.0%
AAATAGTCTGAACTGGGTGT+TGG + tig0021332:86685-86704 Msa1390210:intron 40.0%
TAATTCTGCTGGATGTCACT+TGG + tig0021332:86759-86778 Msa1390210:intron 40.0%
GAGGAAACTTCTATGTCGTA+TGG + tig0021332:87052-87071 Msa1390210:CDS 40.0%
ATGCTTACATGCCTAGACTT+TGG + tig0021332:87232-87251 Msa1390210:intron 40.0%
CACAACTAGAACCAAAGTCT+AGG - tig0021332:87246-87265 None:intergenic 40.0%
!! CTAGACTTTGGTTCTAGTTG+TGG + tig0021332:87244-87263 Msa1390210:intron 40.0%
!! ACACGAAGTATCACCTTTTC+AGG + tig0021332:87350-87369 Msa1390210:intron 40.0%
! TGTTAGCCGTAAGAGGTTTT+CGG - tig0021332:87530-87549 None:intergenic 40.0%
AGAAGATTCTCAACCTTCTG+TGG + tig0021332:87715-87734 Msa1390210:CDS 40.0%
! TTTACCGTATTAACGGGTGT+AGG - tig0021332:87743-87762 None:intergenic 40.0%
ACACCCGTTAATACGGTAAA+AGG + tig0021332:87743-87762 Msa1390210:CDS 40.0%
! CGACCTTTTACCGTATTAAC+GGG - tig0021332:87749-87768 None:intergenic 40.0%
! GCGACCTTTTACCGTATTAA+CGG - tig0021332:87750-87769 None:intergenic 40.0%
CATTTGCTTGTGCAAGTCAT+AGG + tig0021332:88030-88049 Msa1390210:three_prime_UTR 40.0%
ATTATTACCTGTGACTCCGT+TGG + tig0021332:88110-88129 Msa1390210:three_prime_UTR 40.0%
TCTCAATACCAAATGGCCAA+CGG - tig0021332:88129-88148 None:intergenic 40.0%
GATTCGAACTTCGTCGAAGA+TGG - tig0021332:78254-78273 None:intergenic 45.0%
AGCAGTAAAAGAGGAGACGA+AGG - tig0021332:78428-78447 None:intergenic 45.0%
! TCTCCTCTTTTACTGCTGCT+CGG + tig0021332:78431-78450 Msa1390210:CDS 45.0%
TCGTTACCTCAGATACGATC+TGG - tig0021332:78561-78580 None:intergenic 45.0%
AGATAGATCTGGCTGTAGTG+CGG + tig0021332:78919-78938 Msa1390210:intron 45.0%
GGAAAATAGGCTTAGGTAGG+TGG + tig0021332:79042-79061 Msa1390210:intron 45.0%
GAGGATAGTTGGATCACTAG+AGG + tig0021332:79111-79130 Msa1390210:intron 45.0%
GATAGTTGGATCACTAGAGG+CGG + tig0021332:79114-79133 Msa1390210:intron 45.0%
CTATGTGGAGTTGGCTAGAT+GGG - tig0021332:79241-79260 None:intergenic 45.0%
ACTATGTGGAGTTGGCTAGA+TGG - tig0021332:79242-79261 None:intergenic 45.0%
ATCTAGCCAACTCCACATAG+TGG + tig0021332:79241-79260 Msa1390210:intron 45.0%
TCTAGCCAACTCCACATAGT+GGG + tig0021332:79242-79261 Msa1390210:intron 45.0%
CTTATCCCACTATGTGGAGT+TGG - tig0021332:79250-79269 None:intergenic 45.0%
! CAACTCCACATAGTGGGATA+AGG + tig0021332:79248-79267 Msa1390210:intron 45.0%
TTGCTCACTTCTGCATCATC+CGG - tig0021332:79371-79390 None:intergenic 45.0%
GAGCAATGATTTATGGGACG+AGG + tig0021332:79385-79404 Msa1390210:intron 45.0%
! CTGCAAAAGTACGAACCACA+TGG - tig0021332:79448-79467 None:intergenic 45.0%
!! GCTTCCTTTGGAACAGAATG+CGG + tig0021332:79535-79554 Msa1390210:CDS 45.0%
CACAACTGATACAAGCATGG+GGG - tig0021332:79604-79623 None:intergenic 45.0%
GCACAACTGATACAAGCATG+GGG - tig0021332:79605-79624 None:intergenic 45.0%
CAGCACAACTGATACAAGCA+TGG - tig0021332:79607-79626 None:intergenic 45.0%
GAAGTTCATCTGAGGGTTTG+AGG + tig0021332:79665-79684 Msa1390210:intron 45.0%
! GGGTTTGAGGTCACAGTTAT+TGG + tig0021332:79678-79697 Msa1390210:intron 45.0%
TGATAGAAAAGGCCACTGGA+AGG - tig0021332:80211-80230 None:intergenic 45.0%
CACTCTCTCCAGTATGATGA+TGG - tig0021332:80245-80264 None:intergenic 45.0%
TGGTATGGCGCGTAATGATA+TGG - tig0021332:80497-80516 None:intergenic 45.0%
AGACCCCTGAAACACTATAG+TGG - tig0021332:80517-80536 None:intergenic 45.0%
TCTGCTGCTCTATTCACCAT+TGG + tig0021332:80534-80553 Msa1390210:intron 45.0%
! AGATTCAAGACTCGGTAACC+AGG - tig0021332:80609-80628 None:intergenic 45.0%
! AAACAGGAGCACATGGGTAA+TGG + tig0021332:81011-81030 Msa1390210:intron 45.0%
AGCTTAATGCTGCAGAAACC+AGG - tig0021332:81407-81426 None:intergenic 45.0%
GTTTCTGCAGCATTAAGCTC+AGG + tig0021332:81408-81427 Msa1390210:intron 45.0%
AGGACCATAATTCTTCGGAG+AGG + tig0021332:81428-81447 Msa1390210:CDS 45.0%
ATCAGTAAGCGAGTCTGTCA+TGG + tig0021332:81577-81596 Msa1390210:CDS 45.0%
!! ATGGAGGCACTTCTAAAAGC+TGG + tig0021332:81596-81615 Msa1390210:CDS 45.0%
TATGGAACTGGTCAATCAGG+TGG + tig0021332:82220-82239 Msa1390210:intron 45.0%
TCAATCAGGTGGAGTGATTG+AGG + tig0021332:82231-82250 Msa1390210:intron 45.0%
TCAGGAAACTACATCCAACG+AGG - tig0021332:82262-82281 None:intergenic 45.0%
GATGTAGTTTCCTGAATGCC+AGG + tig0021332:82267-82286 Msa1390210:intron 45.0%
AAGTTGTCATCCTGGCATTC+AGG - tig0021332:82280-82299 None:intergenic 45.0%
AAGCAGAGGCTGCACTTTAT+TGG + tig0021332:82430-82449 Msa1390210:CDS 45.0%
ATCAGAGCCTAAGCCTGATT+GGG - tig0021332:82962-82981 None:intergenic 45.0%
ATCAGAGCCTAAGGCCTATT+GGG - tig0021332:83302-83321 None:intergenic 45.0%
!! TGCCGACAACTACTTTTGCT+TGG + tig0021332:83553-83572 Msa1390210:CDS 45.0%
TCATTATCAACCTCGTGCTC+AGG - tig0021332:83655-83674 None:intergenic 45.0%
!! GAGCACGAGGTTGATAATGA+AGG + tig0021332:83655-83674 Msa1390210:CDS 45.0%
!! GGAGATGGCTTAAGTTTTGG+TGG + tig0021332:83694-83713 Msa1390210:CDS 45.0%
GAACAGCAGATTATGTGCAG+TGG + tig0021332:83836-83855 Msa1390210:CDS 45.0%
CCCCAGGAAGAAGTAAAGAT+TGG - tig0021332:83954-83973 None:intergenic 45.0%
!! CTGCAACAATTTGTTACCCC+AGG - tig0021332:83970-83989 None:intergenic 45.0%
ACAGGCGAAACAATCTCACT+TGG + tig0021332:84569-84588 Msa1390210:intron 45.0%
! TCTTGGTCTCTTTGGGCTTT+TGG + tig0021332:84617-84636 Msa1390210:CDS 45.0%
CAGGGCAAGAATAGTACGAA+GGG - tig0021332:85114-85133 None:intergenic 45.0%
ACAGGGCAAGAATAGTACGA+AGG - tig0021332:85115-85134 None:intergenic 45.0%
TTCCAGCTATGCGTTCAATG+TGG + tig0021332:85379-85398 Msa1390210:CDS 45.0%
CCGGAATTGCCAAAAATTCC+TGG - tig0021332:85405-85424 None:intergenic 45.0%
!!! GGAATTTTTGGCAATTCCGG+GGG + tig0021332:85405-85424 Msa1390210:CDS 45.0%
! CGCATCTGAGACACCATAAA+AGG - tig0021332:85435-85454 None:intergenic 45.0%
GAAGCAGTGAGTGAAAACTC+TGG + tig0021332:85525-85544 Msa1390210:CDS 45.0%
GCTGAAGTTCCATTTGAGTG+TGG + tig0021332:85579-85598 Msa1390210:CDS 45.0%
AGTTCCATTTGAGTGTGGTG+AGG + tig0021332:85584-85603 Msa1390210:CDS 45.0%
TTGTGGATGGCTTACCTCTA+CGG - tig0021332:85631-85650 None:intergenic 45.0%
ATCTCAGGTTCGATTCTCAC+CGG - tig0021332:86357-86376 None:intergenic 45.0%
GCATACGAAAAGGCTTCACT+AGG - tig0021332:86624-86643 None:intergenic 45.0%
TGGCCTGTGCATGTTACATA+TGG + tig0021332:86654-86673 Msa1390210:intron 45.0%
GGCCTGTGCATGTTACATAT+GGG + tig0021332:86655-86674 Msa1390210:intron 45.0%
!! GTTTTCGGGAGGGAAAAGTA+CGG - tig0021332:87515-87534 None:intergenic 45.0%
! GTTAGCCGTAAGAGGTTTTC+GGG - tig0021332:87529-87548 None:intergenic 45.0%
ACTCGACTTCAACCTGGATT+TGG + tig0021332:87592-87611 Msa1390210:CDS 45.0%
!! CAACAGAAGCATCCAAATCC+AGG - tig0021332:87607-87626 None:intergenic 45.0%
GGTTCCTACACCCGTTAATA+CGG + tig0021332:87736-87755 Msa1390210:CDS 45.0%
!! TAAAAACTATATAAAAAAAA+GGG - tig0021332:80419-80438 None:intergenic 5.0%
!! ATAAAAACTATATAAAAAAA+AGG - tig0021332:80420-80439 None:intergenic 5.0%
CGACGTTGGAAGTTGAAGAG+AGG - tig0021332:78379-78398 None:intergenic 50.0%
AGGAGACGAAGGAAACTACG+CGG - tig0021332:78417-78436 None:intergenic 50.0%
GTTCCGAGCAGCAGTAAAAG+AGG - tig0021332:78437-78456 None:intergenic 50.0%
! TCTAACAGTCTTATCGGCGG+CGG - tig0021332:78527-78546 None:intergenic 50.0%
AGCATGCCAGATCGTATCTG+AGG + tig0021332:78552-78571 Msa1390210:CDS 50.0%
CATCTGTAGCATGAAGACGG+AGG + tig0021332:79092-79111 Msa1390210:intron 50.0%
GCATGAAGACGGAGGATAGT+TGG + tig0021332:79100-79119 Msa1390210:intron 50.0%
! CCAAGCCTTATCCCACTATG+TGG - tig0021332:79256-79275 None:intergenic 50.0%
! CCACATAGTGGGATAAGGCT+TGG + tig0021332:79253-79272 Msa1390210:intron 50.0%
GGTACGAGACAAGATCCATG+TGG + tig0021332:79430-79449 Msa1390210:CDS 50.0%
CTCACCGCATTCTGTTCCAA+AGG - tig0021332:79542-79561 None:intergenic 50.0%
GGCTGTAGCGCTACCAATAA+CGG + tig0021332:79940-79959 Msa1390210:intron 50.0%
GATAACTTGAGAGGTTGCGC+TGG - tig0021332:80798-80817 None:intergenic 50.0%
AGTAAGCGAGTCTGTCATGG+AGG + tig0021332:81580-81599 Msa1390210:CDS 50.0%
TCAAACGGTGACACAGCAGA+AGG + tig0021332:81665-81684 Msa1390210:CDS 50.0%
ATGGTAAGCAGCTGCCAATC+AGG - tig0021332:82343-82362 None:intergenic 50.0%
TTTGTGCCCCAATCAGGCTT+AGG + tig0021332:82952-82971 Msa1390210:intron 50.0%
TCAGAGCCTAAGCCTGATTG+GGG - tig0021332:82961-82980 None:intergenic 50.0%
CATCAGAGCCTAAGCCTGAT+TGG - tig0021332:82963-82982 None:intergenic 50.0%
TTTGTGCCCCAATAGGCCTT+AGG + tig0021332:83292-83311 Msa1390210:intron 50.0%
TCAGAGCCTAAGGCCTATTG+GGG - tig0021332:83301-83320 None:intergenic 50.0%
CATCAGAGCCTAAGGCCTAT+TGG - tig0021332:83303-83322 None:intergenic 50.0%
! AGCTGCTAGTGTGTTTCTGC+AGG + tig0021332:83612-83631 Msa1390210:CDS 50.0%
TTATCAACCTCGTGCTCAGG+AGG - tig0021332:83652-83671 None:intergenic 50.0%
TCTGCTGTTCTCTCTCTGCA+AGG - tig0021332:83826-83845 None:intergenic 50.0%
AGTGTCCATGCGCTTTCTTC+AGG + tig0021332:83900-83919 Msa1390210:CDS 50.0%
GTGTCCATGCGCTTTCTTCA+GGG + tig0021332:83901-83920 Msa1390210:CDS 50.0%
! TTTGCCCTGAAGAAAGCGCA+TGG - tig0021332:83908-83927 None:intergenic 50.0%
GTTGCACGAATAGTTCCCCA+TGG + tig0021332:84298-84317 Msa1390210:intron 50.0%
GTGCGGACAATGAAATGCAC+AGG + tig0021332:84551-84570 Msa1390210:intron 50.0%
!! GTCTCTTTGGGCTTTTGGAG+AGG + tig0021332:84622-84641 Msa1390210:CDS 50.0%
ACGGTCCTCAAGAAGTTGAC+AGG + tig0021332:84751-84770 Msa1390210:CDS 50.0%
CGGTCCTCAAGAAGTTGACA+GGG + tig0021332:84752-84771 Msa1390210:CDS 50.0%
TGCAAAGAAGCCGGTATGCT+TGG - tig0021332:85011-85030 None:intergenic 50.0%
! AAGCATTGCTTCAACCTGGC+AGG - tig0021332:85170-85189 None:intergenic 50.0%
TCCATTTGAGTGTGGTGAGG+AGG + tig0021332:85587-85606 Msa1390210:CDS 50.0%
CCATTTGAGTGTGGTGAGGA+GGG + tig0021332:85588-85607 Msa1390210:CDS 50.0%
CATTTGAGTGTGGTGAGGAG+GGG + tig0021332:85589-85608 Msa1390210:CDS 50.0%
TAGCCCATCCAAATTGGCAC+CGG + tig0021332:86335-86354 Msa1390210:intron 50.0%
! TCACCGGTGCCAATTTGGAT+GGG - tig0021332:86341-86360 None:intergenic 50.0%
! GATTCTCACCGGTGCCAATT+TGG - tig0021332:86346-86365 None:intergenic 50.0%
GAATCGAACCTGAGATCTCG+AGG + tig0021332:86361-86380 Msa1390210:intron 50.0%
!! TGGCCTAGTGGTATTGGCTT+GGG - tig0021332:86405-86424 None:intergenic 50.0%
!! TTGGCCTAGTGGTATTGGCT+TGG - tig0021332:86406-86425 None:intergenic 50.0%
!! TTGGGTTGGCCTAGTGGTAT+TGG - tig0021332:86411-86430 None:intergenic 50.0%
TACCACTAGGCCAACCCAAA+TGG + tig0021332:86412-86431 Msa1390210:intron 50.0%
ACCACTAGGCCAACCCAAAT+GGG + tig0021332:86413-86432 Msa1390210:intron 50.0%
AGCTTGCGACCTTAACAGAG+AGG - tig0021332:86926-86945 None:intergenic 50.0%
GAAGAAGACAGCTGCTGAGA+AGG + tig0021332:86953-86972 Msa1390210:CDS 50.0%
TCCCTCCCGAAAACCTCTTA+CGG + tig0021332:87521-87540 Msa1390210:intron 50.0%
ACTGGAACTCGACTTCAACC+TGG + tig0021332:87586-87605 Msa1390210:CDS 50.0%
AGCCACACGTTCAAGGAGAA+GGG + tig0021332:87661-87680 Msa1390210:CDS 50.0%
TACCCTTCTCCTTGAACGTG+TGG - tig0021332:87666-87685 None:intergenic 50.0%
CACGTTCAAGGAGAAGGGTA+AGG + tig0021332:87666-87685 Msa1390210:CDS 50.0%
AAGGAGAAGGGTAAGGATCG+AGG + tig0021332:87673-87692 Msa1390210:CDS 50.0%
GGCAGACGACATCTTGTTCA+TGG - tig0021332:87798-87817 None:intergenic 50.0%
ACGGCGAAGATGAAAGAGCG+TGG - tig0021332:78174-78193 None:intergenic 55.0%
! GCGATTTTCGTGGTCGGTGT+CGG - tig0021332:78212-78231 None:intergenic 55.0%
GACGAAGGAAACTACGCGGT+CGG - tig0021332:78413-78432 None:intergenic 55.0%
AGTTGGATCACTAGAGGCGG+AGG + tig0021332:79117-79136 Msa1390210:intron 55.0%
TTCACGGCAGCAGCCGTTAT+TGG - tig0021332:79956-79975 None:intergenic 55.0%
! AACCTCTGGAAAGGCACGCA+TGG - tig0021332:80178-80197 None:intergenic 55.0%
ACTTGAGAGGTTGCGCTGGA+AGG - tig0021332:80794-80813 None:intergenic 55.0%
CCTTCGAGACACCAGCAGAT+CGG - tig0021332:81463-81482 None:intergenic 55.0%
TGATTGAGGCTGTGCCTCGT+TGG + tig0021332:82245-82264 Msa1390210:intron 55.0%
CGGCATGCAAAGCGATGGTT+TGG - tig0021332:83538-83557 None:intergenic 55.0%
GTTGTCGGCATGCAAAGCGA+TGG - tig0021332:83543-83562 None:intergenic 55.0%
AAGAAAGTCCATGCGGCTCC+TGG + tig0021332:83754-83773 Msa1390210:CDS 55.0%
CAAATTCACCAGGAGCCGCA+TGG - tig0021332:83765-83784 None:intergenic 55.0%
AGCACAGGGTGCAAAGAAGC+CGG - tig0021332:85020-85039 None:intergenic 55.0%
GGCCACATTGAACGCATAGC+TGG - tig0021332:85384-85403 None:intergenic 55.0%
GCTATGCGTTCAATGTGGCC+AGG + tig0021332:85384-85403 Msa1390210:CDS 55.0%
! TTCCGGGGGTTCCCCTTTTA+TGG + tig0021332:85419-85438 Msa1390210:CDS 55.0%
CACCATAAAAGGGGAACCCC+CGG - tig0021332:85424-85443 None:intergenic 55.0%
GTCTCAGATGCGTAAGCGTG+CGG + tig0021332:85443-85462 Msa1390210:CDS 55.0%
CCCTCCTCACCACACTCAAA+TGG - tig0021332:85591-85610 None:intergenic 55.0%
GATGGCTTACCTCTACGGCT+AGG - tig0021332:85626-85645 None:intergenic 55.0%
! CTCACCGGTGCCAATTTGGA+TGG - tig0021332:86342-86361 None:intergenic 55.0%
TCGAACCTGAGATCTCGAGG+AGG + tig0021332:86364-86383 Msa1390210:intron 55.0%
!! GTGGTATTGGCTTGGGACCT+GGG - tig0021332:86398-86417 None:intergenic 55.0%
!! AGTGGTATTGGCTTGGGACC+TGG - tig0021332:86399-86418 None:intergenic 55.0%
GGTCCCAAGCCAATACCACT+AGG + tig0021332:86399-86418 Msa1390210:intron 55.0%
!! ACCCATTTGGGTTGGCCTAG+TGG - tig0021332:86417-86436 None:intergenic 55.0%
!! GCCGTAAGAGGTTTTCGGGA+GGG - tig0021332:87525-87544 None:intergenic 55.0%
!! AGCCGTAAGAGGTTTTCGGG+AGG - tig0021332:87526-87545 None:intergenic 55.0%
GGCTGTACAGCTGGTGTTTG+TGG - tig0021332:87635-87654 None:intergenic 55.0%
CTTGAACGTGTGGCTCTCGT+TGG - tig0021332:87656-87675 None:intergenic 55.0%
CAACGAGAGCCACACGTTCA+AGG + tig0021332:87654-87673 Msa1390210:CDS 55.0%
GAGCCACACGTTCAAGGAGA+AGG + tig0021332:87660-87679 Msa1390210:CDS 55.0%
ACGGGTGTAGGAACCACAGA+AGG - tig0021332:87731-87750 None:intergenic 55.0%
CAAATGGCCAACGGAGTCAC+AGG - tig0021332:88120-88139 None:intergenic 55.0%
CTGTGACTCCGTTGGCCATT+TGG + tig0021332:88118-88137 Msa1390210:three_prime_UTR 55.0%
GAAGGAAACTACGCGGTCGG+CGG - tig0021332:78410-78429 None:intergenic 60.0%
CACCATGCGTGCCTTTCCAG+AGG + tig0021332:80173-80192 Msa1390210:intron 60.0%
TGAGAGGTTGCGCTGGAAGG+AGG - tig0021332:80791-80810 None:intergenic 60.0%
!! GGACTTGCTGACCGATCTGC+TGG + tig0021332:81449-81468 Msa1390210:CDS 60.0%
CCGATCTGCTGGTGTCTCGA+AGG + tig0021332:81460-81479 Msa1390210:CDS 60.0%
TCTGATGCTGCAGCCACAGC+CGG + tig0021332:82976-82995 Msa1390210:intron 60.0%
!! TTCTGCTTCGGTACCGGCTG+TGG - tig0021332:82992-83011 None:intergenic 60.0%
GGCTGCAGCATCAGAGCCTA+AGG - tig0021332:82971-82990 None:intergenic 60.0%
TCTGATGCTGCAGCCACAGC+CGG + tig0021332:82976-82995 Msa1390210:intron 60.0%
!! TTCTGCTTCGGTACCGGCTG+TGG - tig0021332:82992-83011 None:intergenic 60.0%
GTGCTCCTCCTCGAGATCTC+AGG - tig0021332:86372-86391 None:intergenic 60.0%
! GCTCTCGTTGGCTGTACAGC+TGG - tig0021332:87644-87663 None:intergenic 60.0%
GAGCAAGCCTCCTGAGCACG+AGG + tig0021332:83642-83661 Msa1390210:CDS 65.0%
CGCACTACGCCTAGCCGTAG+AGG + tig0021332:85614-85633 Msa1390210:CDS 65.0%
! TCGAGGAGGAGCACACTCCC+AGG + tig0021332:86378-86397 Msa1390210:intron 65.0%
CGGCGGAAGCGAGACGACGT+TGG - tig0021332:78393-78412 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0021332 gene 78134 88214 78134 ID=Msa1390210;Name=Msa1390210
tig0021332 mRNA 78134 88214 78134 ID=Msa1390210-mRNA-1;Parent=Msa1390210;Name=Msa1390210-mRNA-1;_AED=0.07;_eAED=0.07;_QI=65|0.81|0.83|1|1|1|12|304|1024
tig0021332 exon 78134 78573 78134 ID=Msa1390210-mRNA-1:exon:12028;Parent=Msa1390210-mRNA-1
tig0021332 exon 79425 79556 79425 ID=Msa1390210-mRNA-1:exon:12029;Parent=Msa1390210-mRNA-1
tig0021332 exon 80758 80903 80758 ID=Msa1390210-mRNA-1:exon:12030;Parent=Msa1390210-mRNA-1
tig0021332 exon 81418 81686 81418 ID=Msa1390210-mRNA-1:exon:12031;Parent=Msa1390210-mRNA-1
tig0021332 exon 82391 82488 82391 ID=Msa1390210-mRNA-1:exon:12032;Parent=Msa1390210-mRNA-1
tig0021332 exon 83307 83454 83307 ID=Msa1390210-mRNA-1:exon:12033;Parent=Msa1390210-mRNA-1
tig0021332 exon 83533 83972 83533 ID=Msa1390210-mRNA-1:exon:12034;Parent=Msa1390210-mRNA-1
tig0021332 exon 84573 85093 84573 ID=Msa1390210-mRNA-1:exon:12035;Parent=Msa1390210-mRNA-1
tig0021332 exon 85175 85250 85175 ID=Msa1390210-mRNA-1:exon:12036;Parent=Msa1390210-mRNA-1
tig0021332 exon 85357 85635 85357 ID=Msa1390210-mRNA-1:exon:12037;Parent=Msa1390210-mRNA-1
tig0021332 exon 86936 87197 86936 ID=Msa1390210-mRNA-1:exon:12038;Parent=Msa1390210-mRNA-1
tig0021332 exon 87582 88214 87582 ID=Msa1390210-mRNA-1:exon:12039;Parent=Msa1390210-mRNA-1
tig0021332 five_prime_UTR 78134 78198 78134 ID=Msa1390210-mRNA-1:five_prime_utr;Parent=Msa1390210-mRNA-1
tig0021332 CDS 78199 78573 78199 ID=Msa1390210-mRNA-1:cds;Parent=Msa1390210-mRNA-1
tig0021332 CDS 79425 79556 79425 ID=Msa1390210-mRNA-1:cds;Parent=Msa1390210-mRNA-1
tig0021332 CDS 80758 80903 80758 ID=Msa1390210-mRNA-1:cds;Parent=Msa1390210-mRNA-1
tig0021332 CDS 81418 81686 81418 ID=Msa1390210-mRNA-1:cds;Parent=Msa1390210-mRNA-1
tig0021332 CDS 82391 82488 82391 ID=Msa1390210-mRNA-1:cds;Parent=Msa1390210-mRNA-1
tig0021332 CDS 83307 83454 83307 ID=Msa1390210-mRNA-1:cds;Parent=Msa1390210-mRNA-1
tig0021332 CDS 83533 83972 83533 ID=Msa1390210-mRNA-1:cds;Parent=Msa1390210-mRNA-1
tig0021332 CDS 84573 85093 84573 ID=Msa1390210-mRNA-1:cds;Parent=Msa1390210-mRNA-1
tig0021332 CDS 85175 85250 85175 ID=Msa1390210-mRNA-1:cds;Parent=Msa1390210-mRNA-1
tig0021332 CDS 85357 85635 85357 ID=Msa1390210-mRNA-1:cds;Parent=Msa1390210-mRNA-1
tig0021332 CDS 86936 87197 86936 ID=Msa1390210-mRNA-1:cds;Parent=Msa1390210-mRNA-1
tig0021332 CDS 87582 87910 87582 ID=Msa1390210-mRNA-1:cds;Parent=Msa1390210-mRNA-1
tig0021332 three_prime_UTR 87911 88214 87911 ID=Msa1390210-mRNA-1:three_prime_utr;Parent=Msa1390210-mRNA-1
Gene Sequence

>Msa1390210

ATGGAAGACACCGACACCGACCACGAAAATCGCTTATCTCAAAAAATCGCTTCCATCTTCGACGAAGTTCGAATCTCATACGCAACACACAACCGCAAACTCAAAGAACTCTCTCTTCTCCGATCCAAATCCACTTCCCATTCTCATTTCTTCTCCGCTTTCTCCAAATCCCTAATTCCTCTCTTCAACTTCCAACGTCGTCTCGCTTCCGCCGACCGCGTAGTTTCCTTCGTCTCCTCTTTTACTGCTGCTCGGAACTCTGCAGATGCTGAAGTTTGCGATGAGTTTCTCGATCATTTCCTTCATTTTCTGCTTGTTGCTGCGACCGCCGCCGATAAGACTGTTAGATTTAGAGCATGCCAGATCGTATCTGAGGTTAGGGTACGAGACAAGATCCATGTGGTTCGTACTTTTGCAGTTAGGGCGCTTGCGCGTTTTGTGAACGACTCTTCCAACGTTGACATCCTTGATTTATTTCTTGAGATGCTTCCTTTGGAACAGAATGCGGACGTTCGTAAGATGATTGTGTTGTCATTGCCTCCTTCCAGCGCAACCTCTCAAGTTATCATTGACTGTACCTTGGATGTGAGTGAATCTGTTCGCAAAGCAGCATACTGTGTTCTAGCTAATAAATTTCCTCTTCAAAGCTTAAGCATTAAGCTCAGGACCATAATTCTTCGGAGAGGACTTGCTGACCGATCTGCTGGTGTCTCGAAGGAATGTTTTAAATTATTGAAAGATGAATGGCTTATAAAGTGCTGTAATGGTGATCCTTTAGAACTTTTGAAGTATCTAGATGTTGAAACCTATGAATCAGTAAGCGAGTCTGTCATGGAGGCACTTCTAAAAGCTGGTTTAGTAAAGCTAAAGAATGGTGCAAGTATCCAGCAGCATATAACATCAAACGGTGACACAGCAGAAGGGGAAGGGGTTCATTGTCCACCAAGCATTATATTGATGGAAGCAGAGGCTGCACTTTATTGGAGAACTGTTTGCAAACATTTGCAGTCGGAAGCACATGCCTTAGGCTCTGATGCTGCAGCCACAGCCGGTACCGAAGCAGAAGTATATGCTGCAGAAGCATCAGATAAAAATGACCTTCTAGAAAAAATTCTTCCTGCTTCAGTTGATGAGTACATAGAGTTGGTCAGAGCCCATATCGTTGCTGGACCAAACCATCGCTTTGCATGCCGACAACTACTTTTGCTTGGTGCTATGTTTGATTTTTCAGACACTTCATATAGAAAAGCTGCTAGTGTGTTTCTGCAGGAGCTGATGAGCAAGCCTCCTGAGCACGAGGTTGATAATGAAGGGAATGTTGTTGTCATCGGAGATGGCTTAAGTTTTGGTGGAGATACTGATTGGGCAGAAGCCATAGCCAAATTAGCAAAGAAAGTCCATGCGGCTCCTGGTGAATTTGAAGAAATTGTTCTTGCAATCATAGAAAAGCTAGCTCAACCTTGCAGAGAGAGAACAGCAGATTATGTGCAGTGGATACACACCCTTTCTCTTATTGGCCTTTTACTGAAAAATGCAGTGTCCATGCGCTTTCTTCAGGGCAAAGCTATAGAACCTGAAGAACTACTCCAATCTTTACTTCTTCCTGGGGCGAAACAATCTCACTTGGACGTGCAAAGAATTGCTGTAAGATGTCTTGGTCTCTTTGGGCTTTTGGAGAGGAAACCAAATGCTGAACTTTTGAAACAGCTAAGGACTTCATACATTAAGGGGCCACATTTAATTAGTATAGAGGCTGGTAAAGCATTAATTGATCTTGTGATGTGGCACGGTCCTCAAGAAGTTGACAGGGTTTTAAGTCACGATATTCCAAGCCAAGTAAACTGTGACAAGAAATGTTTTGTTCCTGTGAACTTCTCTGATTCTGAAGGGGATTCAAACTCAAATGTTGACATTCTTGATCTTTTATACGGTGGCTTTGAAAATGAAGACTGGGCTAATCCTTTAACTAGCAATGAAGATGAATGCATTTATGCTGTTCTTGGGGAAGGCTTTGCGAAAATTCTTCTCCTAAGTGATAACTATCCAAGCATACCGGCTTCTTTGCACCCTGTGCTTTTATCTAAGCTCATTTACTTGTACTTCAGTGATGTATCAGAAAATATGCACAGGTTGAAGCAATGCTTATCTGTTTTCTTTGAGCACTACCCATGCCTCTCAACAAATCACAAGGCAAGCATTATTGATAGGTGTATATTGAAGGCTTTTATTCCAGCTATGCGTTCAATGTGGCCAGGAATTTTTGGCAATTCCGGGGGTTCCCCTTTTATGGTGTCTCAGATGCGTAAGCGTGCGGTTCAAGCTTCACGATTTATGTTGCAGATGGTTCAGATTCCATTATTCGTTAAAGAGACTGAAGCAGTGAGTGAAAACTCTGGTACTGAACATCCACAAGTTATAGACAGTATTGCTGAAGTTCCATTTGAGTGTGGTGAGGAGGGGCTCGCACTACGCCTAGCCGTAGAGGTCGCAAGCTTTCACTCGAAGAAGACAGCTGCTGAGAAGGCATATGTATCTGCATTATGCAAAATACTTGTCTCACTTCATTTTCGGTTATCAGAACAAGGGCCCATAAAAATTATGAGGAAACTTCTATGTCGTATGGCTGAATGTGTATCTTCAGAGAAGGATCTTGTTAAAGAATTGAAACGCATGGCCGATCATCTAATGACAATTGACAGGCAACAAGATCAAGAATTGTTGCAAGAAGAAGTTAATCTCATTTTGGGAAAACTGGAACTCGACTTCAACCTGGATTTGGATGCTTCTGTTGCAATGCCACAAACACCAGCTGTACAGCCAACGAGAGCCACACGTTCAAGGAGAAGGGTAAGGATCGAGGAAGATAGTTCTGATGATGAAGAAGATTCTCAACCTTCTGTGGTTCCTACACCCGTTAATACGGTAAAAGGTCGCTCACAGAGAGCAAGCAAAACTGCAGCCATGAACAAGATGTCGTCTGCCATTAGATCACCCATAATTGATGAATTTGAAGAGGAAGAAGAAGCGTCGAACTTGACATCTGATGATTCTGAAGAATCCAACCAGTCTAGTTAA

Protein sequence

>Msa1390210

MEDTDTDHENRLSQKIASIFDEVRISYATHNRKLKELSLLRSKSTSHSHFFSAFSKSLIPLFNFQRRLASADRVVSFVSSFTAARNSADAEVCDEFLDHFLHFLLVAATAADKTVRFRACQIVSEVRVRDKIHVVRTFAVRALARFVNDSSNVDILDLFLEMLPLEQNADVRKMIVLSLPPSSATSQVIIDCTLDVSESVRKAAYCVLANKFPLQSLSIKLRTIILRRGLADRSAGVSKECFKLLKDEWLIKCCNGDPLELLKYLDVETYESVSESVMEALLKAGLVKLKNGASIQQHITSNGDTAEGEGVHCPPSIILMEAEAALYWRTVCKHLQSEAHALGSDAAATAGTEAEVYAAEASDKNDLLEKILPASVDEYIELVRAHIVAGPNHRFACRQLLLLGAMFDFSDTSYRKAASVFLQELMSKPPEHEVDNEGNVVVIGDGLSFGGDTDWAEAIAKLAKKVHAAPGEFEEIVLAIIEKLAQPCRERTADYVQWIHTLSLIGLLLKNAVSMRFLQGKAIEPEELLQSLLLPGAKQSHLDVQRIAVRCLGLFGLLERKPNAELLKQLRTSYIKGPHLISIEAGKALIDLVMWHGPQEVDRVLSHDIPSQVNCDKKCFVPVNFSDSEGDSNSNVDILDLLYGGFENEDWANPLTSNEDECIYAVLGEGFAKILLLSDNYPSIPASLHPVLLSKLIYLYFSDVSENMHRLKQCLSVFFEHYPCLSTNHKASIIDRCILKAFIPAMRSMWPGIFGNSGGSPFMVSQMRKRAVQASRFMLQMVQIPLFVKETEAVSENSGTEHPQVIDSIAEVPFECGEEGLALRLAVEVASFHSKKTAAEKAYVSALCKILVSLHFRLSEQGPIKIMRKLLCRMAECVSSEKDLVKELKRMADHLMTIDRQQDQELLQEEVNLILGKLELDFNLDLDASVAMPQTPAVQPTRATRSRRRVRIEEDSSDDEEDSQPSVVPTPVNTVKGRSQRASKTAAMNKMSSAIRSPIIDEFEEEEEASNLTSDDSEESNQSS*