Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0396140 | XP_003598516.1 | 93.787 | 338 | 12 | 3 | 1 | 338 | 1 | 329 | 0.0 | 574 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0396140 | sp|Q94CK9|LRP1_ARATH | 41.349 | 341 | 159 | 12 | 1 | 333 | 1 | 308 | 4.95e-57 | 190 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0396140 | G7J0K6 | 93.787 | 338 | 12 | 3 | 1 | 338 | 1 | 329 | 0.0 | 574 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0396140 | TF | SRS |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001940 | Msa0396140 | 0.802546 | 5.328796e-49 | -8.615850e-47 |
| Msa0017950 | Msa0396140 | 0.803135 | 4.028175e-49 | -8.615850e-47 |
| Msa0396140 | Msa0519750 | 0.819259 | 1.275629e-52 | -8.615850e-47 |
| Msa0396140 | Msa0519820 | 0.804147 | 2.484165e-49 | -8.615850e-47 |
| Msa0396140 | Msa0519830 | 0.801345 | 9.409847e-49 | -8.615850e-47 |
| Msa0396140 | Msa0581470 | 0.808062 | 3.724528e-50 | -8.615850e-47 |
| Msa0396140 | Msa0826950 | 0.828271 | 9.862678e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0396140 | MtrunA17_Chr3g0082511 | 93.787 | 338 | 12 | 3 | 1 | 338 | 1 | 329 | 0.0 | 574 |
| Msa0396140 | MtrunA17_Chr8g0353111 | 59.143 | 350 | 106 | 14 | 1 | 337 | 1 | 326 | 1.44e-118 | 345 |
| Msa0396140 | MtrunA17_Chr5g0441921 | 41.155 | 277 | 138 | 5 | 45 | 310 | 29 | 291 | 5.41e-56 | 185 |
| Msa0396140 | MtrunA17_Chr8g0372461 | 41.250 | 160 | 63 | 5 | 137 | 295 | 121 | 250 | 2.66e-32 | 123 |
| Msa0396140 | MtrunA17_Chr1g0155791 | 39.881 | 168 | 86 | 3 | 137 | 303 | 122 | 275 | 9.19e-31 | 119 |
| Msa0396140 | MtrunA17_Chr5g0404781 | 42.073 | 164 | 82 | 3 | 137 | 297 | 100 | 253 | 2.84e-30 | 117 |
| Msa0396140 | MtrunA17_Chr3g0142171 | 39.506 | 162 | 74 | 6 | 137 | 295 | 86 | 226 | 3.86e-27 | 108 |
| Msa0396140 | MtrunA17_Chr4g0035591 | 34.783 | 161 | 67 | 4 | 137 | 297 | 20 | 142 | 1.37e-22 | 94.0 |
| Msa0396140 | MtrunA17_Chr0c01g0489181 | 57.143 | 35 | 15 | 0 | 137 | 171 | 67 | 101 | 6.03e-12 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0396140 | AT5G12330.1 | 41.349 | 341 | 159 | 12 | 1 | 333 | 1 | 308 | 5.03e-58 | 190 |
| Msa0396140 | AT5G12330.2 | 41.349 | 341 | 159 | 12 | 1 | 333 | 1 | 308 | 5.03e-58 | 190 |
| Msa0396140 | AT5G12330.4 | 41.349 | 341 | 159 | 12 | 1 | 333 | 88 | 395 | 1.65e-57 | 191 |
| Msa0396140 | AT3G54430.1 | 44.565 | 184 | 69 | 4 | 125 | 307 | 31 | 182 | 8.01e-43 | 147 |
| Msa0396140 | AT5G66350.3 | 42.500 | 160 | 72 | 3 | 137 | 295 | 120 | 260 | 3.82e-34 | 128 |
| Msa0396140 | AT5G66350.2 | 42.500 | 160 | 72 | 3 | 137 | 295 | 120 | 260 | 4.98e-34 | 128 |
| Msa0396140 | AT5G66350.1 | 42.500 | 160 | 72 | 3 | 137 | 295 | 120 | 260 | 5.76e-34 | 127 |
| Msa0396140 | AT3G51060.1 | 41.772 | 158 | 72 | 4 | 137 | 293 | 144 | 282 | 5.92e-34 | 128 |
| Msa0396140 | AT1G75520.1 | 39.264 | 163 | 90 | 4 | 137 | 295 | 125 | 282 | 4.86e-32 | 123 |
| Msa0396140 | AT1G19790.2 | 36.612 | 183 | 60 | 3 | 137 | 295 | 119 | 269 | 1.18e-31 | 122 |
| Msa0396140 | AT1G19790.1 | 36.612 | 183 | 60 | 3 | 137 | 295 | 119 | 269 | 1.18e-31 | 122 |
| Msa0396140 | AT4G36260.1 | 32.479 | 234 | 129 | 6 | 76 | 295 | 26 | 244 | 7.27e-30 | 116 |
| Msa0396140 | AT2G21400.2 | 36.420 | 162 | 74 | 3 | 135 | 296 | 8 | 140 | 5.21e-29 | 110 |
| Msa0396140 | AT2G21400.4 | 36.420 | 162 | 74 | 3 | 135 | 296 | 7 | 139 | 5.69e-29 | 110 |
| Msa0396140 | AT2G21400.3 | 37.037 | 162 | 58 | 3 | 135 | 296 | 8 | 125 | 9.90e-28 | 107 |
| Msa0396140 | AT2G21400.1 | 37.037 | 162 | 58 | 3 | 135 | 296 | 7 | 124 | 1.12e-27 | 107 |
| Msa0396140 | AT2G18120.2 | 36.196 | 163 | 76 | 1 | 137 | 299 | 72 | 206 | 1.58e-27 | 107 |
| Msa0396140 | AT2G18120.1 | 36.747 | 166 | 73 | 2 | 137 | 299 | 72 | 208 | 3.12e-27 | 107 |
| Msa0396140 | AT5G12330.3 | 37.652 | 247 | 115 | 10 | 1 | 241 | 1 | 214 | 2.18e-26 | 105 |
| Msa0396140 | AT5G33210.2 | 65.306 | 49 | 17 | 0 | 137 | 185 | 17 | 65 | 1.78e-18 | 80.1 |
| Msa0396140 | AT5G33210.1 | 50.617 | 81 | 39 | 1 | 106 | 185 | 20 | 100 | 1.15e-17 | 79.7 |
Find 101 sgRNAs with CRISPR-Local
Find 392 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGTGTATGTCTATATAAA+TGG | 0.189456 | 3_2:-13959448 | Msa0396140:three_prime_UTR |
| AAGTCTGCATGTAAGCAATT+AGG | 0.207329 | 3_2:+13959589 | None:intergenic |
| TGAAGATGAGTTTGCCTATT+TGG | 0.237838 | 3_2:-13963573 | Msa0396140:CDS |
| TACACAATTAAAGTGGAATA+TGG | 0.245388 | 3_2:+13959629 | None:intergenic |
| CATGCAGACTTAAAGATTAA+TGG | 0.267818 | 3_2:-13959577 | Msa0396140:three_prime_UTR |
| AAAATTTCTTGCACTAGATT+AGG | 0.276224 | 3_2:-13959545 | Msa0396140:three_prime_UTR |
| TCTGGTGTTAAGAGACAAAA+AGG | 0.305575 | 3_2:-13964670 | Msa0396140:CDS |
| TCTTTGCTGGTTCATGAAAC+TGG | 0.307985 | 3_2:+13959690 | None:intergenic |
| AGCCATGAAGATTGCTTATC+AGG | 0.309787 | 3_2:-13963367 | Msa0396140:intron |
| AGTCTGCATGTAAGCAATTA+GGG | 0.317542 | 3_2:+13959590 | None:intergenic |
| AATATGAACTGTGGCCAAAT+AGG | 0.325865 | 3_2:+13963559 | None:intergenic |
| TTTGGAAGATTCACTACTTC+AGG | 0.330560 | 3_2:+13964979 | None:intergenic |
| GCTTCCTTAAGTGTTGGTTT+TGG | 0.330750 | 3_2:-13965123 | Msa0396140:CDS |
| GCAGGGTAAGCATTATTGTT+TGG | 0.337600 | 3_2:+13963401 | None:intergenic |
| CTTGTTCCAATGAGTATGTT+AGG | 0.338078 | 3_2:-13965282 | Msa0396140:exon |
| AAATTTCTTGCACTAGATTA+GGG | 0.338911 | 3_2:-13959544 | Msa0396140:three_prime_UTR |
| ATAAAACGTCCATTCTTTGC+TGG | 0.349849 | 3_2:+13959677 | None:intergenic |
| TTGTGTATGTCTATATAAAT+GGG | 0.352807 | 3_2:-13959447 | Msa0396140:three_prime_UTR |
| CTCTATGATCATGGTGTTGA+TGG | 0.354571 | 3_2:-13963512 | Msa0396140:CDS |
| CATGTGAAATGGGTTGGTTT+TGG | 0.355416 | 3_2:+13965178 | None:intergenic |
| GGTGATGGTGAAGGTTGTTC+TGG | 0.358144 | 3_2:-13964688 | Msa0396140:CDS |
| TTGTTGTTACTATTATTGTT+AGG | 0.359102 | 3_2:+13965024 | None:intergenic |
| TGTGTCAAGATTGTGGTAAT+AGG | 0.363534 | 3_2:-13964867 | Msa0396140:CDS |
| GAGCTAGTAGCAAAACTCTT+TGG | 0.380098 | 3_2:+13964583 | None:intergenic |
| CGGGAGGTGGAGATGTTTGC+CGG | 0.390512 | 3_2:-13964733 | Msa0396140:CDS |
| TGAATTGTGATCATGTGAAA+TGG | 0.393792 | 3_2:+13965167 | None:intergenic |
| TCTTGAACTTCATTGGTTTG+AGG | 0.394602 | 3_2:+13965051 | None:intergenic |
| TTGGCCACAGTTCATATTAG+TGG | 0.395130 | 3_2:-13963554 | Msa0396140:CDS |
| TGCCAATAGCAGTTACTCTA+TGG | 0.396555 | 3_2:+13963600 | None:intergenic |
| GTGGAGATGTTTGCCGGTGG+TGG | 0.398827 | 3_2:-13964727 | Msa0396140:CDS |
| GAGATGTTTGCCGGTGGTGG+TGG | 0.399774 | 3_2:-13964724 | Msa0396140:CDS |
| ATGTTTGCCGGTGGTGGTGG+TGG | 0.402912 | 3_2:-13964721 | Msa0396140:CDS |
| TTGTGTTTCAGAACTTCAAT+TGG | 0.409173 | 3_2:-13963474 | Msa0396140:CDS |
| TTCGACACGTCGTCGGGAAC+GGG | 0.417355 | 3_2:-13964752 | Msa0396140:CDS |
| TGCCATAGAGTAACTGCTAT+TGG | 0.423519 | 3_2:-13963602 | Msa0396140:CDS |
| TTTGCCGGTGGTGGTGGTGG+TGG | 0.424345 | 3_2:-13964718 | Msa0396140:CDS |
| GTACTCATTTGAAGAGTACT+TGG | 0.429685 | 3_2:-13964780 | Msa0396140:CDS |
| TTGTTGATTTATATAGAGAA+TGG | 0.432912 | 3_2:+13965370 | None:intergenic |
| GGTGGTGGTGGTGATGGTGA+AGG | 0.434194 | 3_2:-13964697 | Msa0396140:CDS |
| AAGATGTAGGACTTGTTGTA+AGG | 0.436244 | 3_2:-13964821 | Msa0396140:CDS |
| AAAGGGTTTCTCTATGATCA+TGG | 0.441459 | 3_2:-13963521 | Msa0396140:CDS |
| GTGTCAAGATTGTGGTAATA+GGG | 0.442508 | 3_2:-13964866 | Msa0396140:CDS |
| CATGGCTAGCTAGCAGAAGC+AGG | 0.449543 | 3_2:+13963383 | None:intergenic |
| TACCTGATAAGCAATCTTCA+TGG | 0.450585 | 3_2:+13963365 | None:intergenic |
| GAATTGTGATCATGTGAAAT+GGG | 0.453097 | 3_2:+13965168 | None:intergenic |
| GGTTTCAAAGAGGGTTTACC+AGG | 0.457703 | 3_2:-13963653 | Msa0396140:CDS |
| TCTCATAGCTCTAACTCTAA+TGG | 0.458294 | 3_2:-13964613 | Msa0396140:CDS |
| TCATGGCAAGATGGCTATGA+TGG | 0.459692 | 3_2:-13964929 | Msa0396140:CDS |
| GGTGAATGTTCTTCTGCAAT+TGG | 0.459943 | 3_2:-13963428 | Msa0396140:CDS |
| GATTCCTTCGACACGTCGTC+GGG | 0.466088 | 3_2:-13964758 | Msa0396140:CDS |
| ACGTCGTCGGGAACGGGAGG+TGG | 0.470316 | 3_2:-13964746 | Msa0396140:CDS |
| CATGTAAGCAATTAGGGACT+GGG | 0.472361 | 3_2:+13959596 | None:intergenic |
| CTAAGACCTAACATACTCAT+TGG | 0.474174 | 3_2:+13965276 | None:intergenic |
| AGTTCTGAAACACAAGGCAT+TGG | 0.476027 | 3_2:+13963482 | None:intergenic |
| CTTAAAGATTAATGGTCCCT+TGG | 0.481197 | 3_2:-13959569 | Msa0396140:three_prime_UTR |
| ATTTATATAGAGAATGGGAA+TGG | 0.481686 | 3_2:+13965376 | None:intergenic |
| AGTGAAGAAAATGGTGTGTA+TGG | 0.483753 | 3_2:-13964904 | Msa0396140:CDS |
| ATTAATTTACACAATTAAAG+TGG | 0.485072 | 3_2:+13959622 | None:intergenic |
| TGTTGATTTATATAGAGAAT+GGG | 0.490083 | 3_2:+13965371 | None:intergenic |
| TCATCAGCTTCCTTAAGTGT+TGG | 0.492084 | 3_2:-13965129 | Msa0396140:CDS |
| GCATGTAAGCAATTAGGGAC+TGG | 0.495334 | 3_2:+13959595 | None:intergenic |
| TGTGTTTCAGAACTTCAATT+GGG | 0.498389 | 3_2:-13963473 | Msa0396140:CDS |
| CTACTTCAGGACACATCCTA+AGG | 0.507824 | 3_2:+13964992 | None:intergenic |
| TTTCATGAACCAGCAAAGAA+TGG | 0.508151 | 3_2:-13959686 | Msa0396140:three_prime_UTR |
| GTTTGAGGTTGTTGTTGTTG+TGG | 0.509148 | 3_2:+13965066 | None:intergenic |
| CTTCGACACGTCGTCGGGAA+CGG | 0.511061 | 3_2:-13964753 | Msa0396140:CDS |
| AATGCCAAAACCAACACTTA+AGG | 0.514002 | 3_2:+13965119 | None:intergenic |
| TGTTGTTGTTGTGGCATGCA+AGG | 0.524551 | 3_2:+13965075 | None:intergenic |
| TTTATATAGAGAATGGGAAT+GGG | 0.526803 | 3_2:+13965377 | None:intergenic |
| TGTGATCATGTGAAATGGGT+TGG | 0.528257 | 3_2:+13965172 | None:intergenic |
| CTATGGCATCTGAATACAGC+TGG | 0.539353 | 3_2:+13963617 | None:intergenic |
| GTGATGGAGCTATGAGAACT+AGG | 0.539570 | 3_2:+13965250 | None:intergenic |
| ATGATGGAGAGTGAAGAAAA+TGG | 0.542008 | 3_2:-13964913 | Msa0396140:CDS |
| GAGAACAGAACAGAGCACTA+TGG | 0.549118 | 3_2:+13965402 | None:intergenic |
| GGATTCCTTCGACACGTCGT+CGG | 0.554911 | 3_2:-13964759 | Msa0396140:CDS |
| GCAGATGCAGGTTTCAAAGA+GGG | 0.558109 | 3_2:-13963662 | Msa0396140:intron |
| ACACTTAAGGAAGCTGATGA+AGG | 0.561077 | 3_2:+13965132 | None:intergenic |
| ATCACTGAAGAAGAGAATCA+TGG | 0.572196 | 3_2:-13964946 | Msa0396140:CDS |
| AGAGTAACTGCTATTGGCAA+TGG | 0.579028 | 3_2:-13963596 | Msa0396140:CDS |
| CAATTGGGAAATAATTGTAG+TGG | 0.580003 | 3_2:-13963458 | Msa0396140:CDS |
| AGATGTAGGACTTGTTGTAA+GGG | 0.582676 | 3_2:-13964820 | Msa0396140:CDS |
| AGAAGAGAATCATGGCAAGA+TGG | 0.584436 | 3_2:-13964938 | Msa0396140:CDS |
| TGTGTATGTCTATATAAATG+GGG | 0.586918 | 3_2:-13959446 | Msa0396140:three_prime_UTR |
| CGTTCCCGACGACGTGTCGA+AGG | 0.590725 | 3_2:+13964754 | None:intergenic |
| AGAGAAACCCTTTGAAAACA+TGG | 0.595856 | 3_2:+13963531 | None:intergenic |
| TGATGATGTTGAAGAGAAGA+AGG | 0.599517 | 3_2:+13965228 | None:intergenic |
| ATTGTGTGTTTAGAAGATGT+AGG | 0.602227 | 3_2:-13964834 | Msa0396140:CDS |
| TATAGAGTGTGTCAAGATTG+TGG | 0.606289 | 3_2:-13964874 | Msa0396140:CDS |
| TCTATGATCATGGTGTTGAT+GGG | 0.608318 | 3_2:-13963511 | Msa0396140:CDS |
| CAAGGTGTAGCAGTCAGAAG+TGG | 0.610432 | 3_2:+13965093 | None:intergenic |
| TGCAGATGCAGGTTTCAAAG+AGG | 0.617800 | 3_2:-13963663 | Msa0396140:intron |
| GCTACTAGCTCTTGTCACCA+AGG | 0.619674 | 3_2:-13964571 | Msa0396140:intron |
| TGTTGAAGAGAAGAAGGTGA+TGG | 0.622629 | 3_2:+13965234 | None:intergenic |
| GACACGTCGTCGGGAACGGG+AGG | 0.631647 | 3_2:-13964749 | Msa0396140:CDS |
| AGGACTTGTTGTAAGGGACG+TGG | 0.632558 | 3_2:-13964814 | Msa0396140:CDS |
| ATGGCTAGCTAGCAGAAGCA+GGG | 0.656680 | 3_2:+13963384 | None:intergenic |
| GAGGTGGAGATGTTTGCCGG+TGG | 0.687056 | 3_2:-13964730 | Msa0396140:CDS |
| GTAAGCAATTAGGGACTGGG+AGG | 0.689897 | 3_2:+13959599 | None:intergenic |
| GCTGGTGCATGAACATGACC+TGG | 0.691114 | 3_2:+13963635 | None:intergenic |
| ATGGCCACTAATATGAACTG+TGG | 0.704516 | 3_2:+13963550 | None:intergenic |
| AATTGAAGTTCTGAAACACA+AGG | 0.729820 | 3_2:+13963476 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATAAAAATAAAAAAAA+AGG | + | chr3_2:13960660-13960679 | None:intergenic | 0.0% |
| !!! | TTTTATATTTTTATATATAA+TGG | + | chr3_2:13961782-13961801 | None:intergenic | 0.0% |
| !!! | TATATTTTTATATATAATGG+CGG | + | chr3_2:13961779-13961798 | None:intergenic | 10.0% |
| !! | ACAAAAAGTTAAATTATATT+AGG | - | chr3_2:13963914-13963933 | Msa0396140:intron | 10.0% |
| !! | TTTATAACACTAAAAAAATT+GGG | + | chr3_2:13964044-13964063 | None:intergenic | 10.0% |
| !! | ATTTATAACACTAAAAAAAT+TGG | + | chr3_2:13964045-13964064 | None:intergenic | 10.0% |
| !! | GTTTGAATTATAAAAATTAA+GGG | + | chr3_2:13964252-13964271 | None:intergenic | 10.0% |
| !! | TGTTTGAATTATAAAAATTA+AGG | + | chr3_2:13964253-13964272 | None:intergenic | 10.0% |
| !!! | ATAATAGTAACAACAATTTT+TGG | - | chr3_2:13959845-13959864 | Msa0396140:intron | 15.0% |
| !! | TTTAAATGTTTAGATTGAAA+AGG | - | chr3_2:13960359-13960378 | Msa0396140:intron | 15.0% |
| !! | GATAATAAATTACATCAATT+TGG | + | chr3_2:13961065-13961084 | None:intergenic | 15.0% |
| !! | TGAAATTATTATAACTGAAA+AGG | - | chr3_2:13961150-13961169 | Msa0396140:intron | 15.0% |
| !! | TTTGAACAATATAACAAATA+TGG | + | chr3_2:13961564-13961583 | None:intergenic | 15.0% |
| !!! | TTGATATTTAAAAGATTTTG+TGG | - | chr3_2:13961623-13961642 | Msa0396140:intron | 15.0% |
| !!! | ATATTTTTATATATAATGGC+GGG | + | chr3_2:13961778-13961797 | None:intergenic | 15.0% |
| !!! | TGATTTTCTCAAATTATTAA+TGG | - | chr3_2:13962027-13962046 | Msa0396140:intron | 15.0% |
| !!! | AAATCAAATTCTAAAATTGT+AGG | + | chr3_2:13962491-13962510 | None:intergenic | 15.0% |
| !!! | TTTTTGTTTATATTTAAGAC+CGG | + | chr3_2:13962686-13962705 | None:intergenic | 15.0% |
| !! | TTATTTATTGTTAAGAAAGT+TGG | - | chr3_2:13962817-13962836 | Msa0396140:intron | 15.0% |
| !! | AAAATATGGAGTAAATTAAA+AGG | + | chr3_2:13963171-13963190 | None:intergenic | 15.0% |
| !! | TAATTAAAATGTGAAAGTTT+AGG | + | chr3_2:13963455-13963474 | None:intergenic | 15.0% |
| !!! | TAAGCAAAAAACTATTTTTT+AGG | + | chr3_2:13963679-13963698 | None:intergenic | 15.0% |
| !! | TAAAGAAACTTTAATTAACT+AGG | - | chr3_2:13963944-13963963 | Msa0396140:intron | 15.0% |
| !!! | TGTGACATTTTAATATTTAA+AGG | - | chr3_2:13964068-13964087 | Msa0396140:intron | 15.0% |
| !!! | GTGACATTTTAATATTTAAA+GGG | - | chr3_2:13964069-13964088 | Msa0396140:intron | 15.0% |
| !!! | TGACATTTTAATATTTAAAG+GGG | - | chr3_2:13964070-13964089 | Msa0396140:intron | 15.0% |
| !! | TAAATTAAGCAAAATATGTT+AGG | + | chr3_2:13964602-13964621 | None:intergenic | 15.0% |
| !! | ATTAATTTACACAATTAAAG+TGG | + | chr3_2:13965243-13965262 | None:intergenic | 15.0% |
| !!! | TGTTGATTTATATAGAGAAT+GGG | + | chr3_2:13959494-13959513 | None:intergenic | 20.0% |
| !!! | TTGTTGATTTATATAGAGAA+TGG | + | chr3_2:13959495-13959514 | None:intergenic | 20.0% |
| !!! | TTGTTGTTACTATTATTGTT+AGG | + | chr3_2:13959841-13959860 | None:intergenic | 20.0% |
| !!! | AACATTATTTTGTTCATTGA+TGG | - | chr3_2:13960709-13960728 | Msa0396140:intron | 20.0% |
| !! | AAGTTAAAACATGAATTGTT+TGG | + | chr3_2:13960791-13960810 | None:intergenic | 20.0% |
| !! | ACTCTTATCATATCAATTTA+TGG | + | chr3_2:13961105-13961124 | None:intergenic | 20.0% |
| !! | TCAGTTATAATAATTTCATG+TGG | + | chr3_2:13961148-13961167 | None:intergenic | 20.0% |
| !!! | AATAATTGTAGTGGAAAAAA+TGG | - | chr3_2:13961413-13961432 | Msa0396140:intron | 20.0% |
| !!! | TATTTTTATATATAATGGCG+GGG | + | chr3_2:13961777-13961796 | None:intergenic | 20.0% |
| !!! | TTTTTTCTGATATTCAAAGT+CGG | + | chr3_2:13961913-13961932 | None:intergenic | 20.0% |
| !! | TTTAGTGTAATTATATGTGT+CGG | + | chr3_2:13962002-13962021 | None:intergenic | 20.0% |
| !! | AAACTAAAAAGTGAAAACTA+TGG | - | chr3_2:13962325-13962344 | Msa0396140:intron | 20.0% |
| !!! | TTGTATTGCAACAAATTTTT+TGG | - | chr3_2:13962393-13962412 | Msa0396140:intron | 20.0% |
| !! | TCAAATAAAGTTGAATTATC+TGG | + | chr3_2:13962740-13962759 | None:intergenic | 20.0% |
| !! | ATGTATGTAGTCTTTATTAT+AGG | - | chr3_2:13963069-13963088 | Msa0396140:intron | 20.0% |
| !! | TGAATCTCAATAGTAAAATA+TGG | + | chr3_2:13963185-13963204 | None:intergenic | 20.0% |
| !! | AAATATTATTGCACTTGTAA+AGG | - | chr3_2:13963241-13963260 | Msa0396140:intron | 20.0% |
| !!! | TCTTTGGATACTTTATTTTT+TGG | - | chr3_2:13963506-13963525 | Msa0396140:CDS | 20.0% |
| !!! | TAAGCAAAAAACTACTTTTT+AGG | - | chr3_2:13963590-13963609 | Msa0396140:CDS | 20.0% |
| !!! | TTTTTTGTATTTATGGAGAT+TGG | + | chr3_2:13963866-13963885 | None:intergenic | 20.0% |
| !! | ATTGTACTATATTAAAGAGA+TGG | + | chr3_2:13964017-13964036 | None:intergenic | 20.0% |
| !! | ATATGAGATGTATAATTCTA+TGG | + | chr3_2:13964139-13964158 | None:intergenic | 20.0% |
| !! | CATCTCATTTATTTCAAATT+TGG | - | chr3_2:13964390-13964409 | Msa0396140:intron | 20.0% |
| !! | TAGACAATAAATAAATTGAG+AGG | + | chr3_2:13964492-13964511 | None:intergenic | 20.0% |
| !!! | GAAATATTTCCATTTTGATA+AGG | + | chr3_2:13964518-13964537 | None:intergenic | 20.0% |
| !! | AAACAAATTGATGTTATGTT+AGG | + | chr3_2:13964542-13964561 | None:intergenic | 20.0% |
| !!! | GAAAGTAATGTTTTAAAAAC+CGG | - | chr3_2:13964855-13964874 | Msa0396140:CDS | 20.0% |
| !! | TACAAAAAGCAAAAAGTTTA+AGG | + | chr3_2:13964916-13964935 | None:intergenic | 20.0% |
| !! | TTTATCATCGAATTTAATCA+TGG | - | chr3_2:13964971-13964990 | Msa0396140:CDS | 20.0% |
| !!! | ACTTTTTGTATGTTAATTTC+AGG | - | chr3_2:13965141-13965160 | Msa0396140:CDS | 20.0% |
| !! | TAAAAACTTCAGTTAAACAT+TGG | + | chr3_2:13965370-13965389 | None:intergenic | 20.0% |
| !! | TTTGTGTATGTCTATATAAA+TGG | - | chr3_2:13965414-13965433 | Msa0396140:five_prime_UTR | 20.0% |
| !! | TTGTGTATGTCTATATAAAT+GGG | - | chr3_2:13965415-13965434 | Msa0396140:five_prime_UTR | 20.0% |
| !! | CATATTTTGCATCAAAAGAA+TGG | - | chr3_2:13959435-13959454 | Msa0396140:three_prime_UTR | 25.0% |
| ! | TTTATATAGAGAATGGGAAT+GGG | + | chr3_2:13959488-13959507 | None:intergenic | 25.0% |
| ! | ATTTATATAGAGAATGGGAA+TGG | + | chr3_2:13959489-13959508 | None:intergenic | 25.0% |
| !!! | GATATTGTTTTGTGTTATTG+AGG | + | chr3_2:13959520-13959539 | None:intergenic | 25.0% |
| !!! | ACAAATTCTTTGAGATTTTG+AGG | + | chr3_2:13959558-13959577 | None:intergenic | 25.0% |
| ! | AAGAGACAAAAAGGTTTATT+AGG | - | chr3_2:13960201-13960220 | Msa0396140:intron | 25.0% |
| ! | AGAGACAAAAAGGTTTATTA+GGG | - | chr3_2:13960202-13960221 | Msa0396140:intron | 25.0% |
| ! | GTTTAGATTGAAAAGGAATT+TGG | - | chr3_2:13960366-13960385 | Msa0396140:intron | 25.0% |
| ! | CATATTAGTATTGTATACAC+CGG | - | chr3_2:13960685-13960704 | Msa0396140:intron | 25.0% |
| ! | ATATTAGTATTGTATACACC+GGG | - | chr3_2:13960686-13960705 | Msa0396140:intron | 25.0% |
| ! | AATGAACAAAATAATGTTCC+CGG | + | chr3_2:13960707-13960726 | None:intergenic | 25.0% |
| !!! | TATTTTGTTCATTGATGGAT+TGG | - | chr3_2:13960714-13960733 | Msa0396140:intron | 25.0% |
| !!! | GTCAATTTGTCTTGTTTTAT+AGG | - | chr3_2:13960947-13960966 | Msa0396140:intron | 25.0% |
| !! | ACAAAAAAGTTTTTACTAGC+CGG | - | chr3_2:13961830-13961849 | Msa0396140:intron | 25.0% |
| !! | TTTTTCTGATATTCAAAGTC+GGG | + | chr3_2:13961912-13961931 | None:intergenic | 25.0% |
| ! | GACTTTGAATATCAGAAAAA+AGG | - | chr3_2:13961912-13961931 | Msa0396140:intron | 25.0% |
| ! | TATTAATGGTATTAACGTGT+CGG | - | chr3_2:13962041-13962060 | Msa0396140:intron | 25.0% |
| ! | CAAATCTACTTCAAATTTGA+TGG | + | chr3_2:13962158-13962177 | None:intergenic | 25.0% |
| !! | ATTTTACATTATTGGTACAC+TGG | + | chr3_2:13962278-13962297 | None:intergenic | 25.0% |
| !! | GTGGTTACATTTTACATTAT+TGG | + | chr3_2:13962286-13962305 | None:intergenic | 25.0% |
| ! | CTACTATCTCATTATTATAG+TGG | + | chr3_2:13962305-13962324 | None:intergenic | 25.0% |
| ! | GGAATATTGGAGAAAAATAT+GGG | + | chr3_2:13962419-13962438 | None:intergenic | 25.0% |
| !! | TCTTTGTGAATTATTTTCTC+CGG | - | chr3_2:13962664-13962683 | Msa0396140:intron | 25.0% |
| !! | TTTTTGCTTATATTAGTGAC+CGG | + | chr3_2:13963021-13963040 | None:intergenic | 25.0% |
| ! | TAAGCAAAAATCCAATTTCT+AGG | - | chr3_2:13963031-13963050 | Msa0396140:intron | 25.0% |
| ! | AATTGAATGAACCTAGAAAT+TGG | + | chr3_2:13963045-13963064 | None:intergenic | 25.0% |
| ! | TAAGCAAAAATGTACTTTCT+AGG | + | chr3_2:13963120-13963139 | None:intergenic | 25.0% |
| ! | AATATCACTTGGAAAATCAA+TGG | - | chr3_2:13963308-13963327 | Msa0396140:intron | 25.0% |
| ! | ATGGACAACCATTAAAAAAA+AGG | - | chr3_2:13963327-13963346 | Msa0396140:intron | 25.0% |
| ! | ACAACCATTAAAAAAAAGGT+AGG | - | chr3_2:13963331-13963350 | Msa0396140:intron | 25.0% |
| !!! | CATTCCTACCTTTTTTTTAA+TGG | + | chr3_2:13963338-13963357 | None:intergenic | 25.0% |
| ! | CATTAAAAAAAAGGTAGGAA+TGG | - | chr3_2:13963336-13963355 | Msa0396140:intron | 25.0% |
| ! | ACTAATACACACTCATATAA+TGG | + | chr3_2:13963377-13963396 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATAATAGTGAC+AGG | + | chr3_2:13963689-13963708 | None:intergenic | 25.0% |
| ! | CATTGAATAAATGATGTATG+TGG | + | chr3_2:13963654-13963673 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATAATAGTGAC+CGG | - | chr3_2:13963689-13963708 | Msa0396140:intron | 25.0% |
| ! | ATATATATATATACTCCCTC+CGG | + | chr3_2:13963711-13963730 | None:intergenic | 25.0% |
| ! | TATATTAAAGAGATGGAGAT+TGG | + | chr3_2:13964010-13964029 | None:intergenic | 25.0% |
| ! | ATTCAAACACTAGTAAACAT+AGG | - | chr3_2:13964264-13964283 | Msa0396140:intron | 25.0% |
| ! | AAACAAATGTTGCAGTTAAA+TGG | + | chr3_2:13964352-13964371 | None:intergenic | 25.0% |
| ! | TTCATTGCAAGAAACAATAA+TGG | + | chr3_2:13964448-13964467 | None:intergenic | 25.0% |
| ! | TGTCTATTACCTTATCAAAA+TGG | - | chr3_2:13964506-13964525 | Msa0396140:intron | 25.0% |
| ! | TTATTCAATGTCCTAAAAAC+CGG | + | chr3_2:13965056-13965075 | None:intergenic | 25.0% |
| !!! | AACAGTGATTTTAACTTTGT+AGG | - | chr3_2:13965102-13965121 | Msa0396140:CDS | 25.0% |
| ! | TACACAATTAAAGTGGAATA+TGG | + | chr3_2:13965236-13965255 | None:intergenic | 25.0% |
| ! | AAAATTTCTTGCACTAGATT+AGG | - | chr3_2:13965317-13965336 | Msa0396140:five_prime_UTR | 25.0% |
| ! | AAATTTCTTGCACTAGATTA+GGG | - | chr3_2:13965318-13965337 | Msa0396140:five_prime_UTR | 25.0% |
| ! | TGTGTATGTCTATATAAATG+GGG | - | chr3_2:13965416-13965435 | Msa0396140:five_prime_UTR | 25.0% |
| !!! | TATATAAATGGGGCATTTTA+TGG | - | chr3_2:13965426-13965445 | Msa0396140:five_prime_UTR | 25.0% |
| !!! | CTTTGAGATTTTGAGGTTTT+TGG | + | chr3_2:13959551-13959570 | None:intergenic | 30.0% |
| GAATTGTGATCATGTGAAAT+GGG | + | chr3_2:13959697-13959716 | None:intergenic | 30.0% | |
| TGAATTGTGATCATGTGAAA+TGG | + | chr3_2:13959698-13959717 | None:intergenic | 30.0% | |
| ! | AGGATTTTCTTGAACTTCAT+TGG | + | chr3_2:13959821-13959840 | None:intergenic | 30.0% |
| !!! | ACAACAATTTTTGGAACCTT+AGG | - | chr3_2:13959854-13959873 | Msa0396140:intron | 30.0% |
| GTAGTGAATCTTCCAAAAAA+AGG | - | chr3_2:13959889-13959908 | Msa0396140:intron | 30.0% | |
| ATTGTGTGTTTAGAAGATGT+AGG | - | chr3_2:13960028-13960047 | Msa0396140:intron | 30.0% | |
| !! | AAAAGTAAGTGAAAGTACCT+TGG | + | chr3_2:13960311-13960330 | None:intergenic | 30.0% |
| ACACATAGACTATACATGTT+TGG | + | chr3_2:13960452-13960471 | None:intergenic | 30.0% | |
| !!! | CTGCTTTTTGAAAATCAAGT+GGG | - | chr3_2:13960525-13960544 | Msa0396140:intron | 30.0% |
| GGTTAATGGTCAAATATAGT+AGG | + | chr3_2:13960601-13960620 | None:intergenic | 30.0% | |
| ! | TTAGTATTTTCTCCTTCATC+AGG | - | chr3_2:13960996-13961015 | Msa0396140:intron | 30.0% |
| ! | TAGTATTTTCTCCTTCATCA+GGG | - | chr3_2:13960997-13961016 | Msa0396140:intron | 30.0% |
| !! | GTTTTGAGCTAAGGTTATAA+AGG | + | chr3_2:13961036-13961055 | None:intergenic | 30.0% |
| ! | GAGTAATTTGTGTGTAATTG+AGG | - | chr3_2:13961121-13961140 | Msa0396140:intron | 30.0% |
| !! | AATTGAAGTTCTGAAACACA+AGG | + | chr3_2:13961389-13961408 | None:intergenic | 30.0% |
| TTGTGTTTCAGAACTTCAAT+TGG | - | chr3_2:13961388-13961407 | Msa0396140:intron | 30.0% | |
| TGTGTTTCAGAACTTCAATT+GGG | - | chr3_2:13961389-13961408 | Msa0396140:intron | 30.0% | |
| CAATTGGGAAATAATTGTAG+TGG | - | chr3_2:13961404-13961423 | Msa0396140:intron | 30.0% | |
| ! | TTTTCTGATATTCAAAGTCG+GGG | + | chr3_2:13961911-13961930 | None:intergenic | 30.0% |
| GGGAATATTGGAGAAAAATA+TGG | + | chr3_2:13962420-13962439 | None:intergenic | 30.0% | |
| TAATATCAATTGTGCATGAG+GGG | + | chr3_2:13962441-13962460 | None:intergenic | 30.0% | |
| CTAATATCAATTGTGCATGA+GGG | + | chr3_2:13962442-13962461 | None:intergenic | 30.0% | |
| TAACCAAAATAGTGATCACA+AGG | + | chr3_2:13962562-13962581 | None:intergenic | 30.0% | |
| AGATATCCAACATTATGTCT+TGG | - | chr3_2:13962599-13962618 | Msa0396140:intron | 30.0% | |
| CAAAAACCAAGACATAATGT+TGG | + | chr3_2:13962608-13962627 | None:intergenic | 30.0% | |
| ! | ATGACATGACTTTTCTTGTT+TGG | - | chr3_2:13962630-13962649 | Msa0396140:intron | 30.0% |
| CTGAATTTAAACGTTTGAGA+TGG | - | chr3_2:13962894-13962913 | Msa0396140:intron | 30.0% | |
| ! | TTTTTGCTTATATCAGTGAC+CGG | - | chr3_2:13963130-13963149 | Msa0396140:intron | 30.0% |
| ! | TACACTATAGACTTCACTTT+TGG | + | chr3_2:13963219-13963238 | None:intergenic | 30.0% |
| ATTATTGCACTTGTAAAGGA+AGG | - | chr3_2:13963245-13963264 | Msa0396140:intron | 30.0% | |
| TTATTGCACTTGTAAAGGAA+GGG | - | chr3_2:13963246-13963265 | Msa0396140:intron | 30.0% | |
| ! | GTCACTCTAAAAATATCACT+TGG | - | chr3_2:13963297-13963316 | Msa0396140:intron | 30.0% |
| ACACTGATGACAGAATATTA+GGG | + | chr3_2:13963413-13963432 | None:intergenic | 30.0% | |
| TAATGAACTGCTTAGTATAG+AGG | - | chr3_2:13963473-13963492 | Msa0396140:CDS | 30.0% | |
| TAACTGCAACATTTGTTTGA+TGG | - | chr3_2:13964354-13964373 | Msa0396140:intron | 30.0% | |
| AACTGCAACATTTGTTTGAT+GGG | - | chr3_2:13964355-13964374 | Msa0396140:intron | 30.0% | |
| TTTCATTCTCGTAACAACTA+TGG | + | chr3_2:13964660-13964679 | None:intergenic | 30.0% | |
| ! | CATTATTCGATTGGTTCAAT+CGG | + | chr3_2:13965002-13965021 | None:intergenic | 30.0% |
| CTTTCATGTCATTATTCGAT+TGG | + | chr3_2:13965011-13965030 | None:intergenic | 30.0% | |
| ! | TGTATGTTAATTTCAGGTGA+TGG | - | chr3_2:13965147-13965166 | Msa0396140:CDS | 30.0% |
| !!! | GGTTAGTTTTCTCAACAAAA+CGG | + | chr3_2:13965215-13965234 | None:intergenic | 30.0% |
| CATGCAGACTTAAAGATTAA+TGG | - | chr3_2:13965285-13965304 | Msa0396140:exon | 30.0% | |
| ! | AGTGCAAGAAATTTTACCAA+GGG | + | chr3_2:13965312-13965331 | None:intergenic | 30.0% |
| ! | TAGTGCAAGAAATTTTACCA+AGG | + | chr3_2:13965313-13965332 | None:intergenic | 30.0% |
| !! | TTTGAGGTTTTTGGAGAAAG+AGG | + | chr3_2:13959542-13959561 | None:intergenic | 35.0% |
| CTTGTTCCAATGAGTATGTT+AGG | - | chr3_2:13959580-13959599 | Msa0396140:three_prime_UTR | 35.0% | |
| CTAAGACCTAACATACTCAT+TGG | + | chr3_2:13959589-13959608 | None:intergenic | 35.0% | |
| ! | TGATGATGTTGAAGAGAAGA+AGG | + | chr3_2:13959637-13959656 | None:intergenic | 35.0% |
| !!! | GTTGGTTTTGGTTTTGGTTT+TGG | + | chr3_2:13959675-13959694 | None:intergenic | 35.0% |
| !!! | AAATGGGTTGGTTTTGGTTT+TGG | + | chr3_2:13959681-13959700 | None:intergenic | 35.0% |
| AATGCCAAAACCAACACTTA+AGG | + | chr3_2:13959746-13959765 | None:intergenic | 35.0% | |
| !! | TCTTGAACTTCATTGGTTTG+AGG | + | chr3_2:13959814-13959833 | None:intergenic | 35.0% |
| TTTGGAAGATTCACTACTTC+AGG | + | chr3_2:13959886-13959905 | None:intergenic | 35.0% | |
| !!! | TCAGTGATCACTCCTTTTTT+TGG | + | chr3_2:13959904-13959923 | None:intergenic | 35.0% |
| ATCACTGAAGAAGAGAATCA+TGG | - | chr3_2:13959916-13959935 | Msa0396140:intron | 35.0% | |
| ! | ATGATGGAGAGTGAAGAAAA+TGG | - | chr3_2:13959949-13959968 | Msa0396140:intron | 35.0% |
| AGTGAAGAAAATGGTGTGTA+TGG | - | chr3_2:13959958-13959977 | Msa0396140:intron | 35.0% | |
| TATAGAGTGTGTCAAGATTG+TGG | - | chr3_2:13959988-13960007 | Msa0396140:intron | 35.0% | |
| TGTGTCAAGATTGTGGTAAT+AGG | - | chr3_2:13959995-13960014 | Msa0396140:intron | 35.0% | |
| GTGTCAAGATTGTGGTAATA+GGG | - | chr3_2:13959996-13960015 | Msa0396140:intron | 35.0% | |
| !! | AAGATGTAGGACTTGTTGTA+AGG | - | chr3_2:13960041-13960060 | Msa0396140:intron | 35.0% |
| !! | AGATGTAGGACTTGTTGTAA+GGG | - | chr3_2:13960042-13960061 | Msa0396140:intron | 35.0% |
| !! | GTACTCATTTGAAGAGTACT+TGG | - | chr3_2:13960082-13960101 | Msa0396140:intron | 35.0% |
| ! | TCTGGTGTTAAGAGACAAAA+AGG | - | chr3_2:13960192-13960211 | Msa0396140:intron | 35.0% |
| !! | TCTCATAGCTCTAACTCTAA+TGG | - | chr3_2:13960249-13960268 | Msa0396140:intron | 35.0% |
| GTATAGTCTATGTGTATGTC+TGG | - | chr3_2:13960457-13960476 | Msa0396140:intron | 35.0% | |
| ! | CCACTTGATTTTCAAAAAGC+AGG | + | chr3_2:13960527-13960546 | None:intergenic | 35.0% |
| !!! | CCTGCTTTTTGAAAATCAAG+TGG | - | chr3_2:13960524-13960543 | Msa0396140:intron | 35.0% |
| TTTATGTGCAATCATGCTGT+TGG | - | chr3_2:13960742-13960761 | Msa0396140:intron | 35.0% | |
| !!! | TGGATAGTTGTTTTGAGCTA+AGG | + | chr3_2:13961045-13961064 | None:intergenic | 35.0% |
| TGAAGATGAGTTTGCCTATT+TGG | - | chr3_2:13961289-13961308 | Msa0396140:intron | 35.0% | |
| AATATGAACTGTGGCCAAAT+AGG | + | chr3_2:13961306-13961325 | None:intergenic | 35.0% | |
| ! | ATTAGTGGCCATGTTTTCAA+AGG | - | chr3_2:13961323-13961342 | Msa0396140:intron | 35.0% |
| ! | TTAGTGGCCATGTTTTCAAA+GGG | - | chr3_2:13961324-13961343 | Msa0396140:intron | 35.0% |
| ! | AGAGAAACCCTTTGAAAACA+TGG | + | chr3_2:13961334-13961353 | None:intergenic | 35.0% |
| AAAGGGTTTCTCTATGATCA+TGG | - | chr3_2:13961341-13961360 | Msa0396140:intron | 35.0% | |
| !! | TCTATGATCATGGTGTTGAT+GGG | - | chr3_2:13961351-13961370 | Msa0396140:intron | 35.0% |
| TACCTGATAAGCAATCTTCA+TGG | + | chr3_2:13961500-13961519 | None:intergenic | 35.0% | |
| ! | ATCTATTTTACGATCCGTCA+GGG | + | chr3_2:13961719-13961738 | None:intergenic | 35.0% |
| ! | TATCTATTTTACGATCCGTC+AGG | + | chr3_2:13961720-13961739 | None:intergenic | 35.0% |
| !! | TTTTATATATAATGGCGGGG+CGG | + | chr3_2:13961774-13961793 | None:intergenic | 35.0% |
| ! | AAAGTTTTTACTAGCCGGAT+AGG | - | chr3_2:13961835-13961854 | Msa0396140:intron | 35.0% |
| ! | CAGAAAAAAGGTATGAAGCA+TGG | - | chr3_2:13961924-13961943 | Msa0396140:intron | 35.0% |
| TAGATTTGAATGAACCCTCA+AGG | - | chr3_2:13962170-13962189 | Msa0396140:intron | 35.0% | |
| AGATTTGAATGAACCCTCAA+GGG | - | chr3_2:13962171-13962190 | Msa0396140:intron | 35.0% | |
| GTTCAACTAGGTATGACAAT+GGG | + | chr3_2:13962203-13962222 | None:intergenic | 35.0% | |
| TGTTCAACTAGGTATGACAA+TGG | + | chr3_2:13962204-13962223 | None:intergenic | 35.0% | |
| AAGATGTGCAATGTTCAACT+AGG | + | chr3_2:13962215-13962234 | None:intergenic | 35.0% | |
| AATGCATCACTTCACTTTGA+TGG | - | chr3_2:13962239-13962258 | Msa0396140:intron | 35.0% | |
| ATGCATCACTTCACTTTGAT+GGG | - | chr3_2:13962240-13962259 | Msa0396140:intron | 35.0% | |
| ! | ACATTATTGGTACACTGGTT+TGG | + | chr3_2:13962273-13962292 | None:intergenic | 35.0% |
| AAGTGAAAACTATGGTGTGA+TGG | - | chr3_2:13962333-13962352 | Msa0396140:intron | 35.0% | |
| AGTGAAAACTATGGTGTGAT+GGG | - | chr3_2:13962334-13962353 | Msa0396140:intron | 35.0% | |
| TTGTTGCAATACAAGTTGTG+AGG | + | chr3_2:13962387-13962406 | None:intergenic | 35.0% | |
| AATATCAATTGTGCATGAGG+GGG | + | chr3_2:13962440-13962459 | None:intergenic | 35.0% | |
| CCTAATATCAATTGTGCATG+AGG | + | chr3_2:13962443-13962462 | None:intergenic | 35.0% | |
| CCTCATGCACAATTGATATT+AGG | - | chr3_2:13962440-13962459 | Msa0396140:intron | 35.0% | |
| ! | TCTCCTTGTGATCACTATTT+TGG | - | chr3_2:13962556-13962575 | Msa0396140:intron | 35.0% |
| AAATCTTTCCACTACTACTC+TGG | + | chr3_2:13962788-13962807 | None:intergenic | 35.0% | |
| TGACAGAATATTAGGGATAG+TGG | + | chr3_2:13963406-13963425 | None:intergenic | 35.0% | |
| CACACTGATGACAGAATATT+AGG | + | chr3_2:13963414-13963433 | None:intergenic | 35.0% | |
| AAATGTGAAAGTTTAGGCTG+TGG | + | chr3_2:13963449-13963468 | None:intergenic | 35.0% | |
| !!! | TAGAGGTGTTGCTTTTTCTT+TGG | - | chr3_2:13963490-13963509 | Msa0396140:CDS | 35.0% |
| TGCTTATAATAGTGACAGGA+GGG | + | chr3_2:13963576-13963595 | None:intergenic | 35.0% | |
| TTGCTTATAATAGTGACAGG+AGG | + | chr3_2:13963577-13963596 | None:intergenic | 35.0% | |
| !!! | CTAGTAGTAGCTTTTTTGTG+GGG | + | chr3_2:13964229-13964248 | None:intergenic | 35.0% |
| !!! | GCTAGTAGTAGCTTTTTTGT+GGG | + | chr3_2:13964230-13964249 | None:intergenic | 35.0% |
| ACACTAGTAAACATAGGACT+AGG | - | chr3_2:13964270-13964289 | Msa0396140:intron | 35.0% | |
| TAGTAAACATAGGACTAGGA+AGG | - | chr3_2:13964274-13964293 | Msa0396140:intron | 35.0% | |
| TTCATCAAACACATCTACCT+TGG | - | chr3_2:13964308-13964327 | Msa0396140:intron | 35.0% | |
| GTTACGAGAATGAAACATCA+TGG | - | chr3_2:13964665-13964684 | Msa0396140:CDS | 35.0% | |
| TAATGACATGAAAGCTTCGT+CGG | - | chr3_2:13965017-13965036 | Msa0396140:CDS | 35.0% | |
| TGAATAAAACGAGAAGAGCT+AGG | - | chr3_2:13965069-13965088 | Msa0396140:CDS | 35.0% | |
| TAACTTTGTAGGTGACTTTG+AGG | - | chr3_2:13965113-13965132 | Msa0396140:CDS | 35.0% | |
| TTTCATGAACCAGCAAAGAA+TGG | - | chr3_2:13965176-13965195 | Msa0396140:CDS | 35.0% | |
| ATAAAACGTCCATTCTTTGC+TGG | + | chr3_2:13965188-13965207 | None:intergenic | 35.0% | |
| AGTCTGCATGTAAGCAATTA+GGG | + | chr3_2:13965275-13965294 | None:intergenic | 35.0% | |
| AAGTCTGCATGTAAGCAATT+AGG | + | chr3_2:13965276-13965295 | None:intergenic | 35.0% | |
| CTTAAAGATTAATGGTCCCT+TGG | - | chr3_2:13965293-13965312 | Msa0396140:exon | 35.0% | |
| !! | GGGCATTTTATGGTCTTAAT+CGG | - | chr3_2:13965436-13965455 | Msa0396140:five_prime_UTR | 35.0% |
| TGTTGAAGAGAAGAAGGTGA+TGG | + | chr3_2:13959631-13959650 | None:intergenic | 40.0% | |
| !!! | CATGTGAAATGGGTTGGTTT+TGG | + | chr3_2:13959687-13959706 | None:intergenic | 40.0% |
| TGTGATCATGTGAAATGGGT+TGG | + | chr3_2:13959693-13959712 | None:intergenic | 40.0% | |
| ACACTTAAGGAAGCTGATGA+AGG | + | chr3_2:13959733-13959752 | None:intergenic | 40.0% | |
| TCATCAGCTTCCTTAAGTGT+TGG | - | chr3_2:13959733-13959752 | Msa0396140:intron | 40.0% | |
| !!! | GCTTCCTTAAGTGTTGGTTT+TGG | - | chr3_2:13959739-13959758 | Msa0396140:intron | 40.0% |
| ! | GTTTGAGGTTGTTGTTGTTG+TGG | + | chr3_2:13959799-13959818 | None:intergenic | 40.0% |
| AGAAGAGAATCATGGCAAGA+TGG | - | chr3_2:13959924-13959943 | Msa0396140:intron | 40.0% | |
| GAGCTAGTAGCAAAACTCTT+TGG | + | chr3_2:13960282-13960301 | None:intergenic | 40.0% | |
| CTAATGATCGAGAATCGTTG+CGG | + | chr3_2:13960911-13960930 | None:intergenic | 40.0% | |
| GAGCTAAGGTTATAAAGGAC+CGG | + | chr3_2:13961031-13961050 | None:intergenic | 40.0% | |
| TTCTGTTGAATTGCAGATGC+AGG | - | chr3_2:13961188-13961207 | Msa0396140:intron | 40.0% | |
| TGCCATAGAGTAACTGCTAT+TGG | - | chr3_2:13961260-13961279 | Msa0396140:intron | 40.0% | |
| TGCCAATAGCAGTTACTCTA+TGG | + | chr3_2:13961265-13961284 | None:intergenic | 40.0% | |
| AGAGTAACTGCTATTGGCAA+TGG | - | chr3_2:13961266-13961285 | Msa0396140:intron | 40.0% | |
| TTGGCCACAGTTCATATTAG+TGG | - | chr3_2:13961308-13961327 | Msa0396140:intron | 40.0% | |
| ATGGCCACTAATATGAACTG+TGG | + | chr3_2:13961315-13961334 | None:intergenic | 40.0% | |
| ! | CTCTATGATCATGGTGTTGA+TGG | - | chr3_2:13961350-13961369 | Msa0396140:intron | 40.0% |
| !! | AGTTCTGAAACACAAGGCAT+TGG | + | chr3_2:13961383-13961402 | None:intergenic | 40.0% |
| GGTGAATGTTCTTCTGCAAT+TGG | - | chr3_2:13961434-13961453 | Msa0396140:intron | 40.0% | |
| GCAGGGTAAGCATTATTGTT+TGG | + | chr3_2:13961464-13961483 | None:intergenic | 40.0% | |
| AGCCATGAAGATTGCTTATC+AGG | - | chr3_2:13961495-13961514 | Msa0396140:intron | 40.0% | |
| ! | TTTATATATAATGGCGGGGC+GGG | + | chr3_2:13961773-13961792 | None:intergenic | 40.0% |
| ! | TTTTACTAGCCGGATAGGTT+TGG | - | chr3_2:13961840-13961859 | Msa0396140:intron | 40.0% |
| TTTACTAGCCGGATAGGTTT+GGG | - | chr3_2:13961841-13961860 | Msa0396140:intron | 40.0% | |
| TGATATTCAAAGTCGGGGAT+GGG | + | chr3_2:13961906-13961925 | None:intergenic | 40.0% | |
| ! | GAGTTTTCTCCTATGAAGCA+CGG | + | chr3_2:13962100-13962119 | None:intergenic | 40.0% |
| AGAAGCTAGTTCATGCAGTT+AGG | - | chr3_2:13962527-13962546 | Msa0396140:intron | 40.0% | |
| TGCTTATATTAGTGACCGGA+GGG | + | chr3_2:13963017-13963036 | None:intergenic | 40.0% | |
| TTGCTTATATTAGTGACCGG+AGG | + | chr3_2:13963018-13963037 | None:intergenic | 40.0% | |
| CACTTGTAAAGGAAGGGTAA+AGG | - | chr3_2:13963252-13963271 | Msa0396140:intron | 40.0% | |
| AGGGTAAAGGAACAGTTTAG+AGG | - | chr3_2:13963265-13963284 | Msa0396140:intron | 40.0% | |
| GGGTAAAGGAACAGTTTAGA+GGG | - | chr3_2:13963266-13963285 | Msa0396140:intron | 40.0% | |
| GGTAAAGGAACAGTTTAGAG+GGG | - | chr3_2:13963267-13963286 | Msa0396140:intron | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | - | chr3_2:13963692-13963711 | Msa0396140:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | - | chr3_2:13963693-13963712 | Msa0396140:intron | 40.0% | |
| !!! | TAGTAGCTTTTTTGTGGGGA+GGG | + | chr3_2:13964225-13964244 | None:intergenic | 40.0% |
| !!! | GGCTAGTAGTAGCTTTTTTG+TGG | + | chr3_2:13964231-13964250 | None:intergenic | 40.0% |
| CAGTTAAATGGTGACAACCT+TGG | + | chr3_2:13964340-13964359 | None:intergenic | 40.0% | |
| !! | TCTTTGCTGGTTCATGAAAC+TGG | + | chr3_2:13965175-13965194 | None:intergenic | 40.0% |
| CATGTAAGCAATTAGGGACT+GGG | + | chr3_2:13965269-13965288 | None:intergenic | 40.0% | |
| ! | GAGAACAGAACAGAGCACTA+TGG | + | chr3_2:13959463-13959482 | None:intergenic | 45.0% |
| ! | GTGATGGAGCTATGAGAACT+AGG | + | chr3_2:13959615-13959634 | None:intergenic | 45.0% |
| ! | TGTTGTTGTTGTGGCATGCA+AGG | + | chr3_2:13959790-13959809 | None:intergenic | 45.0% |
| CTACTTCAGGACACATCCTA+AGG | + | chr3_2:13959873-13959892 | None:intergenic | 45.0% | |
| TCATGGCAAGATGGCTATGA+TGG | - | chr3_2:13959933-13959952 | Msa0396140:intron | 45.0% | |
| CTACAGCTTCTGCAAAATCG+CGG | + | chr3_2:13960493-13960512 | None:intergenic | 45.0% | |
| AAAATGTTAACCAGTGCCCC+CGG | + | chr3_2:13960637-13960656 | None:intergenic | 45.0% | |
| CTTCATCAGGGTTTGAACTC+CGG | - | chr3_2:13961009-13961028 | Msa0396140:intron | 45.0% | |
| TGCAGATGCAGGTTTCAAAG+AGG | - | chr3_2:13961199-13961218 | Msa0396140:intron | 45.0% | |
| GCAGATGCAGGTTTCAAAGA+GGG | - | chr3_2:13961200-13961219 | Msa0396140:intron | 45.0% | |
| GGTTTCAAAGAGGGTTTACC+AGG | - | chr3_2:13961209-13961228 | Msa0396140:intron | 45.0% | |
| CTATGGCATCTGAATACAGC+TGG | + | chr3_2:13961248-13961267 | None:intergenic | 45.0% | |
| !! | TCTCTAAAACCGATCCCTGA+CGG | - | chr3_2:13961702-13961721 | Msa0396140:intron | 45.0% |
| ! | TTTTACGATCCGTCAGGGAT+CGG | + | chr3_2:13961714-13961733 | None:intergenic | 45.0% |
| GATATTCAAAGTCGGGGATG+GGG | + | chr3_2:13961905-13961924 | None:intergenic | 45.0% | |
| CTGATATTCAAAGTCGGGGA+TGG | + | chr3_2:13961907-13961926 | None:intergenic | 45.0% | |
| TATGAAGCATGGACACTCCT+CGG | - | chr3_2:13961935-13961954 | Msa0396140:intron | 45.0% | |
| ATCCATGTCGTGTCTGTTGT+CGG | - | chr3_2:13962065-13962084 | Msa0396140:intron | 45.0% | |
| TGCCTATATCCGTGCTTCAT+AGG | - | chr3_2:13962088-13962107 | Msa0396140:intron | 45.0% | |
| CTCCTATGAAGCACGGATAT+AGG | + | chr3_2:13962093-13962112 | None:intergenic | 45.0% | |
| TTGTGCATGAGGGGGAATAT+TGG | + | chr3_2:13962432-13962451 | None:intergenic | 45.0% | |
| ATTCGAGACCAGAGTAGTAG+TGG | - | chr3_2:13962777-13962796 | Msa0396140:intron | 45.0% | |
| CACTAACTTTCTACACCCTC+CGG | - | chr3_2:13962999-13963018 | Msa0396140:intron | 45.0% | |
| TTGCTTATATCAGTGACCGG+AGG | - | chr3_2:13963133-13963152 | Msa0396140:intron | 45.0% | |
| TGCTTATATCAGTGACCGGA+GGG | - | chr3_2:13963134-13963153 | Msa0396140:intron | 45.0% | |
| ! | AAGGAAAAGTGTACACCCTC+CGG | + | chr3_2:13963152-13963171 | None:intergenic | 45.0% |
| GAAAGTTTAGGCTGTGGTTG+TGG | + | chr3_2:13963443-13963462 | None:intergenic | 45.0% | |
| !!! | AGTAGCTTTTTTGTGGGGAG+GGG | + | chr3_2:13964224-13964243 | None:intergenic | 45.0% |
| !!! | GTAGTAGCTTTTTTGTGGGG+AGG | + | chr3_2:13964226-13964245 | None:intergenic | 45.0% |
| ! | ATCTACCTTGGTGTAGACCA+AGG | - | chr3_2:13964320-13964339 | Msa0396140:intron | 45.0% |
| CACGTCTTGCACATAGATGA+AGG | - | chr3_2:13964567-13964586 | Msa0396140:intron | 45.0% | |
| CAATGTCCTAAAAACCGGAC+CGG | + | chr3_2:13965051-13965070 | None:intergenic | 45.0% | |
| GCATGTAAGCAATTAGGGAC+TGG | + | chr3_2:13965270-13965289 | None:intergenic | 45.0% | |
| !!! | TTAATTTTTTTTTGTATTTA+TGG | + | chr3_2:13963873-13963892 | None:intergenic | 5.0% |
| !! | AAAAAAATTAATAAATGAAT+TGG | - | chr3_2:13963882-13963901 | Msa0396140:intron | 5.0% |
| CAAGGTGTAGCAGTCAGAAG+TGG | + | chr3_2:13959772-13959791 | None:intergenic | 50.0% | |
| !! | AGGACTTGTTGTAAGGGACG+TGG | - | chr3_2:13960048-13960067 | Msa0396140:intron | 50.0% |
| ! | GGTGATGGTGAAGGTTGTTC+TGG | - | chr3_2:13960174-13960193 | Msa0396140:intron | 50.0% |
| ! | GCTACTAGCTCTTGTCACCA+AGG | - | chr3_2:13960291-13960310 | Msa0396140:intron | 50.0% |
| CAGAAGCTGTAGAGTCTCGA+TGG | - | chr3_2:13960501-13960520 | Msa0396140:intron | 50.0% | |
| CGTGTGACTATGTGAATGCG+TGG | - | chr3_2:13960876-13960895 | Msa0396140:intron | 50.0% | |
| CGGAGTTCAAACCCTGATGA+AGG | + | chr3_2:13961011-13961030 | None:intergenic | 50.0% | |
| ! | ATGGCTAGCTAGCAGAAGCA+GGG | + | chr3_2:13961481-13961500 | None:intergenic | 50.0% |
| ! | GAAGTGCTAGCTCGTAGGTA+TGG | - | chr3_2:13961647-13961666 | Msa0396140:intron | 50.0% |
| CTAGCTCGTAGGTATGGCAA+CGG | - | chr3_2:13961653-13961672 | Msa0396140:intron | 50.0% | |
| TAGCTCGTAGGTATGGCAAC+GGG | - | chr3_2:13961654-13961673 | Msa0396140:intron | 50.0% | |
| !!! | GTCAGGGATCGGTTTTAGAG+AGG | + | chr3_2:13961703-13961722 | None:intergenic | 50.0% |
| ATATCCATCCCCACCTTCGA+TGG | - | chr3_2:13961737-13961756 | Msa0396140:intron | 50.0% | |
| AACCTGACTCCATCGAAGGT+GGG | + | chr3_2:13961749-13961768 | None:intergenic | 50.0% | |
| AAACCTGACTCCATCGAAGG+TGG | + | chr3_2:13961750-13961769 | None:intergenic | 50.0% | |
| ACCGCAAACCCAAACCTATC+CGG | + | chr3_2:13961852-13961871 | None:intergenic | 50.0% | |
| ! | GATAGGTTTGGGTTTGCGGT+TGG | - | chr3_2:13961852-13961871 | Msa0396140:intron | 50.0% |
| ! | TTTGGGTTTGCGGTTGGAGT+AGG | - | chr3_2:13961858-13961877 | Msa0396140:intron | 50.0% |
| GATTAGGTGTGTCCTGGTGT+CGG | - | chr3_2:13961957-13961976 | Msa0396140:intron | 50.0% | |
| CACGATACATATCCGACACC+AGG | + | chr3_2:13961972-13961991 | None:intergenic | 50.0% | |
| TGAATGAACCCTCAAGGGTG+TGG | - | chr3_2:13962176-13962195 | Msa0396140:intron | 50.0% | |
| ! | GAATGAACCCTCAAGGGTGT+GGG | - | chr3_2:13962177-13962196 | Msa0396140:intron | 50.0% |
| ! | ATGGTGTGATGGGAAGTGTG+TGG | - | chr3_2:13962344-13962363 | Msa0396140:intron | 50.0% |
| ! | TGATGGGAAGTGTGTGGTGT+GGG | - | chr3_2:13962350-13962369 | Msa0396140:intron | 50.0% |
| GACAACCTTGGTCTACACCA+AGG | + | chr3_2:13964328-13964347 | None:intergenic | 50.0% | |
| ! | CAACCGTGAACTCGCTGATT+CGG | + | chr3_2:13964882-13964901 | None:intergenic | 50.0% |
| CAGCGAGTTCACGGTTGAAT+TGG | - | chr3_2:13964885-13964904 | Msa0396140:CDS | 50.0% | |
| !! | AGCTTCGTCGGTTCAATCTC+CGG | - | chr3_2:13965029-13965048 | Msa0396140:CDS | 50.0% |
| ! | CAATCTCCGGTCCGGTTTTT+AGG | - | chr3_2:13965042-13965061 | Msa0396140:CDS | 50.0% |
| GTAAGCAATTAGGGACTGGG+AGG | + | chr3_2:13965266-13965285 | None:intergenic | 50.0% | |
| GGATTCCTTCGACACGTCGT+CGG | - | chr3_2:13960103-13960122 | Msa0396140:intron | 55.0% | |
| GATTCCTTCGACACGTCGTC+GGG | - | chr3_2:13960104-13960123 | Msa0396140:intron | 55.0% | |
| TGACCATTAACCAGTGCCCC+CGG | - | chr3_2:13960609-13960628 | Msa0396140:intron | 55.0% | |
| GCTGGTGCATGAACATGACC+TGG | + | chr3_2:13961230-13961249 | None:intergenic | 55.0% | |
| ! | CATGGCTAGCTAGCAGAAGC+AGG | + | chr3_2:13961482-13961501 | None:intergenic | 55.0% |
| !! | GTGGAGAAGTGCTAGCTCGT+AGG | - | chr3_2:13961642-13961661 | Msa0396140:intron | 55.0% |
| AGCTCGTAGGTATGGCAACG+GGG | - | chr3_2:13961655-13961674 | Msa0396140:intron | 55.0% | |
| ACCTGACTCCATCGAAGGTG+GGG | + | chr3_2:13961748-13961767 | None:intergenic | 55.0% | |
| GGGAAACCTGACTCCATCGA+AGG | + | chr3_2:13961753-13961772 | None:intergenic | 55.0% | |
| ! | GCCGGATAGGTTTGGGTTTG+CGG | - | chr3_2:13961848-13961867 | Msa0396140:intron | 55.0% |
| GCATGGACACTCCTCGGATT+AGG | - | chr3_2:13961941-13961960 | Msa0396140:intron | 55.0% | |
| ! | TCCTCGGATTAGGTGTGTCC+TGG | - | chr3_2:13961951-13961970 | Msa0396140:intron | 55.0% |
| ACCAGGACACACCTAATCCG+AGG | + | chr3_2:13961955-13961974 | None:intergenic | 55.0% | |
| CACCGACAACAGACACGACA+TGG | + | chr3_2:13962070-13962089 | None:intergenic | 55.0% | |
| ! | GTGATGGGAAGTGTGTGGTG+TGG | - | chr3_2:13962349-13962368 | Msa0396140:intron | 55.0% |
| !! | GTGAACTCGCTGATTCGGTC+CGG | + | chr3_2:13964877-13964896 | None:intergenic | 55.0% |
| GGACCGAATCAGCGAGTTCA+CGG | - | chr3_2:13964876-13964895 | Msa0396140:CDS | 55.0% | |
| CTTCGACACGTCGTCGGGAA+CGG | - | chr3_2:13960109-13960128 | Msa0396140:intron | 60.0% | |
| TTCGACACGTCGTCGGGAAC+GGG | - | chr3_2:13960110-13960129 | Msa0396140:intron | 60.0% | |
| CGGGAGGTGGAGATGTTTGC+CGG | - | chr3_2:13960129-13960148 | Msa0396140:intron | 60.0% | |
| GAGGTGGAGATGTTTGCCGG+TGG | - | chr3_2:13960132-13960151 | Msa0396140:intron | 60.0% | |
| GTGGAGATGTTTGCCGGTGG+TGG | - | chr3_2:13960135-13960154 | Msa0396140:intron | 60.0% | |
| ! | GAGATGTTTGCCGGTGGTGG+TGG | - | chr3_2:13960138-13960157 | Msa0396140:intron | 60.0% |
| !! | ATGTTTGCCGGTGGTGGTGG+TGG | - | chr3_2:13960141-13960160 | Msa0396140:intron | 60.0% |
| !! | GGTGGTGGTGGTGATGGTGA+AGG | - | chr3_2:13960165-13960184 | Msa0396140:intron | 60.0% |
| TCGTAGGTATGGCAACGGGG+TGG | - | chr3_2:13961658-13961677 | Msa0396140:intron | 60.0% | |
| GTATGGCAACGGGGTGGTCA+GGG | - | chr3_2:13961664-13961683 | Msa0396140:intron | 60.0% | |
| TATGGCAACGGGGTGGTCAG+GGG | - | chr3_2:13961665-13961684 | Msa0396140:intron | 60.0% | |
| GACTCCATCGAAGGTGGGGA+TGG | + | chr3_2:13961744-13961763 | None:intergenic | 60.0% | |
| TCCCCACCTTCGATGGAGTC+AGG | - | chr3_2:13961744-13961763 | Msa0396140:intron | 60.0% | |
| GGGGATGGGGATGACGATGA+AGG | + | chr3_2:13961892-13961911 | None:intergenic | 60.0% | |
| CAATGGGCCCACACCCTTGA+GGG | + | chr3_2:13962187-13962206 | None:intergenic | 60.0% | |
| ACAATGGGCCCACACCCTTG+AGG | + | chr3_2:13962188-13962207 | None:intergenic | 60.0% | |
| !! | CGTCGGTTCAATCTCCGGTC+CGG | - | chr3_2:13965034-13965053 | Msa0396140:CDS | 60.0% |
| CGTTCCCGACGACGTGTCGA+AGG | + | chr3_2:13960111-13960130 | None:intergenic | 65.0% | |
| !! | TTTGCCGGTGGTGGTGGTGG+TGG | - | chr3_2:13960144-13960163 | Msa0396140:intron | 65.0% |
| ACCACCACCACCACCACCAC+CGG | + | chr3_2:13960151-13960170 | None:intergenic | 65.0% | |
| !! | GGTGGTGGTGGTGGTGGTGA+TGG | - | chr3_2:13960159-13960178 | Msa0396140:intron | 65.0% |
| !! | GTGCCGGGGGCACTGGTTAA+TGG | + | chr3_2:13960615-13960634 | None:intergenic | 65.0% |
| TTAACCAGTGCCCCCGGCAC+CGG | - | chr3_2:13960615-13960634 | Msa0396140:intron | 65.0% | |
| TTAACCAGTGCCCCCGGTGC+CGG | + | chr3_2:13960631-13960650 | None:intergenic | 65.0% | |
| GGTATGGCAACGGGGTGGTC+AGG | - | chr3_2:13961663-13961682 | Msa0396140:intron | 65.0% | |
| GACACGTCGTCGGGAACGGG+AGG | - | chr3_2:13960113-13960132 | Msa0396140:intron | 70.0% | |
| ACGTCGTCGGGAACGGGAGG+TGG | - | chr3_2:13960116-13960135 | Msa0396140:intron | 70.0% | |
| !! | GGTGGTGGTGGTGGTGGTGG+TGG | - | chr3_2:13960150-13960169 | Msa0396140:intron | 70.0% |
| !! | GGTGGTGGTGGTGGTGGTGG+TGG | - | chr3_2:13960150-13960169 | Msa0396140:intron | 70.0% |
| TAACCAGTGCCCCCGGCACC+GGG | - | chr3_2:13960616-13960635 | Msa0396140:intron | 70.0% | |
| TAACCAGTGCCCCCGGTGCC+GGG | + | chr3_2:13960630-13960649 | None:intergenic | 70.0% | |
| !! | GCCGGTGGTGGTGGTGGTGG+TGG | - | chr3_2:13960147-13960166 | Msa0396140:intron | 75.0% |
| AACCAGTGCCCCCGGCACCG+GGG | - | chr3_2:13960617-13960636 | Msa0396140:intron | 75.0% | |
| ! | AACCAGTGCCCCCGGTGCCG+GGG | + | chr3_2:13960629-13960648 | None:intergenic | 75.0% |
| !! | ACCAGTGCCCCCGGCACCGG+GGG | - | chr3_2:13960618-13960637 | Msa0396140:intron | 80.0% |
| !! | ACCAGTGCCCCCGGTGCCGG+GGG | + | chr3_2:13960628-13960647 | None:intergenic | 80.0% |
| !! | GCCCCCGGTGCCGGGGGCAC+TGG | + | chr3_2:13960622-13960641 | None:intergenic | 90.0% |
| !! | GCCCCCGGCACCGGGGGCAC+TGG | - | chr3_2:13960624-13960643 | Msa0396140:intron | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 13959424 | 13965460 | 13959424 | ID=Msa0396140;Name=Msa0396140 |
| chr3_2 | mRNA | 13959424 | 13965460 | 13959424 | ID=Msa0396140-mRNA-1;Parent=Msa0396140;Name=Msa0396140-mRNA-1;_AED=0.00;_eAED=0.00;_QI=165|1|1|1|0.5|0.33|3|318|338 |
| chr3_2 | exon | 13959424 | 13959721 | 13959424 | ID=Msa0396140-mRNA-1:exon:3207;Parent=Msa0396140-mRNA-1 |
| chr3_2 | exon | 13963368 | 13963680 | 13963368 | ID=Msa0396140-mRNA-1:exon:3206;Parent=Msa0396140-mRNA-1 |
| chr3_2 | exon | 13964572 | 13965460 | 13964572 | ID=Msa0396140-mRNA-1:exon:3205;Parent=Msa0396140-mRNA-1 |
| chr3_2 | five_prime_UTR | 13965296 | 13965460 | 13965296 | ID=Msa0396140-mRNA-1:five_prime_utr;Parent=Msa0396140-mRNA-1 |
| chr3_2 | CDS | 13964572 | 13965295 | 13964572 | ID=Msa0396140-mRNA-1:cds;Parent=Msa0396140-mRNA-1 |
| chr3_2 | CDS | 13963388 | 13963680 | 13963388 | ID=Msa0396140-mRNA-1:cds;Parent=Msa0396140-mRNA-1 |
| chr3_2 | three_prime_UTR | 13963368 | 13963387 | 13963368 | ID=Msa0396140-mRNA-1:three_prime_utr;Parent=Msa0396140-mRNA-1 |
| chr3_2 | three_prime_UTR | 13959424 | 13959721 | 13959424 | ID=Msa0396140-mRNA-1:three_prime_utr;Parent=Msa0396140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
