Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0421990 | XP_003601810.1 | 97.523 | 767 | 19 | 0 | 1 | 767 | 2 | 768 | 0.0 | 1536 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0421990 | sp|Q12955|ANK3_HUMAN | 24.407 | 590 | 351 | 17 | 85 | 632 | 268 | 804 | 3.13e-27 | 123 |
| Msa0421990 | sp|Q12955|ANK3_HUMAN | 23.955 | 718 | 440 | 21 | 30 | 671 | 48 | 735 | 1.66e-25 | 117 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0421990 | G7JC18 | 97.523 | 767 | 19 | 0 | 1 | 767 | 2 | 768 | 0.0 | 1536 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0373430 | Msa0421990 | 0.967266 | 4.845453e-127 | -8.615850e-47 |
| Msa0421990 | Msa0480020 | 0.959175 | 3.743641e-117 | -8.615850e-47 |
| Msa0421990 | Msa0514400 | 0.917478 | 5.057337e-86 | -8.615850e-47 |
| Msa0357340 | Msa0421990 | 0.813558 | 2.408105e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0421990 | MtrunA17_Chr3g0122751 | 97.523 | 767 | 19 | 0 | 1 | 767 | 2 | 768 | 0.0 | 1536 |
| Msa0421990 | MtrunA17_Chr7g0226271 | 58.445 | 746 | 300 | 6 | 12 | 756 | 7 | 743 | 0.0 | 850 |
| Msa0421990 | MtrunA17_Chr6g0461061 | 23.510 | 302 | 184 | 9 | 281 | 549 | 167 | 454 | 2.65e-12 | 70.1 |
| Msa0421990 | MtrunA17_Chr5g0418551 | 33.562 | 146 | 88 | 4 | 483 | 628 | 90 | 226 | 5.86e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0421990 | AT5G14230.1 | 54.594 | 751 | 328 | 7 | 12 | 761 | 7 | 745 | 0.0 | 779 |
| Msa0421990 | AT5G14230.2 | 53.769 | 597 | 263 | 7 | 166 | 761 | 1 | 585 | 0.0 | 592 |
Find 139 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTGAATATGCCCTTAAAA+AGG | 0.174977 | 3_2:+71052642 | Msa0421990:CDS |
| ATTCTTCGGTGTTTGATTAA+TGG | 0.185908 | 3_2:+71052103 | Msa0421990:CDS |
| CTTCCAATGTGGAAACTATT+AGG | 0.253098 | 3_2:-71051929 | None:intergenic |
| GGAAGGCCATTTGAAAATAT+TGG | 0.260482 | 3_2:+71050220 | Msa0421990:CDS |
| CTAGATATCAAGGTCAAATT+AGG | 0.280904 | 3_2:+71051764 | Msa0421990:CDS |
| GAACCAAAATGGTGAAAATA+AGG | 0.285531 | 3_2:+71052600 | Msa0421990:CDS |
| AGTTTATCAGAAAGCAATTC+TGG | 0.286349 | 3_2:+71052300 | Msa0421990:CDS |
| AAGCACGATCTCCATTGTTT+TGG | 0.289357 | 3_2:-71048974 | None:intergenic |
| CTCATAGACTTGAACCAAAA+TGG | 0.291322 | 3_2:+71052589 | Msa0421990:CDS |
| AAGTTTGATGTTGATGAGTT+AGG | 0.314790 | 3_2:+71053162 | Msa0421990:CDS |
| CTTCACCGAGCAGCTTGTTA+TGG | 0.321590 | 3_2:+71052703 | Msa0421990:CDS |
| TTGGTGGATGTTAACTTCAT+TGG | 0.328128 | 3_2:+71048934 | Msa0421990:CDS |
| TCAAATTAGGAGCTTGGTCT+TGG | 0.331293 | 3_2:+71051777 | Msa0421990:CDS |
| TTTGGTTCTAGAGCTAATAC+TGG | 0.362349 | 3_2:+71053300 | Msa0421990:CDS |
| GTTCATCTAGATTTATATTC+CGG | 0.369226 | 3_2:-71052435 | None:intergenic |
| TTGGACTCACAAACAAAGTT+TGG | 0.371352 | 3_2:+71052136 | Msa0421990:CDS |
| GGGTTGAAATGGCTGAGTTA+TGG | 0.373265 | 3_2:+71053241 | Msa0421990:CDS |
| TGTAAATGTGAGATTGTTCC+GGG | 0.373790 | 3_2:+71050172 | Msa0421990:CDS |
| ATCTCTGTTTCGTAGTCAAT+TGG | 0.376161 | 3_2:-71048841 | None:intergenic |
| ATGTAAATGTGAGATTGTTC+CGG | 0.388075 | 3_2:+71050171 | Msa0421990:CDS |
| AGTCGCGCAGCCATGTGAAT+AGG | 0.389655 | 3_2:-71052067 | None:intergenic |
| TTGGATCATGCAACATTCTT+CGG | 0.392048 | 3_2:+71052089 | Msa0421990:CDS |
| GGTTGAAATGGCTGAGTTAT+GGG | 0.394310 | 3_2:+71053242 | Msa0421990:CDS |
| TGTAGTTAGACTACTGTTGC+AGG | 0.401334 | 3_2:+71051150 | Msa0421990:CDS |
| ATTCACATGGCTGCGCGACT+TGG | 0.408350 | 3_2:+71052070 | Msa0421990:CDS |
| ATGGCTGAGTTATGGGTAAG+AGG | 0.413141 | 3_2:+71053249 | Msa0421990:CDS |
| TGTTTCCTTAGCCCTGTACT+AGG | 0.421197 | 3_2:-71048811 | None:intergenic |
| ATTACCAATTGTTTCTTATG+TGG | 0.423272 | 3_2:-71053030 | None:intergenic |
| TGGCTGAGTTATGGGTAAGA+GGG | 0.432048 | 3_2:+71053250 | Msa0421990:CDS |
| TTGTGAAGGTGGGGTTGAAA+TGG | 0.432096 | 3_2:+71053230 | Msa0421990:CDS |
| AAGAAACAATTGGTAATGAT+TGG | 0.433525 | 3_2:+71053036 | Msa0421990:CDS |
| GTCGCGCAGCCATGTGAATA+GGG | 0.441194 | 3_2:-71052066 | None:intergenic |
| AAGAAATGTTGTTTGTAAAG+AGG | 0.443386 | 3_2:+71053095 | Msa0421990:CDS |
| TATTTGCTGCTGTGGTCAGC+AGG | 0.443955 | 3_2:+71051119 | Msa0421990:CDS |
| GATTAATGGTAAGTGTAAGT+TGG | 0.444723 | 3_2:+71052117 | Msa0421990:CDS |
| CTTGTCTCTGCTTGTTGCAG+AGG | 0.445183 | 3_2:+71050380 | Msa0421990:CDS |
| AACATACAAAATGTGGTAAA+GGG | 0.451192 | 3_2:+71053004 | Msa0421990:CDS |
| TCAACATTAGCGTGAAGAAA+TGG | 0.452245 | 3_2:-71051085 | None:intergenic |
| GGGTAACGTGGAAGCTTTCA+AGG | 0.453069 | 3_2:+71052501 | Msa0421990:CDS |
| AAACATACAAAATGTGGTAA+AGG | 0.454523 | 3_2:+71053003 | Msa0421990:CDS |
| TCTACAGCACACCATGTGAT+TGG | 0.456993 | 3_2:-71051854 | None:intergenic |
| ATTCTGGATATAATTAGATC+TGG | 0.458790 | 3_2:+71052316 | Msa0421990:CDS |
| GACTCTAATTCGTAAGCTGC+TGG | 0.462966 | 3_2:+71049089 | Msa0421990:CDS |
| TCTCTTGCTGCTAACATCAA+TGG | 0.465497 | 3_2:-71052802 | None:intergenic |
| GAAGGGTATTATGATGTGAA+TGG | 0.467144 | 3_2:+71052757 | Msa0421990:CDS |
| CAAATTAGGAGCTTGGTCTT+GGG | 0.472134 | 3_2:+71051778 | Msa0421990:CDS |
| AGTATCATCAGGAGCTGACT+TGG | 0.473154 | 3_2:+71052216 | Msa0421990:CDS |
| GAAGAATTTCGTGTAGGTGT+TGG | 0.491534 | 3_2:+71051815 | Msa0421990:CDS |
| GTATCATCAGGAGCTGACTT+GGG | 0.496179 | 3_2:+71052217 | Msa0421990:CDS |
| CGGCATTGATGATTTGTACA+AGG | 0.498203 | 3_2:+71052164 | Msa0421990:CDS |
| TCTTTCATTGTTACACATGA+TGG | 0.498969 | 3_2:-71051969 | None:intergenic |
| TTTAAGTAATGGTGTGGATA+CGG | 0.499496 | 3_2:+71052006 | Msa0421990:CDS |
| TTGGTAATGATTGGTGCTGC+TGG | 0.499601 | 3_2:+71053045 | Msa0421990:CDS |
| GCACACCATGTGATTGGATA+AGG | 0.500807 | 3_2:-71051848 | None:intergenic |
| TACTGAAGTTGCGCAATGAC+CGG | 0.504102 | 3_2:-71052254 | None:intergenic |
| TCAAGGTCAAATTAGGAGCT+TGG | 0.504271 | 3_2:+71051771 | Msa0421990:CDS |
| CAATGCATTATTTGCTGCTG+TGG | 0.507461 | 3_2:+71051111 | Msa0421990:CDS |
| GCGACGCCCCACCATTGATA+AGG | 0.507974 | 3_2:-71050247 | None:intergenic |
| GTATGAAGAGTTTAAAATTG+AGG | 0.511045 | 3_2:+71049029 | Msa0421990:CDS |
| AAGATTGATTACATCAGCTC+CGG | 0.511891 | 3_2:-71052536 | None:intergenic |
| CAAAGGAAATGATGCAGAGC+GGG | 0.513044 | 3_2:+71052927 | Msa0421990:CDS |
| TGGATTCGCTAAACATTCAA+TGG | 0.514214 | 3_2:-71048911 | None:intergenic |
| TTCAAGGTACTTCTTCATGC+CGG | 0.516258 | 3_2:+71052517 | Msa0421990:CDS |
| TTCCATCGAAATCTTTCACT+TGG | 0.516599 | 3_2:-71053129 | None:intergenic |
| GTCGCCACATAAGAAACAAT+TGG | 0.518627 | 3_2:+71053026 | Msa0421990:CDS |
| GATATAATTAGATCTGGAAA+AGG | 0.519776 | 3_2:+71052322 | Msa0421990:CDS |
| TGTGGAAACTATTAGGTGAC+AGG | 0.527496 | 3_2:-71051922 | None:intergenic |
| CTCTGCAACAAGCAGAGACA+AGG | 0.528740 | 3_2:-71050379 | None:intergenic |
| TGTTGTTTGTAAAGAGGCTG+AGG | 0.529305 | 3_2:+71053101 | Msa0421990:CDS |
| TGGTCTTGGGAAACAGATAC+AGG | 0.531451 | 3_2:+71051791 | Msa0421990:CDS |
| GCGTTGGTGAGTCCTAGTAC+AGG | 0.537434 | 3_2:+71048799 | Msa0421990:CDS |
| TGCTACAACAGCAGCAGTGA+GGG | 0.545172 | 3_2:+71050199 | Msa0421990:CDS |
| TTACTTGAAGCAAGCTATGT+GGG | 0.546833 | 3_2:+71050290 | Msa0421990:CDS |
| TGGAGGTCCTTATCAATGGT+GGG | 0.547063 | 3_2:+71050240 | Msa0421990:CDS |
| CAACATCAAACTTCTTCCTA+CGG | 0.548005 | 3_2:-71053152 | None:intergenic |
| TCTAGAGCTAATACTGGCTG+AGG | 0.551926 | 3_2:+71053306 | Msa0421990:CDS |
| TGGTGTAAGACTAGATATCA+AGG | 0.554150 | 3_2:+71051754 | Msa0421990:CDS |
| TAACAAGCTGCTCGGTGAAG+AGG | 0.560472 | 3_2:-71052700 | None:intergenic |
| GGTTGTTGATGTACTCATCA+AGG | 0.562299 | 3_2:+71050412 | Msa0421990:CDS |
| AATATTAGTACTTTAACCGA+GGG | 0.563629 | 3_2:+71052673 | Msa0421990:CDS |
| GGTTTGTTTGCAGCATGGAG+TGG | 0.566933 | 3_2:+71051021 | Msa0421990:intron |
| TTGGAGGTCCTTATCAATGG+TGG | 0.567906 | 3_2:+71050239 | Msa0421990:CDS |
| CATTGTTACACATGATGGTG+TGG | 0.569124 | 3_2:-71051964 | None:intergenic |
| ATATTGGAGGTCCTTATCAA+TGG | 0.569895 | 3_2:+71050236 | Msa0421990:CDS |
| CTAGATGAACAAAACGCGAA+TGG | 0.572314 | 3_2:+71052448 | Msa0421990:CDS |
| TTTACTTGAAGCAAGCTATG+TGG | 0.573064 | 3_2:+71050289 | Msa0421990:CDS |
| GTCATGATAGCTGCCGCAGA+GGG | 0.576593 | 3_2:+71052481 | Msa0421990:CDS |
| TTGGGGATAGTAAATTCGTC+CGG | 0.577097 | 3_2:+71052235 | Msa0421990:CDS |
| GAATATTAGTACTTTAACCG+AGG | 0.578648 | 3_2:+71052672 | Msa0421990:CDS |
| AGGCCATTTGAAAATATTGG+AGG | 0.582676 | 3_2:+71050223 | Msa0421990:CDS |
| AGCTGCCGCAGAGGGTAACG+TGG | 0.588395 | 3_2:+71052489 | Msa0421990:CDS |
| CAATGTACACCCTATTCACA+TGG | 0.589994 | 3_2:+71052057 | Msa0421990:CDS |
| TACACTGAATTTACTCGATG+AGG | 0.593045 | 3_2:-71049009 | None:intergenic |
| GTTTGTAAAGAGGCTGAGGT+AGG | 0.597465 | 3_2:+71053105 | Msa0421990:CDS |
| CACTCGAGCGAATGACATAG+AGG | 0.598935 | 3_2:+71052390 | Msa0421990:CDS |
| CTGCTGTTGTAGCATAGCCC+CGG | 0.599857 | 3_2:-71050190 | None:intergenic |
| TTAGCAGCAAGAGAAAGTAA+TGG | 0.601878 | 3_2:+71052811 | Msa0421990:CDS |
| GGAGGTCCTTATCAATGGTG+GGG | 0.602282 | 3_2:+71050241 | Msa0421990:CDS |
| TGGATGTTAATGCAATGGAT+AGG | 0.603440 | 3_2:+71051041 | Msa0421990:CDS |
| ATGTTTAGCGAATCCATTGG+TGG | 0.603618 | 3_2:+71048918 | Msa0421990:CDS |
| CATGTTGAGTATAGTACCAG+TGG | 0.606160 | 3_2:-71051888 | None:intergenic |
| CTTGCTAGAGAAAATAACAA+AGG | 0.606392 | 3_2:+71052910 | Msa0421990:CDS |
| GATGTTGAAGTCCAAAACAA+TGG | 0.608066 | 3_2:+71048963 | Msa0421990:CDS |
| TGAGTCCTAGTACAGGGCTA+AGG | 0.609927 | 3_2:+71048806 | Msa0421990:CDS |
| TGAATGTTTAGCGAATCCAT+TGG | 0.610245 | 3_2:+71048915 | Msa0421990:CDS |
| TCACCTAATAGTTTCCACAT+TGG | 0.614105 | 3_2:+71051926 | Msa0421990:CDS |
| TATCATCAGGAGCTGACTTG+GGG | 0.619391 | 3_2:+71052218 | Msa0421990:CDS |
| GACCAAGTGAAAGATTTCGA+TGG | 0.625666 | 3_2:+71053127 | Msa0421990:CDS |
| TGGAGTGGATGTTAATGCAA+TGG | 0.627216 | 3_2:+71051036 | Msa0421990:CDS |
| CATGTATTGCAACACGAGGA+CGG | 0.631502 | 3_2:-71050355 | None:intergenic |
| ACAAACAAAGTTTGGTGACA+CGG | 0.631687 | 3_2:+71052144 | Msa0421990:CDS |
| ATGAAGTTAACATCCACCAA+TGG | 0.633936 | 3_2:-71048931 | None:intergenic |
| CATGTGAATAGGGTGTACAT+TGG | 0.634202 | 3_2:-71052056 | None:intergenic |
| ACAACAGCAGCAGTGAGGGA+AGG | 0.634576 | 3_2:+71050203 | Msa0421990:CDS |
| AAAGATTTCGATGGAACCGT+AGG | 0.636964 | 3_2:+71053136 | Msa0421990:CDS |
| GTCGCAACTTGCATGCGAAG+AGG | 0.636970 | 3_2:+71050265 | Msa0421990:CDS |
| TGTCATGATAGCTGCCGCAG+AGG | 0.638941 | 3_2:+71052480 | Msa0421990:CDS |
| CTGAGCCTTATCCAATCACA+TGG | 0.641426 | 3_2:+71051843 | Msa0421990:CDS |
| CGTTGGTGAGTCCTAGTACA+GGG | 0.644162 | 3_2:+71048800 | Msa0421990:CDS |
| TGTCTCCATAACAAGCTGCT+CGG | 0.646022 | 3_2:-71052708 | None:intergenic |
| ACAAAGGAAATGATGCAGAG+CGG | 0.647414 | 3_2:+71052926 | Msa0421990:CDS |
| AACACGAGGACGGATCATGT+TGG | 0.649295 | 3_2:-71050345 | None:intergenic |
| ACAGGAGAAGAATTTCGTGT+AGG | 0.653770 | 3_2:+71051809 | Msa0421990:CDS |
| GCAAGAGAGTTCTTCCAATG+TGG | 0.656913 | 3_2:-71051940 | None:intergenic |
| TCTGCAACAAGCAGAGACAA+GGG | 0.657171 | 3_2:-71050378 | None:intergenic |
| AGCTTCCACGTTACCCTCTG+CGG | 0.660367 | 3_2:-71052494 | None:intergenic |
| CTAGAGCTAATACTGGCTGA+GGG | 0.661333 | 3_2:+71053307 | Msa0421990:CDS |
| GGATGTTAACTTCATTGGAA+CGG | 0.666070 | 3_2:+71048939 | Msa0421990:CDS |
| GATGAGTACATCAACAACCT+CGG | 0.687569 | 3_2:-71050408 | None:intergenic |
| ATGCTACAACAGCAGCAGTG+AGG | 0.688425 | 3_2:+71050198 | Msa0421990:CDS |
| AATTTCATGTGATAGAATGT+GGG | 0.694020 | 3_2:+71050143 | Msa0421990:intron |
| GTGAAGAAACATACAAAATG+TGG | 0.694360 | 3_2:+71052997 | Msa0421990:CDS |
| TCGGTGAAGAGGATTCCCCT+CGG | 0.695815 | 3_2:-71052689 | None:intergenic |
| GCTAGAATAGTAGTGTTGTG+TGG | 0.706489 | 3_2:+71052967 | Msa0421990:CDS |
| CTTGTTGATGCAGCTCATCG+CGG | 0.711378 | 3_2:+71048874 | Msa0421990:CDS |
| ATATTAGTACTTTAACCGAG+GGG | 0.718701 | 3_2:+71052674 | Msa0421990:CDS |
| GTAAATGTGAGATTGTTCCG+GGG | 0.747988 | 3_2:+71050173 | Msa0421990:CDS |
| AGGGCATGTATTGCAACACG+AGG | 0.751125 | 3_2:-71050359 | None:intergenic |
| TTGTTGCAGAGGATTCACCG+AGG | 0.802394 | 3_2:+71050391 | Msa0421990:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAACTGATTTTTTTTTTTT+TGG | + | chr3_2:71049532-71049551 | Msa0421990:intron | 10.0% |
| !! | TTATAAACATAATTACATAT+TGG | - | chr3_2:71049685-71049704 | None:intergenic | 10.0% |
| !! | ATATAATTACATTTATTTGA+GGG | - | chr3_2:71050496-71050515 | None:intergenic | 10.0% |
| !! | AATATAATTACATTTATTTG+AGG | - | chr3_2:71050497-71050516 | None:intergenic | 10.0% |
| !! | AAACTAATATTAATCTAATA+CGG | - | chr3_2:71051523-71051542 | None:intergenic | 10.0% |
| !! | TTGAAAAATTATTAAAAGAA+GGG | + | chr3_2:71052740-71052759 | Msa0421990:CDS | 10.0% |
| !! | AAAAAAAGAAAGAAGATAAA+TGG | - | chr3_2:71049846-71049865 | None:intergenic | 15.0% |
| !!! | AATTCAATTTAGAGTTAAAA+GGG | - | chr3_2:71049998-71050017 | None:intergenic | 15.0% |
| !!! | AAATTCAATTTAGAGTTAAA+AGG | - | chr3_2:71049999-71050018 | None:intergenic | 15.0% |
| !! | AAAACTTAGTTAATAATGAA+TGG | - | chr3_2:71050120-71050139 | None:intergenic | 15.0% |
| !!! | ATTCATTATTAACTAAGTTT+TGG | + | chr3_2:71050119-71050138 | Msa0421990:intron | 15.0% |
| !!! | TTCATTATTAACTAAGTTTT+GGG | + | chr3_2:71050120-71050139 | Msa0421990:intron | 15.0% |
| !! | TATAATTACATTTATTTGAG+GGG | - | chr3_2:71050495-71050514 | None:intergenic | 15.0% |
| !! | AATATATTACATTTAGTTGA+GGG | - | chr3_2:71050574-71050593 | None:intergenic | 15.0% |
| !! | ATATGATTATATTTAGTTGA+GGG | - | chr3_2:71050651-71050670 | None:intergenic | 15.0% |
| !! | AATATGATTATATTTAGTTG+AGG | - | chr3_2:71050652-71050671 | None:intergenic | 15.0% |
| !!! | GTTATTTGATTTAGTAAAAA+AGG | + | chr3_2:71050810-71050829 | Msa0421990:intron | 15.0% |
| !! | TAGTAATCAATTATATTCAT+AGG | - | chr3_2:71050984-71051003 | None:intergenic | 15.0% |
| !! | TAATAATTGATTAATTGTGT+TGG | + | chr3_2:71051238-71051257 | Msa0421990:intron | 15.0% |
| !!! | ATTTTAATTTGTTGAACTTT+TGG | + | chr3_2:71051287-71051306 | Msa0421990:intron | 15.0% |
| !!! | TTTTAATTTGTTGAACTTTT+GGG | + | chr3_2:71051288-71051307 | Msa0421990:intron | 15.0% |
| !!! | TTGAATATACTTTTAAGTAA+TGG | + | chr3_2:71051995-71052014 | Msa0421990:CDS | 15.0% |
| !! | ATCAATCTTAAAAACAAATA+TGG | + | chr3_2:71052550-71052569 | Msa0421990:CDS | 15.0% |
| !!! | AAATAAGGAAAATTTTCATA+AGG | + | chr3_2:71052615-71052634 | Msa0421990:CDS | 15.0% |
| !! | GTTGAAAAATTATTAAAAGA+AGG | + | chr3_2:71052739-71052758 | Msa0421990:CDS | 15.0% |
| !!! | ATTTTCGAAAACACAAAATA+AGG | - | chr3_2:71049139-71049158 | None:intergenic | 20.0% |
| !! | ATATTTCAACAATGTTAGTA+AGG | + | chr3_2:71049584-71049603 | Msa0421990:intron | 20.0% |
| !!! | TTTTTCTATCCTTATTCTTT+CGG | + | chr3_2:71049779-71049798 | Msa0421990:intron | 20.0% |
| !! | TCATAACATTTAAATGTGTT+CGG | - | chr3_2:71049877-71049896 | None:intergenic | 20.0% |
| !! | ACATACACTAGTAATTATAA+TGG | - | chr3_2:71050443-71050462 | None:intergenic | 20.0% |
| !! | ATATATTACATTTAGTTGAG+GGG | - | chr3_2:71050573-71050592 | None:intergenic | 20.0% |
| !! | GAATATATTACATTTAGTTG+AGG | - | chr3_2:71050575-71050594 | None:intergenic | 20.0% |
| !! | TATGATTATATTTAGTTGAG+GGG | - | chr3_2:71050650-71050669 | None:intergenic | 20.0% |
| !! | TTATAAATGATAGAACCAAT+AGG | - | chr3_2:71050753-71050772 | None:intergenic | 20.0% |
| !! | TTATTAAAGAATATACGTAG+GGG | - | chr3_2:71050900-71050919 | None:intergenic | 20.0% |
| !! | CTTATTAAAGAATATACGTA+GGG | - | chr3_2:71050901-71050920 | None:intergenic | 20.0% |
| !! | TCTTATTAAAGAATATACGT+AGG | - | chr3_2:71050902-71050921 | None:intergenic | 20.0% |
| !!! | GTGTTTTCTTTTAAAATTTC+AGG | + | chr3_2:71050925-71050944 | Msa0421990:intron | 20.0% |
| !! | ATAAGTAATAAACTTCACAT+GGG | + | chr3_2:71051189-71051208 | Msa0421990:intron | 20.0% |
| !! | AATGTGATATTAAAAATGAG+AGG | + | chr3_2:71052869-71052888 | Msa0421990:CDS | 20.0% |
| !! | GTATGAAGAGTTTAAAATTG+AGG | + | chr3_2:71049029-71049048 | Msa0421990:CDS | 25.0% |
| !!! | GATTATTTGAAACGTGATTT+TGG | + | chr3_2:71049178-71049197 | Msa0421990:intron | 25.0% |
| ! | GAAAACAGTTAAAAATGTGA+CGG | + | chr3_2:71049436-71049455 | Msa0421990:intron | 25.0% |
| ! | AAAAATCAGTTTAGAAACCA+GGG | - | chr3_2:71049525-71049544 | None:intergenic | 25.0% |
| ! | AAAAAATCAGTTTAGAAACC+AGG | - | chr3_2:71049526-71049545 | None:intergenic | 25.0% |
| ! | AATGTTAGTAAGGCAATAAT+TGG | + | chr3_2:71049594-71049613 | Msa0421990:intron | 25.0% |
| !!! | GTTGGATTTATTTTCATGTA+TGG | + | chr3_2:71049740-71049759 | Msa0421990:intron | 25.0% |
| ! | TTGGATAGAAAGATCAAATA+TGG | - | chr3_2:71049814-71049833 | None:intergenic | 25.0% |
| ! | AGATAAATGGAATTTAGTGT+TGG | - | chr3_2:71049833-71049852 | None:intergenic | 25.0% |
| !! | ATTACTAATTTGTCTGATGT+AGG | + | chr3_2:71049936-71049955 | Msa0421990:intron | 25.0% |
| ! | AATTTCATGTGATAGAATGT+GGG | + | chr3_2:71050143-71050162 | Msa0421990:intron | 25.0% |
| ! | ATGGATACATTTATAAGTCA+AGG | + | chr3_2:71050539-71050558 | Msa0421990:intron | 25.0% |
| ! | AAAATTGCTACACCAAAATT+TGG | + | chr3_2:71050871-71050890 | Msa0421990:intron | 25.0% |
| !!! | TACTAAATGACACTTTTTCT+TGG | + | chr3_2:71050999-71051018 | Msa0421990:intron | 25.0% |
| !!! | ACTAAATGACACTTTTTCTT+GGG | + | chr3_2:71051000-71051019 | Msa0421990:intron | 25.0% |
| ! | GATAAGTAATAAACTTCACA+TGG | + | chr3_2:71051188-71051207 | Msa0421990:intron | 25.0% |
| ! | AATACCAGACAATATGTTAA+AGG | - | chr3_2:71051361-71051380 | None:intergenic | 25.0% |
| !! | CCTTACAAATCAATTTTGTA+CGG | - | chr3_2:71051387-71051406 | None:intergenic | 25.0% |
| ! | AAGAGGATATGTTGAAAAAA+GGG | - | chr3_2:71051432-71051451 | None:intergenic | 25.0% |
| ! | TAAGAGGATATGTTGAAAAA+AGG | - | chr3_2:71051433-71051452 | None:intergenic | 25.0% |
| !! | TTTTTCTCTTTATAAACACG+TGG | + | chr3_2:71051576-71051595 | Msa0421990:intron | 25.0% |
| !! | TTTTCTCTTTATAAACACGT+GGG | + | chr3_2:71051577-71051596 | Msa0421990:intron | 25.0% |
| !!! | TATACTTTTAAGTAATGGTG+TGG | + | chr3_2:71052000-71052019 | Msa0421990:CDS | 25.0% |
| ! | ATTCTGGATATAATTAGATC+TGG | + | chr3_2:71052316-71052335 | Msa0421990:CDS | 25.0% |
| ! | GATATAATTAGATCTGGAAA+AGG | + | chr3_2:71052322-71052341 | Msa0421990:CDS | 25.0% |
| ! | GTTCATCTAGATTTATATTC+CGG | - | chr3_2:71052438-71052457 | None:intergenic | 25.0% |
| !!! | TTTCCTTATTTTCACCATTT+TGG | - | chr3_2:71052606-71052625 | None:intergenic | 25.0% |
| ! | TTTGAATATGCCCTTAAAAA+GGG | + | chr3_2:71052643-71052662 | Msa0421990:CDS | 25.0% |
| ! | AATATTAGTACTTTAACCGA+GGG | + | chr3_2:71052673-71052692 | Msa0421990:CDS | 25.0% |
| !!! | TGTGAGATTTTGATATCTTA+CGG | + | chr3_2:71052841-71052860 | Msa0421990:CDS | 25.0% |
| ! | AAACATACAAAATGTGGTAA+AGG | + | chr3_2:71053003-71053022 | Msa0421990:CDS | 25.0% |
| ! | AACATACAAAATGTGGTAAA+GGG | + | chr3_2:71053004-71053023 | Msa0421990:CDS | 25.0% |
| !! | ATTACCAATTGTTTCTTATG+TGG | - | chr3_2:71053033-71053052 | None:intergenic | 25.0% |
| !!! | AAGAAACAATTGGTAATGAT+TGG | + | chr3_2:71053036-71053055 | Msa0421990:CDS | 25.0% |
| !! | AAGAAATGTTGTTTGTAAAG+AGG | + | chr3_2:71053095-71053114 | Msa0421990:CDS | 25.0% |
| ! | TGTTGTTACTGCAAAAAATA+AGG | + | chr3_2:71053194-71053213 | Msa0421990:CDS | 25.0% |
| ACAAAATAAGGCAGAACATT+CGG | - | chr3_2:71049127-71049146 | None:intergenic | 30.0% | |
| GATTACAACAGTGATAATCA+TGG | - | chr3_2:71049204-71049223 | None:intergenic | 30.0% | |
| TCACATGTCATTGATACATT+GGG | - | chr3_2:71049488-71049507 | None:intergenic | 30.0% | |
| TTCACATGTCATTGATACAT+TGG | - | chr3_2:71049489-71049508 | None:intergenic | 30.0% | |
| AAAATCAGTTTAGAAACCAG+GGG | - | chr3_2:71049524-71049543 | None:intergenic | 30.0% | |
| TCCTTATTCTTTCGGATAAT+TGG | + | chr3_2:71049787-71049806 | Msa0421990:intron | 30.0% | |
| ACCAATTATCCGAAAGAATA+AGG | - | chr3_2:71049791-71049810 | None:intergenic | 30.0% | |
| AGAGTTAAAAGGGTAATTCA+TGG | - | chr3_2:71049988-71050007 | None:intergenic | 30.0% | |
| GAATTTCATGTGATAGAATG+TGG | + | chr3_2:71050142-71050161 | Msa0421990:intron | 30.0% | |
| ATGTAAATGTGAGATTGTTC+CGG | + | chr3_2:71050171-71050190 | Msa0421990:CDS | 30.0% | |
| GTAGATGATATCCAAAAAAG+CGG | - | chr3_2:71050466-71050485 | None:intergenic | 30.0% | |
| ATGGGATAATAAACATGTCT+AGG | + | chr3_2:71051207-71051226 | Msa0421990:intron | 30.0% | |
| AGGCTAAGATATACTATCAA+AGG | - | chr3_2:71051341-71051360 | None:intergenic | 30.0% | |
| ! | TTAGCCTTTAACATATTGTC+TGG | + | chr3_2:71051354-71051373 | Msa0421990:intron | 30.0% |
| !! | CCGTACAAAATTGATTTGTA+AGG | + | chr3_2:71051384-71051403 | Msa0421990:intron | 30.0% |
| ! | TATTAACCGATCTCTAAAAG+AGG | + | chr3_2:71051702-71051721 | Msa0421990:intron | 30.0% |
| !! | TTAGTTCCTCTTTTAGAGAT+CGG | - | chr3_2:71051711-71051730 | None:intergenic | 30.0% |
| ! | ATTTTCTGATTTCTGCAATC+AGG | + | chr3_2:71051730-71051749 | Msa0421990:intron | 30.0% |
| CTAGATATCAAGGTCAAATT+AGG | + | chr3_2:71051764-71051783 | Msa0421990:CDS | 30.0% | |
| TCTTTCATTGTTACACATGA+TGG | - | chr3_2:71051972-71051991 | None:intergenic | 30.0% | |
| TTTAAGTAATGGTGTGGATA+CGG | + | chr3_2:71052006-71052025 | Msa0421990:CDS | 30.0% | |
| !! | ATTCTTCGGTGTTTGATTAA+TGG | + | chr3_2:71052103-71052122 | Msa0421990:CDS | 30.0% |
| GATTAATGGTAAGTGTAAGT+TGG | + | chr3_2:71052117-71052136 | Msa0421990:CDS | 30.0% | |
| AGTTTATCAGAAAGCAATTC+TGG | + | chr3_2:71052300-71052319 | Msa0421990:CDS | 30.0% | |
| TGAAAAAACTCATCGAATAC+CGG | + | chr3_2:71052416-71052435 | Msa0421990:CDS | 30.0% | |
| GAACCAAAATGGTGAAAATA+AGG | + | chr3_2:71052600-71052619 | Msa0421990:CDS | 30.0% | |
| GTTTGAATATGCCCTTAAAA+AGG | + | chr3_2:71052642-71052661 | Msa0421990:CDS | 30.0% | |
| ! | ATTCAGACATCCCTTTTTAA+GGG | - | chr3_2:71052656-71052675 | None:intergenic | 30.0% |
| ! | TATTCAGACATCCCTTTTTA+AGG | - | chr3_2:71052657-71052676 | None:intergenic | 30.0% |
| GAATATTAGTACTTTAACCG+AGG | + | chr3_2:71052672-71052691 | Msa0421990:CDS | 30.0% | |
| ATATTAGTACTTTAACCGAG+GGG | + | chr3_2:71052674-71052693 | Msa0421990:CDS | 30.0% | |
| !!! | TATGATGTGAATGGTTTTGA+TGG | + | chr3_2:71052766-71052785 | Msa0421990:CDS | 30.0% |
| CTTGCTAGAGAAAATAACAA+AGG | + | chr3_2:71052910-71052929 | Msa0421990:CDS | 30.0% | |
| GTGAAGAAACATACAAAATG+TGG | + | chr3_2:71052997-71053016 | Msa0421990:CDS | 30.0% | |
| ! | AAGTTTGATGTTGATGAGTT+AGG | + | chr3_2:71053162-71053181 | Msa0421990:CDS | 30.0% |
| TGTTACTGCAAAAAATAAGG+AGG | + | chr3_2:71053197-71053216 | Msa0421990:CDS | 30.0% | |
| !! | ATTAGCTCTAGAACCAAAAA+TGG | - | chr3_2:71053298-71053317 | None:intergenic | 30.0% |
| ATCTCTGTTTCGTAGTCAAT+TGG | - | chr3_2:71048844-71048863 | None:intergenic | 35.0% | |
| TGGATTCGCTAAACATTCAA+TGG | - | chr3_2:71048914-71048933 | None:intergenic | 35.0% | |
| TGAATGTTTAGCGAATCCAT+TGG | + | chr3_2:71048915-71048934 | Msa0421990:CDS | 35.0% | |
| ATGAAGTTAACATCCACCAA+TGG | - | chr3_2:71048934-71048953 | None:intergenic | 35.0% | |
| ! | TTGGTGGATGTTAACTTCAT+TGG | + | chr3_2:71048934-71048953 | Msa0421990:CDS | 35.0% |
| GGATGTTAACTTCATTGGAA+CGG | + | chr3_2:71048939-71048958 | Msa0421990:CDS | 35.0% | |
| GATGTTGAAGTCCAAAACAA+TGG | + | chr3_2:71048963-71048982 | Msa0421990:CDS | 35.0% | |
| TACACTGAATTTACTCGATG+AGG | - | chr3_2:71049012-71049031 | None:intergenic | 35.0% | |
| ! | TTCAATTTTGTGATTGCGCT+TGG | + | chr3_2:71049231-71049250 | Msa0421990:intron | 35.0% |
| AGCTGCAGTTTATCTGAAAA+CGG | - | chr3_2:71049297-71049316 | None:intergenic | 35.0% | |
| ! | TCAATTTAGCTCATCGTGAT+CGG | + | chr3_2:71049325-71049344 | Msa0421990:intron | 35.0% |
| ! | TGAATTTTCTTCTTTTCCCC+TGG | + | chr3_2:71049505-71049524 | Msa0421990:intron | 35.0% |
| TTCATGTATGGAACTATGTC+AGG | + | chr3_2:71049752-71049771 | Msa0421990:intron | 35.0% | |
| TCATGTATGGAACTATGTCA+GGG | + | chr3_2:71049753-71049772 | Msa0421990:intron | 35.0% | |
| TGTAAATGTGAGATTGTTCC+GGG | + | chr3_2:71050172-71050191 | Msa0421990:CDS | 35.0% | |
| GGAAGGCCATTTGAAAATAT+TGG | + | chr3_2:71050220-71050239 | Msa0421990:CDS | 35.0% | |
| AGGCCATTTGAAAATATTGG+AGG | + | chr3_2:71050223-71050242 | Msa0421990:CDS | 35.0% | |
| ! | GGACCTCCAATATTTTCAAA+TGG | - | chr3_2:71050229-71050248 | None:intergenic | 35.0% |
| ATATTGGAGGTCCTTATCAA+TGG | + | chr3_2:71050236-71050255 | Msa0421990:CDS | 35.0% | |
| TTTACTTGAAGCAAGCTATG+TGG | + | chr3_2:71050289-71050308 | Msa0421990:CDS | 35.0% | |
| TTACTTGAAGCAAGCTATGT+GGG | + | chr3_2:71050290-71050309 | Msa0421990:CDS | 35.0% | |
| GACATGTCAGACACTAAATA+TGG | + | chr3_2:71050520-71050539 | Msa0421990:intron | 35.0% | |
| TGATAGAACCAATAGGAGTT+GGG | - | chr3_2:71050746-71050765 | None:intergenic | 35.0% | |
| ATGATAGAACCAATAGGAGT+TGG | - | chr3_2:71050747-71050766 | None:intergenic | 35.0% | |
| TGGATGTTAATGCAATGGAT+AGG | + | chr3_2:71051041-71051060 | Msa0421990:CDS | 35.0% | |
| TCAACATTAGCGTGAAGAAA+TGG | - | chr3_2:71051088-71051107 | None:intergenic | 35.0% | |
| GAAACTTGACAGGCTAATAT+TGG | - | chr3_2:71051655-71051674 | None:intergenic | 35.0% | |
| ACACAATGTAGAAACTTGAC+AGG | - | chr3_2:71051665-71051684 | None:intergenic | 35.0% | |
| TGGTGTAAGACTAGATATCA+AGG | + | chr3_2:71051754-71051773 | Msa0421990:CDS | 35.0% | |
| !! | GTAGAGTATTTTGAATCCAC+TGG | + | chr3_2:71051872-71051891 | Msa0421990:CDS | 35.0% |
| TCACCTAATAGTTTCCACAT+TGG | + | chr3_2:71051926-71051945 | Msa0421990:CDS | 35.0% | |
| CTTCCAATGTGGAAACTATT+AGG | - | chr3_2:71051932-71051951 | None:intergenic | 35.0% | |
| TTGGATCATGCAACATTCTT+CGG | + | chr3_2:71052089-71052108 | Msa0421990:CDS | 35.0% | |
| TTGGACTCACAAACAAAGTT+TGG | + | chr3_2:71052136-71052155 | Msa0421990:CDS | 35.0% | |
| ! | ACAAACAAAGTTTGGTGACA+CGG | + | chr3_2:71052144-71052163 | Msa0421990:CDS | 35.0% |
| !! | CTACGAGTTTTAGTATCATC+AGG | + | chr3_2:71052205-71052224 | Msa0421990:CDS | 35.0% |
| !! | CAGTAGCAAGTTTTAATCAG+TGG | + | chr3_2:71052272-71052291 | Msa0421990:CDS | 35.0% |
| AAGATTGATTACATCAGCTC+CGG | - | chr3_2:71052539-71052558 | None:intergenic | 35.0% | |
| CTCATAGACTTGAACCAAAA+TGG | + | chr3_2:71052589-71052608 | Msa0421990:CDS | 35.0% | |
| !! | GAAGGGTATTATGATGTGAA+TGG | + | chr3_2:71052757-71052776 | Msa0421990:CDS | 35.0% |
| !!! | GTGAATGGTTTTGATGGAAA+TGG | + | chr3_2:71052772-71052791 | Msa0421990:CDS | 35.0% |
| TTAGCAGCAAGAGAAAGTAA+TGG | + | chr3_2:71052811-71052830 | Msa0421990:CDS | 35.0% | |
| TTCCATCGAAATCTTTCACT+TGG | - | chr3_2:71053132-71053151 | None:intergenic | 35.0% | |
| CAACATCAAACTTCTTCCTA+CGG | - | chr3_2:71053155-71053174 | None:intergenic | 35.0% | |
| !! | TGCATTTTGTTTGTGAAGGT+GGG | + | chr3_2:71053220-71053239 | Msa0421990:CDS | 35.0% |
| !! | GTAACAAGAGAAGCCATTTT+TGG | + | chr3_2:71053282-71053301 | Msa0421990:CDS | 35.0% |
| !! | TTTGGTTCTAGAGCTAATAC+TGG | + | chr3_2:71053300-71053319 | Msa0421990:CDS | 35.0% |
| ATGTTTAGCGAATCCATTGG+TGG | + | chr3_2:71048918-71048937 | Msa0421990:CDS | 40.0% | |
| ! | AAGCACGATCTCCATTGTTT+TGG | - | chr3_2:71048977-71048996 | None:intergenic | 40.0% |
| ATAAGGCAGAACATTCGGAA+CGG | - | chr3_2:71049122-71049141 | None:intergenic | 40.0% | |
| CAGATAAACTGCAGCTTAGT+AGG | + | chr3_2:71049301-71049320 | Msa0421990:intron | 40.0% | |
| ATGATTGCATTTGTCGTGTC+CGG | + | chr3_2:71049355-71049374 | Msa0421990:intron | 40.0% | |
| ATGAGTTTCATGCACAGAGA+TGG | - | chr3_2:71049410-71049429 | None:intergenic | 40.0% | |
| CATGTATGGAACTATGTCAG+GGG | + | chr3_2:71049754-71049773 | Msa0421990:intron | 40.0% | |
| GTAAATGTGAGATTGTTCCG+GGG | + | chr3_2:71050173-71050192 | Msa0421990:CDS | 40.0% | |
| GATGAGTACATCAACAACCT+CGG | - | chr3_2:71050411-71050430 | None:intergenic | 40.0% | |
| GGTTGTTGATGTACTCATCA+AGG | + | chr3_2:71050412-71050431 | Msa0421990:CDS | 40.0% | |
| !!! | CTAGTGTATGTCCGCTTTTT+TGG | + | chr3_2:71050452-71050471 | Msa0421990:intron | 40.0% |
| GACGTGTCAGACACTAAATA+TGG | + | chr3_2:71050597-71050616 | Msa0421990:intron | 40.0% | |
| CTTTGAACTTTGACTGACAG+AGG | - | chr3_2:71050626-71050645 | None:intergenic | 40.0% | |
| GACGTGTCAGACACTAAATA+TGG | + | chr3_2:71050597-71050616 | Msa0421990:intron | 40.0% | |
| AGAGACTAGACTTTGAACCT+TGG | - | chr3_2:71050714-71050733 | None:intergenic | 40.0% | |
| ! | ACGTAGGGGTTACCAAATTT+TGG | - | chr3_2:71050886-71050905 | None:intergenic | 40.0% |
| TGGAGTGGATGTTAATGCAA+TGG | + | chr3_2:71051036-71051055 | Msa0421990:CDS | 40.0% | |
| ! | CAATGCATTATTTGCTGCTG+TGG | + | chr3_2:71051111-71051130 | Msa0421990:CDS | 40.0% |
| TGTAGTTAGACTACTGTTGC+AGG | + | chr3_2:71051150-71051169 | Msa0421990:CDS | 40.0% | |
| TGGGCATGTCATTATCATCA+TGG | + | chr3_2:71051307-71051326 | Msa0421990:intron | 40.0% | |
| TGGTGTGTGGATAATTTGGT+TGG | + | chr3_2:71051472-71051491 | Msa0421990:intron | 40.0% | |
| TGTGTGGATAATTTGGTTGG+TGG | + | chr3_2:71051475-71051494 | Msa0421990:intron | 40.0% | |
| GTTTCATAGTCTGTCGATCA+GGG | - | chr3_2:71051501-71051520 | None:intergenic | 40.0% | |
| TCTGATTTCTGCAATCAGGT+TGG | + | chr3_2:71051734-71051753 | Msa0421990:intron | 40.0% | |
| TCAAGGTCAAATTAGGAGCT+TGG | + | chr3_2:71051771-71051790 | Msa0421990:CDS | 40.0% | |
| TCAAATTAGGAGCTTGGTCT+TGG | + | chr3_2:71051777-71051796 | Msa0421990:CDS | 40.0% | |
| ! | CAAATTAGGAGCTTGGTCTT+GGG | + | chr3_2:71051778-71051797 | Msa0421990:CDS | 40.0% |
| ACAGGAGAAGAATTTCGTGT+AGG | + | chr3_2:71051809-71051828 | Msa0421990:CDS | 40.0% | |
| GAAGAATTTCGTGTAGGTGT+TGG | + | chr3_2:71051815-71051834 | Msa0421990:CDS | 40.0% | |
| CATGTTGAGTATAGTACCAG+TGG | - | chr3_2:71051891-71051910 | None:intergenic | 40.0% | |
| TGTGGAAACTATTAGGTGAC+AGG | - | chr3_2:71051925-71051944 | None:intergenic | 40.0% | |
| ! | CATTGTTACACATGATGGTG+TGG | - | chr3_2:71051967-71051986 | None:intergenic | 40.0% |
| CATGTGAATAGGGTGTACAT+TGG | - | chr3_2:71052059-71052078 | None:intergenic | 40.0% | |
| CAATGTACACCCTATTCACA+TGG | + | chr3_2:71052057-71052076 | Msa0421990:CDS | 40.0% | |
| !! | CGGCATTGATGATTTGTACA+AGG | + | chr3_2:71052164-71052183 | Msa0421990:CDS | 40.0% |
| TTGGGGATAGTAAATTCGTC+CGG | + | chr3_2:71052235-71052254 | Msa0421990:CDS | 40.0% | |
| CTAGATGAACAAAACGCGAA+TGG | + | chr3_2:71052448-71052467 | Msa0421990:CDS | 40.0% | |
| ! | TTCAAGGTACTTCTTCATGC+CGG | + | chr3_2:71052517-71052536 | Msa0421990:CDS | 40.0% |
| TCTCTTGCTGCTAACATCAA+TGG | - | chr3_2:71052805-71052824 | None:intergenic | 40.0% | |
| ACAAAGGAAATGATGCAGAG+CGG | + | chr3_2:71052926-71052945 | Msa0421990:CDS | 40.0% | |
| GCTAGAATAGTAGTGTTGTG+TGG | + | chr3_2:71052967-71052986 | Msa0421990:CDS | 40.0% | |
| GTCGCCACATAAGAAACAAT+TGG | + | chr3_2:71053026-71053045 | Msa0421990:CDS | 40.0% | |
| ! | TGCTGCTGGAATTTTACGTT+GGG | + | chr3_2:71053059-71053078 | Msa0421990:CDS | 40.0% |
| ! | TGTTGTTTGTAAAGAGGCTG+AGG | + | chr3_2:71053101-71053120 | Msa0421990:CDS | 40.0% |
| GACCAAGTGAAAGATTTCGA+TGG | + | chr3_2:71053127-71053146 | Msa0421990:CDS | 40.0% | |
| AAAGATTTCGATGGAACCGT+AGG | + | chr3_2:71053136-71053155 | Msa0421990:CDS | 40.0% | |
| !! | GAGGTGCATTTTGTTTGTGA+AGG | + | chr3_2:71053216-71053235 | Msa0421990:CDS | 40.0% |
| !! | GTGCATTTTGTTTGTGAAGG+TGG | + | chr3_2:71053219-71053238 | Msa0421990:CDS | 40.0% |
| !! | GCATTTTGTTTGTGAAGGTG+GGG | + | chr3_2:71053221-71053240 | Msa0421990:CDS | 40.0% |
| GGTTGAAATGGCTGAGTTAT+GGG | + | chr3_2:71053242-71053261 | Msa0421990:CDS | 40.0% | |
| TGTTTCCTTAGCCCTGTACT+AGG | - | chr3_2:71048814-71048833 | None:intergenic | 45.0% | |
| ! | TGAGGTCACTGCTCTGTTTT+TGG | + | chr3_2:71049047-71049066 | Msa0421990:CDS | 45.0% |
| !!! | CTGTTTTTGGCTGCACATTC+TGG | + | chr3_2:71049060-71049079 | Msa0421990:CDS | 45.0% |
| GACTCTAATTCGTAAGCTGC+TGG | + | chr3_2:71049089-71049108 | Msa0421990:CDS | 45.0% | |
| TAGCTTAGACGTCCAGATTG+TGG | + | chr3_2:71049712-71049731 | Msa0421990:intron | 45.0% | |
| AGCTTAGACGTCCAGATTGT+GGG | + | chr3_2:71049713-71049732 | Msa0421990:intron | 45.0% | |
| ATCCAACCAAACCCACAATC+TGG | - | chr3_2:71049727-71049746 | None:intergenic | 45.0% | |
| TTGGAGGTCCTTATCAATGG+TGG | + | chr3_2:71050239-71050258 | Msa0421990:CDS | 45.0% | |
| TGGAGGTCCTTATCAATGGT+GGG | + | chr3_2:71050240-71050259 | Msa0421990:CDS | 45.0% | |
| CATGTATTGCAACACGAGGA+CGG | - | chr3_2:71050358-71050377 | None:intergenic | 45.0% | |
| TCTGCAACAAGCAGAGACAA+GGG | - | chr3_2:71050381-71050400 | None:intergenic | 45.0% | |
| ! | ATGGATAGCTCTATCAGCCA+AGG | + | chr3_2:71050694-71050713 | Msa0421990:intron | 45.0% |
| TCACTAGACCCAACTCCTAT+TGG | + | chr3_2:71050735-71050754 | Msa0421990:intron | 45.0% | |
| ! | TCTTGGGTTTGTTTGCAGCA+TGG | + | chr3_2:71051016-71051035 | Msa0421990:intron | 45.0% |
| AGTTAGACTACTGTTGCAGG+TGG | + | chr3_2:71051153-71051172 | Msa0421990:intron | 45.0% | |
| GTTAGACTACTGTTGCAGGT+GGG | + | chr3_2:71051154-71051173 | Msa0421990:intron | 45.0% | |
| TTAGACTACTGTTGCAGGTG+GGG | + | chr3_2:71051155-71051174 | Msa0421990:intron | 45.0% | |
| CTCTTAGACCCAACACTGTT+CGG | + | chr3_2:71051447-71051466 | Msa0421990:intron | 45.0% | |
| !! | GGCTTGGTGTGTGGATAATT+TGG | + | chr3_2:71051468-71051487 | Msa0421990:intron | 45.0% |
| GGTTTCATAGTCTGTCGATC+AGG | - | chr3_2:71051502-71051521 | None:intergenic | 45.0% | |
| ! | TGGTCTTGGGAAACAGATAC+AGG | + | chr3_2:71051791-71051810 | Msa0421990:CDS | 45.0% |
| ! | CTGAGCCTTATCCAATCACA+TGG | + | chr3_2:71051843-71051862 | Msa0421990:CDS | 45.0% |
| GCACACCATGTGATTGGATA+AGG | - | chr3_2:71051851-71051870 | None:intergenic | 45.0% | |
| TCTACAGCACACCATGTGAT+TGG | - | chr3_2:71051857-71051876 | None:intergenic | 45.0% | |
| GCAAGAGAGTTCTTCCAATG+TGG | - | chr3_2:71051943-71051962 | None:intergenic | 45.0% | |
| AGTATCATCAGGAGCTGACT+TGG | + | chr3_2:71052216-71052235 | Msa0421990:CDS | 45.0% | |
| ! | GTATCATCAGGAGCTGACTT+GGG | + | chr3_2:71052217-71052236 | Msa0421990:CDS | 45.0% |
| !! | TATCATCAGGAGCTGACTTG+GGG | + | chr3_2:71052218-71052237 | Msa0421990:CDS | 45.0% |
| TACTGAAGTTGCGCAATGAC+CGG | - | chr3_2:71052257-71052276 | None:intergenic | 45.0% | |
| TGTCTCCATAACAAGCTGCT+CGG | - | chr3_2:71052711-71052730 | None:intergenic | 45.0% | |
| CAAAGGAAATGATGCAGAGC+GGG | + | chr3_2:71052927-71052946 | Msa0421990:CDS | 45.0% | |
| !! | TTGGTAATGATTGGTGCTGC+TGG | + | chr3_2:71053045-71053064 | Msa0421990:CDS | 45.0% |
| !! | GTGCTGCTGGAATTTTACGT+TGG | + | chr3_2:71053058-71053077 | Msa0421990:CDS | 45.0% |
| ! | GCTGCTGGAATTTTACGTTG+GGG | + | chr3_2:71053060-71053079 | Msa0421990:CDS | 45.0% |
| ! | CTGCTGGAATTTTACGTTGG+GGG | + | chr3_2:71053061-71053080 | Msa0421990:CDS | 45.0% |
| GTTTGTAAAGAGGCTGAGGT+AGG | + | chr3_2:71053105-71053124 | Msa0421990:CDS | 45.0% | |
| TTGTGAAGGTGGGGTTGAAA+TGG | + | chr3_2:71053230-71053249 | Msa0421990:CDS | 45.0% | |
| GGGTTGAAATGGCTGAGTTA+TGG | + | chr3_2:71053241-71053260 | Msa0421990:CDS | 45.0% | |
| ATGGCTGAGTTATGGGTAAG+AGG | + | chr3_2:71053249-71053268 | Msa0421990:CDS | 45.0% | |
| TGGCTGAGTTATGGGTAAGA+GGG | + | chr3_2:71053250-71053269 | Msa0421990:CDS | 45.0% | |
| ! | CGTTGGTGAGTCCTAGTACA+GGG | + | chr3_2:71048800-71048819 | Msa0421990:CDS | 50.0% |
| TGAGTCCTAGTACAGGGCTA+AGG | + | chr3_2:71048806-71048825 | Msa0421990:CDS | 50.0% | |
| CTTGTTGATGCAGCTCATCG+CGG | + | chr3_2:71048874-71048893 | Msa0421990:CDS | 50.0% | |
| ATGCACACTCAGACACACAC+CGG | - | chr3_2:71049377-71049396 | None:intergenic | 50.0% | |
| AGACGTCCAGATTGTGGGTT+TGG | + | chr3_2:71049718-71049737 | Msa0421990:intron | 50.0% | |
| ! | GTCCAGATTGTGGGTTTGGT+TGG | + | chr3_2:71049722-71049741 | Msa0421990:intron | 50.0% |
| ATGCTACAACAGCAGCAGTG+AGG | + | chr3_2:71050198-71050217 | Msa0421990:CDS | 50.0% | |
| TGCTACAACAGCAGCAGTGA+GGG | + | chr3_2:71050199-71050218 | Msa0421990:CDS | 50.0% | |
| GGAGGTCCTTATCAATGGTG+GGG | + | chr3_2:71050241-71050260 | Msa0421990:CDS | 50.0% | |
| AACACGAGGACGGATCATGT+TGG | - | chr3_2:71050348-71050367 | None:intergenic | 50.0% | |
| AGGGCATGTATTGCAACACG+AGG | - | chr3_2:71050362-71050381 | None:intergenic | 50.0% | |
| CTCTGCAACAAGCAGAGACA+AGG | - | chr3_2:71050382-71050401 | None:intergenic | 50.0% | |
| ! | CTTGTCTCTGCTTGTTGCAG+AGG | + | chr3_2:71050380-71050399 | Msa0421990:CDS | 50.0% |
| TTGTTGCAGAGGATTCACCG+AGG | + | chr3_2:71050391-71050410 | Msa0421990:CDS | 50.0% | |
| ! | GGTTTGTTTGCAGCATGGAG+TGG | + | chr3_2:71051021-71051040 | Msa0421990:intron | 50.0% |
| ! | TATTTGCTGCTGTGGTCAGC+AGG | + | chr3_2:71051119-71051138 | Msa0421990:CDS | 50.0% |
| ! | CGAACAGTGTTGGGTCTAAG+AGG | - | chr3_2:71051449-71051468 | None:intergenic | 50.0% |
| ACACCAAGCCGAACAGTGTT+GGG | - | chr3_2:71051458-71051477 | None:intergenic | 50.0% | |
| CACTCGAGCGAATGACATAG+AGG | + | chr3_2:71052390-71052409 | Msa0421990:CDS | 50.0% | |
| GGGTAACGTGGAAGCTTTCA+AGG | + | chr3_2:71052501-71052520 | Msa0421990:CDS | 50.0% | |
| ! | TAACAAGCTGCTCGGTGAAG+AGG | - | chr3_2:71052703-71052722 | None:intergenic | 50.0% |
| !! | CTTCACCGAGCAGCTTGTTA+TGG | + | chr3_2:71052703-71052722 | Msa0421990:CDS | 50.0% |
| ! | GCGTTGGTGAGTCCTAGTAC+AGG | + | chr3_2:71048799-71048818 | Msa0421990:CDS | 55.0% |
| CTGCTGTTGTAGCATAGCCC+CGG | - | chr3_2:71050193-71050212 | None:intergenic | 55.0% | |
| ACAACAGCAGCAGTGAGGGA+AGG | + | chr3_2:71050203-71050222 | Msa0421990:CDS | 55.0% | |
| GTCGCAACTTGCATGCGAAG+AGG | + | chr3_2:71050265-71050284 | Msa0421990:CDS | 55.0% | |
| AGACCCAACACTGTTCGGCT+TGG | + | chr3_2:71051452-71051471 | Msa0421990:intron | 55.0% | |
| CACACCAAGCCGAACAGTGT+TGG | - | chr3_2:71051459-71051478 | None:intergenic | 55.0% | |
| !! | ACACTGTTCGGCTTGGTGTG+TGG | + | chr3_2:71051459-71051478 | Msa0421990:intron | 55.0% |
| GTCGCGCAGCCATGTGAATA+GGG | - | chr3_2:71052069-71052088 | None:intergenic | 55.0% | |
| AGTCGCGCAGCCATGTGAAT+AGG | - | chr3_2:71052070-71052089 | None:intergenic | 55.0% | |
| ATTCACATGGCTGCGCGACT+TGG | + | chr3_2:71052070-71052089 | Msa0421990:CDS | 55.0% | |
| TGTCATGATAGCTGCCGCAG+AGG | + | chr3_2:71052480-71052499 | Msa0421990:CDS | 55.0% | |
| GTCATGATAGCTGCCGCAGA+GGG | + | chr3_2:71052481-71052500 | Msa0421990:CDS | 55.0% | |
| AGCTTCCACGTTACCCTCTG+CGG | - | chr3_2:71052497-71052516 | None:intergenic | 55.0% | |
| TCGGTGAAGAGGATTCCCCT+CGG | - | chr3_2:71052692-71052711 | None:intergenic | 55.0% | |
| GCGACGCCCCACCATTGATA+AGG | - | chr3_2:71050250-71050269 | None:intergenic | 60.0% | |
| AGCTGCCGCAGAGGGTAACG+TGG | + | chr3_2:71052489-71052508 | Msa0421990:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 71048796 | 71053326 | 71048796 | ID=Msa0421990;Name=Msa0421990 |
| chr3_2 | mRNA | 71048796 | 71053326 | 71048796 | ID=Msa0421990-mRNA-1;Parent=Msa0421990;Name=Msa0421990-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|4|0|767 |
| chr3_2 | exon | 71048796 | 71049110 | 71048796 | ID=Msa0421990-mRNA-1:exon:17232;Parent=Msa0421990-mRNA-1 |
| chr3_2 | exon | 71050158 | 71050433 | 71050158 | ID=Msa0421990-mRNA-1:exon:17233;Parent=Msa0421990-mRNA-1 |
| chr3_2 | exon | 71051034 | 71051171 | 71051034 | ID=Msa0421990-mRNA-1:exon:17234;Parent=Msa0421990-mRNA-1 |
| chr3_2 | exon | 71051752 | 71053326 | 71051752 | ID=Msa0421990-mRNA-1:exon:17235;Parent=Msa0421990-mRNA-1 |
| chr3_2 | CDS | 71048796 | 71049110 | 71048796 | ID=Msa0421990-mRNA-1:cds;Parent=Msa0421990-mRNA-1 |
| chr3_2 | CDS | 71050158 | 71050433 | 71050158 | ID=Msa0421990-mRNA-1:cds;Parent=Msa0421990-mRNA-1 |
| chr3_2 | CDS | 71051034 | 71051171 | 71051034 | ID=Msa0421990-mRNA-1:cds;Parent=Msa0421990-mRNA-1 |
| chr3_2 | CDS | 71051752 | 71053326 | 71051752 | ID=Msa0421990-mRNA-1:cds;Parent=Msa0421990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
