AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0431300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0431300 MtrunA17_Chr3g0136211 94.094 762 11 2 470 1197 10 771 0.0 1454
Msa0431300 MtrunA17_Chr3g0136211 97.028 471 12 2 1 469 1 471 0.0 941
Msa0431300 MtrunA17_Chr3g0136161 82.445 769 95 4 468 1197 5 772 0.0 1217
Msa0431300 MtrunA17_Chr3g0136161 83.263 472 72 3 4 469 2 472 0.0 756
Msa0431300 MtrunA17_Chr3g0136141 76.750 757 120 6 477 1197 1 737 0.0 1126
Msa0431300 MtrunA17_Chr3g0136141 75.274 457 90 5 16 469 1 437 0.0 682
Msa0431300 MtrunA17_Chr2g0300341 48.280 756 296 14 481 1186 15 725 0.0 656
Msa0431300 MtrunA17_Chr2g0300341 42.827 467 205 13 20 469 15 436 2.78e-92 313
Msa0431300 MtrunA17_Chr8g0369461 43.937 569 277 9 657 1189 129 691 6.97e-148 461
Msa0431300 MtrunA17_Chr8g0369461 40.316 253 136 6 196 439 129 375 9.45e-47 179
Msa0431300 MtrunA17_Chr1g0211561 38.710 682 319 10 599 1196 251 917 1.93e-145 462
Msa0431300 MtrunA17_Chr1g0211561 33.420 383 189 9 138 469 251 618 1.95e-54 206
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0431300 AT5G12080.1 55.899 712 264 8 511 1186 33 730 0.0 784
Msa0431300 AT5G12080.1 53.664 423 179 7 50 469 33 441 1.28e-136 433
Msa0431300 AT5G12080.2 55.899 712 264 8 511 1186 33 730 0.0 784
Msa0431300 AT5G12080.2 53.664 423 179 7 50 469 33 441 1.28e-136 433
Msa0431300 AT5G12080.3 55.899 712 264 8 511 1186 33 730 0.0 784
Msa0431300 AT5G12080.3 53.664 423 179 7 50 469 33 441 1.28e-136 433
Msa0431300 AT5G19520.1 50.498 703 298 6 520 1186 50 738 0.0 699
Msa0431300 AT5G19520.1 49.639 415 191 5 59 469 50 450 2.35e-121 393
Msa0431300 AT5G19520.2 50.498 703 298 6 520 1186 50 738 0.0 699
Msa0431300 AT5G19520.2 49.639 415 191 5 59 469 50 450 2.35e-121 393
Msa0431300 AT2G17010.1 37.967 669 338 6 584 1189 236 890 3.87e-147 466
Msa0431300 AT2G17010.1 33.422 377 207 4 123 469 236 598 4.49e-58 218
Msa0431300 AT1G53470.1 38.528 693 333 12 577 1189 181 860 5.08e-143 455
Msa0431300 AT1G53470.1 34.663 401 202 10 116 469 181 568 4.23e-56 211
Msa0431300 AT3G14810.1 40.810 691 322 14 577 1194 188 864 5.43e-142 452
Msa0431300 AT3G14810.1 37.310 394 193 13 116 469 188 567 3.48e-57 214
Msa0431300 AT1G78610.1 40.630 635 304 7 628 1196 211 838 2.78e-140 447
Msa0431300 AT1G78610.1 36.310 336 175 5 167 469 211 540 1.68e-55 209
Msa0431300 AT2G17000.2 39.672 610 296 9 644 1189 222 823 1.85e-131 423
Msa0431300 AT2G17000.2 36.792 318 162 7 183 469 222 531 5.79e-52 198
Msa0431300 AT2G17000.1 39.672 610 296 9 644 1189 222 823 2.38e-131 423
Msa0431300 AT2G17000.1 36.792 318 162 7 183 469 222 531 6.44e-52 198
Msa0431300 AT3G14810.2 38.227 688 303 15 577 1191 188 826 3.03e-122 398
Msa0431300 AT3G14810.2 32.741 394 178 13 116 469 188 534 2.79e-42 168
Msa0431300 AT2G17010.2 37.061 313 163 3 650 932 292 600 2.96e-60 220
Msa0431300 AT2G17010.2 36.977 311 162 3 189 469 292 598 1.29e-59 218

Find 256 sgRNAs with CRISPR-Local

Find 392 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAATGAACTTTCAAGAATT+TGG 0.059991 3_2:+83386078 Msa0431300:CDS
GACATTGTTGCTAAAGATTT+TGG 0.123829 3_2:+83382313 Msa0431300:CDS
GACATTGTTGCTAAAGATTT+TGG 0.123829 3_2:+83384277 Msa0431300:CDS
TTTCTTTGTGCTACCTTTAC+TGG 0.130051 3_2:-83382492 None:intergenic
TTTCTTTGTGCTACCTTTAC+TGG 0.130051 3_2:-83384456 None:intergenic
TAAATTGGCCACGAAGATTT+TGG 0.178672 3_2:+83382232 Msa0431300:CDS
TAAATTGGCCACGAAGATTT+TGG 0.178672 3_2:+83384196 Msa0431300:CDS
TCTACACTGTCACCCATATT+AGG 0.187404 3_2:-83385749 None:intergenic
TCATTTGTAGCAGGAGCTTT+TGG 0.190150 3_2:-83381555 None:intergenic
TCATTTGTAGCAGGAGCTTT+TGG 0.190150 3_2:-83383519 None:intergenic
TTGTACTCCTGAAACTAAAA+TGG 0.194746 3_2:-83382469 None:intergenic
TTGTACTCCTGAAACTAAAA+TGG 0.194746 3_2:-83384433 None:intergenic
CAATGAACTTTCAAGAATTT+GGG 0.230393 3_2:+83386079 Msa0431300:CDS
AGATTTGGAGTTTGGGGCTT+TGG 0.250678 3_2:+83381994 Msa0431300:CDS
AGATTTGGAGTTTGGGGCTT+TGG 0.250678 3_2:+83383958 Msa0431300:CDS
AAGTAACATTCTCTTCTAAA+AGG 0.256225 3_2:-83381668 None:intergenic
AAGTAACATTCTCTTCTAAA+AGG 0.256225 3_2:-83383632 None:intergenic
TTCATGGACTATGAAGATTT+TGG 0.258155 3_2:+83382565 Msa0431300:CDS
TTCATGGACTATGAAGATTT+TGG 0.258155 3_2:+83384529 Msa0431300:CDS
CTAGGGATGAACCTTATTTC+AGG 0.265146 3_2:-83381519 None:intergenic
CTAGGGATGAACCTTATTTC+AGG 0.265146 3_2:-83383483 None:intergenic
TCAGGGGAAGCACAGTTTAA+AGG 0.276027 3_2:-83381501 None:intergenic
TCAGGGGAAGCACAGTTTAA+AGG 0.276027 3_2:-83383465 None:intergenic
AAGGACGGAGATTTGGAGTT+TGG 0.278610 3_2:+83381986 Msa0431300:CDS
AAGGACGGAGATTTGGAGTT+TGG 0.278610 3_2:+83383950 Msa0431300:CDS
TTATTACAGAAGCCCTAATA+TGG 0.287671 3_2:+83385736 Msa0431300:CDS
TTGTTCACCAAATCTTGATT+TGG 0.289978 3_2:-83381625 None:intergenic
TTGTTCACCAAATCTTGATT+TGG 0.289978 3_2:-83383589 None:intergenic
ACTGTTCCGGGTTTATTATT+CGG 0.295778 3_2:-83381744 None:intergenic
ACTGTTCCGGGTTTATTATT+CGG 0.295778 3_2:-83383708 None:intergenic
TATGTTCTGCAGACTCTCTC+TGG 0.301029 3_2:+83382395 Msa0431300:CDS
TATGTTCTGCAGACTCTCTC+TGG 0.301029 3_2:+83384359 Msa0431300:CDS
GTACTTGCGGCTTTCATGTT+TGG 0.306392 3_2:+83385442 Msa0431300:CDS
AACAGTTCTATAAACTGTTC+CGG 0.312967 3_2:-83381757 None:intergenic
AACAGTTCTATAAACTGTTC+CGG 0.312967 3_2:-83383721 None:intergenic
TTCTCAGCCTCTTCCATTAG+TGG 0.319988 3_2:-83382422 None:intergenic
TTCTCAGCCTCTTCCATTAG+TGG 0.319988 3_2:-83384386 None:intergenic
TGGAGTCGAACGATCTAAAT+TGG 0.321444 3_2:+83382217 Msa0431300:CDS
TGGAGTCGAACGATCTAAAT+TGG 0.321444 3_2:+83384181 Msa0431300:CDS
TAACAGTTGAGGAACTAAAA+AGG 0.321821 3_2:+83381967 Msa0431300:CDS
TAACAGTTGAGGAACTAAAA+AGG 0.321821 3_2:+83383931 Msa0431300:CDS
GATGAACACCTTGCGGAATA+AGG 0.326639 3_2:-83386176 None:intergenic
AAAGAAAGAGATTATTGATA+TGG 0.335143 3_2:+83382508 Msa0431300:CDS
TCTAAAAGGATTCCATCAAT+AGG 0.336245 3_2:-83381654 None:intergenic
TCTAAAAGGATTCCATCAAT+AGG 0.336245 3_2:-83383618 None:intergenic
GGTGAACGTGGTGCTTTATA+TGG 0.336535 3_2:-83381723 None:intergenic
GGTGAACGTGGTGCTTTATA+TGG 0.336535 3_2:-83383687 None:intergenic
ACTGTGCTTCCCCTGAAATA+AGG 0.336839 3_2:+83381508 Msa0431300:CDS
ACTGTGCTTCCCCTGAAATA+AGG 0.336839 3_2:+83383472 Msa0431300:CDS
CTACTGGCACAGGCAGAAAC+AGG 0.337087 3_2:+83385111 Msa0431300:intron
TCTCTCTGGGCCTCCACTAA+TGG 0.337430 3_2:+83382409 Msa0431300:CDS
TCTCTCTGGGCCTCCACTAA+TGG 0.337430 3_2:+83384373 Msa0431300:CDS
CACTCCTAGAACACCTTTGA+TGG 0.340051 3_2:+83381797 Msa0431300:CDS
CACTCCTAGAACACCTTTGA+TGG 0.340051 3_2:+83383761 Msa0431300:CDS
TTTATGGCTAGGACAGAGTT+TGG 0.349369 3_2:-83385701 None:intergenic
CAGAAAATCTTTAGCAGCTT+GGG 0.350080 3_2:+83385143 Msa0431300:CDS
AGGACGGAGATTTGGAGTTT+GGG 0.350085 3_2:+83381987 Msa0431300:CDS
AGGACGGAGATTTGGAGTTT+GGG 0.350085 3_2:+83383951 Msa0431300:CDS
TGTTCACCAAATCTTGATTT+GGG 0.359204 3_2:-83381624 None:intergenic
TGTTCACCAAATCTTGATTT+GGG 0.359204 3_2:-83383588 None:intergenic
TTTGGAGTTTGGGGCTTTGG+AGG 0.367529 3_2:+83381997 Msa0431300:CDS
TTTGGAGTTTGGGGCTTTGG+AGG 0.367529 3_2:+83383961 Msa0431300:CDS
TCTAAGCCCAAATCAAGATT+TGG 0.368072 3_2:+83381618 Msa0431300:CDS
TCTAAGCCCAAATCAAGATT+TGG 0.368072 3_2:+83383582 Msa0431300:CDS
AGCAAGAGAAAGTTTCTTCA+TGG 0.373517 3_2:+83382549 Msa0431300:CDS
AGCAAGAGAAAGTTTCTTCA+TGG 0.373517 3_2:+83384513 Msa0431300:CDS
GTGAAAGTAAAGGCCTTAAC+AGG 0.375879 3_2:+83386368 Msa0431300:three_prime_UTR
AAAGAAAGAGGTTATTGATA+TGG 0.383412 3_2:+83384472 Msa0431300:CDS
AACATTCCTGAAAACGTAAT+AGG 0.384096 3_2:-83382711 None:intergenic
AACATTCCTGAAAACGTAAT+AGG 0.384096 3_2:-83384675 None:intergenic
AGTAGTGTGGCTTCTTCTAA+TGG 0.385108 3_2:+83385375 Msa0431300:CDS
GATGCCATCAAAGGTGTTCT+AGG 0.387245 3_2:-83381801 None:intergenic
GATGCCATCAAAGGTGTTCT+AGG 0.387245 3_2:-83383765 None:intergenic
TCAACTCATGATCATGATCT+TGG 0.387525 3_2:-83381437 None:intergenic
TCAACTCATGATCATGATCT+TGG 0.387525 3_2:-83383401 None:intergenic
GGAGTTTGGGGCTTTGGAGG+TGG 0.388035 3_2:+83382000 Msa0431300:CDS
GGAGTTTGGGGCTTTGGAGG+TGG 0.388035 3_2:+83383964 Msa0431300:CDS
CTACACTGTCACCCATATTA+GGG 0.388576 3_2:-83385748 None:intergenic
ACAGTTCTATAAACTGTTCC+GGG 0.389897 3_2:-83381756 None:intergenic
ACAGTTCTATAAACTGTTCC+GGG 0.389897 3_2:-83383720 None:intergenic
CACTTAAGATAACTTGAATC+AGG 0.390741 3_2:-83386213 None:intergenic
TTCTTGTATATGATTTCATC+AGG 0.393170 3_2:-83381846 None:intergenic
TTCTTGTATATGATTTCATC+AGG 0.393170 3_2:-83383810 None:intergenic
ACTCTTGTTTCCCTTCTCAT+TGG 0.393699 3_2:+83382269 Msa0431300:CDS
ACTCTTGTTTCCCTTCTCAT+TGG 0.393699 3_2:+83384233 Msa0431300:CDS
CAATTAAACAAGCTAGTTAC+AGG 0.398707 3_2:+83385331 Msa0431300:CDS
CCAGAAAATCTTTAGCAGCT+TGG 0.399961 3_2:+83385142 Msa0431300:CDS
ATTCATGAATCATGATTGTT+GGG 0.401352 3_2:+83386331 Msa0431300:three_prime_UTR
CACTAATTCACTTCTCCGCT+TGG 0.404975 3_2:-83386109 None:intergenic
GTTGCTAACATTGCCTGTTA+AGG 0.406838 3_2:-83386381 None:intergenic
AATTCATGAATCATGATTGT+TGG 0.409830 3_2:+83386330 Msa0431300:three_prime_UTR
CTGGCATCCTAGTTTCAGTT+TGG 0.410393 3_2:+83385999 Msa0431300:CDS
CTACTATGGTCACCACTACT+AGG 0.415578 3_2:-83385357 None:intergenic
TCCGGCATAGATATAATAAC+TGG 0.425119 3_2:+83386529 Msa0431300:three_prime_UTR
CATCGATCGCCAACATCAAA+TGG 0.429406 3_2:-83385517 None:intergenic
GACAATGTGCGTGAACCATT+TGG 0.437003 3_2:-83382063 None:intergenic
GACAATGTGCGTGAACCATT+TGG 0.437003 3_2:-83384027 None:intergenic
TGGAGAGGAATCCACAATAC+TGG 0.438670 3_2:+83385980 Msa0431300:CDS
AGCAGTTGCTTCCATCTCAT+TGG 0.438791 3_2:-83382684 None:intergenic
AGCAGTTGCTTCCATCTCAT+TGG 0.438791 3_2:-83384648 None:intergenic
GAGTCTGCAGAACATATTGA+TGG 0.441671 3_2:-83382388 None:intergenic
GAGTCTGCAGAACATATTGA+TGG 0.441671 3_2:-83384352 None:intergenic
GAACAACCTTACCCTATTGA+TGG 0.443872 3_2:+83381642 Msa0431300:CDS
GAACAACCTTACCCTATTGA+TGG 0.443872 3_2:+83383606 Msa0431300:CDS
CTTGAAACTTAATAATGAAA+AGG 0.452787 3_2:+83385670 Msa0431300:CDS
CTAAAAGGATTCCATCAATA+GGG 0.453814 3_2:-83381653 None:intergenic
CTAAAAGGATTCCATCAATA+GGG 0.453814 3_2:-83383617 None:intergenic
ACGACGTCAGCAGAGAAAAT+CGG 0.461578 3_2:+83385788 Msa0431300:CDS
TAGAAGAAGCCACACTACTA+TGG 0.462238 3_2:-83385371 None:intergenic
GTGCATCACGGGTAGCTTGT+TGG 0.471724 3_2:+83381938 Msa0431300:CDS
GTGCATCACGGGTAGCTTGT+TGG 0.471724 3_2:+83383902 Msa0431300:CDS
ATCTAGAGAATTAGAGATTG+TGG 0.475217 3_2:-83382615 None:intergenic
ATCTAGAGAATTAGAGATTG+TGG 0.475217 3_2:-83384579 None:intergenic
TCGCTTTGGTTCTACTCACA+TGG 0.480459 3_2:+83382177 Msa0431300:CDS
TCGCTTTGGTTCTACTCACA+TGG 0.480459 3_2:+83384141 Msa0431300:CDS
TGTACTCCTGAAACTAAAAT+GGG 0.489996 3_2:-83382468 None:intergenic
TGTACTCCTGAAACTAAAAT+GGG 0.489996 3_2:-83384432 None:intergenic
GGATCCTCACCAGCTGGACC+TGG 0.490344 3_2:-83381825 None:intergenic
GGATCCTCACCAGCTGGACC+TGG 0.490344 3_2:-83383789 None:intergenic
GATTATTAAATTATGTATCC+AGG 0.492367 3_2:+83386416 Msa0431300:three_prime_UTR
GTGGCATGTTAGTTACCAAA+TGG 0.493145 3_2:+83382048 Msa0431300:CDS
GTGGCATGTTAGTTACCAAA+TGG 0.493145 3_2:+83384012 Msa0431300:CDS
AAGAAAGTTGAATTTAGTAA+AGG 0.494912 3_2:+83381864 Msa0431300:CDS
AAGAAAGTTGAATTTAGTAA+AGG 0.494912 3_2:+83383828 Msa0431300:CDS
AAATGTAAATAAGATTAAGA+TGG 0.497083 3_2:+83386038 Msa0431300:CDS
ATCTCCAGGTCCAGCTGGTG+AGG 0.497675 3_2:+83381821 Msa0431300:CDS
ATCTCCAGGTCCAGCTGGTG+AGG 0.497675 3_2:+83383785 Msa0431300:CDS
CGGAGACAATGGAAGACTCC+AGG 0.502739 3_2:-83386510 None:intergenic
AATGTAAATAAGATTAAGAT+GGG 0.505449 3_2:+83386039 Msa0431300:CDS
TATATCTATGCCGGAGACAA+TGG 0.510742 3_2:-83386521 None:intergenic
TAGTTTCAGTTTGGCAGTGA+AGG 0.512844 3_2:+83386008 Msa0431300:CDS
TTTGTGTTTGTGTGCATCAC+GGG 0.513377 3_2:+83381927 Msa0431300:CDS
TTTGTGTTTGTGTGCATCAC+GGG 0.513377 3_2:+83383891 Msa0431300:CDS
CGCTTTGGTTCTACTCACAT+GGG 0.514104 3_2:+83382178 Msa0431300:CDS
CGCTTTGGTTCTACTCACAT+GGG 0.514104 3_2:+83384142 Msa0431300:CDS
TGGACTGAAGAAATGTATCC+AGG 0.514151 3_2:+83382142 Msa0431300:CDS
TGGACTGAAGAAATGTATCC+AGG 0.514151 3_2:+83384106 Msa0431300:CDS
ATGGCATCTCCAGGTCCAGC+TGG 0.514371 3_2:+83381816 Msa0431300:CDS
ATGGCATCTCCAGGTCCAGC+TGG 0.514371 3_2:+83383780 Msa0431300:CDS
GCCGAAAATAAAAGATCGTA+AGG 0.515257 3_2:+83386597 Msa0431300:three_prime_UTR
TTCAGGAGTACAACCAGTAA+AGG 0.520751 3_2:+83382479 Msa0431300:CDS
TTCAGGAGTACAACCAGTAA+AGG 0.520751 3_2:+83384443 Msa0431300:CDS
AATAATAATAATAAGCATCA+AGG 0.524472 3_2:+83381333 Msa0431300:CDS
ATGTTCTGCAGACTCTCTCT+GGG 0.525655 3_2:+83382396 Msa0431300:CDS
ATGTTCTGCAGACTCTCTCT+GGG 0.525655 3_2:+83384360 Msa0431300:CDS
TAGGGATGAACCTTATTTCA+GGG 0.528282 3_2:-83381518 None:intergenic
TAGGGATGAACCTTATTTCA+GGG 0.528282 3_2:-83383482 None:intergenic
TGACAGACCAAAGAAACAAA+AGG 0.529896 3_2:-83386275 None:intergenic
CATCGGATCCACTTCAACGT+TGG 0.530585 3_2:-83386457 None:intergenic
TACGAAAGACTTGAGAGTCC+TGG 0.532115 3_2:-83386434 None:intergenic
CTTTCGTACCAACGTTGAAG+TGG 0.532133 3_2:+83386449 Msa0431300:three_prime_UTR
TCATCAGGATCCTCACCAGC+TGG 0.532211 3_2:-83381831 None:intergenic
TCATCAGGATCCTCACCAGC+TGG 0.532211 3_2:-83383795 None:intergenic
GTTGGCTAGTTTAACAGTTG+AGG 0.533975 3_2:+83381956 Msa0431300:CDS
GTTGGCTAGTTTAACAGTTG+AGG 0.533975 3_2:+83383920 Msa0431300:CDS
ACCAGTTATTATATCTATGC+CGG 0.534817 3_2:-83386530 None:intergenic
CATTACAAACACGAAGATGA+TGG 0.535612 3_2:-83385491 None:intergenic
GAAGTTTCATCTTAATGAGA+AGG 0.536053 3_2:-83386241 None:intergenic
ACACCTTTGATGGCATCTCC+AGG 0.537728 3_2:+83381807 Msa0431300:CDS
ACACCTTTGATGGCATCTCC+AGG 0.537728 3_2:+83383771 Msa0431300:CDS
GGATACATTTCTTCAGTCCA+TGG 0.539549 3_2:-83382139 None:intergenic
GGATACATTTCTTCAGTCCA+TGG 0.539549 3_2:-83384103 None:intergenic
GGACGGAGATTTGGAGTTTG+GGG 0.539859 3_2:+83381988 Msa0431300:CDS
GGACGGAGATTTGGAGTTTG+GGG 0.539859 3_2:+83383952 Msa0431300:CDS
TACACCATCCAAAATCTTCG+TGG 0.540293 3_2:-83382240 None:intergenic
TACACCATCCAAAATCTTCG+TGG 0.540293 3_2:-83384204 None:intergenic
TATTACAGAAGCCCTAATAT+GGG 0.542039 3_2:+83385737 Msa0431300:CDS
AGGATTCCATCAATAGGGTA+AGG 0.542280 3_2:-83381648 None:intergenic
AGGATTCCATCAATAGGGTA+AGG 0.542280 3_2:-83383612 None:intergenic
TTTGGTCTGTCAAATACCAT+CGG 0.542714 3_2:+83386286 Msa0431300:three_prime_UTR
TAAAGGTAGCACAAAGAAAG+AGG 0.543539 3_2:+83384460 Msa0431300:CDS
TGAATCATGATTGTTGGGAG+TGG 0.544237 3_2:+83386336 Msa0431300:three_prime_UTR
GAGGTGGTGTATGCTTGTGA+TGG 0.544535 3_2:+83382016 Msa0431300:CDS
GAGGTGGTGTATGCTTGTGA+TGG 0.544535 3_2:+83383980 Msa0431300:CDS
GGTAATAATAATAAGCATCA+AGG 0.546427 3_2:+83383297 Msa0431300:intron
AAGCGATCCAAGTGAAAACC+TGG 0.546867 3_2:-83382160 None:intergenic
AAGCGATCCAAGTGAAAACC+TGG 0.546867 3_2:-83384124 None:intergenic
CATGATCTTGGCCATGGTGA+TGG 0.547727 3_2:-83381425 None:intergenic
CATGATCTTGGCCATGGTGA+TGG 0.547727 3_2:-83383389 None:intergenic
ACTCGGTTGAACTTCACCCC+TGG 0.550304 3_2:+83386492 Msa0431300:three_prime_UTR
TAAAGAAATTACCAATGAGA+TGG 0.550653 3_2:+83382673 Msa0431300:CDS
TAAAGAAATTACCAATGAGA+TGG 0.550653 3_2:+83384637 Msa0431300:CDS
CTTCTGTAATAATTGCTGAT+CGG 0.555225 3_2:-83385725 None:intergenic
TCAGCCTCTTCCATTAGTGG+AGG 0.556564 3_2:-83382419 None:intergenic
TCAGCCTCTTCCATTAGTGG+AGG 0.556564 3_2:-83384383 None:intergenic
GTAATGCATCCATTTGATGT+TGG 0.558028 3_2:+83385508 Msa0431300:CDS
AAACTAGGATGCCAGTATTG+TGG 0.562729 3_2:-83385991 None:intergenic
CTGGAGTCTTCCATTGTCTC+CGG 0.563338 3_2:+83386511 Msa0431300:three_prime_UTR
TGGGCCTCCACTAATGGAAG+AGG 0.563345 3_2:+83382415 Msa0431300:CDS
TGGGCCTCCACTAATGGAAG+AGG 0.563345 3_2:+83384379 Msa0431300:CDS
GGTTTATTATTCGGTGAACG+TGG 0.564860 3_2:-83381735 None:intergenic
GGTTTATTATTCGGTGAACG+TGG 0.564860 3_2:-83383699 None:intergenic
GTTTGTGTTTGTGTGCATCA+CGG 0.570532 3_2:+83381926 Msa0431300:CDS
GTTTGTGTTTGTGTGCATCA+CGG 0.570532 3_2:+83383890 Msa0431300:CDS
GCGTAAGAGACTAACGACTA+AGG 0.572543 3_2:+83381890 Msa0431300:CDS
GCGTAAGAGACTAACGACTA+AGG 0.572543 3_2:+83383854 Msa0431300:CDS
GTTCTATATAGTGAAAGTAA+AGG 0.574441 3_2:+83386358 Msa0431300:three_prime_UTR
AAAATCTTTAGCAGCTTGGG+TGG 0.582100 3_2:+83385146 Msa0431300:CDS
AACCAAACAAAATGAACCGA+TGG 0.590882 3_2:-83386302 None:intergenic
TGCATAGGGTTGTGAATGGA+TGG 0.590999 3_2:+83381309 None:intergenic
GAAGAAAACAGAAGTGGTGG+TGG 0.592280 3_2:+83381377 Msa0431300:CDS
GAAGAAAACAGAAGTGGTGG+TGG 0.592280 3_2:+83383341 Msa0431300:CDS
CGATGTAAAATTCCGTCACT+CGG 0.593422 3_2:+83386475 Msa0431300:three_prime_UTR
AATAAATTAGGTATTTGGAG+AGG 0.593844 3_2:+83385965 Msa0431300:intron
CTCATCGCAGCTAGTACTTG+CGG 0.594578 3_2:+83385429 Msa0431300:CDS
GCGGAGAAGTGAATTAGTGA+TGG 0.596207 3_2:+83386113 Msa0431300:CDS
CAAGTACTAGCTGCGATGAG+AGG 0.600062 3_2:-83385426 None:intergenic
GGAGACAATGGAAGACTCCA+GGG 0.600835 3_2:-83386509 None:intergenic
TTCACTGCCAAACTGAAACT+AGG 0.601450 3_2:-83386006 None:intergenic
GTGGTGGCAATTTCAAATGT+GGG 0.602248 3_2:+83381393 Msa0431300:CDS
GTGGTGGCAATTTCAAATGT+GGG 0.602248 3_2:+83383357 Msa0431300:CDS
GGACCTGGAGATGCCATCAA+AGG 0.602592 3_2:-83381810 None:intergenic
GGACCTGGAGATGCCATCAA+AGG 0.602592 3_2:-83383774 None:intergenic
GATCAAAGAAAGATTTGACA+TGG 0.605754 3_2:-83382346 None:intergenic
GATCAAAGAAAGATTTGACA+TGG 0.605754 3_2:-83384310 None:intergenic
ATGGAAGAGGCTGAGAAAGT+CGG 0.617688 3_2:+83382428 Msa0431300:CDS
ATGGAAGAGGCTGAGAAAGT+CGG 0.617688 3_2:+83384392 Msa0431300:CDS
CATGATCATGATCTTGGCCA+TGG 0.624053 3_2:-83381431 None:intergenic
CATGATCATGATCTTGGCCA+TGG 0.624053 3_2:-83383395 None:intergenic
GGTGGTGGCAATTTCAAATG+TGG 0.624592 3_2:+83381392 Msa0431300:CDS
GGTGGTGGCAATTTCAAATG+TGG 0.624592 3_2:+83383356 Msa0431300:CDS
GTGGCAATTTCAAATGTGGG+TGG 0.626198 3_2:+83381396 Msa0431300:CDS
GTGGCAATTTCAAATGTGGG+TGG 0.626198 3_2:+83383360 Msa0431300:CDS
AATGAACTTTCAAGAATTTG+GGG 0.631242 3_2:+83386080 Msa0431300:CDS
AGGGATGAACCTTATTTCAG+GGG 0.633053 3_2:-83381517 None:intergenic
AGGGATGAACCTTATTTCAG+GGG 0.633053 3_2:-83383481 None:intergenic
AGGTGGTGAAGTGAGCATGA+TGG 0.635799 3_2:+83381353 Msa0431300:CDS
AGGTGGTGAAGTGAGCATGA+TGG 0.635799 3_2:+83383317 Msa0431300:CDS
GGGGAAGCACAGTTTAAAGG+TGG 0.637546 3_2:-83381498 None:intergenic
GGGGAAGCACAGTTTAAAGG+TGG 0.637546 3_2:-83383462 None:intergenic
TACTGGCACAGGCAGAAACA+GGG 0.640432 3_2:+83385112 Msa0431300:intron
GGTGAAGTTCAACCGAGTGA+CGG 0.641071 3_2:-83386487 None:intergenic
CGTTCACCGAATAATAAACC+CGG 0.641887 3_2:+83381738 Msa0431300:CDS
CGTTCACCGAATAATAAACC+CGG 0.641887 3_2:+83383702 Msa0431300:CDS
AGATACTACCTTATTCCGCA+AGG 0.644323 3_2:+83386168 Msa0431300:CDS
AGGTGTTCATCTCAGACACA+TGG 0.650077 3_2:+83386188 Msa0431300:CDS
AGTTACAGGAGTCCTAGTAG+TGG 0.671864 3_2:+83385345 Msa0431300:CDS
AATAATAATAAGCATCAAGG+TGG 0.672497 3_2:+83383300 Msa0431300:intron
AATAATAATAAGCATCAAGG+TGG 0.674937 3_2:+83381336 Msa0431300:CDS
GATGGAGAAGAAAACAGAAG+TGG 0.675509 3_2:+83381371 Msa0431300:CDS
GATGGAGAAGAAAACAGAAG+TGG 0.675509 3_2:+83383335 Msa0431300:CDS
CTTAAGCGACACTAAAACAG+CGG 0.676974 3_2:+83385303 Msa0431300:CDS
TAGTGGTGACCATAGTAGTG+TGG 0.677764 3_2:+83385362 Msa0431300:CDS
GGAGAAGAAAACAGAAGTGG+TGG 0.683682 3_2:+83381374 Msa0431300:CDS
GGAGAAGAAAACAGAAGTGG+TGG 0.683682 3_2:+83383338 Msa0431300:CDS
GAAGAGGCTGAGAAAGTCGG+CGG 0.686077 3_2:+83382431 Msa0431300:CDS
GAAGAGGCTGAGAAAGTCGG+CGG 0.686077 3_2:+83384395 Msa0431300:CDS
AATTTGGGGAGAAGACCAAG+CGG 0.720680 3_2:+83386094 Msa0431300:CDS
GAGACAATGGAAGACTCCAG+GGG 0.727840 3_2:-83386508 None:intergenic
TGTCTGAGATGAACACCTTG+CGG 0.733097 3_2:-83386183 None:intergenic
TAGATGCAGTGATGAACTCG+AGG 0.741103 3_2:+83382588 Msa0431300:CDS
TAGATGCAGTGATGAACTCG+AGG 0.741103 3_2:+83384552 Msa0431300:CDS
GGTGGAGATAGCCATCACCA+TGG 0.745710 3_2:+83381414 Msa0431300:CDS
GGTGGAGATAGCCATCACCA+TGG 0.745710 3_2:+83383378 Msa0431300:CDS
GGTGACTTTGTAGAGTAACG+AGG 0.754563 3_2:-83381477 None:intergenic
GGTGACTTTGTAGAGTAACG+AGG 0.754563 3_2:-83383441 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAACATTTCAAATATTTTTT+GGG + chr3_2:83385916-83385935 Msa0431300:intron 10.0%
!!! ATGTATTCTTTTAATAAATT+AGG + chr3_2:83385953-83385972 Msa0431300:intron 10.0%
!! AATAATAATAATAAGCATCA+AGG + chr3_2:83381333-83381352 Msa0431300:CDS 15.0%
!! AAGATATAAACTAAATAACT+TGG - chr3_2:83383249-83383268 None:intergenic 15.0%
!!! CTAACATTTCAAATATTTTT+TGG + chr3_2:83385915-83385934 Msa0431300:intron 15.0%
!!! CTTTTAATAAATTAGGTATT+TGG + chr3_2:83385960-83385979 Msa0431300:intron 15.0%
!! AAATGTAAATAAGATTAAGA+TGG + chr3_2:83386038-83386057 Msa0431300:CDS 15.0%
!! AATGTAAATAAGATTAAGAT+GGG + chr3_2:83386039-83386058 Msa0431300:CDS 15.0%
!! AAGAAAGTTGAATTTAGTAA+AGG + chr3_2:83381864-83381883 Msa0431300:CDS 20.0%
!! AAAGAAAGAGATTATTGATA+TGG + chr3_2:83382508-83382527 Msa0431300:CDS 20.0%
!! TAAACAACTTAATTAAGTGT+TGG - chr3_2:83382977-83382996 None:intergenic 20.0%
!! AAGAAAGTTGAATTTAGTAA+AGG + chr3_2:83381864-83381883 Msa0431300:CDS 20.0%
!! TAAACAACTTAATTAAGTGT+TGG - chr3_2:83382977-83382996 None:intergenic 20.0%
!!! ATAATTTTGAAGGCATTAAT+AGG - chr3_2:83385605-83385624 None:intergenic 20.0%
!! CTTGAAACTTAATAATGAAA+AGG + chr3_2:83385670-83385689 Msa0431300:CDS 20.0%
!! GATTATTAAATTATGTATCC+AGG + chr3_2:83386416-83386435 Msa0431300:three_prime_UTR 20.0%
! AATAATAATAAGCATCAAGG+TGG + chr3_2:83381336-83381355 Msa0431300:CDS 25.0%
!! ATCTTACAAGAGTTTTTCTT+GGG - chr3_2:83381590-83381609 None:intergenic 25.0%
! AAGTAACATTCTCTTCTAAA+AGG - chr3_2:83381671-83381690 None:intergenic 25.0%
! TTCTTGTATATGATTTCATC+AGG - chr3_2:83381849-83381868 None:intergenic 25.0%
!! GAACTTTTTGTTGAAGAAAA+AGG + chr3_2:83382103-83382122 Msa0431300:CDS 25.0%
! TAAAGAAATTACCAATGAGA+TGG + chr3_2:83382673-83382692 Msa0431300:CDS 25.0%
! TTATACACTTCTCTTTGTTA+AGG + chr3_2:83382941-83382960 Msa0431300:intron 25.0%
! TATACACTTCTCTTTGTTAA+GGG + chr3_2:83382942-83382961 Msa0431300:intron 25.0%
! AGAGAAGAGTAAATACAATT+AGG - chr3_2:83383011-83383030 None:intergenic 25.0%
! TATATCTTTGTGATATGCAT+AGG + chr3_2:83383261-83383280 Msa0431300:intron 25.0%
! ATATCTTTGTGATATGCATA+GGG + chr3_2:83383262-83383281 Msa0431300:intron 25.0%
! GGTAATAATAATAAGCATCA+AGG + chr3_2:83383297-83383316 Msa0431300:intron 25.0%
! AATAATAATAAGCATCAAGG+TGG + chr3_2:83381336-83381355 Msa0431300:CDS 25.0%
!! ATCTTACAAGAGTTTTTCTT+GGG - chr3_2:83381590-83381609 None:intergenic 25.0%
! AAGTAACATTCTCTTCTAAA+AGG - chr3_2:83381671-83381690 None:intergenic 25.0%
! TTCTTGTATATGATTTCATC+AGG - chr3_2:83381849-83381868 None:intergenic 25.0%
!! GAACTTTTTGTTGAAGAAAA+AGG + chr3_2:83382103-83382122 Msa0431300:CDS 25.0%
! AAAGAAAGAGGTTATTGATA+TGG + chr3_2:83384472-83384491 Msa0431300:CDS 25.0%
! TAAAGAAATTACCAATGAGA+TGG + chr3_2:83382673-83382692 Msa0431300:CDS 25.0%
! TTATACACTTCTCTTTGTTA+AGG + chr3_2:83382941-83382960 Msa0431300:intron 25.0%
! TATACACTTCTCTTTGTTAA+GGG + chr3_2:83382942-83382961 Msa0431300:intron 25.0%
! AGAGAAGAGTAAATACAATT+AGG - chr3_2:83383011-83383030 None:intergenic 25.0%
! CACTGAATGAAAAAATAAAG+AGG + chr3_2:83385813-83385832 Msa0431300:CDS 25.0%
! AGCTAATTGTATAAGTAATC+TGG + chr3_2:83385838-83385857 Msa0431300:intron 25.0%
! AATAAATTAGGTATTTGGAG+AGG + chr3_2:83385965-83385984 Msa0431300:intron 25.0%
! ACAATGAACTTTCAAGAATT+TGG + chr3_2:83386078-83386097 Msa0431300:CDS 25.0%
! CAATGAACTTTCAAGAATTT+GGG + chr3_2:83386079-83386098 Msa0431300:CDS 25.0%
! AATGAACTTTCAAGAATTTG+GGG + chr3_2:83386080-83386099 Msa0431300:CDS 25.0%
! AATTCATGAATCATGATTGT+TGG + chr3_2:83386330-83386349 Msa0431300:three_prime_UTR 25.0%
! ATTCATGAATCATGATTGTT+GGG + chr3_2:83386331-83386350 Msa0431300:three_prime_UTR 25.0%
! GTTCTATATAGTGAAAGTAA+AGG + chr3_2:83386358-83386377 Msa0431300:three_prime_UTR 25.0%
! TCTTACAAGAGTTTTTCTTG+GGG - chr3_2:83381589-83381608 None:intergenic 30.0%
! GATCTTACAAGAGTTTTTCT+TGG - chr3_2:83381591-83381610 None:intergenic 30.0%
TGTTCACCAAATCTTGATTT+GGG - chr3_2:83381627-83381646 None:intergenic 30.0%
TTGTTCACCAAATCTTGATT+TGG - chr3_2:83381628-83381647 None:intergenic 30.0%
CTAAAAGGATTCCATCAATA+GGG - chr3_2:83381656-83381675 None:intergenic 30.0%
TCTAAAAGGATTCCATCAAT+AGG - chr3_2:83381657-83381676 None:intergenic 30.0%
AACAGTTCTATAAACTGTTC+CGG - chr3_2:83381760-83381779 None:intergenic 30.0%
TAACAGTTGAGGAACTAAAA+AGG + chr3_2:83381967-83381986 Msa0431300:CDS 30.0%
CAAAAATGTTCCAATGAGAA+GGG - chr3_2:83382282-83382301 None:intergenic 30.0%
ACAAAAATGTTCCAATGAGA+AGG - chr3_2:83382283-83382302 None:intergenic 30.0%
! TTCTCATTGGAACATTTTTG+TGG + chr3_2:83382282-83382301 Msa0431300:CDS 30.0%
! TCTCATTGGAACATTTTTGT+GGG + chr3_2:83382283-83382302 Msa0431300:CDS 30.0%
! GACATTGTTGCTAAAGATTT+TGG + chr3_2:83382313-83382332 Msa0431300:CDS 30.0%
GATCAAAGAAAGATTTGACA+TGG - chr3_2:83382349-83382368 None:intergenic 30.0%
TGTACTCCTGAAACTAAAAT+GGG - chr3_2:83382471-83382490 None:intergenic 30.0%
TTGTACTCCTGAAACTAAAA+TGG - chr3_2:83382472-83382491 None:intergenic 30.0%
!! TTCATGGACTATGAAGATTT+TGG + chr3_2:83382565-83382584 Msa0431300:CDS 30.0%
ATCTAGAGAATTAGAGATTG+TGG - chr3_2:83382618-83382637 None:intergenic 30.0%
AACATTCCTGAAAACGTAAT+AGG - chr3_2:83382714-83382733 None:intergenic 30.0%
TATATTCTTACTTGCAGCTA+GGG - chr3_2:83382745-83382764 None:intergenic 30.0%
ATATATTCTTACTTGCAGCT+AGG - chr3_2:83382746-83382765 None:intergenic 30.0%
ATTACTTGTAGAGTTGTTGA+TGG + chr3_2:83382773-83382792 Msa0431300:intron 30.0%
TAAGCATTTGCAAGATTGTA+TGG + chr3_2:83382843-83382862 Msa0431300:intron 30.0%
AAAATGCTCCCATTATGAAT+AGG + chr3_2:83383061-83383080 Msa0431300:intron 30.0%
AAATGCTCCCATTATGAATA+GGG + chr3_2:83383062-83383081 Msa0431300:intron 30.0%
TTGATGTCCCTATTCATAAT+GGG - chr3_2:83383072-83383091 None:intergenic 30.0%
! TCTTACAAGAGTTTTTCTTG+GGG - chr3_2:83381589-83381608 None:intergenic 30.0%
! GATCTTACAAGAGTTTTTCT+TGG - chr3_2:83381591-83381610 None:intergenic 30.0%
TGTTCACCAAATCTTGATTT+GGG - chr3_2:83381627-83381646 None:intergenic 30.0%
TTGTTCACCAAATCTTGATT+TGG - chr3_2:83381628-83381647 None:intergenic 30.0%
CTAAAAGGATTCCATCAATA+GGG - chr3_2:83381656-83381675 None:intergenic 30.0%
TCTAAAAGGATTCCATCAAT+AGG - chr3_2:83381657-83381676 None:intergenic 30.0%
AACAGTTCTATAAACTGTTC+CGG - chr3_2:83381760-83381779 None:intergenic 30.0%
TAACAGTTGAGGAACTAAAA+AGG + chr3_2:83381967-83381986 Msa0431300:CDS 30.0%
CAAAAATGTTCCAATGAGAA+GGG - chr3_2:83382282-83382301 None:intergenic 30.0%
ACAAAAATGTTCCAATGAGA+AGG - chr3_2:83382283-83382302 None:intergenic 30.0%
! TTCTCATTGGAACATTTTTG+TGG + chr3_2:83382282-83382301 Msa0431300:CDS 30.0%
! TCTCATTGGAACATTTTTGT+GGG + chr3_2:83382283-83382302 Msa0431300:CDS 30.0%
! GACATTGTTGCTAAAGATTT+TGG + chr3_2:83382313-83382332 Msa0431300:CDS 30.0%
GATCAAAGAAAGATTTGACA+TGG - chr3_2:83382349-83382368 None:intergenic 30.0%
TGTACTCCTGAAACTAAAAT+GGG - chr3_2:83382471-83382490 None:intergenic 30.0%
TTGTACTCCTGAAACTAAAA+TGG - chr3_2:83382472-83382491 None:intergenic 30.0%
!! TTCATGGACTATGAAGATTT+TGG + chr3_2:83382565-83382584 Msa0431300:CDS 30.0%
ATCTAGAGAATTAGAGATTG+TGG - chr3_2:83382618-83382637 None:intergenic 30.0%
AACATTCCTGAAAACGTAAT+AGG - chr3_2:83382714-83382733 None:intergenic 30.0%
TATATTCTTACTTGCAGCTA+GGG - chr3_2:83382745-83382764 None:intergenic 30.0%
ATATATTCTTACTTGCAGCT+AGG - chr3_2:83382746-83382765 None:intergenic 30.0%
ATTACTTGTAGAGTTGTTGA+TGG + chr3_2:83382773-83382792 Msa0431300:intron 30.0%
AAAATGCTCCCATTATGAAT+AGG + chr3_2:83383061-83383080 Msa0431300:intron 30.0%
AAATGCTCCCATTATGAATA+GGG + chr3_2:83383062-83383081 Msa0431300:intron 30.0%
TTACAGATTGAGATTCTGTT+TGG + chr3_2:83385219-83385238 Msa0431300:intron 30.0%
ACTGGAAAATACAGAGATTA+TGG - chr3_2:83385246-83385265 None:intergenic 30.0%
CAATTAAACAAGCTAGTTAC+AGG + chr3_2:83385331-83385350 Msa0431300:CDS 30.0%
! TAGCTGCAAGATAATTTTGA+AGG - chr3_2:83385615-83385634 None:intergenic 30.0%
CAAAATTATCTTGCAGCTAT+TGG + chr3_2:83385616-83385635 Msa0431300:intron 30.0%
!! ATAATTGCTGATCGGTTTTA+TGG - chr3_2:83385720-83385739 None:intergenic 30.0%
CTTCTGTAATAATTGCTGAT+CGG - chr3_2:83385728-83385747 None:intergenic 30.0%
TTATTACAGAAGCCCTAATA+TGG + chr3_2:83385736-83385755 Msa0431300:CDS 30.0%
TATTACAGAAGCCCTAATAT+GGG + chr3_2:83385737-83385756 Msa0431300:CDS 30.0%
! TTTGAAATGTTAGCCGAATA+TGG - chr3_2:83385908-83385927 None:intergenic 30.0%
CACTTAAGATAACTTGAATC+AGG - chr3_2:83386216-83386235 None:intergenic 30.0%
GAAGTTTCATCTTAATGAGA+AGG - chr3_2:83386244-83386263 None:intergenic 30.0%
ACCAGTTATTATATCTATGC+CGG - chr3_2:83386533-83386552 None:intergenic 30.0%
TCAACTCATGATCATGATCT+TGG - chr3_2:83381440-83381459 None:intergenic 35.0%
! TAGGGATGAACCTTATTTCA+GGG - chr3_2:83381521-83381540 None:intergenic 35.0%
! GTAAGGTTTTCATTTGTAGC+AGG - chr3_2:83381567-83381586 None:intergenic 35.0%
TCTAAGCCCAAATCAAGATT+TGG + chr3_2:83381618-83381637 Msa0431300:CDS 35.0%
ACTGTTCCGGGTTTATTATT+CGG - chr3_2:83381747-83381766 None:intergenic 35.0%
ACAGTTCTATAAACTGTTCC+GGG - chr3_2:83381759-83381778 None:intergenic 35.0%
AGTTGAGGAACTAAAAAGGA+CGG + chr3_2:83381971-83381990 Msa0431300:CDS 35.0%
AACTAAAAAGGACGGAGATT+TGG + chr3_2:83381979-83381998 Msa0431300:CDS 35.0%
!!! AAGGTGCTTTATTTTGTCCA+TGG + chr3_2:83382122-83382141 Msa0431300:CDS 35.0%
! AATGTATCCAGGTTTTCACT+TGG + chr3_2:83382153-83382172 Msa0431300:CDS 35.0%
! TAAATTGGCCACGAAGATTT+TGG + chr3_2:83382232-83382251 Msa0431300:CDS 35.0%
! AGATTTTGGATGGTGTAACA+TGG + chr3_2:83382246-83382265 Msa0431300:CDS 35.0%
TTTCTTTGTGCTACCTTTAC+TGG - chr3_2:83382495-83382514 None:intergenic 35.0%
AGCAAGAGAAAGTTTCTTCA+TGG + chr3_2:83382549-83382568 Msa0431300:CDS 35.0%
ATATTCTTACTTGCAGCTAG+GGG - chr3_2:83382744-83382763 None:intergenic 35.0%
!! TAGAGTTGTTGATGGTTGTA+AGG + chr3_2:83382781-83382800 Msa0431300:intron 35.0%
!! AGAGTTGTTGATGGTTGTAA+GGG + chr3_2:83382782-83382801 Msa0431300:intron 35.0%
! CTTACTTGTGTTGATCTACT+AGG + chr3_2:83382819-83382838 Msa0431300:intron 35.0%
GTTGATGTCCCTATTCATAA+TGG - chr3_2:83383073-83383092 None:intergenic 35.0%
CTTCCTTAATCAAGAACCTA+CGG - chr3_2:83383107-83383126 None:intergenic 35.0%
TCAACTCATGATCATGATCT+TGG - chr3_2:83381440-83381459 None:intergenic 35.0%
! TAGGGATGAACCTTATTTCA+GGG - chr3_2:83381521-83381540 None:intergenic 35.0%
! GTAAGGTTTTCATTTGTAGC+AGG - chr3_2:83381567-83381586 None:intergenic 35.0%
TCTAAGCCCAAATCAAGATT+TGG + chr3_2:83381618-83381637 Msa0431300:CDS 35.0%
ACTGTTCCGGGTTTATTATT+CGG - chr3_2:83381747-83381766 None:intergenic 35.0%
ACAGTTCTATAAACTGTTCC+GGG - chr3_2:83381759-83381778 None:intergenic 35.0%
AGTTGAGGAACTAAAAAGGA+CGG + chr3_2:83381971-83381990 Msa0431300:CDS 35.0%
AACTAAAAAGGACGGAGATT+TGG + chr3_2:83381979-83381998 Msa0431300:CDS 35.0%
!!! AAGGTGCTTTATTTTGTCCA+TGG + chr3_2:83382122-83382141 Msa0431300:CDS 35.0%
! AATGTATCCAGGTTTTCACT+TGG + chr3_2:83382153-83382172 Msa0431300:CDS 35.0%
! TAAATTGGCCACGAAGATTT+TGG + chr3_2:83382232-83382251 Msa0431300:CDS 35.0%
! AGATTTTGGATGGTGTAACA+TGG + chr3_2:83382246-83382265 Msa0431300:CDS 35.0%
TTTCTTTGTGCTACCTTTAC+TGG - chr3_2:83382495-83382514 None:intergenic 35.0%
TAAAGGTAGCACAAAGAAAG+AGG + chr3_2:83382496-83382515 Msa0431300:CDS 35.0%
AGCAAGAGAAAGTTTCTTCA+TGG + chr3_2:83382549-83382568 Msa0431300:CDS 35.0%
ATATTCTTACTTGCAGCTAG+GGG - chr3_2:83382744-83382763 None:intergenic 35.0%
!! TAGAGTTGTTGATGGTTGTA+AGG + chr3_2:83382781-83382800 Msa0431300:intron 35.0%
!! AGAGTTGTTGATGGTTGTAA+GGG + chr3_2:83382782-83382801 Msa0431300:intron 35.0%
! CTTACTTGTGTTGATCTACT+AGG + chr3_2:83382819-83382838 Msa0431300:intron 35.0%
TCGATGTCCCTATTCATAAT+GGG - chr3_2:83385036-83385055 None:intergenic 35.0%
CTTCCTTAATCAAGAACCTA+CGG - chr3_2:83383107-83383126 None:intergenic 35.0%
GATTAAGGAAGAAGTTCCTT+TGG + chr3_2:83383116-83383135 Msa0431300:intron 35.0%
CAGAAAATCTTTAGCAGCTT+GGG + chr3_2:83385143-83385162 Msa0431300:CDS 35.0%
! TCTCTGTATTTTCCAGTTGA+AGG + chr3_2:83385249-83385268 Msa0431300:intron 35.0%
GTTCTTGATATACCTTCAAC+TGG - chr3_2:83385264-83385283 None:intergenic 35.0%
CATTACAAACACGAAGATGA+TGG - chr3_2:83385494-83385513 None:intergenic 35.0%
GTAATGCATCCATTTGATGT+TGG + chr3_2:83385508-83385527 Msa0431300:CDS 35.0%
!! ATGTTTTATAGATGGTGTCG+AGG + chr3_2:83385537-83385556 Msa0431300:CDS 35.0%
!! ATGTGCTCCTTTTGTTTCTT+TGG + chr3_2:83386268-83386287 Msa0431300:three_prime_UTR 35.0%
TGACAGACCAAAGAAACAAA+AGG - chr3_2:83386278-83386297 None:intergenic 35.0%
TTTGGTCTGTCAAATACCAT+CGG + chr3_2:83386286-83386305 Msa0431300:three_prime_UTR 35.0%
!!! TACCATCGGTTCATTTTGTT+TGG + chr3_2:83386300-83386319 Msa0431300:three_prime_UTR 35.0%
AACCAAACAAAATGAACCGA+TGG - chr3_2:83386305-83386324 None:intergenic 35.0%
TCCGGCATAGATATAATAAC+TGG + chr3_2:83386529-83386548 Msa0431300:three_prime_UTR 35.0%
GATGGAGAAGAAAACAGAAG+TGG + chr3_2:83381371-83381390 Msa0431300:CDS 40.0%
GTGGTGGCAATTTCAAATGT+GGG + chr3_2:83381393-83381412 Msa0431300:CDS 40.0%
! AGGGATGAACCTTATTTCAG+GGG - chr3_2:83381520-83381539 None:intergenic 40.0%
! CTAGGGATGAACCTTATTTC+AGG - chr3_2:83381522-83381541 None:intergenic 40.0%
!! GAGCTTTTGGGGGTTTATTT+GGG - chr3_2:83381545-83381564 None:intergenic 40.0%
! ATTTGTAGCAGGAGCTTTTG+GGG - chr3_2:83381556-83381575 None:intergenic 40.0%
! CATTTGTAGCAGGAGCTTTT+GGG - chr3_2:83381557-83381576 None:intergenic 40.0%
! TCATTTGTAGCAGGAGCTTT+TGG - chr3_2:83381558-83381577 None:intergenic 40.0%
! CAAGAGTTTTTCTTGGGGTA+AGG - chr3_2:83381584-83381603 None:intergenic 40.0%
GAACAACCTTACCCTATTGA+TGG + chr3_2:83381642-83381661 Msa0431300:CDS 40.0%
AGGATTCCATCAATAGGGTA+AGG - chr3_2:83381651-83381670 None:intergenic 40.0%
! GGTTTATTATTCGGTGAACG+TGG - chr3_2:83381738-83381757 None:intergenic 40.0%
CGTTCACCGAATAATAAACC+CGG + chr3_2:83381738-83381757 Msa0431300:CDS 40.0%
GTTTGTGTTTGTGTGCATCA+CGG + chr3_2:83381926-83381945 Msa0431300:CDS 40.0%
TTTGTGTTTGTGTGCATCAC+GGG + chr3_2:83381927-83381946 Msa0431300:CDS 40.0%
!! GTTGGCTAGTTTAACAGTTG+AGG + chr3_2:83381956-83381975 Msa0431300:CDS 40.0%
!! CTTGTGATGGTGACATTTTG+TGG + chr3_2:83382029-83382048 Msa0431300:CDS 40.0%
GTGGCATGTTAGTTACCAAA+TGG + chr3_2:83382048-83382067 Msa0431300:CDS 40.0%
GGATACATTTCTTCAGTCCA+TGG - chr3_2:83382142-83382161 None:intergenic 40.0%
TGGACTGAAGAAATGTATCC+AGG + chr3_2:83382142-83382161 Msa0431300:CDS 40.0%
! TGGGTGCTTTTAATCAATCG+TGG + chr3_2:83382197-83382216 Msa0431300:CDS 40.0%
TGGAGTCGAACGATCTAAAT+TGG + chr3_2:83382217-83382236 Msa0431300:CDS 40.0%
TACACCATCCAAAATCTTCG+TGG - chr3_2:83382243-83382262 None:intergenic 40.0%
! ACTCTTGTTTCCCTTCTCAT+TGG + chr3_2:83382269-83382288 Msa0431300:CDS 40.0%
GAGTCTGCAGAACATATTGA+TGG - chr3_2:83382391-83382410 None:intergenic 40.0%
!!! GCACTTCCCATTTTAGTTTC+AGG + chr3_2:83382462-83382481 Msa0431300:CDS 40.0%
! TTCAGGAGTACAACCAGTAA+AGG + chr3_2:83382479-83382498 Msa0431300:CDS 40.0%
TATGAATAGGGACATCAACG+AGG + chr3_2:83383074-83383093 Msa0431300:intron 40.0%
ACTCCGTAGGTTCTTGATTA+AGG + chr3_2:83383101-83383120 Msa0431300:intron 40.0%
GATATGCATAGGGTTGTGAA+TGG + chr3_2:83383272-83383291 Msa0431300:intron 40.0%
GATGGAGAAGAAAACAGAAG+TGG + chr3_2:83381371-83381390 Msa0431300:CDS 40.0%
GTGGTGGCAATTTCAAATGT+GGG + chr3_2:83381393-83381412 Msa0431300:CDS 40.0%
! AGGGATGAACCTTATTTCAG+GGG - chr3_2:83381520-83381539 None:intergenic 40.0%
! CTAGGGATGAACCTTATTTC+AGG - chr3_2:83381522-83381541 None:intergenic 40.0%
!! GAGCTTTTGGGGGTTTATTT+GGG - chr3_2:83381545-83381564 None:intergenic 40.0%
! ATTTGTAGCAGGAGCTTTTG+GGG - chr3_2:83381556-83381575 None:intergenic 40.0%
! CATTTGTAGCAGGAGCTTTT+GGG - chr3_2:83381557-83381576 None:intergenic 40.0%
! TCATTTGTAGCAGGAGCTTT+TGG - chr3_2:83381558-83381577 None:intergenic 40.0%
! CAAGAGTTTTTCTTGGGGTA+AGG - chr3_2:83381584-83381603 None:intergenic 40.0%
GAACAACCTTACCCTATTGA+TGG + chr3_2:83381642-83381661 Msa0431300:CDS 40.0%
AGGATTCCATCAATAGGGTA+AGG - chr3_2:83381651-83381670 None:intergenic 40.0%
! GGTTTATTATTCGGTGAACG+TGG - chr3_2:83381738-83381757 None:intergenic 40.0%
CGTTCACCGAATAATAAACC+CGG + chr3_2:83381738-83381757 Msa0431300:CDS 40.0%
GTTTGTGTTTGTGTGCATCA+CGG + chr3_2:83381926-83381945 Msa0431300:CDS 40.0%
TTTGTGTTTGTGTGCATCAC+GGG + chr3_2:83381927-83381946 Msa0431300:CDS 40.0%
!! GTTGGCTAGTTTAACAGTTG+AGG + chr3_2:83381956-83381975 Msa0431300:CDS 40.0%
!! CTTGTGATGGTGACATTTTG+TGG + chr3_2:83382029-83382048 Msa0431300:CDS 40.0%
GTGGCATGTTAGTTACCAAA+TGG + chr3_2:83382048-83382067 Msa0431300:CDS 40.0%
GGATACATTTCTTCAGTCCA+TGG - chr3_2:83382142-83382161 None:intergenic 40.0%
TGGACTGAAGAAATGTATCC+AGG + chr3_2:83382142-83382161 Msa0431300:CDS 40.0%
! TGGGTGCTTTTAATCAATCG+TGG + chr3_2:83382197-83382216 Msa0431300:CDS 40.0%
TGGAGTCGAACGATCTAAAT+TGG + chr3_2:83382217-83382236 Msa0431300:CDS 40.0%
TACACCATCCAAAATCTTCG+TGG - chr3_2:83382243-83382262 None:intergenic 40.0%
! ACTCTTGTTTCCCTTCTCAT+TGG + chr3_2:83382269-83382288 Msa0431300:CDS 40.0%
GAGTCTGCAGAACATATTGA+TGG - chr3_2:83382391-83382410 None:intergenic 40.0%
!!! GCACTTCCCATTTTAGTTTC+AGG + chr3_2:83382462-83382481 Msa0431300:CDS 40.0%
! TTCAGGAGTACAACCAGTAA+AGG + chr3_2:83382479-83382498 Msa0431300:CDS 40.0%
GTCGATGTCCCTATTCATAA+TGG - chr3_2:83385037-83385056 None:intergenic 40.0%
ACTCCGTAGGTTCTTGATTA+AGG + chr3_2:83383101-83383120 Msa0431300:intron 40.0%
! CCAAGCTGCTAAAGATTTTC+TGG - chr3_2:83385145-83385164 None:intergenic 40.0%
CCAGAAAATCTTTAGCAGCT+TGG + chr3_2:83385142-83385161 Msa0431300:CDS 40.0%
AAAATCTTTAGCAGCTTGGG+TGG + chr3_2:83385146-83385165 Msa0431300:CDS 40.0%
CTTAAGCGACACTAAAACAG+CGG + chr3_2:83385303-83385322 Msa0431300:CDS 40.0%
TAGAAGAAGCCACACTACTA+TGG - chr3_2:83385374-83385393 None:intergenic 40.0%
AGTAGTGTGGCTTCTTCTAA+TGG + chr3_2:83385375-83385394 Msa0431300:CDS 40.0%
! GGCGATCGATGTTTTATAGA+TGG + chr3_2:83385529-83385548 Msa0431300:CDS 40.0%
TTTATGGCTAGGACAGAGTT+TGG - chr3_2:83385704-83385723 None:intergenic 40.0%
CTACACTGTCACCCATATTA+GGG - chr3_2:83385751-83385770 None:intergenic 40.0%
TCTACACTGTCACCCATATT+AGG - chr3_2:83385752-83385771 None:intergenic 40.0%
AAACTAGGATGCCAGTATTG+TGG - chr3_2:83385994-83386013 None:intergenic 40.0%
TTCACTGCCAAACTGAAACT+AGG - chr3_2:83386009-83386028 None:intergenic 40.0%
TAGTTTCAGTTTGGCAGTGA+AGG + chr3_2:83386008-83386027 Msa0431300:CDS 40.0%
AGATACTACCTTATTCCGCA+AGG + chr3_2:83386168-83386187 Msa0431300:CDS 40.0%
TGAATCATGATTGTTGGGAG+TGG + chr3_2:83386336-83386355 Msa0431300:three_prime_UTR 40.0%
GTGAAAGTAAAGGCCTTAAC+AGG + chr3_2:83386368-83386387 Msa0431300:three_prime_UTR 40.0%
GTTGCTAACATTGCCTGTTA+AGG - chr3_2:83386384-83386403 None:intergenic 40.0%
!! CGAGTGACGGAATTTTACAT+CGG - chr3_2:83386477-83386496 None:intergenic 40.0%
CGATGTAAAATTCCGTCACT+CGG + chr3_2:83386475-83386494 Msa0431300:three_prime_UTR 40.0%
TATATCTATGCCGGAGACAA+TGG - chr3_2:83386524-83386543 None:intergenic 40.0%
GGAGAAGAAAACAGAAGTGG+TGG + chr3_2:83381374-83381393 Msa0431300:CDS 45.0%
GAAGAAAACAGAAGTGGTGG+TGG + chr3_2:83381377-83381396 Msa0431300:CDS 45.0%
! GGTGGTGGCAATTTCAAATG+TGG + chr3_2:83381392-83381411 Msa0431300:CDS 45.0%
GTGGCAATTTCAAATGTGGG+TGG + chr3_2:83381396-83381415 Msa0431300:CDS 45.0%
CATGATCATGATCTTGGCCA+TGG - chr3_2:83381434-83381453 None:intergenic 45.0%
GGTGACTTTGTAGAGTAACG+AGG - chr3_2:83381480-83381499 None:intergenic 45.0%
! TCAGGGGAAGCACAGTTTAA+AGG - chr3_2:83381504-83381523 None:intergenic 45.0%
ACTGTGCTTCCCCTGAAATA+AGG + chr3_2:83381508-83381527 Msa0431300:CDS 45.0%
TTGGGGGTTTATTTGGGCTA+GGG - chr3_2:83381539-83381558 None:intergenic 45.0%
TTTGGGGGTTTATTTGGGCT+AGG - chr3_2:83381540-83381559 None:intergenic 45.0%
!! GGAGCTTTTGGGGGTTTATT+TGG - chr3_2:83381546-83381565 None:intergenic 45.0%
! TTTGTAGCAGGAGCTTTTGG+GGG - chr3_2:83381555-83381574 None:intergenic 45.0%
GGTGAACGTGGTGCTTTATA+TGG - chr3_2:83381726-83381745 None:intergenic 45.0%
CACTCCTAGAACACCTTTGA+TGG + chr3_2:83381797-83381816 Msa0431300:CDS 45.0%
!! GATGCCATCAAAGGTGTTCT+AGG - chr3_2:83381804-83381823 None:intergenic 45.0%
GCGTAAGAGACTAACGACTA+AGG + chr3_2:83381890-83381909 Msa0431300:CDS 45.0%
! AAGGACGGAGATTTGGAGTT+TGG + chr3_2:83381986-83382005 Msa0431300:CDS 45.0%
! AGGACGGAGATTTGGAGTTT+GGG + chr3_2:83381987-83382006 Msa0431300:CDS 45.0%
! AGATTTGGAGTTTGGGGCTT+TGG + chr3_2:83381994-83382013 Msa0431300:CDS 45.0%
GACAATGTGCGTGAACCATT+TGG - chr3_2:83382066-83382085 None:intergenic 45.0%
AAGCGATCCAAGTGAAAACC+TGG - chr3_2:83382163-83382182 None:intergenic 45.0%
! GGTTTTCACTTGGATCGCTT+TGG + chr3_2:83382163-83382182 Msa0431300:CDS 45.0%
!! TCGCTTTGGTTCTACTCACA+TGG + chr3_2:83382177-83382196 Msa0431300:CDS 45.0%
!! CGCTTTGGTTCTACTCACAT+GGG + chr3_2:83382178-83382197 Msa0431300:CDS 45.0%
! TTGGCCACGAAGATTTTGGA+TGG + chr3_2:83382236-83382255 Msa0431300:CDS 45.0%
TATGTTCTGCAGACTCTCTC+TGG + chr3_2:83382395-83382414 Msa0431300:CDS 45.0%
ATGTTCTGCAGACTCTCTCT+GGG + chr3_2:83382396-83382415 Msa0431300:CDS 45.0%
TTCTCAGCCTCTTCCATTAG+TGG - chr3_2:83382425-83382444 None:intergenic 45.0%
ATGGAAGAGGCTGAGAAAGT+CGG + chr3_2:83382428-83382447 Msa0431300:CDS 45.0%
TAGATGCAGTGATGAACTCG+AGG + chr3_2:83382588-83382607 Msa0431300:CDS 45.0%
AGCAGTTGCTTCCATCTCAT+TGG - chr3_2:83382687-83382706 None:intergenic 45.0%
! CTGCTGCCTATTACGTTTTC+AGG + chr3_2:83382705-83382724 Msa0431300:CDS 45.0%
! GATGGTTGTAAGGGCATGTT+TGG + chr3_2:83382791-83382810 Msa0431300:intron 45.0%
TGCATAGGGTTGTGAATGGA+TGG + chr3_2:83383276-83383295 Msa0431300:intron 45.0%
GGAGAAGAAAACAGAAGTGG+TGG + chr3_2:83381374-83381393 Msa0431300:CDS 45.0%
GAAGAAAACAGAAGTGGTGG+TGG + chr3_2:83381377-83381396 Msa0431300:CDS 45.0%
! GGTGGTGGCAATTTCAAATG+TGG + chr3_2:83381392-83381411 Msa0431300:CDS 45.0%
GTGGCAATTTCAAATGTGGG+TGG + chr3_2:83381396-83381415 Msa0431300:CDS 45.0%
CATGATCATGATCTTGGCCA+TGG - chr3_2:83381434-83381453 None:intergenic 45.0%
GGTGACTTTGTAGAGTAACG+AGG - chr3_2:83381480-83381499 None:intergenic 45.0%
! TCAGGGGAAGCACAGTTTAA+AGG - chr3_2:83381504-83381523 None:intergenic 45.0%
ACTGTGCTTCCCCTGAAATA+AGG + chr3_2:83381508-83381527 Msa0431300:CDS 45.0%
TTGGGGGTTTATTTGGGCTA+GGG - chr3_2:83381539-83381558 None:intergenic 45.0%
TTTGGGGGTTTATTTGGGCT+AGG - chr3_2:83381540-83381559 None:intergenic 45.0%
!! GGAGCTTTTGGGGGTTTATT+TGG - chr3_2:83381546-83381565 None:intergenic 45.0%
! TTTGTAGCAGGAGCTTTTGG+GGG - chr3_2:83381555-83381574 None:intergenic 45.0%
GGTGAACGTGGTGCTTTATA+TGG - chr3_2:83381726-83381745 None:intergenic 45.0%
CACTCCTAGAACACCTTTGA+TGG + chr3_2:83381797-83381816 Msa0431300:CDS 45.0%
!! GATGCCATCAAAGGTGTTCT+AGG - chr3_2:83381804-83381823 None:intergenic 45.0%
GCGTAAGAGACTAACGACTA+AGG + chr3_2:83381890-83381909 Msa0431300:CDS 45.0%
! AAGGACGGAGATTTGGAGTT+TGG + chr3_2:83381986-83382005 Msa0431300:CDS 45.0%
! AGGACGGAGATTTGGAGTTT+GGG + chr3_2:83381987-83382006 Msa0431300:CDS 45.0%
! AGATTTGGAGTTTGGGGCTT+TGG + chr3_2:83381994-83382013 Msa0431300:CDS 45.0%
GACAATGTGCGTGAACCATT+TGG - chr3_2:83382066-83382085 None:intergenic 45.0%
AAGCGATCCAAGTGAAAACC+TGG - chr3_2:83382163-83382182 None:intergenic 45.0%
! GGTTTTCACTTGGATCGCTT+TGG + chr3_2:83382163-83382182 Msa0431300:CDS 45.0%
!! TCGCTTTGGTTCTACTCACA+TGG + chr3_2:83382177-83382196 Msa0431300:CDS 45.0%
!! CGCTTTGGTTCTACTCACAT+GGG + chr3_2:83382178-83382197 Msa0431300:CDS 45.0%
! TTGGCCACGAAGATTTTGGA+TGG + chr3_2:83382236-83382255 Msa0431300:CDS 45.0%
TATGTTCTGCAGACTCTCTC+TGG + chr3_2:83382395-83382414 Msa0431300:CDS 45.0%
ATGTTCTGCAGACTCTCTCT+GGG + chr3_2:83382396-83382415 Msa0431300:CDS 45.0%
TTCTCAGCCTCTTCCATTAG+TGG - chr3_2:83382425-83382444 None:intergenic 45.0%
ATGGAAGAGGCTGAGAAAGT+CGG + chr3_2:83382428-83382447 Msa0431300:CDS 45.0%
TAGATGCAGTGATGAACTCG+AGG + chr3_2:83382588-83382607 Msa0431300:CDS 45.0%
AGCAGTTGCTTCCATCTCAT+TGG - chr3_2:83382687-83382706 None:intergenic 45.0%
! CTGCTGCCTATTACGTTTTC+AGG + chr3_2:83382705-83382724 Msa0431300:CDS 45.0%
! GATGGTTGTAAGGGCATGTT+TGG + chr3_2:83382791-83382810 Msa0431300:intron 45.0%
TATGAATAGGGACATCGACG+AGG + chr3_2:83385038-83385057 Msa0431300:intron 45.0%
TCCTTTGGTATTTCCCCTAC+TGG + chr3_2:83385095-83385114 Msa0431300:intron 45.0%
!!! CGCTGTTTTAGTGTCGCTTA+AGG - chr3_2:83385305-83385324 None:intergenic 45.0%
AGTTACAGGAGTCCTAGTAG+TGG + chr3_2:83385345-83385364 Msa0431300:CDS 45.0%
CTACTATGGTCACCACTACT+AGG - chr3_2:83385360-83385379 None:intergenic 45.0%
TAGTGGTGACCATAGTAGTG+TGG + chr3_2:83385362-83385381 Msa0431300:CDS 45.0%
GTACTTGCGGCTTTCATGTT+TGG + chr3_2:83385442-83385461 Msa0431300:CDS 45.0%
CATCGATCGCCAACATCAAA+TGG - chr3_2:83385520-83385539 None:intergenic 45.0%
!! TGCTGATCGGTTTTATGGCT+AGG - chr3_2:83385715-83385734 None:intergenic 45.0%
ACGACGTCAGCAGAGAAAAT+CGG + chr3_2:83385788-83385807 Msa0431300:CDS 45.0%
TATGGCCAACAGTCGAGTTA+GGG - chr3_2:83385890-83385909 None:intergenic 45.0%
ATATGGCCAACAGTCGAGTT+AGG - chr3_2:83385891-83385910 None:intergenic 45.0%
ACTCGACTGTTGGCCATATT+CGG + chr3_2:83385892-83385911 Msa0431300:intron 45.0%
TGGAGAGGAATCCACAATAC+TGG + chr3_2:83385980-83385999 Msa0431300:CDS 45.0%
CTGGCATCCTAGTTTCAGTT+TGG + chr3_2:83385999-83386018 Msa0431300:CDS 45.0%
AATTTGGGGAGAAGACCAAG+CGG + chr3_2:83386094-83386113 Msa0431300:CDS 45.0%
CACTAATTCACTTCTCCGCT+TGG - chr3_2:83386112-83386131 None:intergenic 45.0%
GCGGAGAAGTGAATTAGTGA+TGG + chr3_2:83386113-83386132 Msa0431300:CDS 45.0%
GATGAACACCTTGCGGAATA+AGG - chr3_2:83386179-83386198 None:intergenic 45.0%
! TGTCTGAGATGAACACCTTG+CGG - chr3_2:83386186-83386205 None:intergenic 45.0%
AGGTGTTCATCTCAGACACA+TGG + chr3_2:83386188-83386207 Msa0431300:CDS 45.0%
TACGAAAGACTTGAGAGTCC+TGG - chr3_2:83386437-83386456 None:intergenic 45.0%
CTTTCGTACCAACGTTGAAG+TGG + chr3_2:83386449-83386468 Msa0431300:three_prime_UTR 45.0%
AGGTGGTGAAGTGAGCATGA+TGG + chr3_2:83381353-83381372 Msa0431300:CDS 50.0%
CATGATCTTGGCCATGGTGA+TGG - chr3_2:83381428-83381447 None:intergenic 50.0%
! GGGGAAGCACAGTTTAAAGG+TGG - chr3_2:83381501-83381520 None:intergenic 50.0%
! ACACCTTTGATGGCATCTCC+AGG + chr3_2:83381807-83381826 Msa0431300:CDS 50.0%
! GGACGGAGATTTGGAGTTTG+GGG + chr3_2:83381988-83382007 Msa0431300:CDS 50.0%
! TTTGGAGTTTGGGGCTTTGG+AGG + chr3_2:83381997-83382016 Msa0431300:CDS 50.0%
GAGGTGGTGTATGCTTGTGA+TGG + chr3_2:83382016-83382035 Msa0431300:CDS 50.0%
TCAGCCTCTTCCATTAGTGG+AGG - chr3_2:83382422-83382441 None:intergenic 50.0%
TCAACGAGGATGAACTCCGT+AGG + chr3_2:83383088-83383107 Msa0431300:intron 50.0%
AGGTGGTGAAGTGAGCATGA+TGG + chr3_2:83381353-83381372 Msa0431300:CDS 50.0%
CATGATCTTGGCCATGGTGA+TGG - chr3_2:83381428-83381447 None:intergenic 50.0%
! GGGGAAGCACAGTTTAAAGG+TGG - chr3_2:83381501-83381520 None:intergenic 50.0%
! ACACCTTTGATGGCATCTCC+AGG + chr3_2:83381807-83381826 Msa0431300:CDS 50.0%
! GGACGGAGATTTGGAGTTTG+GGG + chr3_2:83381988-83382007 Msa0431300:CDS 50.0%
! TTTGGAGTTTGGGGCTTTGG+AGG + chr3_2:83381997-83382016 Msa0431300:CDS 50.0%
GAGGTGGTGTATGCTTGTGA+TGG + chr3_2:83382016-83382035 Msa0431300:CDS 50.0%
TCAGCCTCTTCCATTAGTGG+AGG - chr3_2:83382422-83382441 None:intergenic 50.0%
GCCAGTAGGGGAAATACCAA+AGG - chr3_2:83385099-83385118 None:intergenic 50.0%
! TGTTTCTGCCTGTGCCAGTA+GGG - chr3_2:83385112-83385131 None:intergenic 50.0%
TACTGGCACAGGCAGAAACA+GGG + chr3_2:83385112-83385131 Msa0431300:intron 50.0%
CTTTAGCAGCTTGGGTGGTA+AGG + chr3_2:83385151-83385170 Msa0431300:intron 50.0%
CAAGTACTAGCTGCGATGAG+AGG - chr3_2:83385429-83385448 None:intergenic 50.0%
CTCATCGCAGCTAGTACTTG+CGG + chr3_2:83385429-83385448 Msa0431300:CDS 50.0%
ATGGCCAACAGTCGAGTTAG+GGG - chr3_2:83385889-83385908 None:intergenic 50.0%
CATCGGATCCACTTCAACGT+TGG - chr3_2:83386460-83386479 None:intergenic 50.0%
GGTGAAGTTCAACCGAGTGA+CGG - chr3_2:83386490-83386509 None:intergenic 50.0%
GAGACAATGGAAGACTCCAG+GGG - chr3_2:83386511-83386530 None:intergenic 50.0%
GGAGACAATGGAAGACTCCA+GGG - chr3_2:83386512-83386531 None:intergenic 50.0%
CTGGAGTCTTCCATTGTCTC+CGG + chr3_2:83386511-83386530 Msa0431300:three_prime_UTR 50.0%
GGTGGAGATAGCCATCACCA+TGG + chr3_2:83381414-83381433 Msa0431300:CDS 55.0%
GGACCTGGAGATGCCATCAA+AGG - chr3_2:83381813-83381832 None:intergenic 55.0%
TCATCAGGATCCTCACCAGC+TGG - chr3_2:83381834-83381853 None:intergenic 55.0%
! GTGCATCACGGGTAGCTTGT+TGG + chr3_2:83381938-83381957 Msa0431300:CDS 55.0%
TCTCTCTGGGCCTCCACTAA+TGG + chr3_2:83382409-83382428 Msa0431300:CDS 55.0%
TGGGCCTCCACTAATGGAAG+AGG + chr3_2:83382415-83382434 Msa0431300:CDS 55.0%
GAAGAGGCTGAGAAAGTCGG+CGG + chr3_2:83382431-83382450 Msa0431300:CDS 55.0%
GGTGGAGATAGCCATCACCA+TGG + chr3_2:83381414-83381433 Msa0431300:CDS 55.0%
GGACCTGGAGATGCCATCAA+AGG - chr3_2:83381813-83381832 None:intergenic 55.0%
TCATCAGGATCCTCACCAGC+TGG - chr3_2:83381834-83381853 None:intergenic 55.0%
! GTGCATCACGGGTAGCTTGT+TGG + chr3_2:83381938-83381957 Msa0431300:CDS 55.0%
TCTCTCTGGGCCTCCACTAA+TGG + chr3_2:83382409-83382428 Msa0431300:CDS 55.0%
TGGGCCTCCACTAATGGAAG+AGG + chr3_2:83382415-83382434 Msa0431300:CDS 55.0%
GAAGAGGCTGAGAAAGTCGG+CGG + chr3_2:83382431-83382450 Msa0431300:CDS 55.0%
TCGACGAGGATGAACTCCGT+AGG + chr3_2:83385052-83385071 Msa0431300:intron 55.0%
GGTATTTCCCCTACTGGCAC+AGG + chr3_2:83385101-83385120 Msa0431300:intron 55.0%
GTTTCTGCCTGTGCCAGTAG+GGG - chr3_2:83385111-83385130 None:intergenic 55.0%
!! CTGTTTCTGCCTGTGCCAGT+AGG - chr3_2:83385113-83385132 None:intergenic 55.0%
CTACTGGCACAGGCAGAAAC+AGG + chr3_2:83385111-83385130 Msa0431300:intron 55.0%
CTCACCCCTAACTCGACTGT+TGG + chr3_2:83385882-83385901 Msa0431300:intron 55.0%
ACTCGGTTGAACTTCACCCC+TGG + chr3_2:83386492-83386511 Msa0431300:three_prime_UTR 55.0%
CGGAGACAATGGAAGACTCC+AGG - chr3_2:83386513-83386532 None:intergenic 55.0%
ATGGCATCTCCAGGTCCAGC+TGG + chr3_2:83381816-83381835 Msa0431300:CDS 60.0%
ATCTCCAGGTCCAGCTGGTG+AGG + chr3_2:83381821-83381840 Msa0431300:CDS 60.0%
!! GGAGTTTGGGGCTTTGGAGG+TGG + chr3_2:83382000-83382019 Msa0431300:CDS 60.0%
ATGGCATCTCCAGGTCCAGC+TGG + chr3_2:83381816-83381835 Msa0431300:CDS 60.0%
ATCTCCAGGTCCAGCTGGTG+AGG + chr3_2:83381821-83381840 Msa0431300:CDS 60.0%
!! GGAGTTTGGGGCTTTGGAGG+TGG + chr3_2:83382000-83382019 Msa0431300:CDS 60.0%
GGATCCTCACCAGCTGGACC+TGG - chr3_2:83381828-83381847 None:intergenic 65.0%
GGATCCTCACCAGCTGGACC+TGG - chr3_2:83381828-83381847 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 83381324 83386619 83381324 ID=Msa0431300;Name=Msa0431300
chr3_2 mRNA 83381324 83386619 83381324 ID=Msa0431300-mRNA-1;Parent=Msa0431300;Name=Msa0431300-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.6|0.5|1|1|1|6|383|1197
chr3_2 exon 83381324 83382730 83381324 ID=Msa0431300-mRNA-1:exon:23221;Parent=Msa0431300-mRNA-1
chr3_2 exon 83383312 83384694 83383312 ID=Msa0431300-mRNA-1:exon:23222;Parent=Msa0431300-mRNA-1
chr3_2 exon 83385123 83385167 83385123 ID=Msa0431300-mRNA-1:exon:23223;Parent=Msa0431300-mRNA-1
chr3_2 exon 83385265 83385558 83385265 ID=Msa0431300-mRNA-1:exon:23224;Parent=Msa0431300-mRNA-1
chr3_2 exon 83385632 83385834 83385632 ID=Msa0431300-mRNA-1:exon:23225;Parent=Msa0431300-mRNA-1
chr3_2 exon 83385975 83386619 83385975 ID=Msa0431300-mRNA-1:exon:23226;Parent=Msa0431300-mRNA-1
chr3_2 CDS 83381324 83382730 83381324 ID=Msa0431300-mRNA-1:cds;Parent=Msa0431300-mRNA-1
chr3_2 CDS 83383312 83384694 83383312 ID=Msa0431300-mRNA-1:cds;Parent=Msa0431300-mRNA-1
chr3_2 CDS 83385123 83385167 83385123 ID=Msa0431300-mRNA-1:cds;Parent=Msa0431300-mRNA-1
chr3_2 CDS 83385265 83385558 83385265 ID=Msa0431300-mRNA-1:cds;Parent=Msa0431300-mRNA-1
chr3_2 CDS 83385632 83385834 83385632 ID=Msa0431300-mRNA-1:cds;Parent=Msa0431300-mRNA-1
chr3_2 CDS 83385975 83386236 83385975 ID=Msa0431300-mRNA-1:cds;Parent=Msa0431300-mRNA-1
chr3_2 three_prime_UTR 83386237 83386619 83386237 ID=Msa0431300-mRNA-1:three_prime_utr;Parent=Msa0431300-mRNA-1
Gene Sequence

>Msa0431300

ATGGATGGTAATAATAATAATAAGCATCAAGGTGGTGAAGTGAGCATGATGGAGAAGAAAACAGAAGTGGTGGTGGCAATTTCAAATGTGGGTGGAGATAGCCATCACCATGGCCAAGATCATGATCATGAGTTGAAAGTAGTTGAATGTTCACCTCGTTACTCTACAAAGTCACCACCTTTAAACTGTGCTTCCCCTGAAATAAGGTTCATCCCTAGCCCAAATAAACCCCCAAAAGCTCCTGCTACAAATGAAAACCTTACCCCAAGAAAAACTCTTGTAAGATCAGTGTTCTCTAAGCCCAAATCAAGATTTGGTGAACAACCTTACCCTATTGATGGAATCCTTTTAGAAGAGAATGTTACTTCAAATTTGCAAGATCAATTAGCTGTTACTTCACCATATAAAGCACCACGTTCACCGAATAATAAACCCGGAACAGTTTATAGAACTGTTTCGATTACTTCTGTCGTCACTCCTAGAACACCTTTGATGGCATCTCCAGGTCCAGCTGGTGAGGATCCTGATGAAATCATATACAAGAAAGTTGAATTTAGTAAAGGCAAGCGTAAGAGACTAACGACTAAGGTTTTGATTGAGTTGTTTGTGTTTGTGTGCATCACGGGTAGCTTGTTGGCTAGTTTAACAGTTGAGGAACTAAAAAGGACGGAGATTTGGAGTTTGGGGCTTTGGAGGTGGTGTATGCTTGTGATGGTGACATTTTGTGGCATGTTAGTTACCAAATGGTTCACGCACATTGTCGTTTTCTTGATTGAAATGAACTTTTTGTTGAAGAAAAAGGTGCTTTATTTTGTCCATGGACTGAAGAAATGTATCCAGGTTTTCACTTGGATCGCTTTGGTTCTACTCACATGGGTGCTTTTAATCAATCGTGGAGTCGAACGATCTAAATTGGCCACGAAGATTTTGGATGGTGTAACATGGACTCTTGTTTCCCTTCTCATTGGAACATTTTTGTGGGTCATAAAGACATTGTTGCTAAAGATTTTGGCATCGAGTTTCCATGTCAAATCTTTCTTTGATCGAATTCAAGAATCAATCTTCCATCAATATGTTCTGCAGACTCTCTCTGGGCCTCCACTAATGGAAGAGGCTGAGAAAGTCGGCGGATCTCAAAGCACTTCCCATTTTAGTTTCAGGAGTACAACCAGTAAAGGTAGCACAAAGAAAGAGATTATTGATATGGCAAAGCTTCACAAGATGAAGCAAGAGAAAGTTTCTTCATGGACTATGAAGATTTTGGTAGATGCAGTGATGAACTCGAGGCTGTCCACAATCTCTAATTCTCTAGATGAAAGCTTTTATGATGTAGAAAATGAACAGAATGATAAAGAAATTACCAATGAGATGGAAGCAACTGCTGCTGCCTATTACGTTTTCAGGAATCATCAAGGTGGTGAAGTGAGCATGATGGAGAAGAAAACAGAAGTGGTGGTGGCAATTTCAAATGTGGGTGGAGATAGCCATCACCATGGCCAAGATCATGATCATGAGTTGAAAGTAGTTGAATGTTCACCTCGTTACTCTACAAAGTCACCACCTTTAAACTGTGCTTCCCCTGAAATAAGGTTCATCCCTAGCCCAAATAAACCCCCAAAAGCTCCTGCTACAAATGAAAACCTTACCCCAAGAAAAACTCTTGTAAGATCAGTGTTCTCTAAGCCCAAATCAAGATTTGGTGAACAACCTTACCCTATTGATGGAATCCTTTTAGAAGAGAATGTTACTTCAAATTTGCAAGATCAATTAGCTGTTACTTCACCATATAAAGCACCACGTTCACCGAATAATAAACCCGGAACAGTTTATAGAACTGTTTCGATTACTTCTGTCGTCACTCCTAGAACACCTTTGATGGCATCTCCAGGTCCAGCTGGTGAGGATCCTGATGAAATCATATACAAGAAAGTTGAATTTAGTAAAGGCAAGCGTAAGAGACTAACGACTAAGGTTTTGATTGAGTTGTTTGTGTTTGTGTGCATCACGGGTAGCTTGTTGGCTAGTTTAACAGTTGAGGAACTAAAAAGGACGGAGATTTGGAGTTTGGGGCTTTGGAGGTGGTGTATGCTTGTGATGGTGACATTTTGTGGCATGTTAGTTACCAAATGGTTCACGCACATTGTCGTTTTCTTGATTGAAATGAACTTTTTGTTGAAGAAAAAGGTGCTTTATTTTGTCCATGGACTGAAGAAATGTATCCAGGTTTTCACTTGGATCGCTTTGGTTCTACTCACATGGGTGCTTTTAATCAATCGTGGAGTCGAACGATCTAAATTGGCCACGAAGATTTTGGATGGTGTAACATGGACTCTTGTTTCCCTTCTCATTGGAACATTTTTGTGGGTCATAAAGACATTGTTGCTAAAGATTTTGGCATCGAGTTTCCATGTCAAATCTTTCTTTGATCGAATTCAAGAATCAATCTTCCATCAATATGTTCTGCAGACTCTCTCTGGGCCTCCACTAATGGAAGAGGCTGAGAAAGTCGGCGGATCTCAAAGCACTTCCCATTTTAGTTTCAGGAGTACAACCAGTAAAGGTAGCACAAAGAAAGAGGTTATTGATATGGCAAAGCTTCACAAGATGAAGCAAGAGAAAGTTTCTTCATGGACTATGAAGATTTTGGTAGATGCAGTGATGAACTCGAGGCTGTCCACAATCTCTAATTCTCTAGATGAAAGTTTTTATGATGTAGAAAATGAACAGAATGATAAAGAAATTACCAATGAGATGGAAGCAACTGCTGCTGCCTATTACGTTTTCAGGAATGCAGAAACAGGGCTGATTACCAGAAAATCTTTAGCAGCTTGGGTGTTGAAGGTATATCAAGAACGTAGAGCACTCGCGCACGCCTTAAGCGACACTAAAACAGCGGTTAAACAATTAAACAAGCTAGTTACAGGAGTCCTAGTAGTGGTGACCATAGTAGTGTGGCTTCTTCTAATGGAGATTGCAACTACAAAAGTTCTTGTATTCCTCTCATCGCAGCTAGTACTTGCGGCTTTCATGTTTGGAAACACGTGCAAGAATATATTTGAAGCCATCATCTTCGTGTTTGTAATGCATCCATTTGATGTTGGCGATCGATGTTTTATAGATGGTGTCGAGCTATTGGTTGAAGAAATGAATATACTGACAACAGTATTCTTGAAACTTAATAATGAAAAGGTGTATTATCCAAACTCTGTCCTAGCCATAAAACCGATCAGCAATTATTACAGAAGCCCTAATATGGGTGACAGTGTAGAGTTCTCAGTTGATTTTACGACGTCAGCAGAGAAAATCGGATCACTGAATGAAAAAATAAAGAGGTATTTGGAGAGGAATCCACAATACTGGCATCCTAGTTTCAGTTTGGCAGTGAAGGAGATTGAAAATGTAAATAAGATTAAGATGGGTCTTTATGTTACTCACACAATGAACTTTCAAGAATTTGGGGAGAAGACCAAGCGGAGAAGTGAATTAGTGATGGAAGTAAAGAAAATATTTGAAGAGCTCAATATCAGATACTACCTTATTCCGCAAGGTGTTCATCTCAGACACATGGAACCTGATTCAAGTTATCTTAAGTGA
Protein sequence

>Msa0431300

MDGNNNNKHQGGEVSMMEKKTEVVVAISNVGGDSHHHGQDHDHELKVVECSPRYSTKSPPLNCASPEIRFIPSPNKPPKAPATNENLTPRKTLVRSVFSKPKSRFGEQPYPIDGILLEENVTSNLQDQLAVTSPYKAPRSPNNKPGTVYRTVSITSVVTPRTPLMASPGPAGEDPDEIIYKKVEFSKGKRKRLTTKVLIELFVFVCITGSLLASLTVEELKRTEIWSLGLWRWCMLVMVTFCGMLVTKWFTHIVVFLIEMNFLLKKKVLYFVHGLKKCIQVFTWIALVLLTWVLLINRGVERSKLATKILDGVTWTLVSLLIGTFLWVIKTLLLKILASSFHVKSFFDRIQESIFHQYVLQTLSGPPLMEEAEKVGGSQSTSHFSFRSTTSKGSTKKEIIDMAKLHKMKQEKVSSWTMKILVDAVMNSRLSTISNSLDESFYDVENEQNDKEITNEMEATAAAYYVFRNHQGGEVSMMEKKTEVVVAISNVGGDSHHHGQDHDHELKVVECSPRYSTKSPPLNCASPEIRFIPSPNKPPKAPATNENLTPRKTLVRSVFSKPKSRFGEQPYPIDGILLEENVTSNLQDQLAVTSPYKAPRSPNNKPGTVYRTVSITSVVTPRTPLMASPGPAGEDPDEIIYKKVEFSKGKRKRLTTKVLIELFVFVCITGSLLASLTVEELKRTEIWSLGLWRWCMLVMVTFCGMLVTKWFTHIVVFLIEMNFLLKKKVLYFVHGLKKCIQVFTWIALVLLTWVLLINRGVERSKLATKILDGVTWTLVSLLIGTFLWVIKTLLLKILASSFHVKSFFDRIQESIFHQYVLQTLSGPPLMEEAEKVGGSQSTSHFSFRSTTSKGSTKKEVIDMAKLHKMKQEKVSSWTMKILVDAVMNSRLSTISNSLDESFYDVENEQNDKEITNEMEATAAAYYVFRNAETGLITRKSLAAWVLKVYQERRALAHALSDTKTAVKQLNKLVTGVLVVVTIVVWLLLMEIATTKVLVFLSSQLVLAAFMFGNTCKNIFEAIIFVFVMHPFDVGDRCFIDGVELLVEEMNILTTVFLKLNNEKVYYPNSVLAIKPISNYYRSPNMGDSVEFSVDFTTSAEKIGSLNEKIKRYLERNPQYWHPSFSLAVKEIENVNKIKMGLYVTHTMNFQEFGEKTKRRSELVMEVKKIFEELNIRYYLIPQGVHLRHMEPDSSYLK*