AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0290800


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0290800 MtrunA17_Chr2g0310421 95.227 419 6 3 1 406 1 418 0.0 798
Msa0290800 MtrunA17_Chr6g0458861 69.940 336 87 3 82 403 2 337 5.83e-166 468
Msa0290800 MtrunA17_Chr4g0057861 67.771 332 93 3 83 400 5 336 9.12e-159 450
Msa0290800 MtrunA17_Chr3g0122971 66.766 337 79 3 79 402 2 318 1.58e-157 446
Msa0290800 MtrunA17_Chr8g0357071 63.241 253 79 2 158 399 59 308 1.36e-100 301
Msa0290800 MtrunA17_Chr3g0144151 48.503 334 153 8 80 395 82 414 2.07e-82 259
Msa0290800 MtrunA17_Chr7g0252641 46.951 328 158 6 83 395 69 395 1.54e-76 243
Msa0290800 MtrunA17_Chr8g0360951 71.942 139 31 1 251 389 1 131 8.24e-62 196
Msa0290800 MtrunA17_Chr2g0316821 75.510 49 12 0 291 339 7 55 8.75e-18 77.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0290800 AT1G79530.1 77.069 423 79 5 1 406 1 422 0.0 629
Msa0290800 AT1G16300.1 75.176 427 74 6 1 404 1 418 0.0 618
Msa0290800 AT1G13440.1 68.675 332 90 3 83 400 5 336 4.02e-163 462
Msa0290800 AT3G04120.1 68.373 332 91 3 83 400 5 336 1.29e-162 460
Msa0290800 AT1G13440.2 62.651 332 82 4 83 400 5 308 2.83e-140 402
Msa0290800 AT1G42970.1 46.418 349 165 9 65 395 66 410 1.44e-86 270
Msa0290800 AT1G12900.3 48.171 328 154 6 83 395 15 341 2.04e-80 251
Msa0290800 AT1G12900.4 48.171 328 154 6 83 395 15 341 2.04e-80 251
Msa0290800 AT1G12900.1 48.171 328 154 6 83 395 64 390 3.99e-80 252
Msa0290800 AT1G12900.5 47.734 331 157 6 80 395 103 432 5.69e-80 253
Msa0290800 AT3G26650.1 46.951 328 158 6 83 395 61 387 6.78e-78 246
Msa0290800 AT1G12900.2 48.750 240 113 3 165 395 70 308 2.26e-55 186

Find 139 sgRNAs with CRISPR-Local

Find 447 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTACTGTGTTCTCAATTT+TGG 0.050097 2_3:-38679159 None:intergenic
TTGAACTTGGAATTATATTT+TGG 0.111185 2_3:-38677966 None:intergenic
TTCTTCCTCCGATCGCTTTC+AGG 0.138089 2_3:+38673236 Msa0290800:CDS
CTGCTTAGGTTCTCAGATTT+TGG 0.157529 2_3:+38679240 Msa0290800:three_prime_UTR
CCCGGAGCATGCAGCCTATC+AGG 0.185098 2_3:+38674700 Msa0290800:CDS
CAAGGGAACTATTAAGGTTT+TGG 0.236598 2_3:+38676586 Msa0290800:CDS
GAGATCCCTTGGGGTGATTT+TGG 0.243709 2_3:+38676807 Msa0290800:CDS
AGGTTGCAAAACAACATATT+TGG 0.249949 2_3:+38674524 Msa0290800:CDS
ACCATTCAAGGGAACTATTA+AGG 0.249959 2_3:+38676580 Msa0290800:CDS
TATAAGATTGCAGACATATC+TGG 0.257462 2_3:+38679280 Msa0290800:three_prime_UTR
CCCTGATAGGCTGCATGCTC+CGG 0.276787 2_3:-38674701 None:intergenic
TTTCTCAGCGGAGCTTCTTA+TGG 0.312132 2_3:-38673051 None:intergenic
CATTGTCCTGGTTACATGTT+TGG 0.322147 2_3:+38679368 Msa0290800:three_prime_UTR
TTCATAGTTGTTGTTGTTGT+TGG 0.333825 2_3:+38673113 Msa0290800:five_prime_UTR
GGACAATTGAAGGGAATTCT+TGG 0.359064 2_3:+38678347 Msa0290800:CDS
GTTAAAATTAGTGGCTGCTT+AGG 0.363077 2_3:+38679226 Msa0290800:three_prime_UTR
AAAGTCCTTCCTGAACTAAA+TGG 0.364181 2_3:+38678094 Msa0290800:CDS
AAAACCAGAGAACACATTCT+AGG 0.370927 2_3:+38673144 Msa0290800:five_prime_UTR
ATATATTTAGCATCAATAAA+AGG 0.371726 2_3:-38675630 None:intergenic
ATGAGTTAGGTTAAAATTAG+TGG 0.375145 2_3:+38679217 Msa0290800:three_prime_UTR
GCATTGAGAATATAATAAAA+AGG 0.377456 2_3:+38679344 Msa0290800:three_prime_UTR
TCATCTATTTCTTCCTCTGT+TGG 0.390292 2_3:-38679310 None:intergenic
TGTAGGGCACATGGCATTGG+TGG 0.391459 2_3:+38679132 Msa0290800:CDS
TGCTGCTTTGACATCTTCAT+AGG 0.396446 2_3:-38678200 None:intergenic
ATCTCTTACCTTTGCAGCAC+CGG 0.404038 2_3:-38677989 None:intergenic
GACTATGTCATTGAGTCTTC+AGG 0.404219 2_3:+38676834 Msa0290800:CDS
TTCTGATATTTCCATGAGTT+AGG 0.404414 2_3:+38679204 Msa0290800:three_prime_UTR
CTATTTCTTCCTCTGTTGGA+GGG 0.407388 2_3:-38679306 None:intergenic
TGTTCAGACTCAAGCAGCAC+TGG 0.408024 2_3:+38674838 Msa0290800:intron
TGCTTCAGAGGGACAATTGA+AGG 0.410485 2_3:+38678337 Msa0290800:CDS
CCTCTCCAATCCTTCATTGA+AGG 0.411005 2_3:-38677928 None:intergenic
AGGGCACATGGCATTGGTGG+GGG 0.418998 2_3:+38679135 Msa0290800:CDS
ATGACTTCGTTGGTGATTCA+AGG 0.419617 2_3:+38678396 Msa0290800:CDS
TTTGATGCTAAGGCAGGGAT+TGG 0.422198 2_3:+38678762 Msa0290800:CDS
TCCGTTGCTGTAGCCCTGAT+AGG 0.423013 2_3:-38674714 None:intergenic
TTTGCAGCACCGGTTGAACT+TGG 0.432818 2_3:-38677979 None:intergenic
GACACTACTTTGGAAATCAA+TGG 0.432926 2_3:+38676611 Msa0290800:CDS
TGCTGATGCACCTATGTTTG+TGG 0.433580 2_3:+38677043 Msa0290800:CDS
GAGGAGTTTGGTATCGTTGA+AGG 0.436763 2_3:+38677737 Msa0290800:CDS
ACCTTAATAGTTCCCTTGAA+TGG 0.439866 2_3:-38676581 None:intergenic
CCTGATAGGCTGCATGCTCC+GGG 0.440170 2_3:-38674700 None:intergenic
TCTATTTCTTCCTCTGTTGG+AGG 0.442263 2_3:-38679307 None:intergenic
AATATAATTCCAAGTTCAAC+CGG 0.443199 2_3:+38677970 Msa0290800:CDS
CAGGTGGTTCACGAGGAGTT+TGG 0.447918 2_3:+38677725 Msa0290800:intron
TTCTCAGAAACTGCAATGCC+CGG 0.448790 2_3:+38674682 Msa0290800:intron
GAGATCCCGTGGAGATCCCT+TGG 0.453288 2_3:+38676796 Msa0290800:intron
GCTCCTTTCACCTTCTCCAA+TGG 0.454079 2_3:+38673173 Msa0290800:exon
AGATCCCGTGGAGATCCCTT+GGG 0.459773 2_3:+38676797 Msa0290800:CDS
GAAAGCGTCATCGCATTTGA+AGG 0.460358 2_3:+38676875 Msa0290800:CDS
TAGCAAGTCTTTCGTGAAGC+TGG 0.466758 2_3:+38678788 Msa0290800:CDS
GTGATTCAGGTGCTTGGCAA+TGG 0.469384 2_3:+38674476 Msa0290800:intron
TTCCACTCATGGACCATTCA+AGG 0.469698 2_3:+38676568 Msa0290800:CDS
AAGACAAGGGTTGGAATTAA+CGG 0.470607 2_3:+38674862 Msa0290800:CDS
CCTTGTAGGGCACATGGCAT+TGG 0.471246 2_3:+38679129 Msa0290800:CDS
GTAGGGCACATGGCATTGGT+GGG 0.474551 2_3:+38679133 Msa0290800:CDS
AGGTTAAAGTTGTGAGCAAA+AGG 0.476874 2_3:+38676639 Msa0290800:CDS
GTTTCTGTGATTCAGGTGCT+TGG 0.477598 2_3:+38674470 Msa0290800:intron
GCAACACAAAAGACTGTAGA+TGG 0.480151 2_3:+38677904 Msa0290800:intron
GTATTATACTGACTTTGTAC+AGG 0.481565 2_3:-38674747 None:intergenic
TATTTCTTCCTCTGTTGGAG+GGG 0.488605 2_3:-38679305 None:intergenic
TTGATGCTAAGGCAGGGATT+GGG 0.489330 2_3:+38678763 Msa0290800:CDS
GAACCCTAGAATGTGTTCTC+TGG 0.490183 2_3:-38673148 None:intergenic
TTTGGAAATCAATGGGAAGC+AGG 0.492012 2_3:+38676619 Msa0290800:CDS
ACAACCGTGCATGCAACAAC+AGG 0.493342 2_3:+38677767 Msa0290800:CDS
ACACTACTTTGGAAATCAAT+GGG 0.498572 2_3:+38676612 Msa0290800:CDS
TAGGGCACATGGCATTGGTG+GGG 0.502489 2_3:+38679134 Msa0290800:CDS
GTCGAGTATCTTTGATGCTA+AGG 0.502777 2_3:+38678752 Msa0290800:CDS
ATGGTCCTTCAATGAAGGAT+TGG 0.505338 2_3:+38677923 Msa0290800:CDS
ACCGAGTGTTGGACCTTGTA+GGG 0.506658 2_3:+38679116 Msa0290800:CDS
AGTATCTTTGATGCTAAGGC+AGG 0.509425 2_3:+38678756 Msa0290800:CDS
TTCAAGTATGATTCCACTCA+TGG 0.511189 2_3:+38676557 Msa0290800:intron
AGAAGAGAAGAAGCGGCCAT+TGG 0.511286 2_3:-38673189 None:intergenic
GAACTAAATGGAAAACTCAC+TGG 0.516497 2_3:+38678106 Msa0290800:CDS
AAACCAGAGAACACATTCTA+GGG 0.522408 2_3:+38673145 Msa0290800:five_prime_UTR
AAAATGAAGGCTTGCTTCAG+AGG 0.524629 2_3:+38678325 Msa0290800:intron
TGCTTTGACATCTTCATAGG+AGG 0.524744 2_3:-38678197 None:intergenic
TTGTCTTGCACCTCTTGCCA+AGG 0.529996 2_3:+38677133 Msa0290800:CDS
AACTATGAATTGAAAGAATG+AGG 0.530014 2_3:-38673099 None:intergenic
CCGGAGCATGCAGCCTATCA+GGG 0.530103 2_3:+38674701 Msa0290800:CDS
GAAGAAGCGGCCATTGGAGA+AGG 0.532216 2_3:-38673183 None:intergenic
TACTGACTTTGTACAGGGAG+AGG 0.536453 2_3:-38674741 None:intergenic
AAGTTCAACCGGTGCTGCAA+AGG 0.540468 2_3:+38677981 Msa0290800:CDS
CCAATGCCATGTGCCCTACA+AGG 0.542207 2_3:-38679129 None:intergenic
CAAGCAGCACTGGGAAGACA+AGG 0.543034 2_3:+38674848 Msa0290800:CDS
CTGTCGTGGACTTAACCTGC+CGG 0.543870 2_3:+38678161 Msa0290800:CDS
CGGCCATTGGAGAAGGTGAA+AGG 0.548721 2_3:-38673176 None:intergenic
GCCTATCAGGGCTACAGCAA+CGG 0.549007 2_3:+38674713 Msa0290800:CDS
TGTAGATGGTCCTTCAATGA+AGG 0.550798 2_3:+38677918 Msa0290800:CDS
TTTGTGAAATCCCAGGCTGT+TGG 0.556767 2_3:+38678070 Msa0290800:intron
CCATTGCAGCAACCGAGTGT+TGG 0.556820 2_3:+38679105 Msa0290800:intron
GAGACCTGTTGTTGCATGCA+CGG 0.556909 2_3:-38677771 None:intergenic
AAATGGAAAACTCACTGGAA+TGG 0.557070 2_3:+38678111 Msa0290800:CDS
TGAAAGCGATCGGAGGAAGA+AGG 0.558306 2_3:-38673234 None:intergenic
AACCGAGTGTTGGACCTTGT+AGG 0.560181 2_3:+38679115 Msa0290800:CDS
TTCAATGAAGGATTGGAGAG+GGG 0.560183 2_3:+38677930 Msa0290800:CDS
GTTCAGACTCAAGCAGCACT+GGG 0.562033 2_3:+38674839 Msa0290800:intron
ACTGACTTTGTACAGGGAGA+GGG 0.564116 2_3:-38674740 None:intergenic
TCCACTCATGGACCATTCAA+GGG 0.568117 2_3:+38676569 Msa0290800:CDS
ACAGTAGTGTCTCTTACTGT+TGG 0.570601 2_3:+38679173 Msa0290800:three_prime_UTR
AGCACTGGGAAGACAAGGGT+TGG 0.575636 2_3:+38674853 Msa0290800:CDS
TACTGCTAATGTTTCTGTCG+TGG 0.577340 2_3:+38678147 Msa0290800:CDS
GCCCTACAAGGTCCAACACT+CGG 0.580688 2_3:-38679117 None:intergenic
ATTAGAAACAATGTCCATGT+TGG 0.582074 2_3:-38677093 None:intergenic
TCAATGAAGGATTGGAGAGG+GGG 0.582137 2_3:+38677931 Msa0290800:CDS
AGAAGAGACCTGAAAGCGAT+CGG 0.585154 2_3:-38673244 None:intergenic
AACATAGGTGCATCAGCAGA+TGG 0.588893 2_3:-38677038 None:intergenic
ATCTGGAACCCCTCCAACAG+AGG 0.589131 2_3:+38679297 Msa0290800:three_prime_UTR
TCCCTTGAATGGTCCATGAG+TGG 0.590101 2_3:-38676570 None:intergenic
AAATGAAGGCTTGCTTCAGA+GGG 0.591059 2_3:+38678326 Msa0290800:intron
TCACCCCAAGGGATCTCCAC+GGG 0.591324 2_3:-38676801 None:intergenic
TTCTGTACTCAGAGATCCCG+TGG 0.592329 2_3:+38676785 Msa0290800:intron
TGTTACGTGTAGCTACTTCG+CGG 0.593467 2_3:+38675577 Msa0290800:CDS
CTTCAATGAAGGATTGGAGA+GGG 0.602730 2_3:+38677929 Msa0290800:CDS
TGCAAACGAACCTTGGCAAG+AGG 0.603999 2_3:-38677143 None:intergenic
AGATCTGAGAAGAGAAGAAG+CGG 0.606427 2_3:-38673196 None:intergenic
TATTATACTGACTTTGTACA+GGG 0.606576 2_3:-38674746 None:intergenic
GCTTCAGAGGGACAATTGAA+GGG 0.606877 2_3:+38678338 Msa0290800:CDS
GATGCACCTATGTTTGTGGT+AGG 0.612197 2_3:+38677047 Msa0290800:CDS
GTATCTTTGATGCTAAGGCA+GGG 0.617944 2_3:+38678757 Msa0290800:CDS
TATTCGTCAGGTGGTTCACG+AGG 0.618264 2_3:+38677718 Msa0290800:intron
CTAATTCCAAACATGTAACC+AGG 0.619165 2_3:-38679374 None:intergenic
CTTTCGTGAAGCTGGTCTCG+TGG 0.621248 2_3:+38678796 Msa0290800:CDS
TTCACTCCTACCACAAACAT+AGG 0.625799 2_3:-38677053 None:intergenic
GTTGGACCTTGTAGGGCACA+TGG 0.628754 2_3:+38679123 Msa0290800:CDS
GTTGTCTCTAATGACTTCGT+TGG 0.630337 2_3:+38678386 Msa0290800:CDS
GTTACGTGTAGCTACTTCGC+GGG 0.635493 2_3:+38675578 Msa0290800:CDS
ATCACCCCAAGGGATCTCCA+CGG 0.651353 2_3:-38676802 None:intergenic
TCAGCACCAAAATCACCCCA+AGG 0.653762 2_3:-38676813 None:intergenic
ACGACAGAAACATTAGCAGT+AGG 0.663380 2_3:-38678145 None:intergenic
GGAAGAAGGTGAAGAAACGA+TGG 0.669878 2_3:-38673220 None:intergenic
GATCCCGTGGAGATCCCTTG+GGG 0.669963 2_3:+38676798 Msa0290800:CDS
AGAGACCTGAAAGCGATCGG+AGG 0.670276 2_3:-38673241 None:intergenic
TGTAAGACTAATGAATCACA+TGG 0.671569 2_3:-38674557 None:intergenic
GAAGACATACAACTCCAACA+TGG 0.678082 2_3:+38677079 Msa0290800:CDS
CCTTCAATGAAGGATTGGAG+AGG 0.679341 2_3:+38677928 Msa0290800:CDS
AATTCTTGGATACACAGATG+AGG 0.683849 2_3:+38678361 Msa0290800:CDS
CAGCACCAAAATCACCCCAA+GGG 0.691447 2_3:-38676812 None:intergenic
AAGCAGCACTGGGAAGACAA+GGG 0.707230 2_3:+38674849 Msa0290800:CDS
GTATTAGTTCAAAGTCTACG+AGG 0.774170 2_3:+38674504 Msa0290800:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTAAAACCATTTTTTA+TGG + chr2_3:38674278-38674297 Msa0290800:intron 10.0%
!!! TTTTTAAAACCATTTTTTAT+GGG + chr2_3:38674279-38674298 Msa0290800:intron 10.0%
!! GAATATGATAAAATATTATA+TGG - chr2_3:38675021-38675040 None:intergenic 10.0%
!! AAAATATAACATGAAATATT+AGG - chr2_3:38675372-38675391 None:intergenic 10.0%
!!! TTTCATGTTATATTTTAATT+TGG + chr2_3:38675376-38675395 Msa0290800:intron 10.0%
!! AAACTAAAATATTAACATAA+CGG - chr2_3:38675790-38675809 None:intergenic 10.0%
!! ATCATATACATTTATTAAAT+TGG + chr2_3:38678039-38678058 Msa0290800:intron 10.0%
!! TGTTATATGAAATTAAGTTA+AGG + chr2_3:38673463-38673482 Msa0290800:intron 15.0%
!! GTTATATGAAATTAAGTTAA+GGG + chr2_3:38673464-38673483 Msa0290800:intron 15.0%
!!! AAATGATTGTATTTGTTTTT+AGG + chr2_3:38673772-38673791 Msa0290800:intron 15.0%
!!! TAAAAATGACAAAAAAGTTT+TGG + chr2_3:38674197-38674216 Msa0290800:intron 15.0%
!! TTTCTTAGTTTATAAGTATT+TGG - chr2_3:38674980-38674999 None:intergenic 15.0%
!! AAGATATTTCTTTATATTTC+TGG + chr2_3:38675125-38675144 Msa0290800:intron 15.0%
!! AGATATTTCTTTATATTTCT+GGG + chr2_3:38675126-38675145 Msa0290800:intron 15.0%
!! ATATATTTAGCATCAATAAA+AGG - chr2_3:38675633-38675652 None:intergenic 15.0%
!!! TTTTATTGATGCTAAATATA+TGG + chr2_3:38675632-38675651 Msa0290800:CDS 15.0%
!! TATGAAAATACATAAAAACA+TGG - chr2_3:38675704-38675723 None:intergenic 15.0%
!! AACTAAAATATTAACATAAC+GGG - chr2_3:38675789-38675808 None:intergenic 15.0%
!!! TATTCTTTTTATTTCAGTTA+TGG + chr2_3:38676232-38676251 Msa0290800:intron 15.0%
!! TATGTACAAAAACAATAAAA+GGG - chr2_3:38676493-38676512 None:intergenic 15.0%
!! ATACATTTATTAAATTGGTT+TGG + chr2_3:38678044-38678063 Msa0290800:intron 15.0%
!! AAAGAGTTACATTTAAATTA+AGG - chr2_3:38678725-38678744 None:intergenic 15.0%
!! TTTGTATTACAGTAAAATAA+GGG - chr2_3:38678985-38679004 None:intergenic 15.0%
!! ATTTGTATTACAGTAAAATA+AGG - chr2_3:38678986-38679005 None:intergenic 15.0%
!!! AAATCTATATTTTGTCTTTG+AGG + chr2_3:38673599-38673618 Msa0290800:intron 20.0%
!!! ATTGTATTTGTTTTTAGGTT+CGG + chr2_3:38673777-38673796 Msa0290800:intron 20.0%
!! TCTCAATTATAAGCAAAAAT+TGG + chr2_3:38673827-38673846 Msa0290800:intron 20.0%
!!! AAAAATTGGTTTAAGAAAGT+TGG + chr2_3:38673841-38673860 Msa0290800:intron 20.0%
!! TCTCAAATATAAGCAAAAAT+TGG - chr2_3:38673894-38673913 None:intergenic 20.0%
!! TACACTACAATAAAAAAAAG+GGG - chr2_3:38674078-38674097 None:intergenic 20.0%
!! CTACACTACAATAAAAAAAA+GGG - chr2_3:38674079-38674098 None:intergenic 20.0%
!! ACTACACTACAATAAAAAAA+AGG - chr2_3:38674080-38674099 None:intergenic 20.0%
!!! TTGTAGTCATTTTAAACAAA+TGG + chr2_3:38675321-38675340 Msa0290800:intron 20.0%
!!! TGTAGTCATTTTAAACAAAT+GGG + chr2_3:38675322-38675341 Msa0290800:intron 20.0%
!! TTACATAACTACATTATGAA+TGG - chr2_3:38675447-38675466 None:intergenic 20.0%
!!! TGGAAAATTGAGTTTTTTAA+AGG - chr2_3:38676035-38676054 None:intergenic 20.0%
!!! ATCTTTGCTATGATTTTTAT+CGG + chr2_3:38676054-38676073 Msa0290800:intron 20.0%
!!! TCTAAAACATGAAAAGAAAT+TGG + chr2_3:38676150-38676169 Msa0290800:intron 20.0%
!! AGAGTAGAAAAAAATTAAAG+AGG - chr2_3:38676279-38676298 None:intergenic 20.0%
!! GTATGTACAAAAACAATAAA+AGG - chr2_3:38676494-38676513 None:intergenic 20.0%
!!! TAGAAAATTCTTATTGCTTT+TGG + chr2_3:38677223-38677242 Msa0290800:intron 20.0%
!!! AGAAAATTCTTATTGCTTTT+GGG + chr2_3:38677224-38677243 Msa0290800:intron 20.0%
!! ATGAATTTCATGATCTTATT+AGG - chr2_3:38677434-38677453 None:intergenic 20.0%
!! AATAAGATCATGAAATTCAT+AGG + chr2_3:38677434-38677453 Msa0290800:intron 20.0%
!!! TGAACTTGGAATTATATTTT+GGG - chr2_3:38677968-38677987 None:intergenic 20.0%
!!! TTGAACTTGGAATTATATTT+TGG - chr2_3:38677969-38677988 None:intergenic 20.0%
!! ATTTCATGATACAAATGATT+TGG + chr2_3:38678526-38678545 Msa0290800:intron 20.0%
!! TTTCATGATACAAATGATTT+GGG + chr2_3:38678527-38678546 Msa0290800:intron 20.0%
!! ACTCAAACTAATAAGATTAT+AGG - chr2_3:38678660-38678679 None:intergenic 20.0%
!!! TTTAAATTAAGGTGTTCATT+TGG - chr2_3:38678714-38678733 None:intergenic 20.0%
!! GCATTGAGAATATAATAAAA+AGG + chr2_3:38679344-38679363 Msa0290800:three_prime_UTR 20.0%
! AACTATGAATTGAAAGAATG+AGG - chr2_3:38673102-38673121 None:intergenic 25.0%
! TTCTCTATTACGATTATTTG+TGG + chr2_3:38673338-38673357 Msa0290800:intron 25.0%
!! TCGAAATTTAAGCTTACTTT+TGG + chr2_3:38673567-38673586 Msa0290800:intron 25.0%
!!! TTTAAGCTTACTTTTGGATT+TGG + chr2_3:38673573-38673592 Msa0290800:intron 25.0%
! TTGAGGAAGTGAAAATTTAT+TGG + chr2_3:38673616-38673635 Msa0290800:intron 25.0%
!! AACATTGCAATATTTTCCTT+TGG + chr2_3:38673675-38673694 Msa0290800:intron 25.0%
! TAAACTATATTTCAAGCCAA+AGG - chr2_3:38673694-38673713 None:intergenic 25.0%
!!! TTTTTAGGTTCGGAAAATAT+AGG + chr2_3:38673787-38673806 Msa0290800:intron 25.0%
! TGTAGTGTTAGTTAAAAAAC+AGG + chr2_3:38673970-38673989 Msa0290800:intron 25.0%
! GTAGTGTTAGTTAAAAAACA+GGG + chr2_3:38673971-38673990 Msa0290800:intron 25.0%
! TACAATAGGAACTTCTATAT+TGG - chr2_3:38674156-38674175 None:intergenic 25.0%
! AATATAGAAGTTCCTATTGT+AGG + chr2_3:38674155-38674174 Msa0290800:intron 25.0%
! ATATAGAAGTTCCTATTGTA+GGG + chr2_3:38674156-38674175 Msa0290800:intron 25.0%
!!! AAAAGTTTTGGAGACTAAAA+TGG + chr2_3:38674209-38674228 Msa0290800:intron 25.0%
!!! AAAGTTTTGGAGACTAAAAT+GGG + chr2_3:38674210-38674229 Msa0290800:intron 25.0%
! ATTTAACATGCATAAAAGTC+AGG - chr2_3:38674435-38674454 None:intergenic 25.0%
! ACAATTGAAACAACAAAAAC+CGG - chr2_3:38674635-38674654 None:intergenic 25.0%
!!! TATTATACTGACTTTGTACA+GGG - chr2_3:38674749-38674768 None:intergenic 25.0%
!!! ACAATTATTTTGCGTGTATT+TGG + chr2_3:38674768-38674787 Msa0290800:intron 25.0%
!!! CAATTATTTTGCGTGTATTT+GGG + chr2_3:38674769-38674788 Msa0290800:intron 25.0%
! ATCATATTCCTGTTTCATTT+AGG + chr2_3:38675032-38675051 Msa0290800:intron 25.0%
! ATGACTACAATTAAAAGATG+TGG - chr2_3:38675311-38675330 None:intergenic 25.0%
!!! AACTTTTAAGGATATATTCC+AGG - chr2_3:38675491-38675510 None:intergenic 25.0%
! GATAAAAATCATAGCAAAGA+TGG - chr2_3:38676055-38676074 None:intergenic 25.0%
!!! TCTTTGCTATGATTTTTATC+GGG + chr2_3:38676055-38676074 Msa0290800:intron 25.0%
!!! TTTTAGAATATCTATCCTCA+TGG - chr2_3:38676137-38676156 None:intergenic 25.0%
!!! TTTTTATTTCAGTTATGGTC+AGG + chr2_3:38676237-38676256 Msa0290800:intron 25.0%
!!! TTGTTGTTTTTGTACATAGA+GGG + chr2_3:38676298-38676317 Msa0290800:intron 25.0%
! AAGCTCAAATTAAGATTTGA+AGG - chr2_3:38676969-38676988 None:intergenic 25.0%
!!! GAAAATTCTTATTGCTTTTG+GGG + chr2_3:38677225-38677244 Msa0290800:intron 25.0%
! CAGAGAAAAATGTATATTTC+AGG - chr2_3:38677300-38677319 None:intergenic 25.0%
! GATCAATTATTCTTTCCTTA+AGG + chr2_3:38677351-38677370 Msa0290800:intron 25.0%
!!! TATCCTGGAATTGATTTTTT+TGG + chr2_3:38677377-38677396 Msa0290800:intron 25.0%
!!! ATCCTGGAATTGATTTTTTT+GGG + chr2_3:38677378-38677397 Msa0290800:intron 25.0%
!!! AATTGATTTTTTTGGGGATA+GGG + chr2_3:38677385-38677404 Msa0290800:intron 25.0%
! GTAATATCTCTTTCAATACA+AGG + chr2_3:38677484-38677503 Msa0290800:intron 25.0%
! ATTGATAGAAGTGAACTTTA+TGG + chr2_3:38677516-38677535 Msa0290800:intron 25.0%
! GATCTATCTGAATCAATATA+AGG + chr2_3:38677549-38677568 Msa0290800:intron 25.0%
! ACTTGAAACATGTAAAGTAA+TGG - chr2_3:38677848-38677867 None:intergenic 25.0%
! AAGACAATAGATGTTAACAA+TGG - chr2_3:38677872-38677891 None:intergenic 25.0%
! AATATAATTCCAAGTTCAAC+CGG + chr2_3:38677970-38677989 Msa0290800:CDS 25.0%
! AATAATAGAAAACAACCGAA+GGG - chr2_3:38678292-38678311 None:intergenic 25.0%
! AAATAATAGAAAACAACCGA+AGG - chr2_3:38678293-38678312 None:intergenic 25.0%
! TAGCATGTATACTTGATAAA+AGG - chr2_3:38678488-38678507 None:intergenic 25.0%
!!! TTGGGTTATATTACTTTTGT+TGG + chr2_3:38678545-38678564 Msa0290800:intron 25.0%
!!! AAAACAAAGGTCTTGTTTTA+TGG - chr2_3:38678627-38678646 None:intergenic 25.0%
! TTGAGTTTGTATTATTGTCT+TGG + chr2_3:38678674-38678693 Msa0290800:intron 25.0%
! TGAGTTTGTATTATTGTCTT+GGG + chr2_3:38678675-38678694 Msa0290800:intron 25.0%
!! TAAATGTAACTCTTTTGAAC+AGG + chr2_3:38678730-38678749 Msa0290800:intron 25.0%
! CAGTAAAATAAGGGAAAATT+TGG - chr2_3:38678976-38678995 None:intergenic 25.0%
!!! ACTAATTTTAACCTAACTCA+TGG - chr2_3:38679218-38679237 None:intergenic 25.0%
! ATGAGTTAGGTTAAAATTAG+TGG + chr2_3:38679217-38679236 Msa0290800:three_prime_UTR 25.0%
!!! TAAACACTCTTTTTTCTCAG+CGG - chr2_3:38673066-38673085 None:intergenic 30.0%
! TTCATAGTTGTTGTTGTTGT+TGG + chr2_3:38673113-38673132 Msa0290800:five_prime_UTR 30.0%
ATGCGAAAAATACACATTTC+AGG - chr2_3:38673720-38673739 None:intergenic 30.0%
GTTAGTTAAAAAACAGGGTA+AGG + chr2_3:38673976-38673995 Msa0290800:intron 30.0%
TTGCATACAATACACCAAAA+TGG + chr2_3:38673999-38674018 Msa0290800:intron 30.0%
ATACAATACACCAAAATGGT+GGG + chr2_3:38674003-38674022 Msa0290800:intron 30.0%
TATAGAAGTTCCTATTGTAG+GGG + chr2_3:38674157-38674176 Msa0290800:intron 30.0%
TTTGCTTATCATTTCATAGC+TGG + chr2_3:38674401-38674420 Msa0290800:intron 30.0%
AGGTTGCAAAACAACATATT+TGG + chr2_3:38674524-38674543 Msa0290800:CDS 30.0%
TGTAAGACTAATGAATCACA+TGG - chr2_3:38674560-38674579 None:intergenic 30.0%
!! GAGCACTGATTAAAATTGTT+GGG - chr2_3:38674594-38674613 None:intergenic 30.0%
!! AGAGCACTGATTAAAATTGT+TGG - chr2_3:38674595-38674614 None:intergenic 30.0%
!! GTATTATACTGACTTTGTAC+AGG - chr2_3:38674750-38674769 None:intergenic 30.0%
!! TATTGATTCTTACCTGTTGT+TGG + chr2_3:38674808-38674827 Msa0290800:intron 30.0%
AGAGAAATCTCATAACAAGA+AGG - chr2_3:38674891-38674910 None:intergenic 30.0%
ATAAGTATTTGGCACGAAAT+TGG - chr2_3:38674969-38674988 None:intergenic 30.0%
CATTACATCCTAAATGAAAC+AGG - chr2_3:38675043-38675062 None:intergenic 30.0%
!! TCCTTTTTAGAAGATTTGCA+TGG + chr2_3:38675267-38675286 Msa0290800:intron 30.0%
! ACCATGCAAATCTTCTAAAA+AGG - chr2_3:38675271-38675290 None:intergenic 30.0%
! ACGCAAGCTTAAAACTTTTA+AGG - chr2_3:38675503-38675522 None:intergenic 30.0%
!!! CACATTTTTTTTCAATGTGC+AGG + chr2_3:38675531-38675550 Msa0290800:intron 30.0%
!!! TTTTTTCAATGTGCAGGTTT+TGG + chr2_3:38675537-38675556 Msa0290800:intron 30.0%
TATTTAGACATGTTGGCAAT+AGG + chr2_3:38675840-38675859 Msa0290800:intron 30.0%
ACAACTGTAGAAAAGGTAAA+AGG - chr2_3:38675950-38675969 None:intergenic 30.0%
CAATTGTACAACTGTAGAAA+AGG - chr2_3:38675957-38675976 None:intergenic 30.0%
TTGTACAATTGCACAAAACT+TGG + chr2_3:38675966-38675985 Msa0290800:intron 30.0%
!!! TGAGTTTTTTAAAGGACTAG+AGG - chr2_3:38676027-38676046 None:intergenic 30.0%
! TTTATCGGGTGTTTAAAGTT+TGG + chr2_3:38676069-38676088 Msa0290800:intron 30.0%
! TTATCGGGTGTTTAAAGTTT+GGG + chr2_3:38676070-38676089 Msa0290800:intron 30.0%
!!! CTTGTTGTTTTTGTACATAG+AGG + chr2_3:38676297-38676316 Msa0290800:intron 30.0%
!!! TGTTGTTTTTGTACATAGAG+GGG + chr2_3:38676299-38676318 Msa0290800:intron 30.0%
! CGTCTTAACTTTTATCTTTC+AGG + chr2_3:38676526-38676545 Msa0290800:intron 30.0%
! ACACTACTTTGGAAATCAAT+GGG + chr2_3:38676612-38676631 Msa0290800:CDS 30.0%
CTGTACAGCTATAAAAACAT+TGG + chr2_3:38676740-38676759 Msa0290800:intron 30.0%
CTCAAATTAAGATTTGAAGG+TGG - chr2_3:38676966-38676985 None:intergenic 30.0%
ATTAGAAACAATGTCCATGT+TGG - chr2_3:38677096-38677115 None:intergenic 30.0%
GAAAGAATAATTGATCAAGC+GGG - chr2_3:38677347-38677366 None:intergenic 30.0%
GGAAAGAATAATTGATCAAG+CGG - chr2_3:38677348-38677367 None:intergenic 30.0%
!!! TCCTGGAATTGATTTTTTTG+GGG + chr2_3:38677379-38677398 Msa0290800:intron 30.0%
!!! GAATTGATTTTTTTGGGGAT+AGG + chr2_3:38677384-38677403 Msa0290800:intron 30.0%
GGGTTGAATCAAATCATAAT+GGG - chr2_3:38677597-38677616 None:intergenic 30.0%
GAATAACTGAATGATCAAGT+TGG - chr2_3:38677641-38677660 None:intergenic 30.0%
TTCCATAACTATTATTCGTC+AGG + chr2_3:38677706-38677725 Msa0290800:intron 30.0%
! TTTGCTTTCCTTTTCTCTTT+CGG + chr2_3:38677817-38677836 Msa0290800:intron 30.0%
TTAGTACAAAACAACTCAAC+AGG - chr2_3:38678269-38678288 None:intergenic 30.0%
TTGCGACTGAAAAAAAATGA+AGG + chr2_3:38678312-38678331 Msa0290800:intron 30.0%
TTACTATCGACATCTTCAAT+TGG + chr2_3:38678451-38678470 Msa0290800:intron 30.0%
CAAGTATACATGCTAAAATG+TGG + chr2_3:38678493-38678512 Msa0290800:intron 30.0%
!! CAGGATCTGTTTTAAACAAA+AGG - chr2_3:38678599-38678618 None:intergenic 30.0%
!!! ACAAGACCTTTGTTTTATCT+TGG + chr2_3:38678631-38678650 Msa0290800:intron 30.0%
! TTTTAAATTGTGGTTCGCAA+CGG + chr2_3:38678901-38678920 Msa0290800:intron 30.0%
! ACTACTGTGTTCTCAATTTT+GGG - chr2_3:38679161-38679180 None:intergenic 30.0%
TTCTGATATTTCCATGAGTT+AGG + chr2_3:38679204-38679223 Msa0290800:three_prime_UTR 30.0%
TATAAGATTGCAGACATATC+TGG + chr2_3:38679280-38679299 Msa0290800:three_prime_UTR 30.0%
TAATAAAAAGGACATTGTCC+TGG + chr2_3:38679356-38679375 Msa0290800:three_prime_UTR 30.0%
! ATAGTTGTTGTTGTTGTTGG+TGG + chr2_3:38673116-38673135 Msa0290800:five_prime_UTR 35.0%
AAAACCAGAGAACACATTCT+AGG + chr2_3:38673144-38673163 Msa0290800:five_prime_UTR 35.0%
AAACCAGAGAACACATTCTA+GGG + chr2_3:38673145-38673164 Msa0290800:five_prime_UTR 35.0%
AATCCATATGCAAACAGACA+AGG + chr2_3:38673405-38673424 Msa0290800:intron 35.0%
TGCTTATAATTGAGACCAGA+GGG - chr2_3:38673822-38673841 None:intergenic 35.0%
TTGCTTATAATTGAGACCAG+AGG - chr2_3:38673823-38673842 None:intergenic 35.0%
! TTGCTTATATTTGAGACCAG+AGG + chr2_3:38673898-38673917 Msa0290800:intron 35.0%
! TGCTTATATTTGAGACCAGA+GGG + chr2_3:38673899-38673918 Msa0290800:intron 35.0%
!!! GGAGTATTGATTTTAGGTCT+TGG + chr2_3:38673920-38673939 Msa0290800:intron 35.0%
CATACAATACACCAAAATGG+TGG + chr2_3:38674002-38674021 Msa0290800:intron 35.0%
AATAAAAAAAAGGGGCAGCT+TGG - chr2_3:38674070-38674089 None:intergenic 35.0%
TAGTTAATCCAGAACAGAAG+TGG + chr2_3:38674102-38674121 Msa0290800:intron 35.0%
GACGAACATCCCATAAAAAA+TGG - chr2_3:38674291-38674310 None:intergenic 35.0%
ACAGCATCTTTCAGATAATC+AGG - chr2_3:38674313-38674332 None:intergenic 35.0%
TGATTATCTGAAAGATGCTG+TGG + chr2_3:38674312-38674331 Msa0290800:intron 35.0%
AAACCTCTTCACAACAATGA+AGG - chr2_3:38674358-38674377 None:intergenic 35.0%
GTATTAGTTCAAAGTCTACG+AGG + chr2_3:38674504-38674523 Msa0290800:CDS 35.0%
!! CTTCTTTTTCTGTCATTTGC+CGG + chr2_3:38674613-38674632 Msa0290800:intron 35.0%
AAGACAAGGGTTGGAATTAA+CGG + chr2_3:38674862-38674881 Msa0290800:CDS 35.0%
ATATGGAATGCAAAGCTTGT+AGG - chr2_3:38675004-38675023 None:intergenic 35.0%
!! TTTTGGAAGAATTGGAAGGT+TGG + chr2_3:38675554-38675573 Msa0290800:CDS 35.0%
GCTCTGATATTTAGACATGT+TGG + chr2_3:38675833-38675852 Msa0290800:intron 35.0%
!!! GTTTTTTAAAGGACTAGAGG+AGG - chr2_3:38676024-38676043 None:intergenic 35.0%
AAAACAATAAAAGGGCAACC+CGG - chr2_3:38676485-38676504 None:intergenic 35.0%
TTCAAGTATGATTCCACTCA+TGG + chr2_3:38676557-38676576 Msa0290800:intron 35.0%
ACCATTCAAGGGAACTATTA+AGG + chr2_3:38676580-38676599 Msa0290800:CDS 35.0%
ACCTTAATAGTTCCCTTGAA+TGG - chr2_3:38676584-38676603 None:intergenic 35.0%
! CAAGGGAACTATTAAGGTTT+TGG + chr2_3:38676586-38676605 Msa0290800:CDS 35.0%
! GACACTACTTTGGAAATCAA+TGG + chr2_3:38676611-38676630 Msa0290800:CDS 35.0%
AGGTTAAAGTTGTGAGCAAA+AGG + chr2_3:38676639-38676658 Msa0290800:CDS 35.0%
ATGTTGCATGTATGTGTTAC+TGG + chr2_3:38676693-38676712 Msa0290800:intron 35.0%
AGAGAAAACACTAAATGCAC+AGG - chr2_3:38676916-38676935 None:intergenic 35.0%
ATTTGAAGGTGGAAAGAGTA+AGG - chr2_3:38676955-38676974 None:intergenic 35.0%
! CTTATCCTTTTCCACCATAT+AGG + chr2_3:38676986-38677005 Msa0290800:intron 35.0%
TTGAAGGACATGGAAAATGA+TGG + chr2_3:38677200-38677219 Msa0290800:intron 35.0%
AAGTCTGGCATCATCTATTT+AGG + chr2_3:38677262-38677281 Msa0290800:intron 35.0%
AGTCTGGCATCATCTATTTA+GGG + chr2_3:38677263-38677282 Msa0290800:intron 35.0%
AATTCCAGGATATGTCCTTA+AGG - chr2_3:38677369-38677388 None:intergenic 35.0%
TCCCCAAAAAAATCAATTCC+AGG - chr2_3:38677383-38677402 None:intergenic 35.0%
AGTGAACTTTATGGAGTTGA+TGG + chr2_3:38677525-38677544 Msa0290800:intron 35.0%
! GCTTTTGCATGAGAATTATG+TGG + chr2_3:38677571-38677590 Msa0290800:intron 35.0%
! CGGGTTGAATCAAATCATAA+TGG - chr2_3:38677598-38677617 None:intergenic 35.0%
TTCTGACATGGAAGGAAATA+AGG - chr2_3:38677663-38677682 None:intergenic 35.0%
TTGTATGCAAGTTTCTGACA+TGG - chr2_3:38677675-38677694 None:intergenic 35.0%
CACCTGACGAATAATAGTTA+TGG - chr2_3:38677711-38677730 None:intergenic 35.0%
CATAACTATTATTCGTCAGG+TGG + chr2_3:38677709-38677728 Msa0290800:intron 35.0%
GAAAGAGAAAAGGAAAGCAA+AGG - chr2_3:38677818-38677837 None:intergenic 35.0%
TGGTTTATCCGAAAGAGAAA+AGG - chr2_3:38677828-38677847 None:intergenic 35.0%
! TTGGTATTTTGTGAAATCCC+AGG + chr2_3:38678063-38678082 Msa0290800:intron 35.0%
AAAGTCCTTCCTGAACTAAA+TGG + chr2_3:38678094-38678113 Msa0290800:CDS 35.0%
!! GTTTTCCATTTAGTTCAGGA+AGG - chr2_3:38678102-38678121 None:intergenic 35.0%
!! GTGAGTTTTCCATTTAGTTC+AGG - chr2_3:38678106-38678125 None:intergenic 35.0%
GAACTAAATGGAAAACTCAC+TGG + chr2_3:38678106-38678125 Msa0290800:CDS 35.0%
AAATGGAAAACTCACTGGAA+TGG + chr2_3:38678111-38678130 Msa0290800:CDS 35.0%
!! GTTGTTTTGTACTAACCCTT+CGG + chr2_3:38678274-38678293 Msa0290800:intron 35.0%
AATTCTTGGATACACAGATG+AGG + chr2_3:38678361-38678380 Msa0290800:CDS 35.0%
!!! GTCTTGTTTTATGGCAAATC+AGG - chr2_3:38678618-38678637 None:intergenic 35.0%
AGGAGACCAAGATAAAACAA+AGG - chr2_3:38678640-38678659 None:intergenic 35.0%
!!! GCACACATGGTTTTAAATTG+TGG + chr2_3:38678891-38678910 Msa0290800:intron 35.0%
CTTCAAAATCCACGATATTG+AGG - chr2_3:38678936-38678955 None:intergenic 35.0%
! GAGATTTTAAATTGCAGTCG+TGG - chr2_3:38679022-38679041 None:intergenic 35.0%
! CACTACTGTGTTCTCAATTT+TGG - chr2_3:38679162-38679181 None:intergenic 35.0%
GTTAAAATTAGTGGCTGCTT+AGG + chr2_3:38679226-38679245 Msa0290800:three_prime_UTR 35.0%
! TCATCTATTTCTTCCTCTGT+TGG - chr2_3:38679313-38679332 None:intergenic 35.0%
CTAATTCCAAACATGTAACC+AGG - chr2_3:38679377-38679396 None:intergenic 35.0%
AGATCTGAGAAGAGAAGAAG+CGG - chr2_3:38673199-38673218 None:intergenic 40.0%
TGTCCTTGTCTGTTTGCATA+TGG - chr2_3:38673411-38673430 None:intergenic 40.0%
CAGAAAGAAAACAACAGAGC+TGG + chr2_3:38673648-38673667 Msa0290800:intron 40.0%
CCTAAAATCAATACTCCCTC+TGG - chr2_3:38673917-38673936 None:intergenic 40.0%
!!! CCAGAGGGAGTATTGATTTT+AGG + chr2_3:38673914-38673933 Msa0290800:intron 40.0%
AGCTAAATCCACTTCTGTTC+TGG - chr2_3:38674113-38674132 None:intergenic 40.0%
! AGAAGTGGATTTAGCTGACA+GGG + chr2_3:38674117-38674136 Msa0290800:intron 40.0%
! AAAAAGTGTGCCCCTACAAT+AGG - chr2_3:38674170-38674189 None:intergenic 40.0%
!!! ATTGTAGGGGCACACTTTTT+TGG + chr2_3:38674170-38674189 Msa0290800:intron 40.0%
!!! TTGTAGGGGCACACTTTTTT+GGG + chr2_3:38674171-38674190 Msa0290800:intron 40.0%
! TGCTGTGGAAATTTTTCTGC+TGG + chr2_3:38674327-38674346 Msa0290800:intron 40.0%
ACTCCTTCATTGTTGTGAAG+AGG + chr2_3:38674352-38674371 Msa0290800:intron 40.0%
AAGCACCTGAATCACAGAAA+CGG - chr2_3:38674471-38674490 None:intergenic 40.0%
GTAAACTTTGCTACAAAGCC+TGG + chr2_3:38675470-38675489 Msa0290800:intron 40.0%
!!! TGTGCAGGTTTTGGAAGAAT+TGG + chr2_3:38675546-38675565 Msa0290800:intron 40.0%
!!! CAGGTTTTGGAAGAATTGGA+AGG + chr2_3:38675550-38675569 Msa0290800:intron 40.0%
! TAACATAACGGGAAACAACG+AGG - chr2_3:38675778-38675797 None:intergenic 40.0%
CATTCCAACTGAATCAGGAT+CGG - chr2_3:38675897-38675916 None:intergenic 40.0%
CAGAACATTCCAACTGAATC+AGG - chr2_3:38675902-38675921 None:intergenic 40.0%
TTCAGTTATGGTCAGGTACT+AGG + chr2_3:38676244-38676263 Msa0290800:intron 40.0%
GTTGTTGTCATGTGACTGAA+AGG + chr2_3:38676344-38676363 Msa0290800:intron 40.0%
AACAGCCTCTTGTGTAAAAC+AGG + chr2_3:38676387-38676406 Msa0290800:intron 40.0%
ACAGCCTCTTGTGTAAAACA+GGG + chr2_3:38676388-38676407 Msa0290800:intron 40.0%
! CTTACCCTGTTTTACACAAG+AGG - chr2_3:38676395-38676414 None:intergenic 40.0%
CTCTTGTGTAAAACAGGGTA+AGG + chr2_3:38676393-38676412 Msa0290800:intron 40.0%
CGTACAATACACCAAATGGT+GGG + chr2_3:38676419-38676438 Msa0290800:intron 40.0%
!!! GGTTTTGGATGACACTACTT+TGG + chr2_3:38676601-38676620 Msa0290800:CDS 40.0%
TTTGGAAATCAATGGGAAGC+AGG + chr2_3:38676619-38676638 Msa0290800:CDS 40.0%
! TTACTGGTTGCCAGTATTTG+TGG + chr2_3:38676709-38676728 Msa0290800:intron 40.0%
AGTAACACCTCCACAAATAC+TGG - chr2_3:38676722-38676741 None:intergenic 40.0%
GACTATGTCATTGAGTCTTC+AGG + chr2_3:38676834-38676853 Msa0290800:CDS 40.0%
TTCACTCCTACCACAAACAT+AGG - chr2_3:38677056-38677075 None:intergenic 40.0%
GAAGACATACAACTCCAACA+TGG + chr2_3:38677079-38677098 Msa0290800:CDS 40.0%
AGGAGGGAACTCAATAAAGA+TGG - chr2_3:38677179-38677198 None:intergenic 40.0%
! CATTTTCCATGTCCTTCAAG+AGG - chr2_3:38677199-38677218 None:intergenic 40.0%
!!! TGCTTTTGGGGTATCCTTAA+CGG + chr2_3:38677237-38677256 Msa0290800:intron 40.0%
CTTTCCTTAAGGACATATCC+TGG + chr2_3:38677362-38677381 Msa0290800:intron 40.0%
ATGCAAGTTTCTGACATGGA+AGG - chr2_3:38677671-38677690 None:intergenic 40.0%
!! AGGAAAGCAAAGGCTTTAAG+TGG - chr2_3:38677808-38677827 None:intergenic 40.0%
GCAACACAAAAGACTGTAGA+TGG + chr2_3:38677904-38677923 Msa0290800:intron 40.0%
TGTAGATGGTCCTTCAATGA+AGG + chr2_3:38677918-38677937 Msa0290800:CDS 40.0%
ATGGTCCTTCAATGAAGGAT+TGG + chr2_3:38677923-38677942 Msa0290800:CDS 40.0%
CTTCAATGAAGGATTGGAGA+GGG + chr2_3:38677929-38677948 Msa0290800:CDS 40.0%
TTCAATGAAGGATTGGAGAG+GGG + chr2_3:38677930-38677949 Msa0290800:CDS 40.0%
ACGACAGAAACATTAGCAGT+AGG - chr2_3:38678148-38678167 None:intergenic 40.0%
! TACTGCTAATGTTTCTGTCG+TGG + chr2_3:38678147-38678166 Msa0290800:CDS 40.0%
TGCTTTGACATCTTCATAGG+AGG - chr2_3:38678200-38678219 None:intergenic 40.0%
!! TGCTGCTTTGACATCTTCAT+AGG - chr2_3:38678203-38678222 None:intergenic 40.0%
! AGTCTCTTGTTTATCTGCTC+TGG + chr2_3:38678231-38678250 Msa0290800:intron 40.0%
! AAAATGAAGGCTTGCTTCAG+AGG + chr2_3:38678325-38678344 Msa0290800:intron 40.0%
! AAATGAAGGCTTGCTTCAGA+GGG + chr2_3:38678326-38678345 Msa0290800:intron 40.0%
GGACAATTGAAGGGAATTCT+TGG + chr2_3:38678347-38678366 Msa0290800:CDS 40.0%
GTTGTCTCTAATGACTTCGT+TGG + chr2_3:38678386-38678405 Msa0290800:CDS 40.0%
!! ATGACTTCGTTGGTGATTCA+AGG + chr2_3:38678396-38678415 Msa0290800:CDS 40.0%
GTCGAGTATCTTTGATGCTA+AGG + chr2_3:38678752-38678771 Msa0290800:CDS 40.0%
AGTATCTTTGATGCTAAGGC+AGG + chr2_3:38678756-38678775 Msa0290800:CDS 40.0%
GTATCTTTGATGCTAAGGCA+GGG + chr2_3:38678757-38678776 Msa0290800:CDS 40.0%
ATAGACTAGTAGTGCACACA+TGG + chr2_3:38678878-38678897 Msa0290800:intron 40.0%
!!! GGATTTTGAAGTCTCAGCAA+CGG + chr2_3:38678945-38678964 Msa0290800:intron 40.0%
ACAGTAGTGTCTCTTACTGT+TGG + chr2_3:38679173-38679192 Msa0290800:three_prime_UTR 40.0%
! CTGCTTAGGTTCTCAGATTT+TGG + chr2_3:38679240-38679259 Msa0290800:three_prime_UTR 40.0%
TATTTCTTCCTCTGTTGGAG+GGG - chr2_3:38679308-38679327 None:intergenic 40.0%
! CTATTTCTTCCTCTGTTGGA+GGG - chr2_3:38679309-38679328 None:intergenic 40.0%
! TCTATTTCTTCCTCTGTTGG+AGG - chr2_3:38679310-38679329 None:intergenic 40.0%
CATTGTCCTGGTTACATGTT+TGG + chr2_3:38679368-38679387 Msa0290800:three_prime_UTR 40.0%
TTTCTCAGCGGAGCTTCTTA+TGG - chr2_3:38673054-38673073 None:intergenic 45.0%
GAACCCTAGAATGTGTTCTC+TGG - chr2_3:38673151-38673170 None:intergenic 45.0%
GGAAGAAGGTGAAGAAACGA+TGG - chr2_3:38673223-38673242 None:intergenic 45.0%
AGAAGAGACCTGAAAGCGAT+CGG - chr2_3:38673247-38673266 None:intergenic 45.0%
! CAGAAGTGGATTTAGCTGAC+AGG + chr2_3:38674116-38674135 Msa0290800:intron 45.0%
!!! TGTAGGGGCACACTTTTTTG+GGG + chr2_3:38674172-38674191 Msa0290800:intron 45.0%
CTTGTCCGTTTCTGTGATTC+AGG + chr2_3:38674463-38674482 Msa0290800:intron 45.0%
GTTTCTGTGATTCAGGTGCT+TGG + chr2_3:38674470-38674489 Msa0290800:intron 45.0%
TTCTCAGAAACTGCAATGCC+CGG + chr2_3:38674682-38674701 Msa0290800:intron 45.0%
! ACTGACTTTGTACAGGGAGA+GGG - chr2_3:38674743-38674762 None:intergenic 45.0%
!! TACTGACTTTGTACAGGGAG+AGG - chr2_3:38674744-38674763 None:intergenic 45.0%
GAACAGACAAGACCAACAAC+AGG - chr2_3:38674823-38674842 None:intergenic 45.0%
TGTTACGTGTAGCTACTTCG+CGG + chr2_3:38675577-38675596 Msa0290800:CDS 45.0%
TAGACATGTTGGCAATAGGC+AGG + chr2_3:38675844-38675863 Msa0290800:intron 45.0%
TATGCCGATCCTGATTCAGT+TGG + chr2_3:38675890-38675909 Msa0290800:intron 45.0%
TCAGTACAGTACATGCCATG+AGG + chr2_3:38676119-38676138 Msa0290800:intron 45.0%
TGTACATAGAGGGGTAACCT+TGG + chr2_3:38676308-38676327 Msa0290800:intron 45.0%
GTCATGTGACTGAAAGGTCA+CGG + chr2_3:38676350-38676369 Msa0290800:intron 45.0%
TCATGTGACTGAAAGGTCAC+GGG + chr2_3:38676351-38676370 Msa0290800:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - chr2_3:38676384-38676403 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG + chr2_3:38676415-38676434 Msa0290800:intron 45.0%
GCGTACAATACACCAAATGG+TGG + chr2_3:38676418-38676437 Msa0290800:intron 45.0%
TTCCACTCATGGACCATTCA+AGG + chr2_3:38676568-38676587 Msa0290800:CDS 45.0%
TCCACTCATGGACCATTCAA+GGG + chr2_3:38676569-38676588 Msa0290800:CDS 45.0%
!! GAAAGCGTCATCGCATTTGA+AGG + chr2_3:38676875-38676894 Msa0290800:CDS 45.0%
AGGTGGAAAGAGTAAGGCAA+AGG - chr2_3:38676949-38676968 None:intergenic 45.0%
! TCCTTTTCCACCATATAGGC+TGG + chr2_3:38676990-38677009 Msa0290800:intron 45.0%
! ACCAGCCTATATGGTGGAAA+AGG - chr2_3:38676994-38677013 None:intergenic 45.0%
TTTCTTGGCACCAGCCTATA+TGG - chr2_3:38677003-38677022 None:intergenic 45.0%
AACATAGGTGCATCAGCAGA+TGG - chr2_3:38677041-38677060 None:intergenic 45.0%
TGCTGATGCACCTATGTTTG+TGG + chr2_3:38677043-38677062 Msa0290800:CDS 45.0%
GATGCACCTATGTTTGTGGT+AGG + chr2_3:38677047-38677066 Msa0290800:CDS 45.0%
TACGCAATGCAAACGAACCT+TGG - chr2_3:38677153-38677172 None:intergenic 45.0%
ATTGAGTTCCCTCCTCTTGA+AGG + chr2_3:38677184-38677203 Msa0290800:intron 45.0%
TTCCATGTCCTTCAAGAGGA+GGG - chr2_3:38677195-38677214 None:intergenic 45.0%
TTTCCATGTCCTTCAAGAGG+AGG - chr2_3:38677196-38677215 None:intergenic 45.0%
!!! GCTTTTGGGGTATCCTTAAC+GGG + chr2_3:38677238-38677257 Msa0290800:intron 45.0%
!!! CTTTTGGGGTATCCTTAACG+GGG + chr2_3:38677239-38677258 Msa0290800:intron 45.0%
GAGGAGTTTGGTATCGTTGA+AGG + chr2_3:38677737-38677756 Msa0290800:CDS 45.0%
CCTCTCCAATCCTTCATTGA+AGG - chr2_3:38677931-38677950 None:intergenic 45.0%
CCTTCAATGAAGGATTGGAG+AGG + chr2_3:38677928-38677947 Msa0290800:CDS 45.0%
TCAATGAAGGATTGGAGAGG+GGG + chr2_3:38677931-38677950 Msa0290800:CDS 45.0%
ATCTCTTACCTTTGCAGCAC+CGG - chr2_3:38677992-38678011 None:intergenic 45.0%
TTTGTGAAATCCCAGGCTGT+TGG + chr2_3:38678070-38678089 Msa0290800:intron 45.0%
!!! AGGAGGCATTCTTTTGAAGC+CGG - chr2_3:38678183-38678202 None:intergenic 45.0%
TGCTTCAGAGGGACAATTGA+AGG + chr2_3:38678337-38678356 Msa0290800:CDS 45.0%
GCTTCAGAGGGACAATTGAA+GGG + chr2_3:38678338-38678357 Msa0290800:CDS 45.0%
AAAAGGCAGCTTGCGTTCTA+TGG - chr2_3:38678582-38678601 None:intergenic 45.0%
TTTGATGCTAAGGCAGGGAT+TGG + chr2_3:38678762-38678781 Msa0290800:CDS 45.0%
TTGATGCTAAGGCAGGGATT+GGG + chr2_3:38678763-38678782 Msa0290800:CDS 45.0%
TAGCAAGTCTTTCGTGAAGC+TGG + chr2_3:38678788-38678807 Msa0290800:CDS 45.0%
TCTCGTGGTATGACAATGAG+TGG + chr2_3:38678811-38678830 Msa0290800:intron 45.0%
CTCGTGGTATGACAATGAGT+GGG + chr2_3:38678812-38678831 Msa0290800:intron 45.0%
TCGTGGTATGACAATGAGTG+GGG + chr2_3:38678813-38678832 Msa0290800:intron 45.0%
ATGACAATGAGTGGGGTTAC+AGG + chr2_3:38678820-38678839 Msa0290800:intron 45.0%
TCTCATGCATCTCATGCACA+TGG + chr2_3:38679038-38679057 Msa0290800:intron 45.0%
CTCATGCATCTCATGCACAT+GGG + chr2_3:38679039-38679058 Msa0290800:intron 45.0%
!! TTGAAAATATATTAAAAATA+TGG - chr2_3:38679410-38679429 None:intergenic 5.0%
GCTCCTTTCACCTTCTCCAA+TGG + chr2_3:38673173-38673192 Msa0290800:exon 50.0%
AGAAGAGAAGAAGCGGCCAT+TGG - chr2_3:38673192-38673211 None:intergenic 50.0%
TGAAAGCGATCGGAGGAAGA+AGG - chr2_3:38673237-38673256 None:intergenic 50.0%
TTCTTCCTCCGATCGCTTTC+AGG + chr2_3:38673236-38673255 Msa0290800:CDS 50.0%
TATAGGCAGCATACTCCCTC+TGG + chr2_3:38673804-38673823 Msa0290800:intron 50.0%
! CTAAAGCACCCGCATACACA+GGG - chr2_3:38674042-38674061 None:intergenic 50.0%
! ACTAAAGCACCCGCATACAC+AGG - chr2_3:38674043-38674062 None:intergenic 50.0%
GTGGATTTAGCTGACAGGGT+AGG + chr2_3:38674121-38674140 Msa0290800:intron 50.0%
GTGATTCAGGTGCTTGGCAA+TGG + chr2_3:38674476-38674495 Msa0290800:intron 50.0%
TGTTCAGACTCAAGCAGCAC+TGG + chr2_3:38674838-38674857 Msa0290800:intron 50.0%
GTTCAGACTCAAGCAGCACT+GGG + chr2_3:38674839-38674858 Msa0290800:intron 50.0%
! AAGCAGCACTGGGAAGACAA+GGG + chr2_3:38674849-38674868 Msa0290800:CDS 50.0%
GGTGTATGCAAATCTGCGCA+TGG + chr2_3:38675397-38675416 Msa0290800:intron 50.0%
GTTACGTGTAGCTACTTCGC+GGG + chr2_3:38675578-38675597 Msa0290800:CDS 50.0%
CAACTTTACCAGTTGCGCCA+AGG - chr2_3:38676328-38676347 None:intergenic 50.0%
TCCCTTGAATGGTCCATGAG+TGG - chr2_3:38676573-38676592 None:intergenic 50.0%
CTGGTTGCCAGTATTTGTGG+AGG + chr2_3:38676712-38676731 Msa0290800:intron 50.0%
TTCTGTACTCAGAGATCCCG+TGG + chr2_3:38676785-38676804 Msa0290800:intron 50.0%
! GAGATCCCTTGGGGTGATTT+TGG + chr2_3:38676807-38676826 Msa0290800:CDS 50.0%
CAGCACCAAAATCACCCCAA+GGG - chr2_3:38676815-38676834 None:intergenic 50.0%
TCAGCACCAAAATCACCCCA+AGG - chr2_3:38676816-38676835 None:intergenic 50.0%
TTGTCTTGCACCTCTTGCCA+AGG + chr2_3:38677133-38677152 Msa0290800:CDS 50.0%
TGCAAACGAACCTTGGCAAG+AGG - chr2_3:38677146-38677165 None:intergenic 50.0%
TTCCCTCCTCTTGAAGGACA+TGG + chr2_3:38677190-38677209 Msa0290800:intron 50.0%
GTATCCTTAACGGGGAAGTC+TGG + chr2_3:38677247-38677266 Msa0290800:intron 50.0%
TTGATTCAACCCGAGCTCAC+TGG + chr2_3:38677605-38677624 Msa0290800:intron 50.0%
TATTCGTCAGGTGGTTCACG+AGG + chr2_3:38677718-38677737 Msa0290800:intron 50.0%
ACAACCGTGCATGCAACAAC+AGG + chr2_3:38677767-38677786 Msa0290800:CDS 50.0%
GAGACCTGTTGTTGCATGCA+CGG - chr2_3:38677774-38677793 None:intergenic 50.0%
!! TTTGCAGCACCGGTTGAACT+TGG - chr2_3:38677982-38678001 None:intergenic 50.0%
!! AAGTTCAACCGGTGCTGCAA+AGG + chr2_3:38677981-38678000 Msa0290800:CDS 50.0%
! GGTGCTGCAAAGGTAAGAGA+TGG + chr2_3:38677991-38678010 Msa0290800:intron 50.0%
AAGGACTTTGCCAACAGCCT+GGG - chr2_3:38678083-38678102 None:intergenic 50.0%
CAAATGCGGCCTCAATATCG+TGG + chr2_3:38678924-38678943 Msa0290800:intron 50.0%
! TTGCAGTCGTGGTTGCTTTG+CGG - chr2_3:38679011-38679030 None:intergenic 50.0%
!! AACCGAGTGTTGGACCTTGT+AGG + chr2_3:38679115-38679134 Msa0290800:CDS 50.0%
!! ACCGAGTGTTGGACCTTGTA+GGG + chr2_3:38679116-38679135 Msa0290800:CDS 50.0%
CGGCCATTGGAGAAGGTGAA+AGG - chr2_3:38673179-38673198 None:intergenic 55.0%
GAAGAAGCGGCCATTGGAGA+AGG - chr2_3:38673186-38673205 None:intergenic 55.0%
AGAGACCTGAAAGCGATCGG+AGG - chr2_3:38673244-38673263 None:intergenic 55.0%
CATACACAGGGTCTGGGAAG+GGG - chr2_3:38674030-38674049 None:intergenic 55.0%
GCATACACAGGGTCTGGGAA+GGG - chr2_3:38674031-38674050 None:intergenic 55.0%
CTTCCCAGACCCTGTGTATG+CGG + chr2_3:38674030-38674049 Msa0290800:intron 55.0%
TTCCCAGACCCTGTGTATGC+GGG + chr2_3:38674031-38674050 Msa0290800:intron 55.0%
GCCTATCAGGGCTACAGCAA+CGG + chr2_3:38674713-38674732 Msa0290800:CDS 55.0%
TCCGTTGCTGTAGCCCTGAT+AGG - chr2_3:38674717-38674736 None:intergenic 55.0%
! CAAGCAGCACTGGGAAGACA+AGG + chr2_3:38674848-38674867 Msa0290800:CDS 55.0%
! AGCACTGGGAAGACAAGGGT+TGG + chr2_3:38674853-38674872 Msa0290800:CDS 55.0%
AAGGTCACGGGTTCAAGTCC+TGG + chr2_3:38676363-38676382 Msa0290800:intron 55.0%
CAAGAGCTCCCGCATATGCA+GGG - chr2_3:38676458-38676477 None:intergenic 55.0%
ACAAGAGCTCCCGCATATGC+AGG - chr2_3:38676459-38676478 None:intergenic 55.0%
AGATCCCGTGGAGATCCCTT+GGG + chr2_3:38676797-38676816 Msa0290800:CDS 55.0%
ATCACCCCAAGGGATCTCCA+CGG - chr2_3:38676805-38676824 None:intergenic 55.0%
CTTGGCACCAGCCTATATGG+TGG - chr2_3:38677000-38677019 None:intergenic 55.0%
GATGCCAGACTTCCCCGTTA+AGG - chr2_3:38677254-38677273 None:intergenic 55.0%
CAGGTGGTTCACGAGGAGTT+TGG + chr2_3:38677725-38677744 Msa0290800:intron 55.0%
AAGGATTGGAGAGGGGGAAG+AGG + chr2_3:38677937-38677956 Msa0290800:CDS 55.0%
GAAGGACTTTGCCAACAGCC+TGG - chr2_3:38678084-38678103 None:intergenic 55.0%
CTGTCGTGGACTTAACCTGC+CGG + chr2_3:38678161-38678180 Msa0290800:CDS 55.0%
!!! GGCATTCTTTTGAAGCCGGC+AGG - chr2_3:38678179-38678198 None:intergenic 55.0%
! CTTTCGTGAAGCTGGTCTCG+TGG + chr2_3:38678796-38678815 Msa0290800:CDS 55.0%
GTGGTTCGCAACGGCAAATG+CGG + chr2_3:38678910-38678929 Msa0290800:intron 55.0%
CCAACACTCGGTTGCTGCAA+TGG - chr2_3:38679108-38679127 None:intergenic 55.0%
CCATTGCAGCAACCGAGTGT+TGG + chr2_3:38679105-38679124 Msa0290800:intron 55.0%
GCCCTACAAGGTCCAACACT+CGG - chr2_3:38679120-38679139 None:intergenic 55.0%
GTTGGACCTTGTAGGGCACA+TGG + chr2_3:38679123-38679142 Msa0290800:CDS 55.0%
CCAATGCCATGTGCCCTACA+AGG - chr2_3:38679132-38679151 None:intergenic 55.0%
CCTTGTAGGGCACATGGCAT+TGG + chr2_3:38679129-38679148 Msa0290800:CDS 55.0%
! TGTAGGGCACATGGCATTGG+TGG + chr2_3:38679132-38679151 Msa0290800:CDS 55.0%
!! GTAGGGCACATGGCATTGGT+GGG + chr2_3:38679133-38679152 Msa0290800:CDS 55.0%
!! TAGGGCACATGGCATTGGTG+GGG + chr2_3:38679134-38679153 Msa0290800:CDS 55.0%
! ATCTGGAACCCCTCCAACAG+AGG + chr2_3:38679297-38679316 Msa0290800:three_prime_UTR 55.0%
! GGGAAGGGGTCCCACCATTT+TGG - chr2_3:38674016-38674035 None:intergenic 60.0%
CGCATACACAGGGTCTGGGA+AGG - chr2_3:38674032-38674051 None:intergenic 60.0%
CACCCGCATACACAGGGTCT+GGG - chr2_3:38674036-38674055 None:intergenic 60.0%
CCTGATAGGCTGCATGCTCC+GGG - chr2_3:38674703-38674722 None:intergenic 60.0%
CCCTGATAGGCTGCATGCTC+CGG - chr2_3:38674704-38674723 None:intergenic 60.0%
CCGGAGCATGCAGCCTATCA+GGG + chr2_3:38674701-38674720 Msa0290800:CDS 60.0%
AGGGGTAACCTTGGCGCAAC+TGG + chr2_3:38676317-38676336 Msa0290800:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr2_3:38676431-38676450 Msa0290800:intron 60.0%
CATATGCAGGGTCCGGGAAG+GGG - chr2_3:38676446-38676465 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG - chr2_3:38676447-38676466 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG + chr2_3:38676446-38676465 Msa0290800:intron 60.0%
TTCCCGGACCCTGCATATGC+GGG + chr2_3:38676447-38676466 Msa0290800:intron 60.0%
ATGCGGGAGCTCTTGTGCAC+CGG + chr2_3:38676463-38676482 Msa0290800:intron 60.0%
GAGATCCCGTGGAGATCCCT+TGG + chr2_3:38676796-38676815 Msa0290800:intron 60.0%
GATCCCGTGGAGATCCCTTG+GGG + chr2_3:38676798-38676817 Msa0290800:CDS 60.0%
TCACCCCAAGGGATCTCCAC+GGG - chr2_3:38676804-38676823 None:intergenic 60.0%
CAACCCGAGCTCACTGGTGT+CGG + chr2_3:38677611-38677630 Msa0290800:intron 60.0%
AACCCGAGCTCACTGGTGTC+GGG + chr2_3:38677612-38677631 Msa0290800:intron 60.0%
ATCCCCGACACCAGTGAGCT+CGG - chr2_3:38677618-38677637 None:intergenic 60.0%
!! AGGGCACATGGCATTGGTGG+GGG + chr2_3:38679135-38679154 Msa0290800:CDS 60.0%
GCACCCGCATACACAGGGTC+TGG - chr2_3:38674037-38674056 None:intergenic 65.0%
CCCGGAGCATGCAGCCTATC+AGG + chr2_3:38674700-38674719 Msa0290800:CDS 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr2_3:38676433-38676452 None:intergenic 65.0%
CGCATATGCAGGGTCCGGGA+AGG - chr2_3:38676448-38676467 None:intergenic 65.0%
CTCCCGCATATGCAGGGTCC+GGG - chr2_3:38676452-38676471 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG - chr2_3:38676453-38676472 None:intergenic 65.0%
TGCGGGAGCTCTTGTGCACC+GGG + chr2_3:38676464-38676483 Msa0290800:intron 65.0%
! ACCCGAGCTCACTGGTGTCG+GGG + chr2_3:38677613-38677632 Msa0290800:intron 65.0%
TCCCCGACACCAGTGAGCTC+GGG - chr2_3:38677617-38677636 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 38673034 38679449 38673034 ID=Msa0290800;Name=Msa0290800
chr2_3 mRNA 38673034 38679449 38673034 ID=Msa0290800-mRNA-1;Parent=Msa0290800;Name=Msa0290800-mRNA-1;_AED=0.14;_eAED=0.14;_QI=158|0.84|0.85|1|1|1|14|281|406
chr2_3 exon 38673034 38673257 38673034 ID=Msa0290800-mRNA-1:exon:12554;Parent=Msa0290800-mRNA-1
chr2_3 exon 38674485 38674579 38674485 ID=Msa0290800-mRNA-1:exon:12555;Parent=Msa0290800-mRNA-1
chr2_3 exon 38674689 38674756 38674689 ID=Msa0290800-mRNA-1:exon:12556;Parent=Msa0290800-mRNA-1
chr2_3 exon 38674845 38674883 38674845 ID=Msa0290800-mRNA-1:exon:12557;Parent=Msa0290800-mRNA-1
chr2_3 exon 38675553 38675653 38675553 ID=Msa0290800-mRNA-1:exon:12558;Parent=Msa0290800-mRNA-1
chr2_3 exon 38676563 38676660 38676563 ID=Msa0290800-mRNA-1:exon:12559;Parent=Msa0290800-mRNA-1
chr2_3 exon 38676797 38676896 38676797 ID=Msa0290800-mRNA-1:exon:12560;Parent=Msa0290800-mRNA-1
chr2_3 exon 38677008 38677154 38677008 ID=Msa0290800-mRNA-1:exon:12561;Parent=Msa0290800-mRNA-1
chr2_3 exon 38677728 38677788 38677728 ID=Msa0290800-mRNA-1:exon:12562;Parent=Msa0290800-mRNA-1
chr2_3 exon 38677905 38678002 38677905 ID=Msa0290800-mRNA-1:exon:12563;Parent=Msa0290800-mRNA-1
chr2_3 exon 38678085 38678227 38678085 ID=Msa0290800-mRNA-1:exon:12564;Parent=Msa0290800-mRNA-1
chr2_3 exon 38678334 38678417 38678334 ID=Msa0290800-mRNA-1:exon:12565;Parent=Msa0290800-mRNA-1
chr2_3 exon 38678752 38678817 38678752 ID=Msa0290800-mRNA-1:exon:12566;Parent=Msa0290800-mRNA-1
chr2_3 exon 38679114 38679449 38679114 ID=Msa0290800-mRNA-1:exon:12567;Parent=Msa0290800-mRNA-1
chr2_3 five_prime_UTR 38673034 38673191 38673034 ID=Msa0290800-mRNA-1:five_prime_utr;Parent=Msa0290800-mRNA-1
chr2_3 CDS 38673192 38673257 38673192 ID=Msa0290800-mRNA-1:cds;Parent=Msa0290800-mRNA-1
chr2_3 CDS 38674485 38674579 38674485 ID=Msa0290800-mRNA-1:cds;Parent=Msa0290800-mRNA-1
chr2_3 CDS 38674689 38674756 38674689 ID=Msa0290800-mRNA-1:cds;Parent=Msa0290800-mRNA-1
chr2_3 CDS 38674845 38674883 38674845 ID=Msa0290800-mRNA-1:cds;Parent=Msa0290800-mRNA-1
chr2_3 CDS 38675553 38675653 38675553 ID=Msa0290800-mRNA-1:cds;Parent=Msa0290800-mRNA-1
chr2_3 CDS 38676563 38676660 38676563 ID=Msa0290800-mRNA-1:cds;Parent=Msa0290800-mRNA-1
chr2_3 CDS 38676797 38676896 38676797 ID=Msa0290800-mRNA-1:cds;Parent=Msa0290800-mRNA-1
chr2_3 CDS 38677008 38677154 38677008 ID=Msa0290800-mRNA-1:cds;Parent=Msa0290800-mRNA-1
chr2_3 CDS 38677728 38677788 38677728 ID=Msa0290800-mRNA-1:cds;Parent=Msa0290800-mRNA-1
chr2_3 CDS 38677905 38678002 38677905 ID=Msa0290800-mRNA-1:cds;Parent=Msa0290800-mRNA-1
chr2_3 CDS 38678085 38678227 38678085 ID=Msa0290800-mRNA-1:cds;Parent=Msa0290800-mRNA-1
chr2_3 CDS 38678334 38678417 38678334 ID=Msa0290800-mRNA-1:cds;Parent=Msa0290800-mRNA-1
chr2_3 CDS 38678752 38678817 38678752 ID=Msa0290800-mRNA-1:cds;Parent=Msa0290800-mRNA-1
chr2_3 CDS 38679114 38679168 38679114 ID=Msa0290800-mRNA-1:cds;Parent=Msa0290800-mRNA-1
chr2_3 three_prime_UTR 38679169 38679449 38679169 ID=Msa0290800-mRNA-1:three_prime_utr;Parent=Msa0290800-mRNA-1
Gene Sequence

>Msa0290800

ATGGCCGCTTCTTCTCTTCTCAGATCTGCCATCGTTTCTTCACCTTCTTCCTCCGATCGCTTTCAGGTGCTTGGCAATGGCTCAAGTATTAGTTCAAAGTCTACGAGGTTGCAAAACAACATATTTGGAACTTCAATTCCATGTGATTCATTAGTCTTACAAAACTGCAATGCCCGGAGCATGCAGCCTATCAGGGCTACAGCAACGGAAATCCCTCTCCCTGTACAAAACTCAAGCAGCACTGGGAAGACAAGGGTTGGAATTAACGGTTTTGGAAGAATTGGAAGGTTGGTGTTACGTGTAGCTACTTCGCGGGATGATATTGATGTTGTTGCAATTAATGATCCTTTTATTGATGCTAAATATATGTATGATTCCACTCATGGACCATTCAAGGGAACTATTAAGGTTTTGGATGACACTACTTTGGAAATCAATGGGAAGCAGGTTAAAGTTGTGAGCAAAAGAGATCCCGTGGAGATCCCTTGGGGTGATTTTGGTGCTGACTATGTCATTGAGTCTTCAGGAGTTTTTACAACATTAGAGAAAGCGTCATCGCATTTGAAGGCTGGTGCCAAGAAAATCATAATATCAGCTCCATCTGCTGATGCACCTATGTTTGTGGTAGGAGTGAATGAGAAGACATACAACTCCAACATGGACATTGTTTCTAATGCAAGCTGTACAACAAATTGTCTTGCACCTCTTGCCAAGGTGGTTCACGAGGAGTTTGGTATCGTTGAAGGTTTGATGACAACCGTGCATGCAACAACAGCAACACAAAAGACTGTAGATGGTCCTTCAATGAAGGATTGGAGAGGGGGAAGAGGAGCAGCCCAAAATATAATTCCAAGTTCAACCGGTGCTGCAAAGGCTGTTGGCAAAGTCCTTCCTGAACTAAATGGAAAACTCACTGGAATGGCATTTCGTGTACCTACTGCTAATGTTTCTGTCGTGGACTTAACCTGCCGGCTTCAAAAGAATGCCTCCTATGAAGATGTCAAAGCAGCAATAAAGCTTGCTTCAGAGGGACAATTGAAGGGAATTCTTGGATACACAGATGAGGATGTTGTCTCTAATGACTTCGTTGGTGATTCAAGGTCGAGTATCTTTGATGCTAAGGCAGGGATTGGGCTTAGCAAGTCTTTCGTGAAGCTGGTCTCGTGCAACCGAGTGTTGGACCTTGTAGGGCACATGGCATTGGTGGGGGCCCAAAATTGA

Protein sequence

>Msa0290800

MAASSLLRSAIVSSPSSSDRFQVLGNGSSISSKSTRLQNNIFGTSIPCDSLVLQNCNARSMQPIRATATEIPLPVQNSSSTGKTRVGINGFGRIGRLVLRVATSRDDIDVVAINDPFIDAKYMYDSTHGPFKGTIKVLDDTTLEINGKQVKVVSKRDPVEIPWGDFGADYVIESSGVFTTLEKASSHLKAGAKKIIISAPSADAPMFVVGVNEKTYNSNMDIVSNASCTTNCLAPLAKVVHEEFGIVEGLMTTVHATTATQKTVDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTANVSVVDLTCRLQKNASYEDVKAAIKLASEGQLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSKSFVKLVSCNRVLDLVGHMALVGAQN*