Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0453530 | XP_013459818.1 | 88.660 | 582 | 12 | 3 | 1 | 528 | 1 | 582 | 0.0 | 1031 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0453530 | sp|Q9SZ30|HIS4_ARATH | 75.725 | 552 | 78 | 4 | 31 | 528 | 43 | 592 | 0.0 | 846 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0453530 | A0A072UVM2 | 88.660 | 582 | 12 | 3 | 1 | 528 | 1 | 582 | 0.0 | 1031 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0453530 | Msa0458100 | 0.818332 | 2.071979e-52 | -8.615850e-47 |
| Msa0453530 | Msa0495620 | 0.817579 | 3.064804e-52 | -8.615850e-47 |
| Msa0453530 | Msa0707260 | 0.816593 | 5.106355e-52 | -8.615850e-47 |
| Msa0453530 | Msa1078080 | 0.803540 | 3.319577e-49 | -8.615850e-47 |
| Msa0453530 | Msa1226370 | 0.814931 | 1.198116e-51 | -8.615850e-47 |
| Msa0453530 | Msa1258460 | 0.800773 | 1.231567e-48 | -8.615850e-47 |
| Msa0453530 | Msa1419900 | 0.811976 | 5.346202e-51 | -8.615850e-47 |
| Msa0453530 | Msa1426320 | 0.803572 | 3.269840e-49 | -8.615850e-47 |
| Msa0356640 | Msa0453530 | 0.817787 | 2.751248e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0453530 | MtrunA17_Chr3g0099401 | 88.660 | 582 | 12 | 3 | 1 | 528 | 1 | 582 | 0.0 | 1031 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0453530 | AT4G26900.1 | 75.725 | 552 | 78 | 4 | 31 | 528 | 43 | 592 | 0.0 | 846 |
Find 136 sgRNAs with CRISPR-Local
Find 572 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAAAGGACTCAGAAATTT+TGG | 0.134153 | 3_3:-43968224 | Msa0453530:CDS |
| TGCAAGCCGTTTAGTCTTTC+CGG | 0.155933 | 3_3:-43970434 | Msa0453530:CDS |
| ACCTGGACTTGAAACCTTTA+TGG | 0.180165 | 3_3:+43965031 | None:intergenic |
| TCTTCTACTTCCACTGATTC+TGG | 0.203535 | 3_3:-43971364 | Msa0453530:intron |
| CTTGCATTCAAAATGTCTTC+TGG | 0.229616 | 3_3:+43970451 | None:intergenic |
| TTGTCTATTGTAAGGTTAAT+GGG | 0.234023 | 3_3:-43963824 | Msa0453530:intron |
| GAGCAGATATCAAGAGTTTA+TGG | 0.235737 | 3_3:-43965398 | Msa0453530:CDS |
| GTCAGCTTTCTAAACATTAC+TGG | 0.241338 | 3_3:-43966013 | Msa0453530:CDS |
| ACAAAATTTCTGTGACTCTT+TGG | 0.255628 | 3_3:-43962492 | Msa0453530:three_prime_UTR |
| TTGTAAAAGCAAATGGTAAA+AGG | 0.272140 | 3_3:+43962511 | None:intergenic |
| TTTGTCTATTGTAAGGTTAA+TGG | 0.272696 | 3_3:-43963825 | Msa0453530:intron |
| AAGCTTCAAAACTCGCAAAA+AGG | 0.295143 | 3_3:-43966593 | Msa0453530:CDS |
| ATGGAGGTGTTAAGTAAAAC+TGG | 0.296858 | 3_3:-43970388 | Msa0453530:CDS |
| TGGTGATCTACCAATGTTGC+AGG | 0.315191 | 3_3:-43965972 | Msa0453530:intron |
| GTATCCTCCACCTGTGACTA+TGG | 0.336952 | 3_3:-43968013 | Msa0453530:CDS |
| GTCTGGAATTGCACATCATT+TGG | 0.346057 | 3_3:+43965053 | None:intergenic |
| GACGGAGGAGGAGGGAAGTA+GGG | 0.347494 | 3_3:+43971467 | None:intergenic |
| CAGGCATATTCTTCTCCATT+TGG | 0.350924 | 3_3:+43964702 | None:intergenic |
| TTGCATTCAAAATGTCTTCT+GGG | 0.360568 | 3_3:+43970452 | None:intergenic |
| TCAAATCGCCCAACGGTTCC+AGG | 0.360875 | 3_3:+43968298 | None:intergenic |
| CGTCGCTTTAGCAGCTGAAA+TGG | 0.363297 | 3_3:+43971555 | None:intergenic |
| GTTGTGACTTTGCTTGATTA+TGG | 0.365393 | 3_3:-43971250 | Msa0453530:CDS |
| TACATCATACTGGTCTCCTT+TGG | 0.368896 | 3_3:+43966411 | None:intergenic |
| GCATCCGCTGCACTTGCTGC+TGG | 0.371137 | 3_3:-43963276 | Msa0453530:CDS |
| GGCTTAATACCTGGAACCGT+TGG | 0.379736 | 3_3:-43968307 | Msa0453530:CDS |
| TAAATGCTATAACATACAAC+AGG | 0.380991 | 3_3:+43962599 | None:intergenic |
| TGTTCTTTCACTGACTGAAT+AGG | 0.383128 | 3_3:+43962706 | None:intergenic |
| GCAAGCCGTTTAGTCTTTCC+GGG | 0.383537 | 3_3:-43970433 | Msa0453530:CDS |
| ATGAGCAGGTGAGACAATTT+CGG | 0.384893 | 3_3:+43971532 | None:intergenic |
| TTGTAGGCACTATTCTAGTT+TGG | 0.388126 | 3_3:-43965620 | Msa0453530:intron |
| TGACGGAGGAGGAGGGAAGT+AGG | 0.389588 | 3_3:+43971466 | None:intergenic |
| AATTCCACCACCAACTGTTA+AGG | 0.389641 | 3_3:+43965810 | None:intergenic |
| GCACGAATAGAGAAATTTGT+TGG | 0.392785 | 3_3:+43971391 | None:intergenic |
| GGGAATGTGGTGAAGGAGAG+TGG | 0.392933 | 3_3:+43971436 | None:intergenic |
| GCCGAAGAATATTTAAGAAC+TGG | 0.400430 | 3_3:-43965529 | Msa0453530:CDS |
| ATCAAGAGTTTATGGGAATC+AGG | 0.400872 | 3_3:-43965390 | Msa0453530:intron |
| AGTCAGATGATAACAAAGAT+TGG | 0.402053 | 3_3:-43968036 | Msa0453530:CDS |
| TCCAGTTCTTAAATATTCTT+CGG | 0.405621 | 3_3:+43965528 | None:intergenic |
| CGTTTAGTCTTTCCGGGTGT+TGG | 0.410647 | 3_3:-43970427 | Msa0453530:CDS |
| AGCAGATATCAAGAGTTTAT+GGG | 0.415550 | 3_3:-43965397 | Msa0453530:CDS |
| GGGCGATTTGATTCATCAAA+TGG | 0.418537 | 3_3:-43968286 | Msa0453530:CDS |
| GGGCGAGAAGGTCGGCCAAT+TGG | 0.418619 | 3_3:-43963801 | Msa0453530:CDS |
| ACTTTGCTTGATTATGGTGC+TGG | 0.429957 | 3_3:-43971244 | Msa0453530:CDS |
| AATATTTCAGGTCAAGGAAA+AGG | 0.432664 | 3_3:-43963411 | Msa0453530:intron |
| ATGTGAGAGCAAATGATAAC+GGG | 0.433994 | 3_3:-43966447 | Msa0453530:CDS |
| TGTGAATCAGTAAAAGGTCT+TGG | 0.438970 | 3_3:-43968328 | Msa0453530:intron |
| GACTTGAAACCTTTATGGTC+TGG | 0.439140 | 3_3:+43965036 | None:intergenic |
| TATCATGTATATCTGAACTT+TGG | 0.440063 | 3_3:-43962453 | Msa0453530:three_prime_UTR |
| AAAGAACATTTGTTGAATGA+AGG | 0.442586 | 3_3:-43962691 | Msa0453530:CDS |
| GCCAATTGGTGCTTATGAAC+TGG | 0.444377 | 3_3:-43963787 | Msa0453530:CDS |
| GCCAGTTCATAAGCACCAAT+TGG | 0.446504 | 3_3:+43963786 | None:intergenic |
| TGTGCAATTCCAGACCATAA+AGG | 0.449736 | 3_3:-43965045 | Msa0453530:CDS |
| GCTTAATACCTGGAACCGTT+GGG | 0.450798 | 3_3:-43968306 | Msa0453530:CDS |
| TTTGAATCTAGTGAAGAGAA+TGG | 0.454583 | 3_3:-43969465 | Msa0453530:CDS |
| ATTCCACCACCAACTGTTAA+GGG | 0.455305 | 3_3:+43965811 | None:intergenic |
| AACTTGCCTCCACTCTTCTC+TGG | 0.455883 | 3_3:+43967935 | None:intergenic |
| TAGCAGCTGAAATGGGAGAT+TGG | 0.457211 | 3_3:+43971563 | None:intergenic |
| ATTTCACAAACCTGCAACAT+TGG | 0.459350 | 3_3:+43965962 | None:intergenic |
| GGATTTCGCGACTTCCCTCT+TGG | 0.461948 | 3_3:-43965992 | Msa0453530:CDS |
| CACGAATAGAGAAATTTGTT+GGG | 0.466951 | 3_3:+43971392 | None:intergenic |
| GGGGAGTATGACGGTGTTAA+CGG | 0.468690 | 3_3:+43971487 | None:intergenic |
| ACGGAGGAGGAGGGAAGTAG+GGG | 0.473445 | 3_3:+43971468 | None:intergenic |
| GTCAGATGATAACAAAGATT+GGG | 0.473806 | 3_3:-43968035 | Msa0453530:CDS |
| CAACACCCGGAAAGACTAAA+CGG | 0.475323 | 3_3:+43970428 | None:intergenic |
| TGGAGCATTTGCACCTGCTA+TGG | 0.478787 | 3_3:-43970407 | Msa0453530:CDS |
| TTTCTGTGACTCTTTGGTAC+AGG | 0.478905 | 3_3:-43962486 | Msa0453530:three_prime_UTR |
| CCATTGTTTGTTGAATGAGC+AGG | 0.482039 | 3_3:+43971518 | None:intergenic |
| GTGATTGCAAGCAGTGGTGC+TGG | 0.483155 | 3_3:-43963339 | Msa0453530:CDS |
| GCACCACTGCTTGCAATCAC+AGG | 0.490093 | 3_3:+43963342 | None:intergenic |
| ACCATAAAGGTTTCAAGTCC+AGG | 0.495379 | 3_3:-43965032 | Msa0453530:intron |
| TTACTTAACACCTCCATAGC+AGG | 0.499119 | 3_3:+43970394 | None:intergenic |
| ATGTTGGTTTCAGGTCCAAA+TGG | 0.500156 | 3_3:-43964717 | Msa0453530:intron |
| GTCGCTTTAGCAGCTGAAAT+GGG | 0.501157 | 3_3:+43971556 | None:intergenic |
| TAATAAGTAAAGTTCAGATT+CGG | 0.508922 | 3_3:+43962659 | None:intergenic |
| GCAAAAGCTGTTGAAGAACT+TGG | 0.512212 | 3_3:-43963765 | Msa0453530:CDS |
| ACTTTGTTCATATATTGAAA+AGG | 0.512500 | 3_3:-43969529 | Msa0453530:CDS |
| TTGTTAGTATCGATCCCCGT+AGG | 0.517591 | 3_3:-43965091 | Msa0453530:CDS |
| TGTCTATTGTAAGGTTAATG+GGG | 0.517752 | 3_3:-43963823 | Msa0453530:intron |
| TCTTGATATCTGCTCTAAGC+TGG | 0.517936 | 3_3:+43965406 | None:intergenic |
| ATTGTTTACGTAAACCCTAC+GGG | 0.519871 | 3_3:+43965076 | None:intergenic |
| TTTATAGCATCTATTAGAAG+AGG | 0.520060 | 3_3:-43967983 | Msa0453530:CDS |
| TGCATTCAAAATGTCTTCTG+GGG | 0.522038 | 3_3:+43970453 | None:intergenic |
| GTCTATTGTAAGGTTAATGG+GGG | 0.526228 | 3_3:-43963822 | Msa0453530:intron |
| AAAGGTCTTGGCTTAATACC+TGG | 0.537060 | 3_3:-43968316 | Msa0453530:CDS |
| GATGTGAGAGCAAATGATAA+CGG | 0.543465 | 3_3:-43966448 | Msa0453530:CDS |
| TTTGTGCCCTTAACAGTTGG+TGG | 0.544092 | 3_3:-43965817 | Msa0453530:CDS |
| TTAGAGTACCGCATATTGGA+TGG | 0.544443 | 3_3:-43968261 | Msa0453530:CDS |
| GATTGTTTACGTAAACCCTA+CGG | 0.545532 | 3_3:+43965075 | None:intergenic |
| GTGCCCTTAACAGTTGGTGG+TGG | 0.545974 | 3_3:-43965814 | Msa0453530:CDS |
| AGGGAAGTAGGGGAGTATGA+CGG | 0.550673 | 3_3:+43971478 | None:intergenic |
| ATCACCATAGTCACAGGTGG+AGG | 0.551749 | 3_3:+43968009 | None:intergenic |
| TGCCTCCACTCTTCTCTGGA+TGG | 0.552179 | 3_3:+43967939 | None:intergenic |
| GGGGCTGACAAAATATCCAT+TGG | 0.553195 | 3_3:-43965571 | Msa0453530:CDS |
| TTCACTTGAAGACAGAAGAC+TGG | 0.555655 | 3_3:-43966624 | Msa0453530:intron |
| TGTTAGTATCGATCCCCGTA+GGG | 0.556071 | 3_3:-43965090 | Msa0453530:CDS |
| CAAATGGAGAAGAATATGCC+TGG | 0.568451 | 3_3:-43964701 | Msa0453530:CDS |
| GGAATGTGGTGAAGGAGAGT+GGG | 0.569025 | 3_3:+43971437 | None:intergenic |
| GCTGTTGAAGAACTTGGTGC+TGG | 0.569160 | 3_3:-43963759 | Msa0453530:CDS |
| AAATTTATCACCATAGTCAC+AGG | 0.577451 | 3_3:+43968003 | None:intergenic |
| AGAAAACAAACCAGAATCAG+TGG | 0.580544 | 3_3:+43971354 | None:intergenic |
| TTAAATTGCATCGATTGTGA+TGG | 0.580609 | 3_3:-43963726 | Msa0453530:intron |
| CCTGCTCATTCAACAAACAA+TGG | 0.582081 | 3_3:-43971518 | Msa0453530:exon |
| GGTGCAAATGCTCCAACACC+CGG | 0.584926 | 3_3:+43970415 | None:intergenic |
| ATAAACTGCATCACTTCCAA+TGG | 0.593439 | 3_3:+43965555 | None:intergenic |
| AGCATTTGCACCTGCTATGG+AGG | 0.600749 | 3_3:-43970404 | Msa0453530:CDS |
| TGAAGACAGAAGACTGGTGA+GGG | 0.601339 | 3_3:-43966618 | Msa0453530:intron |
| CACCACTGCTTGCAATCACA+GGG | 0.603304 | 3_3:+43963343 | None:intergenic |
| TTCCATCCAGAGAAGAGTGG+AGG | 0.630317 | 3_3:-43967941 | Msa0453530:CDS |
| TGGAGGTGTTAAGTAAAACT+GGG | 0.630651 | 3_3:-43970387 | Msa0453530:intron |
| CAGTTCCATCCAGAGAAGAG+TGG | 0.632189 | 3_3:-43967944 | Msa0453530:CDS |
| GGGGACCTTGTTGTAACCAA+AGG | 0.634870 | 3_3:-43966427 | Msa0453530:CDS |
| TGATGAATCAAATCGCCCAA+CGG | 0.639501 | 3_3:+43968291 | None:intergenic |
| ATTGCGAGAGCGTGGGAATG+TGG | 0.641916 | 3_3:+43971423 | None:intergenic |
| TTTATCACCATAGTCACAGG+TGG | 0.649989 | 3_3:+43968006 | None:intergenic |
| AATGCCAGCAGCAAGTGCAG+CGG | 0.655966 | 3_3:+43963272 | None:intergenic |
| AAAGTGGAAACATACAGGCA+TGG | 0.656500 | 3_3:+43968156 | None:intergenic |
| AAATGCTATAACATACAACA+GGG | 0.660990 | 3_3:+43962600 | None:intergenic |
| ACTTACTGTACACTGATACC+AGG | 0.662371 | 3_3:+43964683 | None:intergenic |
| AGAGCGTGGGAATGTGGTGA+AGG | 0.665922 | 3_3:+43971429 | None:intergenic |
| TTGAAGACAGAAGACTGGTG+AGG | 0.665952 | 3_3:-43966619 | Msa0453530:intron |
| GGAAACATACAGGCATGGCA+CGG | 0.671224 | 3_3:+43968161 | None:intergenic |
| GAATGCTTTACAAATCACAA+AGG | 0.672945 | 3_3:-43968239 | Msa0453530:CDS |
| GATGATATGATAATGACGCA+TGG | 0.677416 | 3_3:-43962422 | None:intergenic |
| ATCCCTGTGATTGCAAGCAG+TGG | 0.678062 | 3_3:-43963345 | Msa0453530:CDS |
| TCTATTGTAAGGTTAATGGG+GGG | 0.682944 | 3_3:-43963821 | Msa0453530:intron |
| GGTCTCCTTTGGTTACAACA+AGG | 0.685716 | 3_3:+43966422 | None:intergenic |
| AAGAGTGCACAAAATAGACA+TGG | 0.690237 | 3_3:+43968185 | None:intergenic |
| AAAGCATTCCATCCAATATG+CGG | 0.691077 | 3_3:+43968253 | None:intergenic |
| AGAAAATACAAAAGAGAACG+AGG | 0.696026 | 3_3:-43966386 | Msa0453530:intron |
| GCTCATTCAACAAACAATGG+AGG | 0.697116 | 3_3:-43971515 | Msa0453530:exon |
| AGTGCACAAAATAGACATGG+TGG | 0.705001 | 3_3:+43968188 | None:intergenic |
| ACATTGGTAGATCACCAAGA+GGG | 0.715055 | 3_3:+43965978 | None:intergenic |
| TTGTTTACGTAAACCCTACG+GGG | 0.718532 | 3_3:+43965077 | None:intergenic |
| GAGTATGACGGTGTTAACGG+CGG | 0.720961 | 3_3:+43971490 | None:intergenic |
| AACATTGGTAGATCACCAAG+AGG | 0.723729 | 3_3:+43965977 | None:intergenic |
| TGTGAGAGCAAATGATAACG+GGG | 0.744026 | 3_3:-43966446 | Msa0453530:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAACTATTTTTTTCAAAA+GGG | + | chr3_3:43962700-43962719 | None:intergenic | 10.0% |
| !!! | AAAAAACTATTTTTTTCAAA+AGG | + | chr3_3:43962701-43962720 | None:intergenic | 10.0% |
| !!! | TGATTATGAATATTTTAATA+AGG | - | chr3_3:43963002-43963021 | Msa0453530:intron | 10.0% |
| !!! | TATTTCATTAATTTTAATCA+AGG | - | chr3_3:43965594-43965613 | Msa0453530:CDS | 10.0% |
| !! | AATTATTCTTTCAAATTAAA+GGG | + | chr3_3:43966919-43966938 | None:intergenic | 10.0% |
| !! | AAATTAGTTAAAATTAGAAA+GGG | + | chr3_3:43967465-43967484 | None:intergenic | 10.0% |
| !! | TAAATTAGTTAAAATTAGAA+AGG | + | chr3_3:43967466-43967485 | None:intergenic | 10.0% |
| !! | CATAAAATTTACAATATTTA+GGG | - | chr3_3:43967678-43967697 | Msa0453530:intron | 10.0% |
| !! | ATAAAATTTACAATATTTAG+GGG | - | chr3_3:43967679-43967698 | Msa0453530:intron | 10.0% |
| !!! | GAATTTTATCTAATATTTAT+TGG | - | chr3_3:43968119-43968138 | Msa0453530:intron | 10.0% |
| !! | TTAAAATATTCATAATCACA+AGG | + | chr3_3:43963000-43963019 | None:intergenic | 15.0% |
| !! | AATAAATTGAGAAGAAAAAA+AGG | + | chr3_3:43963669-43963688 | None:intergenic | 15.0% |
| !! | TGAATGATAAAATATAACAT+TGG | + | chr3_3:43964414-43964433 | None:intergenic | 15.0% |
| !! | AACAACAATAATAATAAAAG+AGG | + | chr3_3:43964588-43964607 | None:intergenic | 15.0% |
| !!! | ATTTGAAAGATTTTTCATTT+AGG | - | chr3_3:43964820-43964839 | Msa0453530:intron | 15.0% |
| !!! | TTTTTTTATAGTGAGAATAT+TGG | - | chr3_3:43965356-43965375 | Msa0453530:intron | 15.0% |
| !! | AATCATTATATCACAATAAA+TGG | + | chr3_3:43965518-43965537 | None:intergenic | 15.0% |
| !! | AAATAATAAAACTGAAGAAT+CGG | - | chr3_3:43966536-43966555 | Msa0453530:intron | 15.0% |
| !!! | AGTTTTTCTATTTTACAAAT+AGG | + | chr3_3:43966580-43966599 | None:intergenic | 15.0% |
| !! | CAATTATTCTTTCAAATTAA+AGG | + | chr3_3:43966920-43966939 | None:intergenic | 15.0% |
| !! | TAATTTGAAAGAATAATTGA+AGG | - | chr3_3:43966921-43966940 | Msa0453530:intron | 15.0% |
| !!! | CCTAAATATTGTAAATTTTA+TGG | + | chr3_3:43967680-43967699 | None:intergenic | 15.0% |
| !! | CCATAAAATTTACAATATTT+AGG | - | chr3_3:43967677-43967696 | Msa0453530:intron | 15.0% |
| !! | TATAAATGGAAACTATTATT+TGG | - | chr3_3:43967727-43967746 | Msa0453530:intron | 15.0% |
| !! | AAAATTAAAAATCAGCATTT+GGG | + | chr3_3:43968082-43968101 | None:intergenic | 15.0% |
| !! | AAAAATTAAAAATCAGCATT+TGG | + | chr3_3:43968083-43968102 | None:intergenic | 15.0% |
| !! | ATGTATCTCATTAATTATTA+AGG | + | chr3_3:43969077-43969096 | None:intergenic | 15.0% |
| !! | TAATAATTAATGAGATACAT+AGG | - | chr3_3:43969077-43969096 | Msa0453530:intron | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | + | chr3_3:43969784-43969803 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | - | chr3_3:43969783-43969802 | Msa0453530:intron | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | - | chr3_3:43969807-43969826 | Msa0453530:intron | 15.0% |
| !!! | CATTTTGAAACAATTTTTTT+TGG | - | chr3_3:43969910-43969929 | Msa0453530:intron | 15.0% |
| !!! | TTTACGATATATATTTTCAA+TGG | + | chr3_3:43970003-43970022 | None:intergenic | 15.0% |
| !! | TGAAAATATATATCGTAAAT+TGG | - | chr3_3:43970004-43970023 | Msa0453530:intron | 15.0% |
| !!! | AAGATTTAAAGTTGTTTAAA+TGG | + | chr3_3:43971111-43971130 | None:intergenic | 15.0% |
| !!! | TTTATTTGTTAATGTGTGTT+TGG | - | chr3_3:43962862-43962881 | Msa0453530:intron | 20.0% |
| !! | TTGAAATATTCAAAATCACA+GGG | + | chr3_3:43963105-43963124 | None:intergenic | 20.0% |
| !!! | TTTGAAATATTCAAAATCAC+AGG | + | chr3_3:43963106-43963125 | None:intergenic | 20.0% |
| !!! | GTGATTTTGAATATTTCAAA+AGG | - | chr3_3:43963106-43963125 | Msa0453530:intron | 20.0% |
| !! | TGAGTAAAATTTAACAAAGT+CGG | + | chr3_3:43963135-43963154 | None:intergenic | 20.0% |
| !!! | GATACATAATTGATAGTAAA+TGG | - | chr3_3:43963217-43963236 | Msa0453530:intron | 20.0% |
| !! | ATAGTAAATGGTTAAATACA+GGG | - | chr3_3:43963229-43963248 | Msa0453530:intron | 20.0% |
| !! | TTGACAATTTAATAGAGTTT+GGG | - | chr3_3:43963258-43963277 | Msa0453530:CDS | 20.0% |
| !! | AAAATTGATTACAACATGTT+TGG | + | chr3_3:43963437-43963456 | None:intergenic | 20.0% |
| !!! | TGTAATCAATTTTATGTTTC+TGG | - | chr3_3:43963444-43963463 | Msa0453530:intron | 20.0% |
| !! | TTATTAAAAACACTGTCTAT+TGG | - | chr3_3:43963917-43963936 | Msa0453530:intron | 20.0% |
| !! | TGTAAATTACAACACATAAT+AGG | + | chr3_3:43964081-43964100 | None:intergenic | 20.0% |
| !! | ACTTTGTTCATATATTGAAA+AGG | - | chr3_3:43964486-43964505 | Msa0453530:intron | 20.0% |
| !!! | TTTTAGTATTATGGCATAAA+TGG | - | chr3_3:43964676-43964695 | Msa0453530:intron | 20.0% |
| !!! | TAAATTTTATCCATTTGAAC+TGG | + | chr3_3:43964846-43964865 | None:intergenic | 20.0% |
| !! | CAAAATAGTTTGATCTAAAT+TGG | - | chr3_3:43965387-43965406 | Msa0453530:intron | 20.0% |
| !! | TAAAATAAGTAAAAAAAGCC+CGG | - | chr3_3:43965426-43965445 | Msa0453530:intron | 20.0% |
| !!! | AAAATTTTAATATCAAAGCC+GGG | + | chr3_3:43965447-43965466 | None:intergenic | 20.0% |
| !!! | CAAAATTTTAATATCAAAGC+CGG | + | chr3_3:43965448-43965467 | None:intergenic | 20.0% |
| !! | AAAATACCAAAAAACTAGAT+TGG | + | chr3_3:43966118-43966137 | None:intergenic | 20.0% |
| !!! | CTTATTTCTGTTTTTTCTTA+AGG | - | chr3_3:43966139-43966158 | Msa0453530:intron | 20.0% |
| !! | AAAACACATTCTACTAAAAT+TGG | + | chr3_3:43966220-43966239 | None:intergenic | 20.0% |
| !!! | TTTTAGTAGAATGTGTTTTA+TGG | - | chr3_3:43966221-43966240 | Msa0453530:intron | 20.0% |
| !! | TTTGTAAAATAGAAAAACTG+AGG | - | chr3_3:43966581-43966600 | Msa0453530:intron | 20.0% |
| !! | TATTTCACATAGTAGATATT+TGG | - | chr3_3:43966760-43966779 | Msa0453530:intron | 20.0% |
| !!! | ATTATGATCATTTTGACTTA+TGG | - | chr3_3:43967349-43967368 | Msa0453530:intron | 20.0% |
| !!! | ATGATACTGTTTTAATTTTC+AGG | - | chr3_3:43967833-43967852 | Msa0453530:intron | 20.0% |
| !!! | TACATTAATTTGAATGAACA+CGG | + | chr3_3:43968776-43968795 | None:intergenic | 20.0% |
| !! | CCTTCAAATTGAAAATAAAT+TGG | + | chr3_3:43968898-43968917 | None:intergenic | 20.0% |
| !!! | CCAATTTATTTTCAATTTGA+AGG | - | chr3_3:43968895-43968914 | Msa0453530:intron | 20.0% |
| !! | TACACAAAAATATTAAAAGC+AGG | + | chr3_3:43969029-43969048 | None:intergenic | 20.0% |
| !! | TTTGTGTAAGTTATCTAAAT+TGG | - | chr3_3:43969041-43969060 | Msa0453530:intron | 20.0% |
| !! | TCTAGGGAATAAAAATATTA+AGG | - | chr3_3:43969548-43969567 | Msa0453530:intron | 20.0% |
| !! | AATGATTAAAAGAAAGAGAA+TGG | - | chr3_3:43969750-43969769 | Msa0453530:intron | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | + | chr3_3:43969793-43969812 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr3_3:43969870-43969889 | Msa0453530:intron | 20.0% |
| !! | AGCAATAATATTTCAAAATG+AGG | + | chr3_3:43970045-43970064 | None:intergenic | 20.0% |
| !! | TATTATTGCTTAACAAGAAT+TGG | - | chr3_3:43970055-43970074 | Msa0453530:intron | 20.0% |
| !!! | TTTATTTTCATTATATCCCT+TGG | + | chr3_3:43970123-43970142 | None:intergenic | 20.0% |
| !!! | AAAATATTCATTGATGATGA+TGG | + | chr3_3:43970412-43970431 | None:intergenic | 20.0% |
| !!! | ATTGTTGTTATCAATATTTC+AGG | - | chr3_3:43970592-43970611 | Msa0453530:intron | 20.0% |
| !!! | TTTATTTATTTCTTATTGCG+AGG | - | chr3_3:43970794-43970813 | Msa0453530:intron | 20.0% |
| !!! | TTATTTATTTCTTATTGCGA+GGG | - | chr3_3:43970795-43970814 | Msa0453530:intron | 20.0% |
| !!! | ATTCCATTAATAAGCTTTAA+GGG | - | chr3_3:43970934-43970953 | Msa0453530:intron | 20.0% |
| !! | TTAATTCAAAGATGTTATTG+AGG | - | chr3_3:43971253-43971272 | Msa0453530:intron | 20.0% |
| !! | TAATAAGTAAAGTTCAGATT+CGG | + | chr3_3:43971359-43971378 | None:intergenic | 20.0% |
| !!! | AGAAATTTTGTAAAAGCAAA+TGG | + | chr3_3:43971514-43971533 | None:intergenic | 20.0% |
| !! | GATTTGAAATCAAAGATGTA+AGG | - | chr3_3:43962832-43962851 | Msa0453530:intron | 25.0% |
| ! | CTAAATTGATTGATTGTAAG+TGG | - | chr3_3:43963184-43963203 | Msa0453530:intron | 25.0% |
| ! | GATAGTAAATGGTTAAATAC+AGG | - | chr3_3:43963228-43963247 | Msa0453530:intron | 25.0% |
| ! | CTTGACAATTTAATAGAGTT+TGG | - | chr3_3:43963257-43963276 | Msa0453530:CDS | 25.0% |
| !!! | TATGTTTCTGGAAACAATTT+TGG | - | chr3_3:43963456-43963475 | Msa0453530:intron | 25.0% |
| ! | TATGTACATTAAGAATGAGT+TGG | - | chr3_3:43964046-43964065 | Msa0453530:intron | 25.0% |
| !!! | ATGGTATGGTATTGAATTTT+TGG | - | chr3_3:43964123-43964142 | Msa0453530:intron | 25.0% |
| !!! | TGGTATGGTATTGAATTTTT+GGG | - | chr3_3:43964124-43964143 | Msa0453530:intron | 25.0% |
| !!! | GAGACATTGTTTTATTTGAA+CGG | + | chr3_3:43964256-43964275 | None:intergenic | 25.0% |
| ! | ATTTATGCTGAATTTACTCT+AGG | - | chr3_3:43964294-43964313 | Msa0453530:intron | 25.0% |
| !! | CGTTTATACTCTTAAGTTTT+AGG | - | chr3_3:43964374-43964393 | Msa0453530:intron | 25.0% |
| !!! | CTCTCAACATTTTAGTATTA+TGG | - | chr3_3:43964667-43964686 | Msa0453530:intron | 25.0% |
| ! | TATAATCAGTTCATGAATCT+GGG | - | chr3_3:43964945-43964964 | Msa0453530:intron | 25.0% |
| ! | GATCAATCTGATTAAGAAAT+GGG | - | chr3_3:43964967-43964986 | Msa0453530:intron | 25.0% |
| !!! | TAGGATTATTTTAAGCTAGT+TGG | - | chr3_3:43965010-43965029 | Msa0453530:intron | 25.0% |
| !!! | TTATTTTGATAGAGTCCAAT+GGG | - | chr3_3:43965468-43965487 | Msa0453530:intron | 25.0% |
| ! | GAATTCTTTAAGTACATGTT+TGG | - | chr3_3:43965542-43965561 | Msa0453530:CDS | 25.0% |
| ! | ATTCACATTCTTTGTCTTTA+TGG | - | chr3_3:43965916-43965935 | Msa0453530:intron | 25.0% |
| ! | TTTATAGCATCTATTAGAAG+AGG | - | chr3_3:43966032-43966051 | Msa0453530:intron | 25.0% |
| !! | ATATTCAGTGTTATCGATTA+CGG | + | chr3_3:43966282-43966301 | None:intergenic | 25.0% |
| ! | ATAAACTTCAATAACGATTG+CGG | + | chr3_3:43966327-43966346 | None:intergenic | 25.0% |
| !! | TTTTACAAATAGGTCCTATT+TGG | + | chr3_3:43966570-43966589 | None:intergenic | 25.0% |
| ! | ACTATAGCTTACATATTGAA+AGG | + | chr3_3:43966653-43966672 | None:intergenic | 25.0% |
| ! | AATAATTGAAGGATGATCTT+AGG | - | chr3_3:43966932-43966951 | Msa0453530:intron | 25.0% |
| !!! | TCTTAGGTTCTAAATTAACT+TGG | - | chr3_3:43966948-43966967 | Msa0453530:intron | 25.0% |
| ! | GAAAAAAAGTGAAATGAAAG+CGG | - | chr3_3:43966970-43966989 | Msa0453530:intron | 25.0% |
| ! | AAAAAAAGTGAAATGAAAGC+GGG | - | chr3_3:43966971-43966990 | Msa0453530:intron | 25.0% |
| ! | TTCATAAGATGTTCATAGAA+AGG | + | chr3_3:43967321-43967340 | None:intergenic | 25.0% |
| ! | AAATAACGAAAACATTGAAG+AGG | + | chr3_3:43967502-43967521 | None:intergenic | 25.0% |
| !! | TATTTTCTCTTACATCATAC+TGG | + | chr3_3:43967617-43967636 | None:intergenic | 25.0% |
| ! | AGCATATGTCAAGATATAAA+TGG | - | chr3_3:43967713-43967732 | Msa0453530:intron | 25.0% |
| ! | ATGGAAACTATTATTTGGTT+TGG | - | chr3_3:43967732-43967751 | Msa0453530:intron | 25.0% |
| !!! | ACTGTTTTAATTTTCAGGTT+AGG | - | chr3_3:43967838-43967857 | Msa0453530:intron | 25.0% |
| ! | TAATAACACCTTTGACAATT+TGG | - | chr3_3:43967919-43967938 | Msa0453530:intron | 25.0% |
| ! | ACATCTCTAATTTGGTATAA+AGG | + | chr3_3:43968273-43968292 | None:intergenic | 25.0% |
| ! | TAAAAGCGGACAATTTAAAT+TGG | + | chr3_3:43968315-43968334 | None:intergenic | 25.0% |
| ! | TCCAGTTCTTAAATATTCTT+CGG | + | chr3_3:43968490-43968509 | None:intergenic | 25.0% |
| ! | AATATTTAAGAACTGGAGTA+TGG | - | chr3_3:43968493-43968512 | Msa0453530:intron | 25.0% |
| ! | TATCATTAGAAACAAGCAAT+AGG | + | chr3_3:43968526-43968545 | None:intergenic | 25.0% |
| ! | ACTTGTATTTACATGGATAA+GGG | + | chr3_3:43968692-43968711 | None:intergenic | 25.0% |
| ! | TACTTGTATTTACATGGATA+AGG | + | chr3_3:43968693-43968712 | None:intergenic | 25.0% |
| ! | ATCAAGTACTTGTATTTACA+TGG | + | chr3_3:43968699-43968718 | None:intergenic | 25.0% |
| ! | TCATTACATCAAGTATCAAA+TGG | + | chr3_3:43968860-43968879 | None:intergenic | 25.0% |
| ! | ATATTAAAAGCAGGAAGAAA+TGG | + | chr3_3:43969020-43969039 | None:intergenic | 25.0% |
| ! | AGAGAATATAATACATCCAT+AGG | + | chr3_3:43969183-43969202 | None:intergenic | 25.0% |
| ! | ACTCAAAAACAACTTTATGT+TGG | - | chr3_3:43969282-43969301 | Msa0453530:intron | 25.0% |
| ! | CTAGCAATGTCTATTTATAA+CGG | + | chr3_3:43969443-43969462 | None:intergenic | 25.0% |
| ! | TTATAAATAGACATTGCTAG+AGG | - | chr3_3:43969443-43969462 | Msa0453530:intron | 25.0% |
| ! | TATAAATAGACATTGCTAGA+GGG | - | chr3_3:43969444-43969463 | Msa0453530:intron | 25.0% |
| ! | ATGTCCAATGTAAAAAATAG+AGG | - | chr3_3:43969571-43969590 | Msa0453530:intron | 25.0% |
| !!! | GAAACCTCTATTTTTTACAT+TGG | + | chr3_3:43969578-43969597 | None:intergenic | 25.0% |
| !! | TACTTCTTTTGTCTATTGTA+AGG | - | chr3_3:43970183-43970202 | Msa0453530:intron | 25.0% |
| ! | TTTGTCTATTGTAAGGTTAA+TGG | - | chr3_3:43970190-43970209 | Msa0453530:intron | 25.0% |
| ! | TTGTCTATTGTAAGGTTAAT+GGG | - | chr3_3:43970191-43970210 | Msa0453530:intron | 25.0% |
| ! | CTTATCAAAACAGTAAAATC+AGG | + | chr3_3:43970336-43970355 | None:intergenic | 25.0% |
| !!! | CTGATTTTACTGTTTTGATA+AGG | - | chr3_3:43970334-43970353 | Msa0453530:intron | 25.0% |
| ! | AGAAAGAATGACAAGTATAA+AGG | + | chr3_3:43970557-43970576 | None:intergenic | 25.0% |
| !!! | ATTTGTTTTAGTGAACACAT+CGG | + | chr3_3:43970719-43970738 | None:intergenic | 25.0% |
| !! | TATTTATTTCTTATTGCGAG+GGG | - | chr3_3:43970796-43970815 | Msa0453530:intron | 25.0% |
| ! | TTAAATTGACACCAAAAAGA+AGG | + | chr3_3:43970897-43970916 | None:intergenic | 25.0% |
| ! | CATTCCATTAATAAGCTTTA+AGG | - | chr3_3:43970933-43970952 | Msa0453530:intron | 25.0% |
| ! | TTTCCCTTAAAGCTTATTAA+TGG | + | chr3_3:43970940-43970959 | None:intergenic | 25.0% |
| ! | TATATCTTGACCATCTATAT+AGG | - | chr3_3:43971171-43971190 | Msa0453530:intron | 25.0% |
| ! | ATATCTTGACCATCTATATA+GGG | - | chr3_3:43971172-43971191 | Msa0453530:intron | 25.0% |
| !! | AAAGAACATTTGTTGAATGA+AGG | - | chr3_3:43971324-43971343 | Msa0453530:intron | 25.0% |
| ! | AAATGCTATAACATACAACA+GGG | + | chr3_3:43971418-43971437 | None:intergenic | 25.0% |
| ! | TAAATGCTATAACATACAAC+AGG | + | chr3_3:43971419-43971438 | None:intergenic | 25.0% |
| ! | TTGTAAAAGCAAATGGTAAA+AGG | + | chr3_3:43971507-43971526 | None:intergenic | 25.0% |
| ! | TATCATGTATATCTGAACTT+TGG | - | chr3_3:43971562-43971581 | Msa0453530:five_prime_UTR | 25.0% |
| ! | CACGAATAGAGAAATTTGTT+GGG | + | chr3_3:43962626-43962645 | None:intergenic | 30.0% |
| ! | CATCTTTGATTTCAAATCCA+AGG | + | chr3_3:43962830-43962849 | None:intergenic | 30.0% |
| AGTAAACCACTAAATTAGTC+CGG | - | chr3_3:43962958-43962977 | Msa0453530:intron | 30.0% | |
| AGGTCTTTACTTTGTCATAT+TGG | - | chr3_3:43963022-43963041 | Msa0453530:intron | 30.0% | |
| TCATATTGGACTCATATTAG+TGG | - | chr3_3:43963036-43963055 | Msa0453530:intron | 30.0% | |
| ! | TAATAGAGTTTGGGATCTTT+CGG | - | chr3_3:43963267-43963286 | Msa0453530:CDS | 30.0% |
| AAATTAGTCCTTAACGTTGT+AGG | + | chr3_3:43963329-43963348 | None:intergenic | 30.0% | |
| TACAACGTTAAGGACTAATT+TGG | - | chr3_3:43963328-43963347 | Msa0453530:CDS | 30.0% | |
| CAAAAACTAGAAGTCAATTC+TGG | - | chr3_3:43963383-43963402 | Msa0453530:CDS | 30.0% | |
| TAAAAAACAACCCATTCGTT+TGG | + | chr3_3:43963497-43963516 | None:intergenic | 30.0% | |
| TTGAAACAACTGTACTTGAT+AGG | - | chr3_3:43963533-43963552 | Msa0453530:intron | 30.0% | |
| TTGCATTCAAAATGTCTTCT+GGG | + | chr3_3:43963566-43963585 | None:intergenic | 30.0% | |
| TGTGACTCTCTATTATATCA+GGG | + | chr3_3:43963800-43963819 | None:intergenic | 30.0% | |
| GTCTATTGGATTAAAGTAGT+AGG | - | chr3_3:43963931-43963950 | Msa0453530:intron | 30.0% | |
| TTAAAGTAGTAGGTTTGTGA+AGG | - | chr3_3:43963941-43963960 | Msa0453530:intron | 30.0% | |
| AGTGAAGATTAACATTTGTG+TGG | + | chr3_3:43964001-43964020 | None:intergenic | 30.0% | |
| ACTGTACTAATTTCTAAGCA+TGG | - | chr3_3:43964104-43964123 | Msa0453530:intron | 30.0% | |
| ACTAATTTCTAAGCATGGTA+TGG | - | chr3_3:43964109-43964128 | Msa0453530:intron | 30.0% | |
| !! | GGTATGGTATTGAATTTTTG+GGG | - | chr3_3:43964125-43964144 | Msa0453530:intron | 30.0% |
| !! | TTGAATTTTTGGGGATAATC+AGG | - | chr3_3:43964134-43964153 | Msa0453530:intron | 30.0% |
| ! | AATTTACTCTAGGCATTGTT+AGG | - | chr3_3:43964304-43964323 | Msa0453530:intron | 30.0% |
| CAAGACAAATGCCTAAAAAT+GGG | + | chr3_3:43964516-43964535 | None:intergenic | 30.0% | |
| TTTGAATCTAGTGAAGAGAA+TGG | - | chr3_3:43964550-43964569 | Msa0453530:intron | 30.0% | |
| TAATAAAAGAGGAACTGACT+TGG | + | chr3_3:43964577-43964596 | None:intergenic | 30.0% | |
| AATGTTGAGAGAGTAGTTAA+AGG | + | chr3_3:43964658-43964677 | None:intergenic | 30.0% | |
| CAGATTCATGAACTGATTAT+AGG | + | chr3_3:43964946-43964965 | None:intergenic | 30.0% | |
| CTATAATCAGTTCATGAATC+TGG | - | chr3_3:43964944-43964963 | Msa0453530:intron | 30.0% | |
| GGATCAATCTGATTAAGAAA+TGG | - | chr3_3:43964966-43964985 | Msa0453530:intron | 30.0% | |
| ! | AACTTCGATTTGAAGACAAT+TGG | + | chr3_3:43965072-43965091 | None:intergenic | 30.0% |
| CGAAGTTAGTGAAATTATAG+CGG | - | chr3_3:43965085-43965104 | Msa0453530:CDS | 30.0% | |
| ATGGTCCAGTAATGAATATT+GGG | - | chr3_3:43965139-43965158 | Msa0453530:intron | 30.0% | |
| ACTTTCCCAATATTCATTAC+TGG | + | chr3_3:43965147-43965166 | None:intergenic | 30.0% | |
| GTTTACTCATATGAGTAATG+AGG | - | chr3_3:43965187-43965206 | Msa0453530:intron | 30.0% | |
| AGTTTGATCTAAATTGGTAG+AGG | - | chr3_3:43965393-43965412 | Msa0453530:CDS | 30.0% | |
| !!! | GTTATTTTGATAGAGTCCAA+TGG | - | chr3_3:43965467-43965486 | Msa0453530:intron | 30.0% |
| !!! | TATTTTGATAGAGTCCAATG+GGG | - | chr3_3:43965469-43965488 | Msa0453530:intron | 30.0% |
| CTTTAAGTACATGTTTGGTT+TGG | - | chr3_3:43965547-43965566 | Msa0453530:CDS | 30.0% | |
| !! | CTCTTAACTGAAGTATTGAA+TGG | - | chr3_3:43965653-43965672 | Msa0453530:intron | 30.0% |
| TGTACTTGTGAATCAGTAAA+AGG | - | chr3_3:43965681-43965700 | Msa0453530:intron | 30.0% | |
| GAATGCTTTACAAATCACAA+AGG | - | chr3_3:43965776-43965795 | Msa0453530:intron | 30.0% | |
| ! | TCAGAAATTTTGGATGATGT+TGG | - | chr3_3:43965801-43965820 | Msa0453530:CDS | 30.0% |
| AGTCAGATGATAACAAAGAT+TGG | - | chr3_3:43965979-43965998 | Msa0453530:CDS | 30.0% | |
| GTCAGATGATAACAAAGATT+GGG | - | chr3_3:43965980-43965999 | Msa0453530:CDS | 30.0% | |
| AAATTTATCACCATAGTCAC+AGG | + | chr3_3:43966015-43966034 | None:intergenic | 30.0% | |
| !!! | TCCTAACCAATCTAGTTTTT+TGG | - | chr3_3:43966109-43966128 | Msa0453530:intron | 30.0% |
| ! | ACCAAAAAACTAGATTGGTT+AGG | + | chr3_3:43966113-43966132 | None:intergenic | 30.0% |
| ! | TAGTAGAATGTGTTTTATGG+CGG | - | chr3_3:43966224-43966243 | Msa0453530:intron | 30.0% |
| TAATCAGTGTTGTCTAATAG+CGG | - | chr3_3:43966362-43966381 | Msa0453530:intron | 30.0% | |
| ! | AATCGGATTGTTTTCCAAAT+AGG | - | chr3_3:43966553-43966572 | Msa0453530:intron | 30.0% |
| CTACTATGTGAAATAAAGAG+TGG | + | chr3_3:43966755-43966774 | None:intergenic | 30.0% | |
| TTGTTTACACTGCTTGTAAT+CGG | - | chr3_3:43966797-43966816 | Msa0453530:intron | 30.0% | |
| ! | TTTGAGTTTCCAGTCTTTAT+TGG | - | chr3_3:43967054-43967073 | Msa0453530:intron | 30.0% |
| GAAATGAAACTTTCAGATGT+TGG | - | chr3_3:43967234-43967253 | Msa0453530:intron | 30.0% | |
| CTTCAAGTGAATATCACAAA+TGG | + | chr3_3:43967382-43967401 | None:intergenic | 30.0% | |
| !! | TAACAAAGCATTGTCTATGA+AGG | - | chr3_3:43967530-43967549 | Msa0453530:intron | 30.0% |
| AGAAAATACAAAAGAGAACG+AGG | - | chr3_3:43967629-43967648 | Msa0453530:intron | 30.0% | |
| !!! | AATTTTCAGGTTAGGAATCT+TGG | - | chr3_3:43967846-43967865 | Msa0453530:intron | 30.0% |
| GAAAACAACCAAATTGTCAA+AGG | + | chr3_3:43967930-43967949 | None:intergenic | 30.0% | |
| ! | TCGAGATTTTACAGATTCTA+AGG | - | chr3_3:43968227-43968246 | Msa0453530:CDS | 30.0% |
| ! | CGAGATTTTACAGATTCTAA+GGG | - | chr3_3:43968228-43968247 | Msa0453530:CDS | 30.0% |
| !! | ATTTTACAGATTCTAAGGGA+AGG | - | chr3_3:43968232-43968251 | Msa0453530:CDS | 30.0% |
| GTAGTGAAACATCTCTAATT+TGG | + | chr3_3:43968281-43968300 | None:intergenic | 30.0% | |
| CAAACATACAACAGTAAAAG+CGG | + | chr3_3:43968329-43968348 | None:intergenic | 30.0% | |
| CCTACAATTTAGGTATTTCA+TGG | + | chr3_3:43968382-43968401 | None:intergenic | 30.0% | |
| CCATGAAATACCTAAATTGT+AGG | - | chr3_3:43968379-43968398 | Msa0453530:intron | 30.0% | |
| TAGAATAGTGCCTACAATTT+AGG | + | chr3_3:43968392-43968411 | None:intergenic | 30.0% | |
| ! | AAGTAGCTGCAGAATATTTT+AGG | - | chr3_3:43968418-43968437 | Msa0453530:intron | 30.0% |
| !!! | CCTGTTTTTACCTAATATGA+CGG | + | chr3_3:43968584-43968603 | None:intergenic | 30.0% |
| CGTCATATTAGGTAAAAACA+GGG | - | chr3_3:43968582-43968601 | Msa0453530:intron | 30.0% | |
| AGCAGATATCAAGAGTTTAT+GGG | - | chr3_3:43968618-43968637 | Msa0453530:intron | 30.0% | |
| TTGTATTTACATGGATAAGG+GGG | + | chr3_3:43968690-43968709 | None:intergenic | 30.0% | |
| CTTGTATTTACATGGATAAG+GGG | + | chr3_3:43968691-43968710 | None:intergenic | 30.0% | |
| TGAACACGGTAATAATGAAA+AGG | + | chr3_3:43968762-43968781 | None:intergenic | 30.0% | |
| ! | TATTTTCAATTTGAAGGCAG+TGG | - | chr3_3:43968901-43968920 | Msa0453530:intron | 30.0% |
| !! | AACAACTTTATGTTGGTTTC+AGG | - | chr3_3:43969289-43969308 | Msa0453530:intron | 30.0% |
| ATAAATAGACATTGCTAGAG+GGG | - | chr3_3:43969445-43969464 | Msa0453530:intron | 30.0% | |
| ! | TTCAGAAGTAGTAGTTTTCT+AGG | - | chr3_3:43969531-43969550 | Msa0453530:CDS | 30.0% |
| ! | TCAGAAGTAGTAGTTTTCTA+GGG | - | chr3_3:43969532-43969551 | Msa0453530:CDS | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | + | chr3_3:43969701-43969720 | None:intergenic | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | chr3_3:43969702-43969721 | Msa0453530:intron | 30.0% |
| ! | ATCGTAAATTGGTTTAGATG+TGG | - | chr3_3:43970015-43970034 | Msa0453530:intron | 30.0% |
| TATTGTGAGACAAGAATTTC+AGG | + | chr3_3:43970165-43970184 | None:intergenic | 30.0% | |
| TGTCTATTGTAAGGTTAATG+GGG | - | chr3_3:43970192-43970211 | Msa0453530:intron | 30.0% | |
| !! | TTAAATTGCATCGATTGTGA+TGG | - | chr3_3:43970289-43970308 | Msa0453530:intron | 30.0% |
| AGCTGTTAAATTTCACTGTT+TGG | - | chr3_3:43970364-43970383 | Msa0453530:intron | 30.0% | |
| ! | GTTATCAATATTTCAGGTCA+AGG | - | chr3_3:43970598-43970617 | Msa0453530:intron | 30.0% |
| ! | AATATTTCAGGTCAAGGAAA+AGG | - | chr3_3:43970604-43970623 | Msa0453530:intron | 30.0% |
| ! | ATTTATTTCTTATTGCGAGG+GGG | - | chr3_3:43970797-43970816 | Msa0453530:intron | 30.0% |
| TTGAAGGATGAAGAGTAATA+TGG | + | chr3_3:43970861-43970880 | None:intergenic | 30.0% | |
| !! | TTTGTTGCTTACCTTCTTTT+TGG | - | chr3_3:43970883-43970902 | Msa0453530:intron | 30.0% |
| AAGTTGTTTAAATGGTCACA+TGG | + | chr3_3:43971103-43971122 | None:intergenic | 30.0% | |
| TAACTTACACTCATTCAGAA+AGG | - | chr3_3:43971212-43971231 | Msa0453530:intron | 30.0% | |
| ! | TTGAACTTTTCATAAACTGC+AGG | - | chr3_3:43971284-43971303 | Msa0453530:intron | 30.0% |
| ACAAAATTTCTGTGACTCTT+TGG | - | chr3_3:43971523-43971542 | Msa0453530:five_prime_UTR | 30.0% | |
| GCACGAATAGAGAAATTTGT+TGG | + | chr3_3:43962627-43962646 | None:intergenic | 35.0% | |
| AGAAAACAAACCAGAATCAG+TGG | + | chr3_3:43962664-43962683 | None:intergenic | 35.0% | |
| GTTGTGACTTTGCTTGATTA+TGG | - | chr3_3:43962765-43962784 | Msa0453530:intron | 35.0% | |
| AGGAATGCTATCAAATTCCT+TGG | - | chr3_3:43962810-43962829 | Msa0453530:intron | 35.0% | |
| !! | TTAATGTGTGTTTGGTTCTG+CGG | - | chr3_3:43962870-43962889 | Msa0453530:intron | 35.0% |
| AGTAAACCGCTGAATTAGTT+TGG | - | chr3_3:43963063-43963082 | Msa0453530:intron | 35.0% | |
| ! | GTAAACCGCTGAATTAGTTT+GGG | - | chr3_3:43963064-43963083 | Msa0453530:intron | 35.0% |
| TAGTTTGGGAGCTCTTATAT+AGG | - | chr3_3:43963078-43963097 | Msa0453530:intron | 35.0% | |
| AACGTTAAGGACTAATTTGG+CGG | - | chr3_3:43963331-43963350 | Msa0453530:CDS | 35.0% | |
| AAACTAGAAGTCAATTCTGG+AGG | - | chr3_3:43963386-43963405 | Msa0453530:CDS | 35.0% | |
| TACCATGAATCCAAACGAAT+GGG | - | chr3_3:43963484-43963503 | Msa0453530:intron | 35.0% | |
| TGCATTCAAAATGTCTTCTG+GGG | + | chr3_3:43963565-43963584 | None:intergenic | 35.0% | |
| CTTGCATTCAAAATGTCTTC+TGG | + | chr3_3:43963567-43963586 | None:intergenic | 35.0% | |
| !! | ATGGAGGTGTTAAGTAAAAC+TGG | - | chr3_3:43963627-43963646 | Msa0453530:intron | 35.0% |
| !! | TGGAGGTGTTAAGTAAAACT+GGG | - | chr3_3:43963628-43963647 | Msa0453530:intron | 35.0% |
| AGTTTGTAATATTACGCCTG+TGG | - | chr3_3:43963708-43963727 | Msa0453530:intron | 35.0% | |
| GTTTGTAATATTACGCCTGT+GGG | - | chr3_3:43963709-43963728 | Msa0453530:intron | 35.0% | |
| TTTGTAATATTACGCCTGTG+GGG | - | chr3_3:43963710-43963729 | Msa0453530:intron | 35.0% | |
| CTGTGACTCTCTATTATATC+AGG | + | chr3_3:43963801-43963820 | None:intergenic | 35.0% | |
| AGGTTTGTGAAGGAAAACAA+AGG | - | chr3_3:43963951-43963970 | Msa0453530:intron | 35.0% | |
| ! | ATTAAGAATGAGTTGGACCA+AGG | - | chr3_3:43964053-43964072 | Msa0453530:intron | 35.0% |
| ATCAGGTTAGAAAGAGTTAG+TGG | - | chr3_3:43964151-43964170 | Msa0453530:intron | 35.0% | |
| ! | TGTTGTAACTTTTGCAGGAT+GGG | - | chr3_3:43964457-43964476 | Msa0453530:intron | 35.0% |
| CCAAGACAAATGCCTAAAAA+TGG | + | chr3_3:43964517-43964536 | None:intergenic | 35.0% | |
| !! | CCATTTTTAGGCATTTGTCT+TGG | - | chr3_3:43964514-43964533 | Msa0453530:intron | 35.0% |
| ! | TGTTGTTGTTGTTGTTGTTG+TGG | - | chr3_3:43964601-43964620 | Msa0453530:intron | 35.0% |
| ! | TGTGTAATTTCACATCGACT+TGG | + | chr3_3:43964717-43964736 | None:intergenic | 35.0% |
| TTCATTTAGGCCAGTTCAAA+TGG | - | chr3_3:43964833-43964852 | Msa0453530:intron | 35.0% | |
| TAAAAAATCCTATCGCTCCA+AGG | + | chr3_3:43964892-43964911 | None:intergenic | 35.0% | |
| !!! | TGGAGCGATAGGATTTTTTA+TGG | - | chr3_3:43964892-43964911 | Msa0453530:intron | 35.0% |
| !!! | GGAGCGATAGGATTTTTTAT+GGG | - | chr3_3:43964893-43964912 | Msa0453530:intron | 35.0% |
| !!! | CGATAGGATTTTTTATGGGT+CGG | - | chr3_3:43964897-43964916 | Msa0453530:intron | 35.0% |
| !!! | GATAGGATTTTTTATGGGTC+GGG | - | chr3_3:43964898-43964917 | Msa0453530:intron | 35.0% |
| !!! | ATAGGATTTTTTATGGGTCG+GGG | - | chr3_3:43964899-43964918 | Msa0453530:intron | 35.0% |
| TTTAAGCTAGTTGGATCTGA+TGG | - | chr3_3:43965019-43965038 | Msa0453530:intron | 35.0% | |
| !! | AATTATAGCGGACAACTATG+TGG | - | chr3_3:43965097-43965116 | Msa0453530:CDS | 35.0% |
| GATGGTCCAGTAATGAATAT+TGG | - | chr3_3:43965138-43965157 | Msa0453530:intron | 35.0% | |
| TCAACCATCTTCTCATCAAT+TGG | + | chr3_3:43965258-43965277 | None:intergenic | 35.0% | |
| CTCCATAGAGGAAAATCAAA+TGG | - | chr3_3:43965310-43965329 | Msa0453530:intron | 35.0% | |
| !! | CTCCATTTGATTTTCCTCTA+TGG | + | chr3_3:43965315-43965334 | None:intergenic | 35.0% |
| CAAGAAATAATCTACCCCAT+TGG | + | chr3_3:43965486-43965505 | None:intergenic | 35.0% | |
| TGTGAATCAGTAAAAGGTCT+TGG | - | chr3_3:43965687-43965706 | Msa0453530:intron | 35.0% | |
| ! | AAAGCATTCCATCCAATATG+CGG | + | chr3_3:43965765-43965784 | None:intergenic | 35.0% |
| ! | CACAAAGGACTCAGAAATTT+TGG | - | chr3_3:43965791-43965810 | Msa0453530:CDS | 35.0% |
| ! | AAGAGTGCACAAAATAGACA+TGG | + | chr3_3:43965833-43965852 | None:intergenic | 35.0% |
| AGAGAAAAGTGGAAACATAC+AGG | + | chr3_3:43965867-43965886 | None:intergenic | 35.0% | |
| ! | TGGAGATTTCTAGAGAAAAG+TGG | + | chr3_3:43965878-43965897 | None:intergenic | 35.0% |
| TAGAAATCTCCATGTTACTC+TGG | - | chr3_3:43965886-43965905 | Msa0453530:intron | 35.0% | |
| CATTCTACTAAAATTGGCCA+TGG | + | chr3_3:43966214-43966233 | None:intergenic | 35.0% | |
| !!! | TGTTTTATGGCGGATCAAAA+TGG | - | chr3_3:43966234-43966253 | Msa0453530:intron | 35.0% |
| ! | GGATCAAAATGGCATAGTTT+TGG | - | chr3_3:43966245-43966264 | Msa0453530:intron | 35.0% |
| ACTATCCTAGTTTCGCTATT+AGG | - | chr3_3:43966440-43966459 | Msa0453530:CDS | 35.0% | |
| CTATCCTAGTTTCGCTATTA+GGG | - | chr3_3:43966441-43966460 | Msa0453530:CDS | 35.0% | |
| ! | TAGCAGAAGTAGAGAGTTTT+AGG | - | chr3_3:43966505-43966524 | Msa0453530:intron | 35.0% |
| ! | AGCAGAAGTAGAGAGTTTTA+GGG | - | chr3_3:43966506-43966525 | Msa0453530:intron | 35.0% |
| TGCTGCATAAAGATAAAGCA+GGG | + | chr3_3:43966687-43966706 | None:intergenic | 35.0% | |
| ATGCTGCATAAAGATAAAGC+AGG | + | chr3_3:43966688-43966707 | None:intergenic | 35.0% | |
| CTATGTGAAATAAAGAGTGG+AGG | + | chr3_3:43966752-43966771 | None:intergenic | 35.0% | |
| GAAATGAAAGCGGGAAAAAT+AGG | - | chr3_3:43966980-43966999 | Msa0453530:intron | 35.0% | |
| CTTGTATCCAAATTCAAGTG+TGG | - | chr3_3:43967278-43967297 | Msa0453530:intron | 35.0% | |
| AAGCTTCAAAACTCGCAAAA+AGG | - | chr3_3:43967422-43967441 | Msa0453530:intron | 35.0% | |
| AGCTTCAAAACTCGCAAAAA+GGG | - | chr3_3:43967423-43967442 | Msa0453530:intron | 35.0% | |
| GATGTGAGAGCAAATGATAA+CGG | - | chr3_3:43967567-43967586 | Msa0453530:intron | 35.0% | |
| ATGTGAGAGCAAATGATAAC+GGG | - | chr3_3:43967568-43967587 | Msa0453530:intron | 35.0% | |
| GCTCAACAGTACTATAAAGA+TGG | - | chr3_3:43967885-43967904 | Msa0453530:intron | 35.0% | |
| ATTGAAGGTTGAACGTTAGT+TGG | + | chr3_3:43967978-43967997 | None:intergenic | 35.0% | |
| TAATGTTTAGAAAGCTGACC+TGG | + | chr3_3:43968001-43968020 | None:intergenic | 35.0% | |
| GTCAGCTTTCTAAACATTAC+TGG | - | chr3_3:43968002-43968021 | Msa0453530:CDS | 35.0% | |
| ATTTCACAAACCTGCAACAT+TGG | + | chr3_3:43968056-43968075 | None:intergenic | 35.0% | |
| TTGGAGTTTCATTCTCACTA+TGG | - | chr3_3:43968138-43968157 | Msa0453530:intron | 35.0% | |
| TTCTCACTATGGTTCTTCAT+AGG | - | chr3_3:43968149-43968168 | Msa0453530:intron | 35.0% | |
| ! | TTGTAGGCACTATTCTAGTT+TGG | - | chr3_3:43968395-43968414 | Msa0453530:intron | 35.0% |
| !! | CTGCAGAATATTTTAGGTCT+GGG | - | chr3_3:43968424-43968443 | Msa0453530:intron | 35.0% |
| !! | TGCAGAATATTTTAGGTCTG+GGG | - | chr3_3:43968425-43968444 | Msa0453530:intron | 35.0% |
| ATAAACTGCATCACTTCCAA+TGG | + | chr3_3:43968463-43968482 | None:intergenic | 35.0% | |
| GCCGAAGAATATTTAAGAAC+TGG | - | chr3_3:43968486-43968505 | Msa0453530:intron | 35.0% | |
| CCGTCATATTAGGTAAAAAC+AGG | - | chr3_3:43968581-43968600 | Msa0453530:intron | 35.0% | |
| GAGCAGATATCAAGAGTTTA+TGG | - | chr3_3:43968617-43968636 | Msa0453530:intron | 35.0% | |
| ATCAAGAGTTTATGGGAATC+AGG | - | chr3_3:43968625-43968644 | Msa0453530:intron | 35.0% | |
| ATAGAAGTAAGCATGACCAT+TGG | + | chr3_3:43968662-43968681 | None:intergenic | 35.0% | |
| TGTATTTACATGGATAAGGG+GGG | + | chr3_3:43968689-43968708 | None:intergenic | 35.0% | |
| GGTAATAATGAAAAGGAGAG+GGG | + | chr3_3:43968755-43968774 | None:intergenic | 35.0% | |
| CGGTAATAATGAAAAGGAGA+GGG | + | chr3_3:43968756-43968775 | None:intergenic | 35.0% | |
| ACGGTAATAATGAAAAGGAG+AGG | + | chr3_3:43968757-43968776 | None:intergenic | 35.0% | |
| ACAAAAACACACAGAGTAGT+TGG | + | chr3_3:43968836-43968855 | None:intergenic | 35.0% | |
| ATTGTTTACGTAAACCCTAC+GGG | + | chr3_3:43968942-43968961 | None:intergenic | 35.0% | |
| GATTGTTTACGTAAACCCTA+CGG | + | chr3_3:43968943-43968962 | None:intergenic | 35.0% | |
| GAAATGGAAAAAACTTCACC+TGG | + | chr3_3:43969004-43969023 | None:intergenic | 35.0% | |
| TACATAGGTCAATTGCAAGT+AGG | - | chr3_3:43969092-43969111 | Msa0453530:intron | 35.0% | |
| CAATTGCAAGTAGGAAAATC+TGG | - | chr3_3:43969101-43969120 | Msa0453530:intron | 35.0% | |
| TAGGAAAATCTGGCATCTTT+AGG | - | chr3_3:43969111-43969130 | Msa0453530:intron | 35.0% | |
| ! | AAATCTGGCATCTTTAGGTT+TGG | - | chr3_3:43969116-43969135 | Msa0453530:intron | 35.0% |
| TCCTACTTCAAACAAGTACT+GGG | + | chr3_3:43969157-43969176 | None:intergenic | 35.0% | |
| ATCCTACTTCAAACAAGTAC+TGG | + | chr3_3:43969158-43969177 | None:intergenic | 35.0% | |
| ! | TATATATCCCTTGTTGTGTC+TGG | + | chr3_3:43969509-43969528 | None:intergenic | 35.0% |
| GAGGTTTCATGACTAAGTAA+CGG | - | chr3_3:43969590-43969609 | Msa0453530:intron | 35.0% | |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | - | chr3_3:43969832-43969851 | Msa0453530:intron | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | - | chr3_3:43969836-43969855 | Msa0453530:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr3_3:43969900-43969919 | Msa0453530:intron | 35.0% |
| CATCGCGAGATTATAATTCA+CGG | - | chr3_3:43970080-43970099 | Msa0453530:intron | 35.0% | |
| ATCGCGAGATTATAATTCAC+GGG | - | chr3_3:43970081-43970100 | Msa0453530:intron | 35.0% | |
| TCTCTTAGAATTTCGTCCAA+GGG | - | chr3_3:43970104-43970123 | Msa0453530:intron | 35.0% | |
| GTCTATTGTAAGGTTAATGG+GGG | - | chr3_3:43970193-43970212 | Msa0453530:intron | 35.0% | |
| TCTATTGTAAGGTTAATGGG+GGG | - | chr3_3:43970194-43970213 | Msa0453530:intron | 35.0% | |
| AGAATGACAAGTATAAAGGC+CGG | + | chr3_3:43970553-43970572 | None:intergenic | 35.0% | |
| AACACATCGGAAAAATGATC+AGG | + | chr3_3:43970706-43970725 | None:intergenic | 35.0% | |
| ATGAAGAGTAATATGGCCAT+TGG | + | chr3_3:43970854-43970873 | None:intergenic | 35.0% | |
| AGGTAAGCAACAAATGTTGA+AGG | + | chr3_3:43970877-43970896 | None:intergenic | 35.0% | |
| !!! | GAGAACTTTTTTTATGCGAG+AGG | - | chr3_3:43971030-43971049 | Msa0453530:intron | 35.0% |
| ATGACCATTAAAACAGCATG+AGG | - | chr3_3:43971061-43971080 | Msa0453530:intron | 35.0% | |
| CCATATTCACCCTATATAGA+TGG | + | chr3_3:43971184-43971203 | None:intergenic | 35.0% | |
| CCATCTATATAGGGTGAATA+TGG | - | chr3_3:43971181-43971200 | Msa0453530:intron | 35.0% | |
| ! | TGTTCTTTCACTGACTGAAT+AGG | + | chr3_3:43971312-43971331 | None:intergenic | 35.0% |
| ATGAGCAGGTGAGACAATTT+CGG | + | chr3_3:43962486-43962505 | None:intergenic | 40.0% | |
| ! | CCATTGTTTGTTGAATGAGC+AGG | + | chr3_3:43962500-43962519 | None:intergenic | 40.0% |
| CCTGCTCATTCAACAAACAA+TGG | - | chr3_3:43962497-43962516 | Msa0453530:three_prime_UTR | 40.0% | |
| GCTCATTCAACAAACAATGG+AGG | - | chr3_3:43962500-43962519 | Msa0453530:three_prime_UTR | 40.0% | |
| !! | TCTTCTACTTCCACTGATTC+TGG | - | chr3_3:43962651-43962670 | Msa0453530:three_prime_UTR | 40.0% |
| ACTTTGCTTGATTATGGTGC+TGG | - | chr3_3:43962771-43962790 | Msa0453530:intron | 40.0% | |
| !! | ATTATGGTGCTGGCAATGTT+CGG | - | chr3_3:43962781-43962800 | Msa0453530:intron | 40.0% |
| AAACGACCGGACTAATTTAG+TGG | + | chr3_3:43962967-43962986 | None:intergenic | 40.0% | |
| !! | TAGTCCGGTCGTTTTCAAAT+AGG | - | chr3_3:43962973-43962992 | Msa0453530:intron | 40.0% |
| AGGACCTATTTGAAAACGAC+CGG | + | chr3_3:43962980-43962999 | None:intergenic | 40.0% | |
| CTCATATTACTCCTTCTGAG+AGG | - | chr3_3:43963151-43963170 | Msa0453530:intron | 40.0% | |
| ! | ACTCCTTCTGAGAGGATTAT+AGG | - | chr3_3:43963159-43963178 | Msa0453530:intron | 40.0% |
| ! | CTCCTTCTGAGAGGATTATA+GGG | - | chr3_3:43963160-43963179 | Msa0453530:intron | 40.0% |
| TGAGAACACCTACAACGTTA+AGG | - | chr3_3:43963318-43963337 | Msa0453530:CDS | 40.0% | |
| CATTCGTTTGGATTCATGGT+AGG | + | chr3_3:43963485-43963504 | None:intergenic | 40.0% | |
| CTACCATGAATCCAAACGAA+TGG | - | chr3_3:43963483-43963502 | Msa0453530:intron | 40.0% | |
| AACCCATTCGTTTGGATTCA+TGG | + | chr3_3:43963489-43963508 | None:intergenic | 40.0% | |
| TTACTTAACACCTCCATAGC+AGG | + | chr3_3:43963624-43963643 | None:intergenic | 40.0% | |
| ACAACACATAATAGGAGCCT+TGG | + | chr3_3:43964073-43964092 | None:intergenic | 40.0% | |
| ! | AGCAGTGTTGTAACTTTTGC+AGG | - | chr3_3:43964452-43964471 | Msa0453530:intron | 40.0% |
| ! | GTGTTGTAACTTTTGCAGGA+TGG | - | chr3_3:43964456-43964475 | Msa0453530:intron | 40.0% |
| !! | GAAAAGGATCGCCCATTTTT+AGG | - | chr3_3:43964502-43964521 | Msa0453530:intron | 40.0% |
| !! | CATCGACTTGGACAAAATCT+TGG | + | chr3_3:43964705-43964724 | None:intergenic | 40.0% |
| !!! | TAGGATTTTTTATGGGTCGG+GGG | - | chr3_3:43964900-43964919 | Msa0453530:intron | 40.0% |
| ATGCTGTGTATGTCACACAT+AGG | - | chr3_3:43964991-43965010 | Msa0453530:intron | 40.0% | |
| GATCTGATGGAAAGAATCTC+AGG | - | chr3_3:43965032-43965051 | Msa0453530:intron | 40.0% | |
| CCATCAAAGAACATCACCAT+TGG | + | chr3_3:43965123-43965142 | None:intergenic | 40.0% | |
| ! | CCAATGGTGATGTTCTTTGA+TGG | - | chr3_3:43965120-43965139 | Msa0453530:intron | 40.0% |
| AGCACCAATTGATGAGAAGA+TGG | - | chr3_3:43965251-43965270 | Msa0453530:intron | 40.0% | |
| GCATTAAGACGATTTGACCA+TGG | - | chr3_3:43965282-43965301 | Msa0453530:intron | 40.0% | |
| ACCATGGTAAAACTCCATAG+AGG | - | chr3_3:43965298-43965317 | Msa0453530:intron | 40.0% | |
| ! | TCCTCTATGGAGTTTTACCA+TGG | + | chr3_3:43965302-43965321 | None:intergenic | 40.0% |
| AAAGGTCTTGGCTTAATACC+TGG | - | chr3_3:43965699-43965718 | Msa0453530:intron | 40.0% | |
| TGATGAATCAAATCGCCCAA+CGG | + | chr3_3:43965727-43965746 | None:intergenic | 40.0% | |
| GGGCGATTTGATTCATCAAA+TGG | - | chr3_3:43965729-43965748 | Msa0453530:intron | 40.0% | |
| !!! | GGTTTTAGAGTACCGCATAT+TGG | - | chr3_3:43965750-43965769 | Msa0453530:intron | 40.0% |
| !! | TTAGAGTACCGCATATTGGA+TGG | - | chr3_3:43965754-43965773 | Msa0453530:intron | 40.0% |
| AGTGCACAAAATAGACATGG+TGG | + | chr3_3:43965830-43965849 | None:intergenic | 40.0% | |
| AAAGTGGAAACATACAGGCA+TGG | + | chr3_3:43965862-43965881 | None:intergenic | 40.0% | |
| TTTATCACCATAGTCACAGG+TGG | + | chr3_3:43966012-43966031 | None:intergenic | 40.0% | |
| TCTACTAAAATTGGCCATGG+CGG | + | chr3_3:43966211-43966230 | None:intergenic | 40.0% | |
| ! | TCAGTGTTATCGATTACGGA+TGG | + | chr3_3:43966278-43966297 | None:intergenic | 40.0% |
| GGTCTACGTGATTTAAGGAT+TGG | + | chr3_3:43966306-43966325 | None:intergenic | 40.0% | |
| ATTGCGGTCTACGTGATTTA+AGG | + | chr3_3:43966311-43966330 | None:intergenic | 40.0% | |
| ! | AGTGTCGTGGTTTTCATTGA+GGG | + | chr3_3:43966423-43966442 | None:intergenic | 40.0% |
| ! | TAGTGTCGTGGTTTTCATTG+AGG | + | chr3_3:43966424-43966443 | None:intergenic | 40.0% |
| ATCACCCTAATAGCGAAACT+AGG | + | chr3_3:43966448-43966467 | None:intergenic | 40.0% | |
| TTTCGCTATTAGGGTGATAG+CGG | - | chr3_3:43966450-43966469 | Msa0453530:CDS | 40.0% | |
| GTTTCTACTAGCTGATGTAG+CGG | - | chr3_3:43966479-43966498 | Msa0453530:intron | 40.0% | |
| GTGCATTACAGTGAATGTAG+AGG | + | chr3_3:43966627-43966646 | None:intergenic | 40.0% | |
| TAATCGGATTCTGCTTGTGT+GGG | - | chr3_3:43966813-43966832 | Msa0453530:intron | 40.0% | |
| !! | TTCCAGTCTTTATTGGCTCT+TGG | - | chr3_3:43967061-43967080 | Msa0453530:intron | 40.0% |
| TTCCAAGAGCCAATAAAGAC+TGG | + | chr3_3:43967066-43967085 | None:intergenic | 40.0% | |
| ! | ATCATGTTTCCTCCTTTTCG+TGG | - | chr3_3:43967186-43967205 | Msa0453530:intron | 40.0% |
| TCCAAATTCAAGTGTGGCAA+AGG | - | chr3_3:43967284-43967303 | Msa0453530:intron | 40.0% | |
| ACCTTTGCCACACTTGAATT+TGG | + | chr3_3:43967288-43967307 | None:intergenic | 40.0% | |
| AAATTCAAGTGTGGCAAAGG+TGG | - | chr3_3:43967287-43967306 | Msa0453530:intron | 40.0% | |
| AATTCAAGTGTGGCAAAGGT+GGG | - | chr3_3:43967288-43967307 | Msa0453530:intron | 40.0% | |
| TTCACTTGAAGACAGAAGAC+TGG | - | chr3_3:43967391-43967410 | Msa0453530:intron | 40.0% | |
| ! | TGTGAGAGCAAATGATAACG+GGG | - | chr3_3:43967569-43967588 | Msa0453530:intron | 40.0% |
| ! | TACATCATACTGGTCTCCTT+TGG | + | chr3_3:43967607-43967626 | None:intergenic | 40.0% |
| CTATAAAGATGGAGCTGATG+AGG | - | chr3_3:43967896-43967915 | Msa0453530:intron | 40.0% | |
| TAACGTTCAACCTTCAATCC+AGG | - | chr3_3:43967980-43967999 | Msa0453530:CDS | 40.0% | |
| ACATTGGTAGATCACCAAGA+GGG | + | chr3_3:43968040-43968059 | None:intergenic | 40.0% | |
| AACATTGGTAGATCACCAAG+AGG | + | chr3_3:43968041-43968060 | None:intergenic | 40.0% | |
| ! | GTTTTTGTGCCCTTAACAGT+TGG | - | chr3_3:43968195-43968214 | Msa0453530:CDS | 40.0% |
| ATTCCACCACCAACTGTTAA+GGG | + | chr3_3:43968207-43968226 | None:intergenic | 40.0% | |
| AATTCCACCACCAACTGTTA+AGG | + | chr3_3:43968208-43968227 | None:intergenic | 40.0% | |
| !! | GCTGCAGAATATTTTAGGTC+TGG | - | chr3_3:43968423-43968442 | Msa0453530:intron | 40.0% |
| TCAGAGATAGCACGATTTAG+AGG | + | chr3_3:43968550-43968569 | None:intergenic | 40.0% | |
| GTTGCAATGACCGTCATATT+AGG | - | chr3_3:43968571-43968590 | Msa0453530:intron | 40.0% | |
| ! | TCTTGATATCTGCTCTAAGC+TGG | + | chr3_3:43968612-43968631 | None:intergenic | 40.0% |
| TAATGGTACATGCACGTTCA+GGG | + | chr3_3:43968728-43968747 | None:intergenic | 40.0% | |
| ATAATGGTACATGCACGTTC+AGG | + | chr3_3:43968729-43968748 | None:intergenic | 40.0% | |
| AATAATGAAAAGGAGAGGGG+AGG | + | chr3_3:43968752-43968771 | None:intergenic | 40.0% | |
| TTGTTTACGTAAACCCTACG+GGG | + | chr3_3:43968941-43968960 | None:intergenic | 40.0% | |
| ! | GTCTGGAATTGCACATCATT+TGG | + | chr3_3:43968965-43968984 | None:intergenic | 40.0% |
| TGTGCAATTCCAGACCATAA+AGG | - | chr3_3:43968970-43968989 | Msa0453530:intron | 40.0% | |
| GACTTGAAACCTTTATGGTC+TGG | + | chr3_3:43968982-43969001 | None:intergenic | 40.0% | |
| ! | ACCATAAAGGTTTCAAGTCC+AGG | - | chr3_3:43968983-43969002 | Msa0453530:intron | 40.0% |
| ACCTGGACTTGAAACCTTTA+TGG | + | chr3_3:43968987-43969006 | None:intergenic | 40.0% | |
| ! | AGTACTGGGCATAATTCTTC+AGG | + | chr3_3:43969143-43969162 | None:intergenic | 40.0% |
| ! | GTTTGAAGTAGGATGTCCTA+TGG | - | chr3_3:43969164-43969183 | Msa0453530:intron | 40.0% |
| CATCTTAAAGTGCACTCACA+AGG | + | chr3_3:43969230-43969249 | None:intergenic | 40.0% | |
| !! | ATGTTGGTTTCAGGTCCAAA+TGG | - | chr3_3:43969298-43969317 | Msa0453530:intron | 40.0% |
| CAGGCATATTCTTCTCCATT+TGG | + | chr3_3:43969316-43969335 | None:intergenic | 40.0% | |
| CAAATGGAGAAGAATATGCC+TGG | - | chr3_3:43969314-43969333 | Msa0453530:intron | 40.0% | |
| ACTTACTGTACACTGATACC+AGG | + | chr3_3:43969335-43969354 | None:intergenic | 40.0% | |
| !! | CTGGTCAAGTTTTGTATGAC+AGG | + | chr3_3:43969490-43969509 | None:intergenic | 40.0% |
| AAACTTGACCAGACACAACA+AGG | - | chr3_3:43969498-43969517 | Msa0453530:CDS | 40.0% | |
| AACTTGACCAGACACAACAA+GGG | - | chr3_3:43969499-43969518 | Msa0453530:CDS | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr3_3:43969940-43969959 | None:intergenic | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | - | chr3_3:43969835-43969854 | Msa0453530:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr3_3:43969940-43969959 | Msa0453530:intron | 40.0% |
| GTCTCTTAGAATTTCGTCCA+AGG | - | chr3_3:43970103-43970122 | Msa0453530:intron | 40.0% | |
| GCAAAAGCTGTTGAAGAACT+TGG | - | chr3_3:43970250-43970269 | Msa0453530:intron | 40.0% | |
| ! | TTGCTGCTGGCATTTTTCAT+AGG | - | chr3_3:43970752-43970771 | Msa0453530:intron | 40.0% |
| ! | TGCTGGCATTTTTCATAGGA+AGG | - | chr3_3:43970756-43970775 | Msa0453530:intron | 40.0% |
| ! | TGGCATTTTTCATAGGAAGG+AGG | - | chr3_3:43970759-43970778 | Msa0453530:intron | 40.0% |
| !!! | GTCACCTCATGCTGTTTTAA+TGG | + | chr3_3:43971068-43971087 | None:intergenic | 40.0% |
| GACCATCCATGTATGTGATA+AGG | - | chr3_3:43971131-43971150 | Msa0453530:intron | 40.0% | |
| TTGTCGCCTTATCACATACA+TGG | + | chr3_3:43971140-43971159 | None:intergenic | 40.0% | |
| TTTCTGTGACTCTTTGGTAC+AGG | - | chr3_3:43971529-43971548 | Msa0453530:five_prime_UTR | 40.0% | |
| TAGCAGCTGAAATGGGAGAT+TGG | + | chr3_3:43962455-43962474 | None:intergenic | 45.0% | |
| ! | GTCGCTTTAGCAGCTGAAAT+GGG | + | chr3_3:43962462-43962481 | None:intergenic | 45.0% |
| !! | AGGAGAGTGGGTTTTTGTGA+CGG | + | chr3_3:43962569-43962588 | None:intergenic | 45.0% |
| !!! | TTTTGAGATTGCGAGAGCGT+GGG | + | chr3_3:43962602-43962621 | None:intergenic | 45.0% |
| !!! | TTTTTGAGATTGCGAGAGCG+TGG | + | chr3_3:43962603-43962622 | None:intergenic | 45.0% |
| GAGCTCCCAAACTAATTCAG+CGG | + | chr3_3:43963072-43963091 | None:intergenic | 45.0% | |
| GTCCCTATAATCCTCTCAGA+AGG | + | chr3_3:43963165-43963184 | None:intergenic | 45.0% | |
| GCGGTTTACTCGTTCATGTT+TGG | - | chr3_3:43963350-43963369 | Msa0453530:CDS | 45.0% | |
| ! | TGCAAGCCGTTTAGTCTTTC+CGG | - | chr3_3:43963581-43963600 | Msa0453530:intron | 45.0% |
| CAACACCCGGAAAGACTAAA+CGG | + | chr3_3:43963590-43963609 | None:intergenic | 45.0% | |
| TGGGGAGATATATGTGCTGA+CGG | - | chr3_3:43963728-43963747 | Msa0453530:CDS | 45.0% | |
| ACGCAATGCAACCACAATTG+AGG | + | chr3_3:43963843-43963862 | None:intergenic | 45.0% | |
| !!! | AGGATTTTTTATGGGTCGGG+GGG | - | chr3_3:43964901-43964920 | Msa0453530:intron | 45.0% |
| GCTTAATACCTGGAACCGTT+GGG | - | chr3_3:43965709-43965728 | Msa0453530:intron | 45.0% | |
| ATGTGACAGCCAGAGTAACA+TGG | + | chr3_3:43965898-43965917 | None:intergenic | 45.0% | |
| GGTTGTCAAAACATCGACCA+TGG | + | chr3_3:43966190-43966209 | None:intergenic | 45.0% | |
| ! | GTGTTATCGATTACGGATGG+CGG | + | chr3_3:43966275-43966294 | None:intergenic | 45.0% |
| GTAATCGGATTCTGCTTGTG+TGG | - | chr3_3:43966812-43966831 | Msa0453530:intron | 45.0% | |
| AATCGGATTCTGCTTGTGTG+GGG | - | chr3_3:43966814-43966833 | Msa0453530:intron | 45.0% | |
| TTGAAGACAGAAGACTGGTG+AGG | - | chr3_3:43967396-43967415 | Msa0453530:intron | 45.0% | |
| TGAAGACAGAAGACTGGTGA+GGG | - | chr3_3:43967397-43967416 | Msa0453530:intron | 45.0% | |
| GGTCTCCTTTGGTTACAACA+AGG | + | chr3_3:43967596-43967615 | None:intergenic | 45.0% | |
| TACTGTTGAGCAAGCTCAAC+TGG | + | chr3_3:43967876-43967895 | None:intergenic | 45.0% | |
| AGAAAGCTGACCTGGATTGA+AGG | + | chr3_3:43967993-43968012 | None:intergenic | 45.0% | |
| TGGTGATCTACCAATGTTGC+AGG | - | chr3_3:43968043-43968062 | Msa0453530:intron | 45.0% | |
| TTTGTGCCCTTAACAGTTGG+TGG | - | chr3_3:43968198-43968217 | Msa0453530:CDS | 45.0% | |
| GGGGCTGACAAAATATCCAT+TGG | - | chr3_3:43968444-43968463 | Msa0453530:intron | 45.0% | |
| TCAGGTAAGCTAACAGCCAA+TGG | - | chr3_3:43968643-43968662 | Msa0453530:intron | 45.0% | |
| AAAAGGAGAGGGGAGGATAA+TGG | + | chr3_3:43968745-43968764 | None:intergenic | 45.0% | |
| !! | TTGTTAGTATCGATCCCCGT+AGG | - | chr3_3:43968924-43968943 | Msa0453530:intron | 45.0% |
| !! | TGTTAGTATCGATCCCCGTA+GGG | - | chr3_3:43968925-43968944 | Msa0453530:intron | 45.0% |
| ! | GCCCAGTACTTGTTTGAAGT+AGG | - | chr3_3:43969153-43969172 | Msa0453530:intron | 45.0% |
| GTGCACTCACAAGGAAAAAG+AGG | + | chr3_3:43969221-43969240 | None:intergenic | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr3_3:43969939-43969958 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr3_3:43969939-43969958 | Msa0453530:intron | 45.0% |
| ! | GCCAATTGGTGCTTATGAAC+TGG | - | chr3_3:43970228-43970247 | Msa0453530:intron | 45.0% |
| GCCAGTTCATAAGCACCAAT+TGG | + | chr3_3:43970232-43970251 | None:intergenic | 45.0% | |
| TTGCCGTAGTTCAGTGCATA+TGG | - | chr3_3:43970828-43970847 | Msa0453530:intron | 45.0% | |
| TGGCCATATGCACTGAACTA+CGG | + | chr3_3:43970834-43970853 | None:intergenic | 45.0% | |
| AGTTCAGTGCATATGGCCAA+TGG | - | chr3_3:43970835-43970854 | Msa0453530:intron | 45.0% | |
| CGCCTTATCACATACATGGA+TGG | + | chr3_3:43971136-43971155 | None:intergenic | 45.0% | |
| !! | TGAATTTAAATAAATAAAAA+TGG | - | chr3_3:43970452-43970471 | Msa0453530:CDS | 5.0% |
| ! | CGTCGCTTTAGCAGCTGAAA+TGG | + | chr3_3:43962463-43962482 | None:intergenic | 50.0% |
| ! | GAGTATGACGGTGTTAACGG+CGG | + | chr3_3:43962528-43962547 | None:intergenic | 50.0% |
| ! | GGGGAGTATGACGGTGTTAA+CGG | + | chr3_3:43962531-43962550 | None:intergenic | 50.0% |
| ! | AGGGAAGTAGGGGAGTATGA+CGG | + | chr3_3:43962540-43962559 | None:intergenic | 50.0% |
| !! | GTTTTTGTGACGGAGGAGGA+GGG | + | chr3_3:43962559-43962578 | None:intergenic | 50.0% |
| !! | AGAGTGGGTTTTTGTGACGG+AGG | + | chr3_3:43962566-43962585 | None:intergenic | 50.0% |
| GGAATGTGGTGAAGGAGAGT+GGG | + | chr3_3:43962581-43962600 | None:intergenic | 50.0% | |
| ! | CTGGCAATGTTCGGAGTGTT+AGG | - | chr3_3:43962790-43962809 | Msa0453530:intron | 50.0% |
| ! | GCAAGCCGTTTAGTCTTTCC+GGG | - | chr3_3:43963582-43963601 | Msa0453530:intron | 50.0% |
| ! | CGTTTAGTCTTTCCGGGTGT+TGG | - | chr3_3:43963588-43963607 | Msa0453530:intron | 50.0% |
| ! | TGGAGCATTTGCACCTGCTA+TGG | - | chr3_3:43963608-43963627 | Msa0453530:intron | 50.0% |
| AGCATTTGCACCTGCTATGG+AGG | - | chr3_3:43963611-43963630 | Msa0453530:intron | 50.0% | |
| CAGCACATATATCTCCCCAC+AGG | + | chr3_3:43963727-43963746 | None:intergenic | 50.0% | |
| ! | GGGGAGATATATGTGCTGAC+GGG | - | chr3_3:43963729-43963748 | Msa0453530:CDS | 50.0% |
| ! | GGGAGATATATGTGCTGACG+GGG | - | chr3_3:43963730-43963749 | Msa0453530:CDS | 50.0% |
| !!! | GCTGACGGGGTTTTGAAAAG+CGG | - | chr3_3:43963743-43963762 | Msa0453530:CDS | 50.0% |
| AGACGATGCAGCCTCAATTG+TGG | - | chr3_3:43963829-43963848 | Msa0453530:intron | 50.0% | |
| CGATCTGAGCAGCGACATAA+CGG | + | chr3_3:43963884-43963903 | None:intergenic | 50.0% | |
| CAGAGAAACCTTGGAGCGAT+AGG | - | chr3_3:43964881-43964900 | Msa0453530:intron | 50.0% | |
| GGCTTAATACCTGGAACCGT+TGG | - | chr3_3:43965708-43965727 | Msa0453530:intron | 50.0% | |
| GGAAACATACAGGCATGGCA+CGG | + | chr3_3:43965857-43965876 | None:intergenic | 50.0% | |
| GTATCCTCCACCTGTGACTA+TGG | - | chr3_3:43966002-43966021 | Msa0453530:CDS | 50.0% | |
| ATCACCATAGTCACAGGTGG+AGG | + | chr3_3:43966009-43966028 | None:intergenic | 50.0% | |
| CAGTTCCATCCAGAGAAGAG+TGG | - | chr3_3:43966071-43966090 | Msa0453530:intron | 50.0% | |
| TTCCATCCAGAGAAGAGTGG+AGG | - | chr3_3:43966074-43966093 | Msa0453530:intron | 50.0% | |
| AACTTGCCTCCACTCTTCTC+TGG | + | chr3_3:43966083-43966102 | None:intergenic | 50.0% | |
| GTGTTGTCGAGTATCAGCCA+TGG | - | chr3_3:43966170-43966189 | Msa0453530:intron | 50.0% | |
| !!! | CGATGTTTTGACAACCGCCA+TGG | - | chr3_3:43966194-43966213 | Msa0453530:intron | 50.0% |
| GCGAAACTAGGATAGTGTCG+TGG | + | chr3_3:43966436-43966455 | None:intergenic | 50.0% | |
| AAAGAGTGGAGGCTGCATAG+CGG | + | chr3_3:43966741-43966760 | None:intergenic | 50.0% | |
| ! | TGTTTCCTCCTTTTCGTGGC+TGG | - | chr3_3:43967190-43967209 | Msa0453530:intron | 50.0% |
| AGAATGAGCCAGCCACGAAA+AGG | + | chr3_3:43967201-43967220 | None:intergenic | 50.0% | |
| ! | GGGGACCTTGTTGTAACCAA+AGG | - | chr3_3:43967588-43967607 | Msa0453530:intron | 50.0% |
| !! | GCTGTTGAAGAACTTGGTGC+TGG | - | chr3_3:43970256-43970275 | Msa0453530:intron | 50.0% |
| CTCAATCGGGAAGACTGACT+CGG | + | chr3_3:43970507-43970526 | None:intergenic | 50.0% | |
| TCAGCGCAGATTGCCTCAAT+CGG | + | chr3_3:43970521-43970540 | None:intergenic | 50.0% | |
| CAAGTATAAAGGCCGGCTAG+AGG | + | chr3_3:43970546-43970565 | None:intergenic | 50.0% | |
| ATCCCTGTGATTGCAAGCAG+TGG | - | chr3_3:43970670-43970689 | Msa0453530:intron | 50.0% | |
| CACCACTGCTTGCAATCACA+GGG | + | chr3_3:43970675-43970694 | None:intergenic | 50.0% | |
| !! | GGTTTTTGTGACGGAGGAGG+AGG | + | chr3_3:43962560-43962579 | None:intergenic | 55.0% |
| !! | GTGGGTTTTTGTGACGGAGG+AGG | + | chr3_3:43962563-43962582 | None:intergenic | 55.0% |
| GGGAATGTGGTGAAGGAGAG+TGG | + | chr3_3:43962582-43962601 | None:intergenic | 55.0% | |
| AGAGCGTGGGAATGTGGTGA+AGG | + | chr3_3:43962589-43962608 | None:intergenic | 55.0% | |
| ! | ATTGCGAGAGCGTGGGAATG+TGG | + | chr3_3:43962595-43962614 | None:intergenic | 55.0% |
| GGTGCAAATGCTCCAACACC+CGG | + | chr3_3:43963603-43963622 | None:intergenic | 55.0% | |
| !!! | GGGGTTTTGAAAAGCGGTCG+CGG | - | chr3_3:43963749-43963768 | Msa0453530:CDS | 55.0% |
| GCGGTCGCGGATAATGATTG+CGG | - | chr3_3:43963762-43963781 | Msa0453530:CDS | 55.0% | |
| CGATGCGCACAGAGAAACCT+TGG | - | chr3_3:43964872-43964891 | Msa0453530:intron | 55.0% | |
| TTATGGGTCGGGGGGTTAAC+TGG | - | chr3_3:43964909-43964928 | Msa0453530:intron | 55.0% | |
| TATGGGTCGGGGGGTTAACT+GGG | - | chr3_3:43964910-43964929 | Msa0453530:intron | 55.0% | |
| GCGGACAACTATGTGGCCAA+TGG | - | chr3_3:43965104-43965123 | Msa0453530:intron | 55.0% | |
| TCAAATCGCCCAACGGTTCC+AGG | + | chr3_3:43965720-43965739 | None:intergenic | 55.0% | |
| TGCCTCCACTCTTCTCTGGA+TGG | + | chr3_3:43966079-43966098 | None:intergenic | 55.0% | |
| ATGAGCCAGCCACGAAAAGG+AGG | + | chr3_3:43967198-43967217 | None:intergenic | 55.0% | |
| GGATTTCGCGACTTCCCTCT+TGG | - | chr3_3:43968023-43968042 | Msa0453530:CDS | 55.0% | |
| !! | GTGCCCTTAACAGTTGGTGG+TGG | - | chr3_3:43968201-43968220 | Msa0453530:CDS | 55.0% |
| AAGGTTAATGGGGGGCGAGA+AGG | - | chr3_3:43970202-43970221 | Msa0453530:intron | 55.0% | |
| TTAATGGGGGGCGAGAAGGT+CGG | - | chr3_3:43970206-43970225 | Msa0453530:intron | 55.0% | |
| CGAGTCAGTCTTCCCGATTG+AGG | - | chr3_3:43970505-43970524 | Msa0453530:intron | 55.0% | |
| CAGCGCAGATTGCCTCAATC+GGG | + | chr3_3:43970520-43970539 | None:intergenic | 55.0% | |
| ! | TCTGCGCTGATACCTCTAGC+CGG | - | chr3_3:43970531-43970550 | Msa0453530:intron | 55.0% |
| GCACCACTGCTTGCAATCAC+AGG | + | chr3_3:43970676-43970695 | None:intergenic | 55.0% | |
| GTGATTGCAAGCAGTGGTGC+TGG | - | chr3_3:43970676-43970695 | Msa0453530:intron | 55.0% | |
| AATGCCAGCAGCAAGTGCAG+CGG | + | chr3_3:43970746-43970765 | None:intergenic | 55.0% | |
| ACGGAGGAGGAGGGAAGTAG+GGG | + | chr3_3:43962550-43962569 | None:intergenic | 60.0% | |
| GACGGAGGAGGAGGGAAGTA+GGG | + | chr3_3:43962551-43962570 | None:intergenic | 60.0% | |
| TGACGGAGGAGGAGGGAAGT+AGG | + | chr3_3:43962552-43962571 | None:intergenic | 60.0% | |
| GGGCGAGAAGGTCGGCCAAT+TGG | - | chr3_3:43970214-43970233 | Msa0453530:intron | 65.0% | |
| ! | GCATCCGCTGCACTTGCTGC+TGG | - | chr3_3:43970739-43970758 | Msa0453530:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 43962425 | 43971612 | 43962425 | ID=Msa0453530;Name=Msa0453530 |
| chr3_3 | mRNA | 43962425 | 43971612 | 43962425 | ID=Msa0453530-mRNA-1;Parent=Msa0453530;Name=Msa0453530-mRNA-1;_AED=0.13;_eAED=0.13;_QI=91|0.81|0.82|1|1|1|17|247|528 |
| chr3_3 | exon | 43962425 | 43962731 | 43962425 | ID=Msa0453530-mRNA-1:exon:8053;Parent=Msa0453530-mRNA-1 |
| chr3_3 | exon | 43963257 | 43963423 | 43963257 | ID=Msa0453530-mRNA-1:exon:8052;Parent=Msa0453530-mRNA-1 |
| chr3_3 | exon | 43963727 | 43963832 | 43963727 | ID=Msa0453530-mRNA-1:exon:8051;Parent=Msa0453530-mRNA-1 |
| chr3_3 | exon | 43964689 | 43964726 | 43964689 | ID=Msa0453530-mRNA-1:exon:8050;Parent=Msa0453530-mRNA-1 |
| chr3_3 | exon | 43965033 | 43965120 | 43965033 | ID=Msa0453530-mRNA-1:exon:8049;Parent=Msa0453530-mRNA-1 |
| chr3_3 | exon | 43965391 | 43965444 | 43965391 | ID=Msa0453530-mRNA-1:exon:8048;Parent=Msa0453530-mRNA-1 |
| chr3_3 | exon | 43965528 | 43965636 | 43965528 | ID=Msa0453530-mRNA-1:exon:8047;Parent=Msa0453530-mRNA-1 |
| chr3_3 | exon | 43965784 | 43965866 | 43965784 | ID=Msa0453530-mRNA-1:exon:8046;Parent=Msa0453530-mRNA-1 |
| chr3_3 | exon | 43965973 | 43966035 | 43965973 | ID=Msa0453530-mRNA-1:exon:8045;Parent=Msa0453530-mRNA-1 |
| chr3_3 | exon | 43966387 | 43966485 | 43966387 | ID=Msa0453530-mRNA-1:exon:8044;Parent=Msa0453530-mRNA-1 |
| chr3_3 | exon | 43966593 | 43966635 | 43966593 | ID=Msa0453530-mRNA-1:exon:8043;Parent=Msa0453530-mRNA-1 |
| chr3_3 | exon | 43967938 | 43968056 | 43967938 | ID=Msa0453530-mRNA-1:exon:8042;Parent=Msa0453530-mRNA-1 |
| chr3_3 | exon | 43968171 | 43968340 | 43968171 | ID=Msa0453530-mRNA-1:exon:8041;Parent=Msa0453530-mRNA-1 |
| chr3_3 | exon | 43969460 | 43969563 | 43969460 | ID=Msa0453530-mRNA-1:exon:8040;Parent=Msa0453530-mRNA-1 |
| chr3_3 | exon | 43970388 | 43970482 | 43970388 | ID=Msa0453530-mRNA-1:exon:8039;Parent=Msa0453530-mRNA-1 |
| chr3_3 | exon | 43971240 | 43971271 | 43971240 | ID=Msa0453530-mRNA-1:exon:8038;Parent=Msa0453530-mRNA-1 |
| chr3_3 | exon | 43971365 | 43971612 | 43971365 | ID=Msa0453530-mRNA-1:exon:8037;Parent=Msa0453530-mRNA-1 |
| chr3_3 | five_prime_UTR | 43971522 | 43971612 | 43971522 | ID=Msa0453530-mRNA-1:five_prime_utr;Parent=Msa0453530-mRNA-1 |
| chr3_3 | CDS | 43971365 | 43971521 | 43971365 | ID=Msa0453530-mRNA-1:cds;Parent=Msa0453530-mRNA-1 |
| chr3_3 | CDS | 43971240 | 43971271 | 43971240 | ID=Msa0453530-mRNA-1:cds;Parent=Msa0453530-mRNA-1 |
| chr3_3 | CDS | 43970388 | 43970482 | 43970388 | ID=Msa0453530-mRNA-1:cds;Parent=Msa0453530-mRNA-1 |
| chr3_3 | CDS | 43969460 | 43969563 | 43969460 | ID=Msa0453530-mRNA-1:cds;Parent=Msa0453530-mRNA-1 |
| chr3_3 | CDS | 43968171 | 43968340 | 43968171 | ID=Msa0453530-mRNA-1:cds;Parent=Msa0453530-mRNA-1 |
| chr3_3 | CDS | 43967938 | 43968056 | 43967938 | ID=Msa0453530-mRNA-1:cds;Parent=Msa0453530-mRNA-1 |
| chr3_3 | CDS | 43966593 | 43966635 | 43966593 | ID=Msa0453530-mRNA-1:cds;Parent=Msa0453530-mRNA-1 |
| chr3_3 | CDS | 43966387 | 43966485 | 43966387 | ID=Msa0453530-mRNA-1:cds;Parent=Msa0453530-mRNA-1 |
| chr3_3 | CDS | 43965973 | 43966035 | 43965973 | ID=Msa0453530-mRNA-1:cds;Parent=Msa0453530-mRNA-1 |
| chr3_3 | CDS | 43965784 | 43965866 | 43965784 | ID=Msa0453530-mRNA-1:cds;Parent=Msa0453530-mRNA-1 |
| chr3_3 | CDS | 43965528 | 43965636 | 43965528 | ID=Msa0453530-mRNA-1:cds;Parent=Msa0453530-mRNA-1 |
| chr3_3 | CDS | 43965391 | 43965444 | 43965391 | ID=Msa0453530-mRNA-1:cds;Parent=Msa0453530-mRNA-1 |
| chr3_3 | CDS | 43965033 | 43965120 | 43965033 | ID=Msa0453530-mRNA-1:cds;Parent=Msa0453530-mRNA-1 |
| chr3_3 | CDS | 43964689 | 43964726 | 43964689 | ID=Msa0453530-mRNA-1:cds;Parent=Msa0453530-mRNA-1 |
| chr3_3 | CDS | 43963727 | 43963832 | 43963727 | ID=Msa0453530-mRNA-1:cds;Parent=Msa0453530-mRNA-1 |
| chr3_3 | CDS | 43963257 | 43963423 | 43963257 | ID=Msa0453530-mRNA-1:cds;Parent=Msa0453530-mRNA-1 |
| chr3_3 | CDS | 43962672 | 43962731 | 43962672 | ID=Msa0453530-mRNA-1:cds;Parent=Msa0453530-mRNA-1 |
| chr3_3 | three_prime_UTR | 43962425 | 43962671 | 43962425 | ID=Msa0453530-mRNA-1:three_prime_utr;Parent=Msa0453530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
