Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1258460 | GAU44984.1 | 91.648 | 455 | 32 | 3 | 1 | 453 | 1 | 451 | 0.0 | 846 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1258460 | sp|Q9SZX3|ASSY_ARATH | 75.822 | 426 | 73 | 5 | 53 | 451 | 70 | 492 | 0.0 | 650 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1258460 | A0A2Z6NKP2 | 91.648 | 455 | 32 | 3 | 1 | 453 | 1 | 451 | 0.0 | 846 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0021290 | Msa1258460 | 0.813830 | 2.098894e-51 | -8.615850e-47 |
| Msa0037290 | Msa1258460 | 0.817066 | 3.997419e-52 | -8.615850e-47 |
| Msa0040220 | Msa1258460 | 0.867602 | 1.212530e-65 | -8.615850e-47 |
| Msa0087910 | Msa1258460 | 0.838890 | 2.197339e-57 | -8.615850e-47 |
| Msa0629280 | Msa1258460 | 0.816253 | 6.082459e-52 | -8.615850e-47 |
| Msa0653060 | Msa1258460 | 0.801096 | 1.057630e-48 | -8.615850e-47 |
| Msa0708630 | Msa1258460 | 0.815662 | 8.241241e-52 | -8.615850e-47 |
| Msa0839570 | Msa1258460 | 0.800602 | 1.334752e-48 | -8.615850e-47 |
| Msa0132460 | Msa1258460 | 0.814573 | 1.438473e-51 | -8.615850e-47 |
| Msa0134580 | Msa1258460 | 0.851096 | 1.108819e-60 | -8.615850e-47 |
| Msa0178010 | Msa1258460 | 0.803303 | 3.717736e-49 | -8.615850e-47 |
| Msa0182050 | Msa1258460 | 0.819238 | 1.290097e-52 | -8.615850e-47 |
| Msa0228540 | Msa1258460 | 0.939278 | 1.663163e-99 | -8.615850e-47 |
| Msa1255830 | Msa1258460 | 0.827985 | 1.155769e-54 | -8.615850e-47 |
| Msa1255850 | Msa1258460 | 0.843636 | 1.240259e-58 | -8.615850e-47 |
| Msa1258460 | Msa1284060 | 0.825106 | 5.617968e-54 | -8.615850e-47 |
| Msa1258460 | Msa1296090 | 0.808858 | 2.519506e-50 | -8.615850e-47 |
| Msa1258460 | Msa1411380 | 0.802359 | 5.823011e-49 | -8.615850e-47 |
| Msa1258460 | Msa1419900 | 0.805275 | 1.444281e-49 | -8.615850e-47 |
| Msa1258460 | Msa1439870 | 0.806802 | 6.892429e-50 | -8.615850e-47 |
| Msa0374240 | Msa1258460 | 0.826439 | 2.710874e-54 | -8.615850e-47 |
| Msa0453530 | Msa1258460 | 0.800773 | 1.231567e-48 | -8.615850e-47 |
| Msa0469800 | Msa1258460 | 0.800198 | 1.612442e-48 | -8.615850e-47 |
| Msa0469810 | Msa1258460 | 0.801180 | 1.017027e-48 | -8.615850e-47 |
| Msa0475810 | Msa1258460 | 0.854266 | 1.380394e-61 | -8.615850e-47 |
| Msa0482260 | Msa1258460 | 0.945000 | 6.913029e-104 | -8.615850e-47 |
| Msa1025200 | Msa1258460 | 0.818386 | 2.013595e-52 | -8.615850e-47 |
| Msa1025220 | Msa1258460 | 0.800042 | 1.734766e-48 | -8.615850e-47 |
| Msa1050100 | Msa1258460 | 0.801791 | 7.620518e-49 | -8.615850e-47 |
| Msa1078080 | Msa1258460 | 0.804286 | 2.323488e-49 | -8.615850e-47 |
| Msa0304250 | Msa1258460 | 0.816378 | 5.703104e-52 | -8.615850e-47 |
| Msa1163660 | Msa1258460 | 0.804862 | 1.761754e-49 | -8.615850e-47 |
| Msa1191820 | Msa1258460 | 0.808835 | 2.548213e-50 | -8.615850e-47 |
| Msa1203560 | Msa1258460 | 0.817550 | 3.111400e-52 | -8.615850e-47 |
| Msa1218610 | Msa1258460 | 0.810565 | 1.082060e-50 | -8.615850e-47 |
| Msa0515360 | Msa1258460 | 0.813905 | 2.019933e-51 | -8.615850e-47 |
| Msa0529900 | Msa1258460 | 0.817545 | 3.119551e-52 | -8.615850e-47 |
| Msa0930100 | Msa1258460 | 0.800711 | 1.267802e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1258460 | MtrunA17_Chr4g0057681 | 87.500 | 480 | 31 | 4 | 1 | 453 | 1 | 478 | 0.0 | 833 |
| Msa1258460 | MtrunA17_Chr5g0418151 | 83.195 | 482 | 50 | 6 | 1 | 453 | 1 | 480 | 0.0 | 793 |
| Msa1258460 | MtrunA17_Chr3g0116191 | 69.231 | 481 | 116 | 6 | 1 | 453 | 1 | 477 | 0.0 | 675 |
| Msa1258460 | MtrunA17_Chr3g0116211 | 89.474 | 38 | 4 | 0 | 214 | 251 | 5 | 42 | 2.41e-20 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1258460 | AT4G24830.1 | 75.822 | 426 | 73 | 5 | 53 | 451 | 70 | 492 | 0.0 | 650 |
| Msa1258460 | AT4G24830.2 | 66.667 | 426 | 68 | 6 | 53 | 451 | 70 | 448 | 0.0 | 550 |
Find 141 sgRNAs with CRISPR-Local
Find 360 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAATTAAATCAACGCTTAA+AGG | 0.127774 | 8_2:-59655194 | None:intergenic |
| CATGATTTCTTGCAGATATT+TGG | 0.139184 | 8_2:+59654633 | Msa1258460:intron |
| ACACCAACTCTGCATATTTA+AGG | 0.172014 | 8_2:-59654912 | None:intergenic |
| TCAAGTCCTTTACGACTAAT+TGG | 0.184464 | 8_2:-59652598 | None:intergenic |
| TCTTGCAGATATTTGGAAAT+TGG | 0.199883 | 8_2:+59654640 | Msa1258460:intron |
| GTCACTAAAGGGTGATATTT+TGG | 0.204335 | 8_2:+59654178 | Msa1258460:intron |
| GCGTATTTGATTGCCTTAAA+AGG | 0.228384 | 8_2:+59655220 | Msa1258460:three_prime_UTR |
| ACGTAGCCCGCTACCCTTCT+TGG | 0.260980 | 8_2:-59651800 | None:intergenic |
| CAGAGAATATTCTGTTTAAT+CGG | 0.269629 | 8_2:+59651046 | Msa1258460:intron |
| CTGTAATGGTACACTGATTA+AGG | 0.270195 | 8_2:+59655420 | Msa1258460:three_prime_UTR |
| CATCATGTACATATCCTTCT+TGG | 0.285689 | 8_2:-59654219 | None:intergenic |
| TAATTGCGTGCGTGCGGCTT+TGG | 0.303374 | 8_2:-59650758 | None:intergenic |
| CTTAATCAGTGTACCATTAC+AGG | 0.310219 | 8_2:-59655419 | None:intergenic |
| ACTCCCGTGCTGCTTTAAAA+AGG | 0.317154 | 8_2:-59654837 | None:intergenic |
| AAAGCCGCACGCACGCAATT+AGG | 0.326522 | 8_2:+59650760 | Msa1258460:five_prime_UTR |
| TCTTGCCTATACAGGCTAAA+AGG | 0.329004 | 8_2:-59655066 | None:intergenic |
| CAAGTACTTCCTCTCATAAA+TGG | 0.334381 | 8_2:-59652669 | None:intergenic |
| CGTATAGGGTATAAAAGAAT+TGG | 0.348572 | 8_2:+59652538 | Msa1258460:intron |
| AAAGCACAACGTTCCCGTTC+CGG | 0.350464 | 8_2:+59653284 | Msa1258460:CDS |
| GACTAATTGGGAGGCTCCAC+TGG | 0.351872 | 8_2:-59652585 | None:intergenic |
| TTGGAAATTGGTATTGAGTC+TGG | 0.354536 | 8_2:+59654652 | Msa1258460:CDS |
| TAACCCATGTTCATTCAAAA+AGG | 0.356247 | 8_2:+59651080 | Msa1258460:CDS |
| CCCGCTACCCTTCTTGGCTT+CGG | 0.371984 | 8_2:-59651794 | None:intergenic |
| AGCATTGCCCGGACCTTCAT+TGG | 0.372630 | 8_2:-59655162 | None:intergenic |
| TCCTTCTTGGGTTCATTAGC+CGG | 0.373034 | 8_2:-59654206 | None:intergenic |
| TGGAGGGAGTGGGATATTAC+AGG | 0.373658 | 8_2:+59653234 | Msa1258460:CDS |
| ATATTCTGTTTAATCGGGTT+TGG | 0.378824 | 8_2:+59651052 | Msa1258460:CDS |
| TATAAAAGAATTGGACGGTT+TGG | 0.385364 | 8_2:+59652547 | Msa1258460:CDS |
| GGTCCGGGCAATGCTTGAAC+AGG | 0.385668 | 8_2:+59655170 | Msa1258460:CDS |
| TGGTGCTGCAGAGAGAATTA+TGG | 0.387537 | 8_2:+59652318 | Msa1258460:intron |
| GCTACGTGGAAAATTGAATA+AGG | 0.387753 | 8_2:+59651816 | Msa1258460:CDS |
| GGAGCCACAATGTTTAGCTT+GGG | 0.388294 | 8_2:-59653210 | None:intergenic |
| GTTCCTATCCCTGCTATAGA+TGG | 0.391675 | 8_2:-59653319 | None:intergenic |
| CGCAGTAATCTTCTGCATAA+AGG | 0.397397 | 8_2:-59654977 | None:intergenic |
| AAGATTACTGCGACCACAAC+AGG | 0.398632 | 8_2:+59654988 | Msa1258460:CDS |
| CAAGTCCTTTACGACTAATT+GGG | 0.405173 | 8_2:-59652597 | None:intergenic |
| ATGAGATATCTTGCCTATAC+AGG | 0.405421 | 8_2:-59655074 | None:intergenic |
| GGACTTCCCGTTTCACTCAA+TGG | 0.408949 | 8_2:+59654673 | Msa1258460:CDS |
| CACCAACTCTGCATATTTAA+GGG | 0.411511 | 8_2:-59654911 | None:intergenic |
| GTCGGTGCTGGTAGACTTCA+AGG | 0.424838 | 8_2:+59651209 | Msa1258460:CDS |
| ATAGGTGGAAAGCACGGAAT+TGG | 0.430346 | 8_2:+59654739 | Msa1258460:CDS |
| ACGGTCTTCCAATGAAGGTC+CGG | 0.434028 | 8_2:+59655154 | Msa1258460:CDS |
| TTCCTTTCCCTGTACACCCA+TGG | 0.439674 | 8_2:-59653050 | None:intergenic |
| ACTCCTTCCCTTCATGCAAC+AGG | 0.446702 | 8_2:+59650857 | Msa1258460:CDS |
| AGAGAATATTCTGTTTAATC+GGG | 0.449216 | 8_2:+59651047 | Msa1258460:intron |
| GTATTTCCTTGCTTGCGTGC+TGG | 0.449287 | 8_2:+59652644 | Msa1258460:CDS |
| AGTTGGTGTATGCTGGTAGA+TGG | 0.450417 | 8_2:+59654926 | Msa1258460:CDS |
| AGCTCAGCGAGTAAAGTTGC+TGG | 0.451716 | 8_2:-59654709 | None:intergenic |
| GCTGTCTCCCATGGGTGTAC+AGG | 0.452794 | 8_2:+59653042 | Msa1258460:CDS |
| TGGAGCCACAATGTTTAGCT+TGG | 0.467832 | 8_2:-59653211 | None:intergenic |
| GGAGCTGATGCTGTCTCCCA+TGG | 0.468989 | 8_2:+59653033 | Msa1258460:CDS |
| ATGGTTGAGAATAGGCTTGT+AGG | 0.469420 | 8_2:+59654772 | Msa1258460:CDS |
| AAAGGTTCTGTTACTGTAGC+AGG | 0.471477 | 8_2:+59655033 | Msa1258460:CDS |
| ATCATGTACATATCCTTCTT+GGG | 0.473196 | 8_2:-59654218 | None:intergenic |
| CTCGCTGAGCTCAATGAGAT+AGG | 0.474365 | 8_2:+59654721 | Msa1258460:CDS |
| GTCTTGCCATTGAGTGAAAC+GGG | 0.476700 | 8_2:-59654679 | None:intergenic |
| CGTCTTGCCATTGAGTGAAA+CGG | 0.482531 | 8_2:-59654680 | None:intergenic |
| GTTCTTGTTCACTTCACCAA+TGG | 0.484175 | 8_2:+59650793 | Msa1258460:exon |
| GCTTTACGGTCTTCCAATGA+AGG | 0.484315 | 8_2:+59655149 | Msa1258460:CDS |
| GCAAGATATCTCATCATTTG+AGG | 0.485368 | 8_2:+59655083 | Msa1258460:CDS |
| TTGTGGCTCCATGGAGGGAG+TGG | 0.488472 | 8_2:+59653223 | Msa1258460:CDS |
| TACAGGGAAAGGAAATGATC+AGG | 0.502638 | 8_2:+59653059 | Msa1258460:CDS |
| GTGTGCTTCACTGCTGATGT+TGG | 0.505167 | 8_2:+59652351 | Msa1258460:CDS |
| CGGTCTTCCAATGAAGGTCC+GGG | 0.505856 | 8_2:+59655155 | Msa1258460:CDS |
| TCCTTTCCCTGTACACCCAT+GGG | 0.506646 | 8_2:-59653049 | None:intergenic |
| GGCAGTATCACGCAGTCATA+CGG | 0.506933 | 8_2:+59651759 | Msa1258460:CDS |
| CCTTCTTGGGTTCATTAGCC+GGG | 0.507887 | 8_2:-59654205 | None:intergenic |
| ATTAGTCGTAAAGGACTTGA+AGG | 0.509453 | 8_2:+59652601 | Msa1258460:CDS |
| GTTGTACTTGCTTACAGTGG+TGG | 0.512883 | 8_2:+59651838 | Msa1258460:CDS |
| TTCATGACATGCAGTTGTAA+AGG | 0.514606 | 8_2:+59651738 | Msa1258460:intron |
| TATTCTCAACCATGTCGATC+CGG | 0.516319 | 8_2:-59654762 | None:intergenic |
| AGCTAAACATTGTGGCTCCA+TGG | 0.517704 | 8_2:+59653214 | Msa1258460:CDS |
| TCTGTTTAATCGGGTTTGGA+AGG | 0.518126 | 8_2:+59651056 | Msa1258460:CDS |
| GGATCGACATGGTTGAGAAT+AGG | 0.521327 | 8_2:+59654764 | Msa1258460:CDS |
| AATGCTTTCAACTGAGCCAT+TGG | 0.522346 | 8_2:-59650809 | None:intergenic |
| CAGTCATTGTCCCATGGTTG+AGG | 0.522691 | 8_2:+59651872 | Msa1258460:CDS |
| GAGCTGATGCTGTCTCCCAT+GGG | 0.524079 | 8_2:+59653034 | Msa1258460:CDS |
| CAAGATATCTCATCATTTGA+GGG | 0.524808 | 8_2:+59655084 | Msa1258460:CDS |
| AGGAGAACCTGTTGCATGAA+GGG | 0.528602 | 8_2:-59650864 | None:intergenic |
| CCAAGAGCTAGTGTCGGTGC+TGG | 0.529991 | 8_2:+59651197 | Msa1258460:CDS |
| GTAATATCCCACTCCCTCCA+TGG | 0.530801 | 8_2:-59653231 | None:intergenic |
| TGATCCACTTCGTGAGTCGA+TGG | 0.531316 | 8_2:+59654951 | Msa1258460:CDS |
| CGCGGAGTTTATGAAACTCC+TGG | 0.532888 | 8_2:+59654805 | Msa1258460:CDS |
| GGCCCTGTTCAAGCATTGCC+CGG | 0.533555 | 8_2:-59655173 | None:intergenic |
| GTGGATGTTGCTAAAGAAGT+TGG | 0.533691 | 8_2:+59653012 | Msa1258460:CDS |
| AGCCCTTAAATATGCAGAGT+TGG | 0.534651 | 8_2:+59654909 | Msa1258460:CDS |
| CTGTCTCCCATGGGTGTACA+GGG | 0.536193 | 8_2:+59653043 | Msa1258460:CDS |
| TCCCATGGGTGTACAGGGAA+AGG | 0.539361 | 8_2:+59653048 | Msa1258460:CDS |
| AGCCTCCCAATTAGTCGTAA+AGG | 0.540721 | 8_2:+59652592 | Msa1258460:CDS |
| AATCCATCTATAGCAGGGAT+AGG | 0.548987 | 8_2:+59653316 | Msa1258460:CDS |
| GTGGAAAGCACGGAATTGGC+CGG | 0.550439 | 8_2:+59654743 | Msa1258460:CDS |
| TGTTAACTGAGTACCTGTAA+TGG | 0.551049 | 8_2:+59655406 | Msa1258460:three_prime_UTR |
| TATGATCAAGCTGATGCTGC+TGG | 0.551145 | 8_2:+59655117 | Msa1258460:CDS |
| CCAGCACCGACACTAGCTCT+TGG | 0.552890 | 8_2:-59651197 | None:intergenic |
| AAGGAGAACCTGTTGCATGA+AGG | 0.558077 | 8_2:-59650865 | None:intergenic |
| GAGCCACAATGTTTAGCTTG+GGG | 0.558250 | 8_2:-59653209 | None:intergenic |
| ATAGCAGGGATAGGAACCTA+TGG | 0.560895 | 8_2:+59653325 | Msa1258460:CDS |
| CCCGGCTAATGAACCCAAGA+AGG | 0.563898 | 8_2:+59654205 | Msa1258460:CDS |
| TCCGAAGCCAAGAAGGGTAG+CGG | 0.564921 | 8_2:+59651793 | Msa1258460:CDS |
| CCGAAGCCAAGAAGGGTAGC+GGG | 0.565040 | 8_2:+59651794 | Msa1258460:CDS |
| TCATTGGAAGACCGTAAAGC+CGG | 0.568825 | 8_2:-59655146 | None:intergenic |
| GTAGTAGCGCATAGATGTGA+AGG | 0.570777 | 8_2:-59650833 | None:intergenic |
| CAAAGTAACAGAACCTGTTG+TGG | 0.572279 | 8_2:-59655001 | None:intergenic |
| TGAAGATTCCGAAGCCAAGA+AGG | 0.576232 | 8_2:+59651786 | Msa1258460:CDS |
| TATGCAGAGTTGGTGTATGC+TGG | 0.582525 | 8_2:+59654919 | Msa1258460:CDS |
| CAACATATATACCTCAACCA+TGG | 0.584663 | 8_2:-59651883 | None:intergenic |
| GAACCTGTTGCATGAAGGGA+AGG | 0.585609 | 8_2:-59650860 | None:intergenic |
| GCGTCCATCGACTCACGAAG+TGG | 0.588223 | 8_2:-59654955 | None:intergenic |
| AACATATATACCTCAACCAT+GGG | 0.591621 | 8_2:-59651882 | None:intergenic |
| CGGAATTGGCCGGATCGACA+TGG | 0.592013 | 8_2:+59654753 | Msa1258460:CDS |
| AAACATTGTGGCTCCATGGA+GGG | 0.593118 | 8_2:+59653218 | Msa1258460:CDS |
| ACTTGATCGAGAAACAATAC+AGG | 0.598769 | 8_2:+59654873 | Msa1258460:CDS |
| CCTCATGGCTAAGATGCCAT+AGG | 0.600016 | 8_2:-59653341 | None:intergenic |
| ATGGCACCAGCACGCAAGCA+AGG | 0.605414 | 8_2:-59652650 | None:intergenic |
| GAAGATTCCGAAGCCAAGAA+GGG | 0.607784 | 8_2:+59651787 | Msa1258460:CDS |
| TGTGGCTCCATGGAGGGAGT+GGG | 0.609883 | 8_2:+59653224 | Msa1258460:CDS |
| ACACATCAGTCATTGTCCCA+TGG | 0.619335 | 8_2:+59651866 | Msa1258460:CDS |
| GTCCTTTACGACTAATTGGG+AGG | 0.620171 | 8_2:-59652594 | None:intergenic |
| GTTACTTTGAAATTGTACAA+AGG | 0.620393 | 8_2:+59655015 | Msa1258460:CDS |
| TGCTGACTGGTAGGCCATGG+TGG | 0.621627 | 8_2:+59652993 | Msa1258460:intron |
| ACAACCTAATTGCGTGCGTG+CGG | 0.637398 | 8_2:-59650764 | None:intergenic |
| GTCCGGGCAATGCTTGAACA+GGG | 0.642826 | 8_2:+59655171 | Msa1258460:CDS |
| TAGGGTATAAAAGAATTGGA+CGG | 0.644179 | 8_2:+59652542 | Msa1258460:intron |
| GCTGAGCTCAATGAGATAGG+TGG | 0.646043 | 8_2:+59654724 | Msa1258460:CDS |
| AATGAGATAGGTGGAAAGCA+CGG | 0.647318 | 8_2:+59654733 | Msa1258460:CDS |
| TTCTTTAGCAACATCCACCA+TGG | 0.653712 | 8_2:-59653007 | None:intergenic |
| GAGTTTATGAAACTCCTGGT+GGG | 0.653894 | 8_2:+59654809 | Msa1258460:CDS |
| GGAGTTTATGAAACTCCTGG+TGG | 0.659690 | 8_2:+59654808 | Msa1258460:CDS |
| AGTCGTAAAGGACTTGAAGG+AGG | 0.661011 | 8_2:+59652604 | Msa1258460:CDS |
| GAAGCCAAAGCAAAAGCCAG+TGG | 0.662975 | 8_2:+59652569 | Msa1258460:CDS |
| CTTGTAGGCATGAAGAGCCG+CGG | 0.663600 | 8_2:+59654787 | Msa1258460:CDS |
| GAACCCCAAGCTAAACATTG+TGG | 0.664560 | 8_2:+59653206 | Msa1258460:CDS |
| AAGAAGGGTAGCGGGCTACG+TGG | 0.672202 | 8_2:+59651802 | Msa1258460:CDS |
| TAAACATTGTGGCTCCATGG+AGG | 0.674929 | 8_2:+59653217 | Msa1258460:CDS |
| AAGGTTGTACTTGCTTACAG+TGG | 0.676821 | 8_2:+59651835 | Msa1258460:CDS |
| GTATCACGCAGTCATACGGA+TGG | 0.685063 | 8_2:+59651763 | Msa1258460:CDS |
| GGAGGGAGTGGGATATTACA+GGG | 0.688013 | 8_2:+59653235 | Msa1258460:CDS |
| TTGAAACCAAGAGCTAGTGT+CGG | 0.691852 | 8_2:+59651191 | Msa1258460:CDS |
| GTGCTGGTGCCATTTATGAG+AGG | 0.694541 | 8_2:+59652660 | Msa1258460:CDS |
| CCTATGGCATCTTAGCCATG+AGG | 0.721010 | 8_2:+59653341 | Msa1258460:CDS |
| CAGGAGTTTCATAAACTCCG+CGG | 0.735124 | 8_2:-59654804 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATCTTATTTAATGATTT+TGG | + | chr8_2:59652298-59652317 | Msa1258460:intron | 10.0% |
| !!! | ATAAAACATTTTTTTTTTGA+GGG | - | chr8_2:59655288-59655307 | None:intergenic | 10.0% |
| !! | ATGTAATGAAAATCAATAAA+GGG | - | chr8_2:59650975-59650994 | None:intergenic | 15.0% |
| !! | AATGTAATGAAAATCAATAA+AGG | - | chr8_2:59650976-59650995 | None:intergenic | 15.0% |
| !!! | ATGTTTTAACTTAAAGAATA+TGG | - | chr8_2:59651444-59651463 | None:intergenic | 15.0% |
| !! | CAACATATAAAGAATAAAAT+TGG | - | chr8_2:59651565-59651584 | None:intergenic | 15.0% |
| !!! | CAATTTTATTCTTTATATGT+TGG | + | chr8_2:59651563-59651582 | Msa1258460:intron | 15.0% |
| !! | TAGAAAAATAAAAAAGAACA+AGG | - | chr8_2:59651909-59651928 | None:intergenic | 15.0% |
| !!! | GATAAAACATTTTTTTTTTG+AGG | - | chr8_2:59655289-59655308 | None:intergenic | 15.0% |
| !!! | TTATTTAAGTTTTGTTGTTT+AGG | + | chr8_2:59655311-59655330 | Msa1258460:three_prime_UTR | 15.0% |
| !! | TTAATGACATTCAAAAAATG+GGG | - | chr8_2:59650939-59650958 | None:intergenic | 20.0% |
| !! | GTTAATGACATTCAAAAAAT+GGG | - | chr8_2:59650940-59650959 | None:intergenic | 20.0% |
| !! | TGTTAATGACATTCAAAAAA+TGG | - | chr8_2:59650941-59650960 | None:intergenic | 20.0% |
| !! | ATCTAATCAATATAATCAAC+TGG | - | chr8_2:59651674-59651693 | None:intergenic | 20.0% |
| !! | TCTTTATTCAGAATATACAA+AGG | - | chr8_2:59651963-59651982 | None:intergenic | 20.0% |
| !!! | TGAGCATTCTTTAAAAAAAA+GGG | - | chr8_2:59652175-59652194 | None:intergenic | 20.0% |
| !! | AGAACAAATTATACAACAAT+AGG | - | chr8_2:59652272-59652291 | None:intergenic | 20.0% |
| !! | GTTATAAGATTGTAAATATC+CGG | + | chr8_2:59652450-59652469 | Msa1258460:intron | 20.0% |
| !! | TAACAAAATCAATTTCGTAT+AGG | + | chr8_2:59652523-59652542 | Msa1258460:intron | 20.0% |
| !! | AACAAAATCAATTTCGTATA+GGG | + | chr8_2:59652524-59652543 | Msa1258460:intron | 20.0% |
| !! | TCCATTCTTCAAATAATAAT+CGG | + | chr8_2:59652853-59652872 | Msa1258460:intron | 20.0% |
| !! | TTACAATTACTATGAAGAAA+TGG | - | chr8_2:59652911-59652930 | None:intergenic | 20.0% |
| !!! | TGATTTGTTTGTTTTTTCAT+TGG | + | chr8_2:59653426-59653445 | Msa1258460:intron | 20.0% |
| !!! | GATTTGTTTGTTTTTTCATT+GGG | + | chr8_2:59653427-59653446 | Msa1258460:intron | 20.0% |
| !!! | TTTTATAGACCATTCTTTAA+AGG | - | chr8_2:59653509-59653528 | None:intergenic | 20.0% |
| !! | ATTAAAGGACAACATTAATA+AGG | - | chr8_2:59653669-59653688 | None:intergenic | 20.0% |
| !! | TTCCAACAAAAGATAATTAA+AGG | - | chr8_2:59653684-59653703 | None:intergenic | 20.0% |
| !!! | TTTAATTATCTTTTGTTGGA+AGG | + | chr8_2:59653683-59653702 | Msa1258460:intron | 20.0% |
| !!! | TCTTTGAAGGAAAAAAATTA+TGG | + | chr8_2:59653892-59653911 | Msa1258460:intron | 20.0% |
| !!! | TTTCTGTTATGCTTTTAAAA+AGG | + | chr8_2:59654560-59654579 | Msa1258460:intron | 20.0% |
| !!! | TTCTGTTATGCTTTTAAAAA+GGG | + | chr8_2:59654561-59654580 | Msa1258460:intron | 20.0% |
| !!! | TCATTCTTTTATTAAAGTTG+AGG | - | chr8_2:59655382-59655401 | None:intergenic | 20.0% |
| ! | CAGAGAATATTCTGTTTAAT+CGG | + | chr8_2:59651046-59651065 | Msa1258460:intron | 25.0% |
| ! | AGAGAATATTCTGTTTAATC+GGG | + | chr8_2:59651047-59651066 | Msa1258460:intron | 25.0% |
| ! | CAACTACACAGATTAAAAAA+GGG | - | chr8_2:59651174-59651193 | None:intergenic | 25.0% |
| ! | TCAACTACACAGATTAAAAA+AGG | - | chr8_2:59651175-59651194 | None:intergenic | 25.0% |
| ! | ATTGCATGATTTATAAACCA+TGG | + | chr8_2:59651274-59651293 | Msa1258460:intron | 25.0% |
| ! | AAGAATATGGTTTCAAATTG+CGG | - | chr8_2:59651431-59651450 | None:intergenic | 25.0% |
| ! | CATAATTATTCAATAGCATG+TGG | + | chr8_2:59651461-59651480 | Msa1258460:intron | 25.0% |
| ! | ATTCAACTACAAAGAACAAT+AGG | - | chr8_2:59651492-59651511 | None:intergenic | 25.0% |
| !! | TTAAGATTTAAGACCTTATC+AGG | + | chr8_2:59651519-59651538 | Msa1258460:intron | 25.0% |
| ! | CTTTATATGTTGGAAATGAA+TGG | + | chr8_2:59651573-59651592 | Msa1258460:intron | 25.0% |
| ! | CATTAGACTTAACTATCAAA+CGG | - | chr8_2:59651698-59651717 | None:intergenic | 25.0% |
| !! | CTGAGCATTCTTTAAAAAAA+AGG | - | chr8_2:59652176-59652195 | None:intergenic | 25.0% |
| ! | AACAATAGGTAACTTCAAAA+TGG | - | chr8_2:59652258-59652277 | None:intergenic | 25.0% |
| !!! | TACGAAATTGATTTTGTTAC+CGG | - | chr8_2:59652522-59652541 | None:intergenic | 25.0% |
| ! | ACCGATTATTATTTGAAGAA+TGG | - | chr8_2:59652857-59652876 | None:intergenic | 25.0% |
| ! | AAAAAAATCCATCTATAGCA+GGG | + | chr8_2:59653311-59653330 | Msa1258460:CDS | 25.0% |
| ! | TCTAATAGATCTATAGATTC+TGG | + | chr8_2:59653568-59653587 | Msa1258460:intron | 25.0% |
| ! | CTAATAGATCTATAGATTCT+GGG | + | chr8_2:59653569-59653588 | Msa1258460:intron | 25.0% |
| !! | GTCCTTTAATTATCTTTTGT+TGG | + | chr8_2:59653679-59653698 | Msa1258460:intron | 25.0% |
| ! | AACAGATAGACAAAATGATA+TGG | + | chr8_2:59653812-59653831 | Msa1258460:intron | 25.0% |
| ! | ACAGATAGACAAAATGATAT+GGG | + | chr8_2:59653813-59653832 | Msa1258460:intron | 25.0% |
| ! | AGATCATATGAATCTTCAAA+GGG | + | chr8_2:59654003-59654022 | Msa1258460:intron | 25.0% |
| !! | TGTCTGAAATTGTTTATCTT+TGG | + | chr8_2:59654116-59654135 | Msa1258460:intron | 25.0% |
| !! | GTCTGAAATTGTTTATCTTT+GGG | + | chr8_2:59654117-59654136 | Msa1258460:intron | 25.0% |
| ! | CTATTAACTAATGATCTGTT+TGG | + | chr8_2:59654298-59654317 | Msa1258460:intron | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | + | chr8_2:59654512-59654531 | Msa1258460:intron | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+GGG | + | chr8_2:59654513-59654532 | Msa1258460:intron | 25.0% |
| ! | TTGAAGCTGTATATATAGTT+GGG | - | chr8_2:59654539-59654558 | None:intergenic | 25.0% |
| !!! | GTTACTTTGAAATTGTACAA+AGG | + | chr8_2:59655015-59655034 | Msa1258460:CDS | 25.0% |
| ! | GAAATTAAATCAACGCTTAA+AGG | - | chr8_2:59655197-59655216 | None:intergenic | 25.0% |
| !!! | AAGTTTTGTTGTTTAGGAAT+TGG | + | chr8_2:59655317-59655336 | Msa1258460:three_prime_UTR | 25.0% |
| !!! | TAGTAGTTTTGAATTGTTAG+CGG | + | chr8_2:59655352-59655371 | Msa1258460:three_prime_UTR | 25.0% |
| ATATTCTGTTTAATCGGGTT+TGG | + | chr8_2:59651052-59651071 | Msa1258460:CDS | 30.0% | |
| TAACCCATGTTCATTCAAAA+AGG | + | chr8_2:59651080-59651099 | Msa1258460:CDS | 30.0% | |
| ! | TCACCTTTTTGAATGAACAT+GGG | - | chr8_2:59651086-59651105 | None:intergenic | 30.0% |
| ! | ATCACCTTTTTGAATGAACA+TGG | - | chr8_2:59651087-59651106 | None:intergenic | 30.0% |
| ! | AATCCACATACAGTTTTCAA+TGG | - | chr8_2:59651257-59651276 | None:intergenic | 30.0% |
| ATACAAAGGTTCACAAAGAA+CGG | - | chr8_2:59651331-59651350 | None:intergenic | 30.0% | |
| ! | CCTCAACATCTTTTATATTG+CGG | + | chr8_2:59651398-59651417 | Msa1258460:intron | 30.0% |
| TTGAAAGTGGATAAATTCAG+TGG | + | chr8_2:59651632-59651651 | Msa1258460:intron | 30.0% | |
| AACATATATACCTCAACCAT+GGG | - | chr8_2:59651885-59651904 | None:intergenic | 30.0% | |
| ATTCAGAATATACAAAGGAG+AGG | - | chr8_2:59651958-59651977 | None:intergenic | 30.0% | |
| AAAGAATGCTCAGTAATTTG+AGG | + | chr8_2:59651978-59651997 | Msa1258460:intron | 30.0% | |
| AAGAATGCTCAGTAATTTGA+GGG | + | chr8_2:59651979-59651998 | Msa1258460:intron | 30.0% | |
| TTGAAAAGTAACGACATACT+TGG | - | chr8_2:59652377-59652396 | None:intergenic | 30.0% | |
| CATGATTATGCTGTCTAAAT+TGG | + | chr8_2:59652413-59652432 | Msa1258460:intron | 30.0% | |
| ATGCTGTCTAAATTGGTTAT+TGG | + | chr8_2:59652420-59652439 | Msa1258460:intron | 30.0% | |
| TCTAAATTGGTTATTGGAAG+AGG | + | chr8_2:59652426-59652445 | Msa1258460:intron | 30.0% | |
| CGTATAGGGTATAAAAGAAT+TGG | + | chr8_2:59652538-59652557 | Msa1258460:intron | 30.0% | |
| TAGGGTATAAAAGAATTGGA+CGG | + | chr8_2:59652542-59652561 | Msa1258460:intron | 30.0% | |
| TATAAAAGAATTGGACGGTT+TGG | + | chr8_2:59652547-59652566 | Msa1258460:CDS | 30.0% | |
| ATTACTATGAAGAAATGGCA+CGG | - | chr8_2:59652906-59652925 | None:intergenic | 30.0% | |
| ATTGTAATTGACGATGATAG+TGG | + | chr8_2:59652924-59652943 | Msa1258460:intron | 30.0% | |
| !!! | TAGATGGATTTTTTTGTCAC+CGG | - | chr8_2:59653306-59653325 | None:intergenic | 30.0% |
| CAAAAAAATCCATCTATAGC+AGG | + | chr8_2:59653310-59653329 | Msa1258460:CDS | 30.0% | |
| ! | CTAGTTGTAGTGTTGAATAT+TGG | + | chr8_2:59653393-59653412 | Msa1258460:intron | 30.0% |
| CTTGTCTGCTATTGAATTTA+AGG | + | chr8_2:59653451-59653470 | Msa1258460:intron | 30.0% | |
| TCCTTTCAAAGTAATAGAGT+TGG | + | chr8_2:59653482-59653501 | Msa1258460:intron | 30.0% | |
| ACCAACTCTATTACTTTGAA+AGG | - | chr8_2:59653486-59653505 | None:intergenic | 30.0% | |
| CTAAAGTAAAGACATTTGTG+TGG | - | chr8_2:59653619-59653638 | None:intergenic | 30.0% | |
| ! | TAAGGAACTAAATTGATGAC+TGG | - | chr8_2:59653651-59653670 | None:intergenic | 30.0% |
| GTATATTAGCATCCTTTAGA+CGG | - | chr8_2:59653709-59653728 | None:intergenic | 30.0% | |
| CCATCTAACAAACATTAATG+TGG | - | chr8_2:59653776-59653795 | None:intergenic | 30.0% | |
| ! | CCACATTAATGTTTGTTAGA+TGG | + | chr8_2:59653773-59653792 | Msa1258460:intron | 30.0% |
| ATCTGTTACAGAATGAATGA+AGG | - | chr8_2:59653799-59653818 | None:intergenic | 30.0% | |
| CAGATAGACAAAATGATATG+GGG | + | chr8_2:59653814-59653833 | Msa1258460:intron | 30.0% | |
| ! | GAAATCCTATCATTTGTTAC+CGG | + | chr8_2:59653973-59653992 | Msa1258460:intron | 30.0% |
| GAGATCATATGAATCTTCAA+AGG | + | chr8_2:59654002-59654021 | Msa1258460:intron | 30.0% | |
| !! | GCTTATCTTTAGTTTGATCT+AGG | + | chr8_2:59654065-59654084 | Msa1258460:intron | 30.0% |
| ATCATGTACATATCCTTCTT+GGG | - | chr8_2:59654221-59654240 | None:intergenic | 30.0% | |
| TAGTTAATAGAACCATGAGA+AGG | - | chr8_2:59654288-59654307 | None:intergenic | 30.0% | |
| AACTAATGATCTGTTTGGAT+TGG | + | chr8_2:59654303-59654322 | Msa1258460:intron | 30.0% | |
| ! | GCTTGTTTGAGTTTATTTAC+TGG | + | chr8_2:59654325-59654344 | Msa1258460:intron | 30.0% |
| !! | AGTAAGCTAAAAGCATCTTA+TGG | - | chr8_2:59654406-59654425 | None:intergenic | 30.0% |
| CTTGAAGCTGTATATATAGT+TGG | - | chr8_2:59654540-59654559 | None:intergenic | 30.0% | |
| GTGTGCTTTCAAAAAATGTA+AGG | - | chr8_2:59654614-59654633 | None:intergenic | 30.0% | |
| CATGATTTCTTGCAGATATT+TGG | + | chr8_2:59654633-59654652 | Msa1258460:intron | 30.0% | |
| TCTTGCAGATATTTGGAAAT+TGG | + | chr8_2:59654640-59654659 | Msa1258460:intron | 30.0% | |
| CAAGATATCTCATCATTTGA+GGG | + | chr8_2:59655084-59655103 | Msa1258460:CDS | 30.0% | |
| ! | AAACAAAGCATGTCCTTTTA+AGG | - | chr8_2:59655236-59655255 | None:intergenic | 30.0% |
| GATCCATTGAAAACTGTATG+TGG | + | chr8_2:59651251-59651270 | Msa1258460:intron | 35.0% | |
| TATAAACCATGGTGAATCTG+TGG | + | chr8_2:59651285-59651304 | Msa1258460:intron | 35.0% | |
| TTAAAACCACAGATTCACCA+TGG | - | chr8_2:59651294-59651313 | None:intergenic | 35.0% | |
| !!! | GAATCTGTGGTTTTAAACTG+CGG | + | chr8_2:59651298-59651317 | Msa1258460:intron | 35.0% |
| CTTTGTATTGCAGCGATATT+CGG | + | chr8_2:59651343-59651362 | Msa1258460:intron | 35.0% | |
| CCGCAATATAAAAGATGTTG+AGG | - | chr8_2:59651401-59651420 | None:intergenic | 35.0% | |
| ! | CATCTTTTATATTGCGGTTG+CGG | + | chr8_2:59651404-59651423 | Msa1258460:intron | 35.0% |
| CATCACGTTAATACCTGATA+AGG | - | chr8_2:59651535-59651554 | None:intergenic | 35.0% | |
| AAAGTGGATAAATTCAGTGG+AGG | + | chr8_2:59651635-59651654 | Msa1258460:intron | 35.0% | |
| TTCATGACATGCAGTTGTAA+AGG | + | chr8_2:59651738-59651757 | Msa1258460:intron | 35.0% | |
| GCTACGTGGAAAATTGAATA+AGG | + | chr8_2:59651816-59651835 | Msa1258460:CDS | 35.0% | |
| CAACATATATACCTCAACCA+TGG | - | chr8_2:59651886-59651905 | None:intergenic | 35.0% | |
| AGAATGCTCAGTAATTTGAG+GGG | + | chr8_2:59651980-59651999 | Msa1258460:intron | 35.0% | |
| !!! | TTACCCTGTTTTTACACAAG+AGG | - | chr8_2:59652076-59652095 | None:intergenic | 35.0% |
| TCTTGTGTAAAAACAGGGTA+AGG | + | chr8_2:59652075-59652094 | Msa1258460:intron | 35.0% | |
| ! | CTTTAAAAAAAAGGGCAACC+CGG | - | chr8_2:59652167-59652186 | None:intergenic | 35.0% |
| AGAGATGTAGTTTAATCGAG+TGG | + | chr8_2:59652209-59652228 | Msa1258460:intron | 35.0% | |
| TGTAGTTTAATCGAGTGGAA+TGG | + | chr8_2:59652214-59652233 | Msa1258460:intron | 35.0% | |
| GTAGTTTAATCGAGTGGAAT+GGG | + | chr8_2:59652215-59652234 | Msa1258460:intron | 35.0% | |
| CTGAGTAAAACAAATTCTCC+TGG | - | chr8_2:59652476-59652495 | None:intergenic | 35.0% | |
| CAAGTCCTTTACGACTAATT+GGG | - | chr8_2:59652600-59652619 | None:intergenic | 35.0% | |
| TCAAGTCCTTTACGACTAAT+TGG | - | chr8_2:59652601-59652620 | None:intergenic | 35.0% | |
| ATTAGTCGTAAAGGACTTGA+AGG | + | chr8_2:59652601-59652620 | Msa1258460:CDS | 35.0% | |
| CAAGTACTTCCTCTCATAAA+TGG | - | chr8_2:59652672-59652691 | None:intergenic | 35.0% | |
| !! | CTGTAATTGCAAAGGTACTT+CGG | + | chr8_2:59652714-59652733 | Msa1258460:intron | 35.0% |
| !! | GTGCTTTTTAGCATACTCAA+TGG | - | chr8_2:59653271-59653290 | None:intergenic | 35.0% |
| ! | AGAGTTGGTCCTTTAAAGAA+TGG | + | chr8_2:59653497-59653516 | Msa1258460:intron | 35.0% |
| TATACATGTGTCTGCATGTT+TGG | + | chr8_2:59653724-59653743 | Msa1258460:intron | 35.0% | |
| GATGACACTTGAATCTTTGA+AGG | + | chr8_2:59653879-59653898 | Msa1258460:intron | 35.0% | |
| TTCATATGATCTCTTGAGAC+CGG | - | chr8_2:59653995-59654014 | None:intergenic | 35.0% | |
| ! | TATGCAATCTGTGTCACTAA+AGG | + | chr8_2:59654166-59654185 | Msa1258460:intron | 35.0% |
| ! | ATGCAATCTGTGTCACTAAA+GGG | + | chr8_2:59654167-59654186 | Msa1258460:intron | 35.0% |
| ! | GTCACTAAAGGGTGATATTT+TGG | + | chr8_2:59654178-59654197 | Msa1258460:intron | 35.0% |
| CATCATGTACATATCCTTCT+TGG | - | chr8_2:59654222-59654241 | None:intergenic | 35.0% | |
| GCATCTTATGGACATATCAT+AGG | - | chr8_2:59654394-59654413 | None:intergenic | 35.0% | |
| !! | AGGGTGCTTACTATTGTTTT+TGG | + | chr8_2:59654580-59654599 | Msa1258460:intron | 35.0% |
| ! | TTGGAAATTGGTATTGAGTC+TGG | + | chr8_2:59654652-59654671 | Msa1258460:CDS | 35.0% |
| !!! | CTATCCTTTTTAAAGCAGCA+CGG | + | chr8_2:59654833-59654852 | Msa1258460:CDS | 35.0% |
| !!! | TATCCTTTTTAAAGCAGCAC+GGG | + | chr8_2:59654834-59654853 | Msa1258460:CDS | 35.0% |
| ACTTGATCGAGAAACAATAC+AGG | + | chr8_2:59654873-59654892 | Msa1258460:CDS | 35.0% | |
| CACCAACTCTGCATATTTAA+GGG | - | chr8_2:59654914-59654933 | None:intergenic | 35.0% | |
| ACACCAACTCTGCATATTTA+AGG | - | chr8_2:59654915-59654934 | None:intergenic | 35.0% | |
| ATGAGATATCTTGCCTATAC+AGG | - | chr8_2:59655077-59655096 | None:intergenic | 35.0% | |
| GCAAGATATCTCATCATTTG+AGG | + | chr8_2:59655083-59655102 | Msa1258460:CDS | 35.0% | |
| GCGTATTTGATTGCCTTAAA+AGG | + | chr8_2:59655220-59655239 | Msa1258460:three_prime_UTR | 35.0% | |
| TGTTAACTGAGTACCTGTAA+TGG | + | chr8_2:59655406-59655425 | Msa1258460:three_prime_UTR | 35.0% | |
| CTTAATCAGTGTACCATTAC+AGG | - | chr8_2:59655422-59655441 | None:intergenic | 35.0% | |
| ! | CTGTAATGGTACACTGATTA+AGG | + | chr8_2:59655420-59655439 | Msa1258460:three_prime_UTR | 35.0% |
| GTTCTTGTTCACTTCACCAA+TGG | + | chr8_2:59650793-59650812 | Msa1258460:exon | 40.0% | |
| AATGCTTTCAACTGAGCCAT+TGG | - | chr8_2:59650812-59650831 | None:intergenic | 40.0% | |
| AGAGAGCGAAATGAAAACGA+AGG | - | chr8_2:59650887-59650906 | None:intergenic | 40.0% | |
| TCTGTTTAATCGGGTTTGGA+AGG | + | chr8_2:59651056-59651075 | Msa1258460:CDS | 40.0% | |
| TTGAAACCAAGAGCTAGTGT+CGG | + | chr8_2:59651191-59651210 | Msa1258460:CDS | 40.0% | |
| CGAATATCGCTGCAATACAA+AGG | - | chr8_2:59651345-59651364 | None:intergenic | 40.0% | |
| GCGATATTCGGTCAAAATTG+TGG | + | chr8_2:59651355-59651374 | Msa1258460:intron | 40.0% | |
| ! | ATTTGCGTCGATGTTGAAAG+TGG | + | chr8_2:59651619-59651638 | Msa1258460:intron | 40.0% |
| AAGGTTGTACTTGCTTACAG+TGG | + | chr8_2:59651835-59651854 | Msa1258460:CDS | 40.0% | |
| AGAGGATTGTGAACTTGTGA+TGG | - | chr8_2:59651940-59651959 | None:intergenic | 40.0% | |
| AGTAATTTGAGGGGTAACCT+TGG | + | chr8_2:59651989-59652008 | Msa1258460:intron | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | + | chr8_2:59652069-59652088 | Msa1258460:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | + | chr8_2:59652070-59652089 | Msa1258460:intron | 40.0% | |
| AAGATTGTAAATATCCGGCC+AGG | + | chr8_2:59652455-59652474 | Msa1258460:intron | 40.0% | |
| GTAAAACAAATTCTCCTGGC+CGG | - | chr8_2:59652472-59652491 | None:intergenic | 40.0% | |
| TTGTTGATGTGCTACATGTC+CGG | + | chr8_2:59652500-59652519 | Msa1258460:intron | 40.0% | |
| !! | TATGAGAGGAAGTACTTGCT+TGG | + | chr8_2:59652674-59652693 | Msa1258460:intron | 40.0% |
| !! | ATGAGAGGAAGTACTTGCTT+GGG | + | chr8_2:59652675-59652694 | Msa1258460:intron | 40.0% |
| TACCTTTGCAATTACAGGAC+GGG | - | chr8_2:59652711-59652730 | None:intergenic | 40.0% | |
| GTACCTTTGCAATTACAGGA+CGG | - | chr8_2:59652712-59652731 | None:intergenic | 40.0% | |
| ! | CGAAGTACCTTTGCAATTAC+AGG | - | chr8_2:59652716-59652735 | None:intergenic | 40.0% |
| !! | CCTTTAATCTGAAGTGTTGG+GGG | - | chr8_2:59652758-59652777 | None:intergenic | 40.0% |
| !! | GCCTTTAATCTGAAGTGTTG+GGG | - | chr8_2:59652759-59652778 | None:intergenic | 40.0% |
| ! | CGCCTTTAATCTGAAGTGTT+GGG | - | chr8_2:59652760-59652779 | None:intergenic | 40.0% |
| ! | ACGCCTTTAATCTGAAGTGT+TGG | - | chr8_2:59652761-59652780 | None:intergenic | 40.0% |
| GTCAGTGTAAAACACTGACA+CGG | - | chr8_2:59652799-59652818 | None:intergenic | 40.0% | |
| ATACTTATCCACCGTATCTG+TGG | + | chr8_2:59652950-59652969 | Msa1258460:intron | 40.0% | |
| CAGTACAACAACCACAGATA+CGG | - | chr8_2:59652964-59652983 | None:intergenic | 40.0% | |
| TTCTTTAGCAACATCCACCA+TGG | - | chr8_2:59653010-59653029 | None:intergenic | 40.0% | |
| GTGGATGTTGCTAAAGAAGT+TGG | + | chr8_2:59653012-59653031 | Msa1258460:CDS | 40.0% | |
| TACAGGGAAAGGAAATGATC+AGG | + | chr8_2:59653059-59653078 | Msa1258460:CDS | 40.0% | |
| !!! | GATTTTTTTGTCACCGGAAC+GGG | - | chr8_2:59653300-59653319 | None:intergenic | 40.0% |
| !!! | GGATTTTTTTGTCACCGGAA+CGG | - | chr8_2:59653301-59653320 | None:intergenic | 40.0% |
| AATCCATCTATAGCAGGGAT+AGG | + | chr8_2:59653316-59653335 | Msa1258460:CDS | 40.0% | |
| TAACCACAAAGCATACCTCA+TGG | - | chr8_2:59653359-59653378 | None:intergenic | 40.0% | |
| CTACAACTAGAGCTAGATTG+AGG | - | chr8_2:59653383-59653402 | None:intergenic | 40.0% | |
| ! | TGCATGTTTGGAAGCACATA+TGG | + | chr8_2:59653736-59653755 | Msa1258460:intron | 40.0% |
| ! | GCATGTTTGGAAGCACATAT+GGG | + | chr8_2:59653737-59653756 | Msa1258460:intron | 40.0% |
| CAAACATTAATGTGGTGCGT+AGG | - | chr8_2:59653768-59653787 | None:intergenic | 40.0% | |
| ATGATATGGGGTCACTAAAC+TGG | + | chr8_2:59653826-59653845 | Msa1258460:intron | 40.0% | |
| TGAGACCGGTAACAAATGAT+AGG | - | chr8_2:59653981-59654000 | None:intergenic | 40.0% | |
| TAAACACCTGTGAGACTCTT+TGG | + | chr8_2:59654350-59654369 | Msa1258460:intron | 40.0% | |
| AAACACCTGTGAGACTCTTT+GGG | + | chr8_2:59654351-59654370 | Msa1258460:intron | 40.0% | |
| CTTACTTCCATAAGCTCTCA+AGG | + | chr8_2:59654420-59654439 | Msa1258460:intron | 40.0% | |
| AAGCTATCCTTGAGAGCTTA+TGG | - | chr8_2:59654430-59654449 | None:intergenic | 40.0% | |
| ATATATAGTTGGGCCCTGTT+TGG | - | chr8_2:59654529-59654548 | None:intergenic | 40.0% | |
| AATGAGATAGGTGGAAAGCA+CGG | + | chr8_2:59654733-59654752 | Msa1258460:CDS | 40.0% | |
| TATTCTCAACCATGTCGATC+CGG | - | chr8_2:59654765-59654784 | None:intergenic | 40.0% | |
| ATGGTTGAGAATAGGCTTGT+AGG | + | chr8_2:59654772-59654791 | Msa1258460:CDS | 40.0% | |
| GAGTTTATGAAACTCCTGGT+GGG | + | chr8_2:59654809-59654828 | Msa1258460:CDS | 40.0% | |
| TTAAAAAGGATAGTCCCACC+AGG | - | chr8_2:59654826-59654845 | None:intergenic | 40.0% | |
| AGCCCTTAAATATGCAGAGT+TGG | + | chr8_2:59654909-59654928 | Msa1258460:CDS | 40.0% | |
| CGCAGTAATCTTCTGCATAA+AGG | - | chr8_2:59654980-59654999 | None:intergenic | 40.0% | |
| CAAAGTAACAGAACCTGTTG+TGG | - | chr8_2:59655004-59655023 | None:intergenic | 40.0% | |
| AAAGGTTCTGTTACTGTAGC+AGG | + | chr8_2:59655033-59655052 | Msa1258460:CDS | 40.0% | |
| ! | AGAGTCCTTTTAGCCTGTAT+AGG | + | chr8_2:59655061-59655080 | Msa1258460:CDS | 40.0% |
| TCTTGCCTATACAGGCTAAA+AGG | - | chr8_2:59655069-59655088 | None:intergenic | 40.0% | |
| GTAGTAGCGCATAGATGTGA+AGG | - | chr8_2:59650836-59650855 | None:intergenic | 45.0% | |
| AGGAGAACCTGTTGCATGAA+GGG | - | chr8_2:59650867-59650886 | None:intergenic | 45.0% | |
| AAGGAGAACCTGTTGCATGA+AGG | - | chr8_2:59650868-59650887 | None:intergenic | 45.0% | |
| TGAAGATTCCGAAGCCAAGA+AGG | + | chr8_2:59651786-59651805 | Msa1258460:CDS | 45.0% | |
| GAAGATTCCGAAGCCAAGAA+GGG | + | chr8_2:59651787-59651806 | Msa1258460:CDS | 45.0% | |
| GTTGTACTTGCTTACAGTGG+TGG | + | chr8_2:59651838-59651857 | Msa1258460:CDS | 45.0% | |
| ACACATCAGTCATTGTCCCA+TGG | + | chr8_2:59651866-59651885 | Msa1258460:CDS | 45.0% | |
| GTTGTTGTCATGTGACCGTA+AGG | + | chr8_2:59652025-59652044 | Msa1258460:intron | 45.0% | |
| TCATGTGACCGTAAGGTCAT+GGG | + | chr8_2:59652032-59652051 | Msa1258460:intron | 45.0% | |
| GACTTGAACCCATGACCTTA+CGG | - | chr8_2:59652043-59652062 | None:intergenic | 45.0% | |
| ! | TTACACAAGAGGCTGTTTCC+AGG | - | chr8_2:59652065-59652084 | None:intergenic | 45.0% |
| CGTGCAATACACCAAATGGT+GGG | + | chr8_2:59652101-59652120 | Msa1258460:intron | 45.0% | |
| !! | TGGTGCTGCAGAGAGAATTA+TGG | + | chr8_2:59652318-59652337 | Msa1258460:intron | 45.0% |
| AGCCTCCCAATTAGTCGTAA+AGG | + | chr8_2:59652592-59652611 | Msa1258460:CDS | 45.0% | |
| GTCCTTTACGACTAATTGGG+AGG | - | chr8_2:59652597-59652616 | None:intergenic | 45.0% | |
| AGTCGTAAAGGACTTGAAGG+AGG | + | chr8_2:59652604-59652623 | Msa1258460:CDS | 45.0% | |
| CCCCCAACACTTCAGATTAA+AGG | + | chr8_2:59652755-59652774 | Msa1258460:intron | 45.0% | |
| GTAAAACACTGACACGGTGT+TGG | - | chr8_2:59652793-59652812 | None:intergenic | 45.0% | |
| TGACATGTCCGTGTTATGTC+CGG | + | chr8_2:59652877-59652896 | Msa1258460:intron | 45.0% | |
| TACAACAACCACAGATACGG+TGG | - | chr8_2:59652961-59652980 | None:intergenic | 45.0% | |
| GAACCCCAAGCTAAACATTG+TGG | + | chr8_2:59653206-59653225 | Msa1258460:CDS | 45.0% | |
| !! | GAGCCACAATGTTTAGCTTG+GGG | - | chr8_2:59653212-59653231 | None:intergenic | 45.0% |
| ! | GGAGCCACAATGTTTAGCTT+GGG | - | chr8_2:59653213-59653232 | None:intergenic | 45.0% |
| TGGAGCCACAATGTTTAGCT+TGG | - | chr8_2:59653214-59653233 | None:intergenic | 45.0% | |
| AGCTAAACATTGTGGCTCCA+TGG | + | chr8_2:59653214-59653233 | Msa1258460:CDS | 45.0% | |
| TAAACATTGTGGCTCCATGG+AGG | + | chr8_2:59653217-59653236 | Msa1258460:CDS | 45.0% | |
| AAACATTGTGGCTCCATGGA+GGG | + | chr8_2:59653218-59653237 | Msa1258460:CDS | 45.0% | |
| GTTCCTATCCCTGCTATAGA+TGG | - | chr8_2:59653322-59653341 | None:intergenic | 45.0% | |
| ATAGCAGGGATAGGAACCTA+TGG | + | chr8_2:59653325-59653344 | Msa1258460:CDS | 45.0% | |
| TAGCCATGAGGTATGCTTTG+TGG | + | chr8_2:59653353-59653372 | Msa1258460:intron | 45.0% | |
| TTTGTTGGAAGGCCGTCTAA+AGG | + | chr8_2:59653694-59653713 | Msa1258460:intron | 45.0% | |
| !! | GGGTGATATTTTGGAAGACC+CGG | + | chr8_2:59654187-59654206 | Msa1258460:intron | 45.0% |
| TCCTTCTTGGGTTCATTAGC+CGG | - | chr8_2:59654209-59654228 | None:intergenic | 45.0% | |
| GTACATGATGTCTGTAGACC+CGG | + | chr8_2:59654232-59654251 | Msa1258460:intron | 45.0% | |
| GAAGCTTACTCTGCTTGATC+TGG | - | chr8_2:59654266-59654285 | None:intergenic | 45.0% | |
| CAGAGTAAGCTTCCTTCTCA+TGG | + | chr8_2:59654273-59654292 | Msa1258460:intron | 45.0% | |
| GTCTTGCCATTGAGTGAAAC+GGG | - | chr8_2:59654682-59654701 | None:intergenic | 45.0% | |
| CGTCTTGCCATTGAGTGAAA+CGG | - | chr8_2:59654683-59654702 | None:intergenic | 45.0% | |
| ! | ATAGGTGGAAAGCACGGAAT+TGG | + | chr8_2:59654739-59654758 | Msa1258460:CDS | 45.0% |
| GGATCGACATGGTTGAGAAT+AGG | + | chr8_2:59654764-59654783 | Msa1258460:CDS | 45.0% | |
| CAGGAGTTTCATAAACTCCG+CGG | - | chr8_2:59654807-59654826 | None:intergenic | 45.0% | |
| GGAGTTTATGAAACTCCTGG+TGG | + | chr8_2:59654808-59654827 | Msa1258460:CDS | 45.0% | |
| !! | ACTCCCGTGCTGCTTTAAAA+AGG | - | chr8_2:59654840-59654859 | None:intergenic | 45.0% |
| !!! | TTTTAAAGCAGCACGGGAGT+TGG | + | chr8_2:59654840-59654859 | Msa1258460:CDS | 45.0% |
| !! | TATGCAGAGTTGGTGTATGC+TGG | + | chr8_2:59654919-59654938 | Msa1258460:CDS | 45.0% |
| ! | AGTTGGTGTATGCTGGTAGA+TGG | + | chr8_2:59654926-59654945 | Msa1258460:CDS | 45.0% |
| AAGATTACTGCGACCACAAC+AGG | + | chr8_2:59654988-59655007 | Msa1258460:CDS | 45.0% | |
| TATGATCAAGCTGATGCTGC+TGG | + | chr8_2:59655117-59655136 | Msa1258460:CDS | 45.0% | |
| !!! | CTGATGCTGCTGGTTTTATC+CGG | + | chr8_2:59655127-59655146 | Msa1258460:CDS | 45.0% |
| !!! | GCTGGTTTTATCCGGCTTTA+CGG | + | chr8_2:59655135-59655154 | Msa1258460:CDS | 45.0% |
| TCATTGGAAGACCGTAAAGC+CGG | - | chr8_2:59655149-59655168 | None:intergenic | 45.0% | |
| GCTTTACGGTCTTCCAATGA+AGG | + | chr8_2:59655149-59655168 | Msa1258460:CDS | 45.0% | |
| !!! | TTATTTTTTTATAAACATTT+AGG | + | chr8_2:59653155-59653174 | Msa1258460:intron | 5.0% |
| ACAACCTAATTGCGTGCGTG+CGG | - | chr8_2:59650767-59650786 | None:intergenic | 50.0% | |
| ACTCCTTCCCTTCATGCAAC+AGG | + | chr8_2:59650857-59650876 | Msa1258460:CDS | 50.0% | |
| GAACCTGTTGCATGAAGGGA+AGG | - | chr8_2:59650863-59650882 | None:intergenic | 50.0% | |
| GGCAGTATCACGCAGTCATA+CGG | + | chr8_2:59651759-59651778 | Msa1258460:CDS | 50.0% | |
| GTATCACGCAGTCATACGGA+TGG | + | chr8_2:59651763-59651782 | Msa1258460:CDS | 50.0% | |
| CAGTCATTGTCCCATGGTTG+AGG | + | chr8_2:59651872-59651891 | Msa1258460:CDS | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | - | chr8_2:59652009-59652028 | None:intergenic | 50.0% | |
| GTCATGTGACCGTAAGGTCA+TGG | + | chr8_2:59652031-59652050 | Msa1258460:intron | 50.0% | |
| AAGGTCATGGGTTCAAGTCC+TGG | + | chr8_2:59652044-59652063 | Msa1258460:intron | 50.0% | |
| GCTGCGTGCAATACACCAAA+TGG | + | chr8_2:59652097-59652116 | Msa1258460:intron | 50.0% | |
| GCGTGCAATACACCAAATGG+TGG | + | chr8_2:59652100-59652119 | Msa1258460:intron | 50.0% | |
| GTGTGCTTCACTGCTGATGT+TGG | + | chr8_2:59652351-59652370 | Msa1258460:CDS | 50.0% | |
| GAAGCCAAAGCAAAAGCCAG+TGG | + | chr8_2:59652569-59652588 | Msa1258460:CDS | 50.0% | |
| GTATTTCCTTGCTTGCGTGC+TGG | + | chr8_2:59652644-59652663 | Msa1258460:CDS | 50.0% | |
| !! | GTGCTGGTGCCATTTATGAG+AGG | + | chr8_2:59652660-59652679 | Msa1258460:CDS | 50.0% |
| GTACTTGCTTGGGACCTCAA+TGG | + | chr8_2:59652685-59652704 | Msa1258460:intron | 50.0% | |
| AATTACAGGACGGGCCATTG+AGG | - | chr8_2:59652702-59652721 | None:intergenic | 50.0% | |
| TGAAGAAATGGCACGGACAC+CGG | - | chr8_2:59652899-59652918 | None:intergenic | 50.0% | |
| ! | ACTGATTGATCCGTGCTGAC+TGG | + | chr8_2:59652980-59652999 | Msa1258460:intron | 50.0% |
| !! | ATTGATCCGTGCTGACTGGT+AGG | + | chr8_2:59652984-59653003 | Msa1258460:intron | 50.0% |
| TCCTTTCCCTGTACACCCAT+GGG | - | chr8_2:59653052-59653071 | None:intergenic | 50.0% | |
| TTCCTTTCCCTGTACACCCA+TGG | - | chr8_2:59653053-59653072 | None:intergenic | 50.0% | |
| GTAATATCCCACTCCCTCCA+TGG | - | chr8_2:59653234-59653253 | None:intergenic | 50.0% | |
| TGGAGGGAGTGGGATATTAC+AGG | + | chr8_2:59653234-59653253 | Msa1258460:CDS | 50.0% | |
| GGAGGGAGTGGGATATTACA+GGG | + | chr8_2:59653235-59653254 | Msa1258460:CDS | 50.0% | |
| AAAGCACAACGTTCCCGTTC+CGG | + | chr8_2:59653284-59653303 | Msa1258460:CDS | 50.0% | |
| CCTCATGGCTAAGATGCCAT+AGG | - | chr8_2:59653344-59653363 | None:intergenic | 50.0% | |
| CCTATGGCATCTTAGCCATG+AGG | + | chr8_2:59653341-59653360 | Msa1258460:CDS | 50.0% | |
| CCTTCTTGGGTTCATTAGCC+GGG | - | chr8_2:59654208-59654227 | None:intergenic | 50.0% | |
| GTTCTCCCAAAGAGTCTCAC+AGG | - | chr8_2:59654359-59654378 | None:intergenic | 50.0% | |
| GGACTTCCCGTTTCACTCAA+TGG | + | chr8_2:59654673-59654692 | Msa1258460:CDS | 50.0% | |
| AGCTCAGCGAGTAAAGTTGC+TGG | - | chr8_2:59654712-59654731 | None:intergenic | 50.0% | |
| CTCGCTGAGCTCAATGAGAT+AGG | + | chr8_2:59654721-59654740 | Msa1258460:CDS | 50.0% | |
| GCTGAGCTCAATGAGATAGG+TGG | + | chr8_2:59654724-59654743 | Msa1258460:CDS | 50.0% | |
| CGCGGAGTTTATGAAACTCC+TGG | + | chr8_2:59654805-59654824 | Msa1258460:CDS | 50.0% | |
| TGATCCACTTCGTGAGTCGA+TGG | + | chr8_2:59654951-59654970 | Msa1258460:CDS | 50.0% | |
| ACGGTCTTCCAATGAAGGTC+CGG | + | chr8_2:59655154-59655173 | Msa1258460:CDS | 50.0% | |
| TAATTGCGTGCGTGCGGCTT+TGG | - | chr8_2:59650761-59650780 | None:intergenic | 55.0% | |
| AAAGCCGCACGCACGCAATT+AGG | + | chr8_2:59650760-59650779 | Msa1258460:five_prime_UTR | 55.0% | |
| !! | GTCGGTGCTGGTAGACTTCA+AGG | + | chr8_2:59651209-59651228 | Msa1258460:CDS | 55.0% |
| TCCGAAGCCAAGAAGGGTAG+CGG | + | chr8_2:59651793-59651812 | Msa1258460:CDS | 55.0% | |
| CTGAAGCTCCCGCATATGCA+GGG | - | chr8_2:59652140-59652159 | None:intergenic | 55.0% | |
| ACTGAAGCTCCCGCATATGC+AGG | - | chr8_2:59652141-59652160 | None:intergenic | 55.0% | |
| !!! | GGCTCCACTGGCTTTTGCTT+TGG | - | chr8_2:59652576-59652595 | None:intergenic | 55.0% |
| GACTAATTGGGAGGCTCCAC+TGG | - | chr8_2:59652588-59652607 | None:intergenic | 55.0% | |
| GGCCCGTCCTGTAATTGCAA+AGG | + | chr8_2:59652706-59652725 | Msa1258460:intron | 55.0% | |
| ! | ACTGACACGGTGTTGGACAC+TGG | - | chr8_2:59652786-59652805 | None:intergenic | 55.0% |
| CACGGACACCGGACATAACA+CGG | - | chr8_2:59652888-59652907 | None:intergenic | 55.0% | |
| GAGCTGATGCTGTCTCCCAT+GGG | + | chr8_2:59653034-59653053 | Msa1258460:CDS | 55.0% | |
| CTGTCTCCCATGGGTGTACA+GGG | + | chr8_2:59653043-59653062 | Msa1258460:CDS | 55.0% | |
| TCCCATGGGTGTACAGGGAA+AGG | + | chr8_2:59653048-59653067 | Msa1258460:CDS | 55.0% | |
| CCCGGCTAATGAACCCAAGA+AGG | + | chr8_2:59654205-59654224 | Msa1258460:CDS | 55.0% | |
| CATGATGTCTGTAGACCCGG+AGG | + | chr8_2:59654235-59654254 | Msa1258460:intron | 55.0% | |
| ! | CTTGATCTGGAGCATCCTCC+GGG | - | chr8_2:59654253-59654272 | None:intergenic | 55.0% |
| ! | GCTTGATCTGGAGCATCCTC+CGG | - | chr8_2:59654254-59654273 | None:intergenic | 55.0% |
| ! | GTGGAAAGCACGGAATTGGC+CGG | + | chr8_2:59654743-59654762 | Msa1258460:CDS | 55.0% |
| CTTGTAGGCATGAAGAGCCG+CGG | + | chr8_2:59654787-59654806 | Msa1258460:CDS | 55.0% | |
| CGGTCTTCCAATGAAGGTCC+GGG | + | chr8_2:59655155-59655174 | Msa1258460:CDS | 55.0% | |
| AGCATTGCCCGGACCTTCAT+TGG | - | chr8_2:59655165-59655184 | None:intergenic | 55.0% | |
| GTCCGGGCAATGCTTGAACA+GGG | + | chr8_2:59655171-59655190 | Msa1258460:CDS | 55.0% | |
| !! | CCAGCACCGACACTAGCTCT+TGG | - | chr8_2:59651200-59651219 | None:intergenic | 60.0% |
| !! | CCAAGAGCTAGTGTCGGTGC+TGG | + | chr8_2:59651197-59651216 | Msa1258460:CDS | 60.0% |
| CCCGCTACCCTTCTTGGCTT+CGG | - | chr8_2:59651797-59651816 | None:intergenic | 60.0% | |
| CCGAAGCCAAGAAGGGTAGC+GGG | + | chr8_2:59651794-59651813 | Msa1258460:CDS | 60.0% | |
| ACGTAGCCCGCTACCCTTCT+TGG | - | chr8_2:59651803-59651822 | None:intergenic | 60.0% | |
| !! | AAGAAGGGTAGCGGGCTACG+TGG | + | chr8_2:59651802-59651821 | Msa1258460:CDS | 60.0% |
| AGGGGTAACCTTGGCGCAAC+TGG | + | chr8_2:59651998-59652017 | Msa1258460:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr8_2:59652113-59652132 | Msa1258460:intron | 60.0% |
| CATATGCAGGGTCCGGGAAG+GGG | - | chr8_2:59652128-59652147 | None:intergenic | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | - | chr8_2:59652129-59652148 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | + | chr8_2:59652128-59652147 | Msa1258460:intron | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | + | chr8_2:59652129-59652148 | Msa1258460:intron | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | + | chr8_2:59652145-59652164 | Msa1258460:intron | 60.0% | |
| ATGGCACCAGCACGCAAGCA+AGG | - | chr8_2:59652653-59652672 | None:intergenic | 60.0% | |
| CCATGGCCTACCAGTCAGCA+CGG | - | chr8_2:59652993-59653012 | None:intergenic | 60.0% | |
| ! | TGCTGACTGGTAGGCCATGG+TGG | + | chr8_2:59652993-59653012 | Msa1258460:intron | 60.0% |
| GGAGCTGATGCTGTCTCCCA+TGG | + | chr8_2:59653033-59653052 | Msa1258460:CDS | 60.0% | |
| GCTGTCTCCCATGGGTGTAC+AGG | + | chr8_2:59653042-59653061 | Msa1258460:CDS | 60.0% | |
| TTGTGGCTCCATGGAGGGAG+TGG | + | chr8_2:59653223-59653242 | Msa1258460:CDS | 60.0% | |
| TGTGGCTCCATGGAGGGAGT+GGG | + | chr8_2:59653224-59653243 | Msa1258460:CDS | 60.0% | |
| CGGAATTGGCCGGATCGACA+TGG | + | chr8_2:59654753-59654772 | Msa1258460:CDS | 60.0% | |
| !! | GCGTCCATCGACTCACGAAG+TGG | - | chr8_2:59654958-59654977 | None:intergenic | 60.0% |
| GGTCCGGGCAATGCTTGAAC+AGG | + | chr8_2:59655170-59655189 | Msa1258460:CDS | 60.0% | |
| ! | GGCCCTGTTCAAGCATTGCC+CGG | - | chr8_2:59655176-59655195 | None:intergenic | 60.0% |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr8_2:59652115-59652134 | None:intergenic | 65.0% | |
| CGCATATGCAGGGTCCGGGA+AGG | - | chr8_2:59652130-59652149 | None:intergenic | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | - | chr8_2:59652134-59652153 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | - | chr8_2:59652135-59652154 | None:intergenic | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | + | chr8_2:59652146-59652165 | Msa1258460:intron | 65.0% | |
| !! | CCGTGCTGACTGGTAGGCCA+TGG | + | chr8_2:59652990-59653009 | Msa1258460:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 59650755 | 59655474 | 59650755 | ID=Msa1258460;Name=Msa1258460 |
| chr8_2 | mRNA | 59650755 | 59655474 | 59650755 | ID=Msa1258460-mRNA-1;Parent=Msa1258460;Name=Msa1258460-mRNA-1;_AED=0.08;_eAED=0.08;_QI=57|0.66|0.7|1|1|1|10|274|453 |
| chr8_2 | exon | 59650755 | 59650878 | 59650755 | ID=Msa1258460-mRNA-1:exon:18542;Parent=Msa1258460-mRNA-1 |
| chr8_2 | exon | 59651049 | 59651101 | 59651049 | ID=Msa1258460-mRNA-1:exon:18543;Parent=Msa1258460-mRNA-1 |
| chr8_2 | exon | 59651191 | 59651230 | 59651191 | ID=Msa1258460-mRNA-1:exon:18544;Parent=Msa1258460-mRNA-1 |
| chr8_2 | exon | 59651752 | 59651893 | 59651752 | ID=Msa1258460-mRNA-1:exon:18545;Parent=Msa1258460-mRNA-1 |
| chr8_2 | exon | 59652329 | 59652377 | 59652329 | ID=Msa1258460-mRNA-1:exon:18546;Parent=Msa1258460-mRNA-1 |
| chr8_2 | exon | 59652545 | 59652684 | 59652545 | ID=Msa1258460-mRNA-1:exon:18547;Parent=Msa1258460-mRNA-1 |
| chr8_2 | exon | 59653006 | 59653084 | 59653006 | ID=Msa1258460-mRNA-1:exon:18548;Parent=Msa1258460-mRNA-1 |
| chr8_2 | exon | 59653177 | 59653362 | 59653177 | ID=Msa1258460-mRNA-1:exon:18549;Parent=Msa1258460-mRNA-1 |
| chr8_2 | exon | 59654188 | 59654240 | 59654188 | ID=Msa1258460-mRNA-1:exon:18550;Parent=Msa1258460-mRNA-1 |
| chr8_2 | exon | 59654648 | 59655474 | 59654648 | ID=Msa1258460-mRNA-1:exon:18551;Parent=Msa1258460-mRNA-1 |
| chr8_2 | five_prime_UTR | 59650755 | 59650811 | 59650755 | ID=Msa1258460-mRNA-1:five_prime_utr;Parent=Msa1258460-mRNA-1 |
| chr8_2 | CDS | 59650812 | 59650878 | 59650812 | ID=Msa1258460-mRNA-1:cds;Parent=Msa1258460-mRNA-1 |
| chr8_2 | CDS | 59651049 | 59651101 | 59651049 | ID=Msa1258460-mRNA-1:cds;Parent=Msa1258460-mRNA-1 |
| chr8_2 | CDS | 59651191 | 59651230 | 59651191 | ID=Msa1258460-mRNA-1:cds;Parent=Msa1258460-mRNA-1 |
| chr8_2 | CDS | 59651752 | 59651893 | 59651752 | ID=Msa1258460-mRNA-1:cds;Parent=Msa1258460-mRNA-1 |
| chr8_2 | CDS | 59652329 | 59652377 | 59652329 | ID=Msa1258460-mRNA-1:cds;Parent=Msa1258460-mRNA-1 |
| chr8_2 | CDS | 59652545 | 59652684 | 59652545 | ID=Msa1258460-mRNA-1:cds;Parent=Msa1258460-mRNA-1 |
| chr8_2 | CDS | 59653006 | 59653084 | 59653006 | ID=Msa1258460-mRNA-1:cds;Parent=Msa1258460-mRNA-1 |
| chr8_2 | CDS | 59653177 | 59653362 | 59653177 | ID=Msa1258460-mRNA-1:cds;Parent=Msa1258460-mRNA-1 |
| chr8_2 | CDS | 59654188 | 59654240 | 59654188 | ID=Msa1258460-mRNA-1:cds;Parent=Msa1258460-mRNA-1 |
| chr8_2 | CDS | 59654648 | 59655200 | 59654648 | ID=Msa1258460-mRNA-1:cds;Parent=Msa1258460-mRNA-1 |
| chr8_2 | three_prime_UTR | 59655201 | 59655474 | 59655201 | ID=Msa1258460-mRNA-1:three_prime_utr;Parent=Msa1258460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
