Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1169220 | XP_024626383.1 | 97.863 | 468 | 10 | 0 | 1 | 468 | 1 | 468 | 0.0 | 932 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1169220 | sp|Q93ZH7|IQD2_ARATH | 52.449 | 490 | 182 | 15 | 1 | 468 | 1 | 461 | 3.19e-146 | 428 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1169220 | G7L1R6 | 97.863 | 468 | 10 | 0 | 1 | 468 | 1 | 468 | 0.0 | 932 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0037180 | Msa1169220 | 0.809058 | 2.283125e-50 | -8.615850e-47 |
| Msa0092220 | Msa1169220 | 0.821711 | 3.491194e-53 | -8.615850e-47 |
| Msa0610700 | Msa1169220 | -0.805340 | 1.399804e-49 | -8.615850e-47 |
| Msa0693340 | Msa1169220 | -0.801562 | 8.490251e-49 | -8.615850e-47 |
| Msa0204950 | Msa1169220 | 0.801921 | 7.165612e-49 | -8.615850e-47 |
| Msa0216340 | Msa1169220 | 0.830959 | 2.189419e-55 | -8.615850e-47 |
| Msa0226450 | Msa1169220 | -0.802127 | 6.502087e-49 | -8.615850e-47 |
| Msa0378350 | Msa1169220 | 0.821674 | 3.561880e-53 | -8.615850e-47 |
| Msa0423700 | Msa1169220 | -0.811250 | 7.689795e-51 | -8.615850e-47 |
| Msa0441600 | Msa1169220 | 0.808388 | 3.173981e-50 | -8.615850e-47 |
| Msa0470480 | Msa1169220 | -0.801066 | 1.072788e-48 | -8.615850e-47 |
| Msa0479420 | Msa1169220 | 0.813235 | 2.836173e-51 | -8.615850e-47 |
| Msa1045230 | Msa1169220 | 0.805303 | 1.424687e-49 | -8.615850e-47 |
| Msa1070890 | Msa1169220 | 0.808921 | 2.441439e-50 | -8.615850e-47 |
| Msa1078550 | Msa1169220 | 0.816777 | 4.643284e-52 | -8.615850e-47 |
| Msa1078560 | Msa1169220 | 0.803503 | 3.379002e-49 | -8.615850e-47 |
| Msa1078660 | Msa1169220 | 0.832216 | 1.072581e-55 | -8.615850e-47 |
| Msa1078830 | Msa1169220 | 0.822011 | 2.975697e-53 | -8.615850e-47 |
| Msa1078890 | Msa1169220 | 0.807394 | 5.164971e-50 | -8.615850e-47 |
| Msa1078940 | Msa1169220 | 0.962715 | 3.293867e-121 | -8.615850e-47 |
| Msa0258040 | Msa1169220 | 0.861844 | 7.711332e-64 | -8.615850e-47 |
| Msa0320600 | Msa1169220 | 0.802531 | 5.367857e-49 | -8.615850e-47 |
| Msa0326710 | Msa1169220 | 0.816320 | 5.875570e-52 | -8.615850e-47 |
| Msa0334320 | Msa1169220 | 0.809988 | 1.441011e-50 | -8.615850e-47 |
| Msa0335360 | Msa1169220 | 0.803600 | 3.225888e-49 | -8.615850e-47 |
| Msa1123940 | Msa1169220 | 0.950183 | 2.782606e-108 | -8.615850e-47 |
| Msa1158200 | Msa1169220 | 0.810716 | 1.003590e-50 | -8.615850e-47 |
| Msa1165090 | Msa1169220 | 0.810418 | 1.164328e-50 | -8.615850e-47 |
| Msa1169220 | Msa1169380 | 0.836312 | 1.007186e-56 | -8.615850e-47 |
| Msa1169220 | Msa1169460 | 0.813147 | 2.965395e-51 | -8.615850e-47 |
| Msa1169220 | Msa1169660 | 0.824791 | 6.666487e-54 | -8.615850e-47 |
| Msa1169220 | Msa1192180 | 0.802421 | 5.654362e-49 | -8.615850e-47 |
| Msa1169220 | Msa1207330 | 0.852530 | 4.345319e-61 | -8.615850e-47 |
| Msa1169220 | Msa1259730 | 0.829072 | 6.317232e-55 | -8.615850e-47 |
| Msa1169220 | Msa1327870 | 0.811906 | 5.537080e-51 | -8.615850e-47 |
| Msa1169220 | Msa1331300 | 0.845276 | 4.493392e-59 | -8.615850e-47 |
| Msa1169220 | Msa1365820 | 0.809486 | 1.848054e-50 | -8.615850e-47 |
| Msa1169220 | Msa1368390 | 0.804345 | 2.259148e-49 | -8.615850e-47 |
| Msa1169220 | Msa1382710 | 0.804903 | 1.727349e-49 | -8.615850e-47 |
| Msa1169220 | Msa1383820 | 0.819197 | 1.317647e-52 | -8.615850e-47 |
| Msa1169220 | Msa1426080 | 0.919750 | 3.046029e-87 | -8.615850e-47 |
| Msa1169220 | Msa1464880 | 0.822248 | 2.622334e-53 | -8.615850e-47 |
| Msa0523110 | Msa1169220 | 0.805356 | 1.388789e-49 | -8.615850e-47 |
| Msa0525880 | Msa1169220 | 0.802348 | 5.853705e-49 | -8.615850e-47 |
| Msa0574900 | Msa1169220 | 0.842164 | 3.056999e-58 | -8.615850e-47 |
| Msa0579070 | Msa1169220 | -0.804806 | 1.810447e-49 | -8.615850e-47 |
| Msa0597700 | Msa1169220 | 0.836069 | 1.161265e-56 | -8.615850e-47 |
| Msa0930770 | Msa1169220 | 0.829296 | 5.573810e-55 | -8.615850e-47 |
| Msa0968360 | Msa1169220 | 0.975748 | 1.589903e-140 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1169220 | MtrunA17_Chr7g0263731 | 97.863 | 468 | 10 | 0 | 1 | 468 | 1 | 468 | 0.0 | 932 |
| Msa1169220 | MtrunA17_Chr1g0181581 | 69.665 | 478 | 121 | 11 | 1 | 467 | 1 | 465 | 0.0 | 596 |
| Msa1169220 | MtrunA17_Chr6g0462191 | 50.873 | 458 | 188 | 9 | 1 | 453 | 1 | 426 | 4.66e-121 | 360 |
| Msa1169220 | MtrunA17_Chr1g0200161 | 39.293 | 509 | 238 | 11 | 1 | 465 | 1 | 482 | 5.26e-98 | 303 |
| Msa1169220 | MtrunA17_Chr4g0045641 | 35.294 | 357 | 178 | 15 | 108 | 439 | 146 | 474 | 5.62e-43 | 159 |
| Msa1169220 | MtrunA17_Chr4g0025441 | 47.917 | 192 | 96 | 2 | 107 | 298 | 95 | 282 | 7.72e-42 | 154 |
| Msa1169220 | MtrunA17_Chr8g0346021 | 32.061 | 393 | 200 | 14 | 94 | 438 | 113 | 486 | 1.53e-41 | 155 |
| Msa1169220 | MtrunA17_Chr4g0020671 | 31.590 | 459 | 210 | 23 | 3 | 439 | 4 | 380 | 2.05e-38 | 144 |
| Msa1169220 | MtrunA17_Chr2g0283321 | 40.828 | 169 | 97 | 2 | 107 | 275 | 62 | 227 | 5.79e-36 | 134 |
| Msa1169220 | MtrunA17_Chr7g0273861 | 28.539 | 438 | 219 | 18 | 1 | 411 | 1 | 371 | 6.30e-32 | 126 |
| Msa1169220 | MtrunA17_Chr3g0135851 | 44.385 | 187 | 89 | 5 | 103 | 275 | 80 | 265 | 1.23e-31 | 126 |
| Msa1169220 | MtrunA17_Chr2g0316401 | 35.928 | 167 | 106 | 1 | 109 | 275 | 75 | 240 | 7.46e-31 | 121 |
| Msa1169220 | MtrunA17_Chr1g0146931 | 39.109 | 202 | 97 | 4 | 106 | 281 | 120 | 321 | 3.14e-28 | 117 |
| Msa1169220 | MtrunA17_Chr3g0126901 | 27.352 | 457 | 219 | 15 | 1 | 429 | 1 | 372 | 5.33e-26 | 110 |
| Msa1169220 | MtrunA17_Chr1g0204901 | 31.950 | 241 | 130 | 8 | 1 | 211 | 1 | 237 | 9.92e-20 | 91.7 |
| Msa1169220 | MtrunA17_Chr1g0203711 | 28.254 | 315 | 173 | 10 | 107 | 411 | 114 | 385 | 7.56e-19 | 88.6 |
| Msa1169220 | MtrunA17_Chr8g0340761 | 31.496 | 254 | 125 | 12 | 1 | 216 | 1 | 243 | 1.01e-18 | 88.2 |
| Msa1169220 | MtrunA17_Chr8g0342551 | 33.681 | 288 | 166 | 8 | 1 | 283 | 1 | 268 | 1.51e-18 | 87.8 |
| Msa1169220 | MtrunA17_Chr8g0389781 | 40.458 | 131 | 61 | 4 | 103 | 223 | 121 | 244 | 2.33e-18 | 87.4 |
| Msa1169220 | MtrunA17_Chr6g0472551 | 53.165 | 79 | 36 | 1 | 107 | 184 | 115 | 193 | 2.98e-18 | 87.0 |
| Msa1169220 | MtrunA17_Chr2g0330051 | 32.000 | 325 | 150 | 10 | 105 | 409 | 69 | 342 | 3.53e-18 | 86.3 |
| Msa1169220 | MtrunA17_Chr2g0330921 | 48.780 | 82 | 36 | 1 | 97 | 172 | 80 | 161 | 1.14e-16 | 81.3 |
| Msa1169220 | MtrunA17_Chr1g0172611 | 27.500 | 280 | 179 | 10 | 1 | 265 | 1 | 271 | 3.78e-16 | 79.7 |
| Msa1169220 | MtrunA17_Chr7g0273951 | 50.000 | 74 | 37 | 0 | 110 | 183 | 108 | 181 | 1.76e-15 | 78.2 |
| Msa1169220 | MtrunA17_Chr4g0060381 | 28.507 | 221 | 118 | 3 | 54 | 272 | 61 | 243 | 3.15e-15 | 78.2 |
| Msa1169220 | MtrunA17_Chr1g0166431 | 43.000 | 100 | 56 | 1 | 108 | 206 | 117 | 216 | 5.87e-14 | 73.6 |
| Msa1169220 | MtrunA17_Chr8g0371131 | 48.485 | 66 | 34 | 0 | 106 | 171 | 69 | 134 | 8.40e-14 | 68.6 |
| Msa1169220 | MtrunA17_Chr3g0130441 | 36.842 | 114 | 65 | 3 | 251 | 362 | 1 | 109 | 2.02e-12 | 64.3 |
| Msa1169220 | MtrunA17_Chr1g0156121 | 31.481 | 162 | 84 | 5 | 108 | 267 | 124 | 260 | 3.05e-12 | 68.9 |
| Msa1169220 | MtrunA17_Chr3g0130451 | 54.098 | 61 | 25 | 1 | 169 | 226 | 47 | 107 | 5.60e-12 | 62.4 |
| Msa1169220 | MtrunA17_Chr4g0057321 | 46.970 | 66 | 35 | 0 | 106 | 171 | 86 | 151 | 1.35e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1169220 | AT5G03040.1 | 52.449 | 490 | 182 | 15 | 1 | 468 | 1 | 461 | 3.24e-147 | 428 |
| Msa1169220 | AT5G03040.3 | 52.449 | 490 | 182 | 15 | 1 | 468 | 1 | 461 | 3.24e-147 | 428 |
| Msa1169220 | AT5G03040.2 | 52.449 | 490 | 182 | 15 | 1 | 468 | 1 | 461 | 3.24e-147 | 428 |
| Msa1169220 | AT3G09710.1 | 48.211 | 475 | 199 | 15 | 1 | 456 | 1 | 447 | 1.14e-111 | 337 |
| Msa1169220 | AT3G52290.1 | 46.383 | 470 | 190 | 14 | 1 | 456 | 1 | 422 | 2.02e-111 | 336 |
| Msa1169220 | AT3G09710.2 | 46.830 | 489 | 199 | 16 | 1 | 456 | 1 | 461 | 3.00e-108 | 329 |
| Msa1169220 | AT2G26410.2 | 37.425 | 334 | 160 | 8 | 106 | 434 | 146 | 435 | 2.42e-56 | 196 |
| Msa1169220 | AT2G26410.1 | 37.425 | 334 | 160 | 8 | 106 | 434 | 146 | 435 | 2.42e-56 | 196 |
| Msa1169220 | AT3G22190.3 | 44.177 | 249 | 123 | 8 | 86 | 323 | 63 | 306 | 2.18e-40 | 150 |
| Msa1169220 | AT3G22190.2 | 44.177 | 249 | 123 | 8 | 86 | 323 | 63 | 306 | 2.18e-40 | 150 |
| Msa1169220 | AT3G22190.4 | 44.177 | 249 | 123 | 8 | 86 | 323 | 63 | 306 | 2.18e-40 | 150 |
| Msa1169220 | AT3G22190.1 | 44.177 | 249 | 123 | 8 | 86 | 323 | 63 | 306 | 2.18e-40 | 150 |
| Msa1169220 | AT3G59690.2 | 33.770 | 305 | 152 | 8 | 111 | 411 | 172 | 430 | 1.43e-37 | 144 |
| Msa1169220 | AT3G59690.1 | 33.770 | 305 | 152 | 8 | 111 | 411 | 172 | 430 | 1.43e-37 | 144 |
| Msa1169220 | AT2G33990.1 | 40.698 | 172 | 100 | 1 | 107 | 278 | 46 | 215 | 1.71e-37 | 138 |
| Msa1169220 | AT2G26180.1 | 46.667 | 195 | 89 | 4 | 95 | 275 | 65 | 258 | 1.15e-36 | 140 |
| Msa1169220 | AT1G01110.2 | 28.858 | 499 | 266 | 20 | 1 | 440 | 1 | 469 | 1.43e-36 | 141 |
| Msa1169220 | AT2G43680.4 | 31.672 | 341 | 173 | 12 | 105 | 439 | 319 | 605 | 1.54e-35 | 140 |
| Msa1169220 | AT2G43680.2 | 31.672 | 341 | 173 | 12 | 105 | 439 | 319 | 605 | 1.54e-35 | 140 |
| Msa1169220 | AT2G43680.3 | 31.672 | 341 | 173 | 12 | 105 | 439 | 319 | 605 | 1.54e-35 | 140 |
| Msa1169220 | AT2G43680.5 | 31.672 | 341 | 173 | 12 | 105 | 439 | 319 | 605 | 1.54e-35 | 140 |
| Msa1169220 | AT2G43680.1 | 31.672 | 341 | 173 | 12 | 105 | 439 | 320 | 606 | 1.71e-35 | 140 |
| Msa1169220 | AT4G00820.1 | 30.833 | 360 | 210 | 13 | 106 | 440 | 130 | 475 | 1.93e-34 | 135 |
| Msa1169220 | AT3G15050.1 | 37.870 | 169 | 104 | 1 | 108 | 276 | 50 | 217 | 3.33e-33 | 126 |
| Msa1169220 | AT3G49260.1 | 30.592 | 304 | 178 | 9 | 1 | 275 | 1 | 300 | 1.78e-30 | 123 |
| Msa1169220 | AT3G49260.4 | 30.592 | 304 | 178 | 9 | 1 | 275 | 1 | 300 | 1.78e-30 | 123 |
| Msa1169220 | AT3G49260.2 | 30.592 | 304 | 178 | 9 | 1 | 275 | 1 | 300 | 1.78e-30 | 123 |
| Msa1169220 | AT5G13460.1 | 29.508 | 305 | 158 | 10 | 1 | 279 | 1 | 274 | 5.23e-30 | 122 |
| Msa1169220 | AT3G49260.3 | 30.293 | 307 | 176 | 10 | 1 | 275 | 1 | 301 | 1.85e-29 | 120 |
| Msa1169220 | AT1G72670.1 | 34.906 | 212 | 124 | 5 | 95 | 295 | 74 | 282 | 1.45e-28 | 117 |
| Msa1169220 | AT4G10640.1 | 28.189 | 486 | 189 | 20 | 1 | 436 | 1 | 376 | 2.54e-22 | 99.4 |
| Msa1169220 | AT1G17480.1 | 36.306 | 157 | 87 | 3 | 106 | 260 | 92 | 237 | 7.08e-21 | 94.4 |
| Msa1169220 | AT4G29150.1 | 44.444 | 99 | 55 | 0 | 102 | 200 | 125 | 223 | 7.97e-18 | 85.5 |
| Msa1169220 | AT4G14750.1 | 43.529 | 85 | 48 | 0 | 90 | 174 | 87 | 171 | 1.46e-17 | 84.7 |
| Msa1169220 | AT4G14750.2 | 43.529 | 85 | 48 | 0 | 90 | 174 | 146 | 230 | 2.06e-17 | 84.7 |
| Msa1169220 | AT3G16490.1 | 43.000 | 100 | 52 | 2 | 101 | 197 | 100 | 197 | 2.21e-17 | 84.3 |
| Msa1169220 | AT4G14750.3 | 43.529 | 85 | 48 | 0 | 90 | 174 | 146 | 230 | 2.26e-17 | 84.7 |
| Msa1169220 | AT1G18840.1 | 35.659 | 129 | 79 | 2 | 61 | 188 | 64 | 189 | 2.99e-16 | 81.6 |
| Msa1169220 | AT1G18840.3 | 35.659 | 129 | 79 | 2 | 61 | 188 | 64 | 189 | 2.99e-16 | 81.6 |
| Msa1169220 | AT1G18840.2 | 35.659 | 129 | 79 | 2 | 61 | 188 | 64 | 189 | 2.99e-16 | 81.6 |
| Msa1169220 | AT5G35670.1 | 35.542 | 166 | 94 | 5 | 107 | 270 | 159 | 313 | 4.03e-16 | 80.9 |
| Msa1169220 | AT1G74690.1 | 31.953 | 169 | 85 | 3 | 108 | 272 | 113 | 255 | 4.80e-16 | 81.3 |
| Msa1169220 | AT4G23060.1 | 42.157 | 102 | 57 | 1 | 82 | 181 | 139 | 240 | 1.65e-15 | 79.3 |
| Msa1169220 | AT5G07240.1 | 61.017 | 59 | 23 | 0 | 110 | 168 | 108 | 166 | 1.79e-15 | 78.6 |
| Msa1169220 | AT5G07240.2 | 61.017 | 59 | 23 | 0 | 110 | 168 | 154 | 212 | 2.22e-15 | 78.6 |
| Msa1169220 | AT1G51960.1 | 54.839 | 62 | 28 | 0 | 110 | 171 | 102 | 163 | 6.29e-15 | 76.3 |
| Msa1169220 | AT5G62070.1 | 59.649 | 57 | 23 | 0 | 106 | 162 | 115 | 171 | 9.05e-15 | 76.3 |
| Msa1169220 | AT3G51380.1 | 50.000 | 64 | 32 | 0 | 106 | 169 | 35 | 98 | 1.66e-14 | 69.7 |
| Msa1169220 | AT5G03960.1 | 36.000 | 150 | 65 | 3 | 100 | 232 | 99 | 234 | 7.27e-14 | 73.6 |
| Msa1169220 | AT5G03960.3 | 36.000 | 150 | 65 | 3 | 100 | 232 | 100 | 235 | 7.64e-14 | 73.6 |
| Msa1169220 | AT5G03960.2 | 36.000 | 150 | 65 | 3 | 100 | 232 | 100 | 235 | 7.64e-14 | 73.6 |
| Msa1169220 | AT3G49380.1 | 54.237 | 59 | 27 | 0 | 106 | 164 | 108 | 166 | 4.36e-11 | 64.7 |
| Msa1169220 | AT1G14380.7 | 27.477 | 222 | 117 | 7 | 70 | 274 | 42 | 236 | 7.78e-11 | 64.7 |
| Msa1169220 | AT1G14380.6 | 27.477 | 222 | 117 | 7 | 70 | 274 | 42 | 236 | 8.85e-11 | 64.7 |
| Msa1169220 | AT1G14380.5 | 27.477 | 222 | 117 | 7 | 70 | 274 | 42 | 236 | 8.85e-11 | 64.7 |
| Msa1169220 | AT1G14380.2 | 27.477 | 222 | 117 | 7 | 70 | 274 | 42 | 236 | 8.85e-11 | 64.7 |
Find 144 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCTTCCCCATTATCTTCT+TGG | 0.102885 | 7_4:+62157677 | None:intergenic |
| CTCATACTTGCTCAGTAATT+TGG | 0.160600 | 7_4:+62156596 | None:intergenic |
| CACAGGTAACTCTGCATTTA+TGG | 0.176562 | 7_4:+62154934 | None:intergenic |
| GACCTTGAGGGGAAGAAATT+TGG | 0.205051 | 7_4:-62154662 | Msa1169220:three_prime_UTR |
| TTTACAGGAACATGTATTAA+AGG | 0.248528 | 7_4:-62158194 | Msa1169220:five_prime_UTR |
| ATCTTTCACTTCATTCATTC+AGG | 0.259648 | 7_4:-62158095 | Msa1169220:intron |
| CAATTTGTTCTTTAGATTGT+AGG | 0.261072 | 7_4:+62156622 | None:intergenic |
| AGCTGGGTGAGCCAGGATTT+TGG | 0.263792 | 7_4:+62155341 | None:intergenic |
| TGATATAAAGGATCAAATTA+AGG | 0.280243 | 7_4:-62157704 | Msa1169220:intron |
| CTGTACACTTGCCATGCTTT+TGG | 0.281192 | 7_4:+62155219 | None:intergenic |
| AAAATACAAATTGATTAATA+TGG | 0.294508 | 7_4:+62154705 | None:intergenic |
| ATTGCTGCCACTTCATCCTT+TGG | 0.307055 | 7_4:+62157267 | None:intergenic |
| TAATGGGGAAGAAGGGAAAT+TGG | 0.319680 | 7_4:-62157668 | Msa1169220:CDS |
| AGTTCGAGCCGCAGCATTAT+AGG | 0.323895 | 7_4:-62155430 | Msa1169220:CDS |
| TTCCGCAGGCACTCTATTGC+CGG | 0.327399 | 7_4:-62155187 | Msa1169220:CDS |
| AAAAGTATTAATGAAATGTT+TGG | 0.336829 | 7_4:+62154755 | None:intergenic |
| AGTCCATTAGCAAAAGAAAA+TGG | 0.343691 | 7_4:-62155061 | Msa1169220:CDS |
| TCAGTTAATTTAATATCTTC+TGG | 0.345648 | 7_4:+62157423 | None:intergenic |
| AAGGAATGCCAAGAAGATAA+TGG | 0.348066 | 7_4:-62157685 | Msa1169220:exon |
| AGGAATGCCAAGAAGATAAT+GGG | 0.352188 | 7_4:-62157684 | Msa1169220:exon |
| TCCATCAGTTCCAAGTTATA+TGG | 0.368788 | 7_4:-62155128 | Msa1169220:CDS |
| CGGCTTAGTAGGAGTTGAAT+TGG | 0.370892 | 7_4:+62155312 | None:intergenic |
| CTTGGCCTCGCAGGCGAAGC+CGG | 0.371444 | 7_4:+62154989 | None:intergenic |
| TTAGGCAAGAAGAGCATTGC+GGG | 0.387422 | 7_4:-62156986 | Msa1169220:intron |
| AGAAAATGGCAAACAAGAAA+AGG | 0.397205 | 7_4:-62155047 | Msa1169220:CDS |
| GGCTTATGCATTCACTCATC+AGG | 0.397924 | 7_4:-62156547 | Msa1169220:intron |
| TGGATCCCACCAATCCTACT+TGG | 0.400459 | 7_4:-62155546 | Msa1169220:CDS |
| GACTGAAAGCTGGGTGAGCC+AGG | 0.404427 | 7_4:+62155334 | None:intergenic |
| TTTATGGCGGTTTCTACCTT+CGG | 0.410128 | 7_4:+62154950 | None:intergenic |
| ATCTATGAATCCAATGTTTG+TGG | 0.410976 | 7_4:-62155566 | Msa1169220:CDS |
| TCCATAACCCAACTTCCCTT+TGG | 0.416087 | 7_4:+62155250 | None:intergenic |
| ATGGATGGCTGCCCGACCTT+GGG | 0.416101 | 7_4:-62155503 | Msa1169220:CDS |
| TAGGAGGGTCAGAATGTTAG+AGG | 0.417574 | 7_4:-62156845 | Msa1169220:CDS |
| TTCAGAGTTGAGCTGGAAAC+GGG | 0.418428 | 7_4:+62155384 | None:intergenic |
| CAGAATGTTAGAGGAGAATC+AGG | 0.419135 | 7_4:-62156836 | Msa1169220:CDS |
| AAACAAGAAAAGGGGTCCTT+TGG | 0.420323 | 7_4:-62155037 | Msa1169220:CDS |
| AGAGCATTGCGGGCTTTAAG+AGG | 0.426239 | 7_4:-62156976 | Msa1169220:CDS |
| CTGATTATTATATAATCAAC+TGG | 0.427029 | 7_4:+62154898 | None:intergenic |
| TGCAATCTCAGATTCGTTCT+AGG | 0.427507 | 7_4:-62156864 | Msa1169220:CDS |
| CATTATAGATTGGGGAGGAA+TGG | 0.428913 | 7_4:-62156653 | Msa1169220:intron |
| TCCAAAGGGAAGTTGGGTTA+TGG | 0.429384 | 7_4:-62155251 | Msa1169220:CDS |
| GAAAATGGCAAACAAGAAAA+GGG | 0.429410 | 7_4:-62155046 | Msa1169220:CDS |
| TTGGCCTCGCAGGCGAAGCC+GGG | 0.432715 | 7_4:+62154990 | None:intergenic |
| TTCTTTACCATTGACCTTGA+GGG | 0.433200 | 7_4:-62154674 | Msa1169220:three_prime_UTR |
| GAAGCAGAACCCGGCTTAGT+AGG | 0.447007 | 7_4:+62155301 | None:intergenic |
| ATTATAGATTGGGGAGGAAT+GGG | 0.448809 | 7_4:-62156652 | Msa1169220:intron |
| TTTCTTCCCCTCAAGGTCAA+TGG | 0.453129 | 7_4:+62154667 | None:intergenic |
| TTTCAGAGTTGAGCTGGAAA+CGG | 0.462924 | 7_4:+62155383 | None:intergenic |
| ATATCTTCTGGCGGAGGAAG+AGG | 0.467550 | 7_4:+62157435 | None:intergenic |
| GATGGATGGCTGCCCGACCT+TGG | 0.469154 | 7_4:-62155504 | Msa1169220:CDS |
| CATGTATTAAAGGTGTGGTT+TGG | 0.469410 | 7_4:-62158184 | Msa1169220:five_prime_UTR |
| CTAGCAACTGAAGCAGAACC+CGG | 0.473296 | 7_4:+62155292 | None:intergenic |
| GGCGAGTCCAAAGGGAAGTT+GGG | 0.474248 | 7_4:-62155257 | Msa1169220:CDS |
| CAAATTACTGAGCAAGTATG+AGG | 0.474416 | 7_4:-62156595 | Msa1169220:CDS |
| AATGTATTTCAGAGTTGAGC+TGG | 0.481876 | 7_4:+62155377 | None:intergenic |
| GGATCCCACCAATCCTACTT+GGG | 0.483131 | 7_4:-62155545 | Msa1169220:CDS |
| CAAGAAGATAATGGGGAAGA+AGG | 0.486516 | 7_4:-62157676 | Msa1169220:exon |
| TAATACATGTTCCTGTAAAG+AGG | 0.486866 | 7_4:+62158198 | None:intergenic |
| GAAACTCTTGATTCTAAATG+TGG | 0.487636 | 7_4:-62154515 | Msa1169220:three_prime_UTR |
| CGGGTTCTGCTTCAGTTGCT+AGG | 0.487745 | 7_4:-62155291 | Msa1169220:CDS |
| CAATTCAACTCCTACTAAGC+CGG | 0.488786 | 7_4:-62155311 | Msa1169220:CDS |
| AGGCGAGTCCAAAGGGAAGT+TGG | 0.492154 | 7_4:-62155258 | Msa1169220:CDS |
| CTTGTTGATGAAACACAGAA+TGG | 0.495295 | 7_4:+62154595 | None:intergenic |
| CTGAAGAAGGCGAGTCCAAA+GGG | 0.500013 | 7_4:-62155265 | Msa1169220:CDS |
| AGTTGAATTGGACTGAAAGC+TGG | 0.502940 | 7_4:+62155324 | None:intergenic |
| GCTGTCTGAACAGAACGAAC+AGG | 0.506676 | 7_4:+62157336 | None:intergenic |
| AGCGGAGGGTACTCATGGCT+TGG | 0.509205 | 7_4:+62156908 | None:intergenic |
| AGGACAGAAATCATTAAAGT+AGG | 0.510647 | 7_4:-62154869 | Msa1169220:three_prime_UTR |
| ATTGCGGGCTTTAAGAGGGC+TGG | 0.511040 | 7_4:-62156971 | Msa1169220:CDS |
| CGACTCAATCTGCGAAAGCT+AGG | 0.512605 | 7_4:-62155102 | Msa1169220:CDS |
| GGTGGACCTGAATGACGCCT+TGG | 0.514462 | 7_4:+62154971 | None:intergenic |
| TATTAAAGGTGTGGTTTGGT+TGG | 0.514474 | 7_4:-62158180 | Msa1169220:five_prime_UTR |
| AGCTCTTACAGAAGCACGCA+AGG | 0.515912 | 7_4:-62156801 | Msa1169220:CDS |
| TCCGCAGGCACTCTATTGCC+GGG | 0.521984 | 7_4:-62155186 | Msa1169220:CDS |
| CCAGTAGCGAGCCAAAATCC+TGG | 0.525286 | 7_4:-62155352 | Msa1169220:CDS |
| AGCTCTCAGCCCTGACTCAA+AGG | 0.528686 | 7_4:-62157628 | Msa1169220:intron |
| GGTGAGATTGAAAACATTGA+TGG | 0.529438 | 7_4:-62156950 | Msa1169220:CDS |
| TACAGTCAGATCGGTTCCGC+AGG | 0.535268 | 7_4:-62155201 | Msa1169220:CDS |
| AATACATGTTCCTGTAAAGA+GGG | 0.535430 | 7_4:+62158199 | None:intergenic |
| GTTCATGTTGATCTTGTGAC+GGG | 0.537235 | 7_4:-62154640 | Msa1169220:three_prime_UTR |
| AACCAAATTTCTTCCCCTCA+AGG | 0.538043 | 7_4:+62154660 | None:intergenic |
| CATTGAGCGGAGGGTACTCA+TGG | 0.539242 | 7_4:+62156903 | None:intergenic |
| AATTCAACTCCTACTAAGCC+GGG | 0.541175 | 7_4:-62155310 | Msa1169220:CDS |
| ACCATATAACTTGGAACTGA+TGG | 0.542002 | 7_4:+62155127 | None:intergenic |
| TTGGTGGGATCCACAAACAT+TGG | 0.547737 | 7_4:+62155556 | None:intergenic |
| TTGTAATTTCAGCAACATGA+TGG | 0.550799 | 7_4:+62157379 | None:intergenic |
| TATATAATAATCAGAGTGAA+AGG | 0.551583 | 7_4:-62154889 | Msa1169220:three_prime_UTR |
| ATGGCGGTTTCTACCTTCGG+TGG | 0.551866 | 7_4:+62154953 | None:intergenic |
| TGAGTCGGCACCATATAACT+TGG | 0.553119 | 7_4:+62155118 | None:intergenic |
| GATCCCACCAATCCTACTTG+GGG | 0.554025 | 7_4:-62155544 | Msa1169220:CDS |
| CATTCTGTGTTTCATCAACA+AGG | 0.560883 | 7_4:-62154594 | Msa1169220:three_prime_UTR |
| ATCATCTCTAACTGATGACC+CGG | 0.566819 | 7_4:+62155168 | None:intergenic |
| ATTCTTTACCATTGACCTTG+AGG | 0.568860 | 7_4:-62154675 | Msa1169220:three_prime_UTR |
| TACAACTGTGGTGGATGTCG+AGG | 0.573197 | 7_4:-62157361 | Msa1169220:CDS |
| GAGCATTGCGGGCTTTAAGA+GGG | 0.574907 | 7_4:-62156975 | Msa1169220:CDS |
| GGTTCATGTTGATCTTGTGA+CGG | 0.575573 | 7_4:-62154641 | Msa1169220:three_prime_UTR |
| GCTGTATCGATTTCTACAGA+GGG | 0.577428 | 7_4:+62157462 | None:intergenic |
| AGGAACATGTATTAAAGGTG+TGG | 0.580118 | 7_4:-62158189 | Msa1169220:five_prime_UTR |
| TAACGTCTGCATTGAGCGGA+GGG | 0.581741 | 7_4:+62156894 | None:intergenic |
| AATTTAATATCTTCTGGCGG+AGG | 0.588204 | 7_4:+62157429 | None:intergenic |
| AAGAAGATAATGGGGAAGAA+GGG | 0.590179 | 7_4:-62157675 | Msa1169220:exon |
| AGATTGAAAACATTGATGGA+AGG | 0.590382 | 7_4:-62156946 | Msa1169220:CDS |
| ACTGAAGAAGGCGAGTCCAA+AGG | 0.594202 | 7_4:-62155266 | Msa1169220:CDS |
| ATCCCACCAATCCTACTTGG+GGG | 0.597567 | 7_4:-62155543 | Msa1169220:CDS |
| AGTTGCTAGGAAACTGAAGA+AGG | 0.598507 | 7_4:-62155278 | Msa1169220:CDS |
| CTGGCCACACCATTGCTCAC+AGG | 0.598982 | 7_4:+62154917 | None:intergenic |
| TGCTGTATCGATTTCTACAG+AGG | 0.603089 | 7_4:+62157461 | None:intergenic |
| TGGTAAACCAAAGGATGAAG+TGG | 0.603448 | 7_4:-62157274 | Msa1169220:CDS |
| TCTTTACCATTGACCTTGAG+GGG | 0.607112 | 7_4:-62154673 | Msa1169220:three_prime_UTR |
| ATCTCAGATTCGTTCTAGGA+GGG | 0.616350 | 7_4:-62156860 | Msa1169220:CDS |
| AATCTCAGATTCGTTCTAGG+AGG | 0.623684 | 7_4:-62156861 | Msa1169220:CDS |
| GATTGAAAACATTGATGGAA+GGG | 0.623713 | 7_4:-62156945 | Msa1169220:CDS |
| CTAACGTCTGCATTGAGCGG+AGG | 0.624271 | 7_4:+62156893 | None:intergenic |
| TGGCAAGTGTACAGTCAGAT+CGG | 0.624328 | 7_4:-62155210 | Msa1169220:CDS |
| CTAGCTTTCGCAGATTGAGT+CGG | 0.624424 | 7_4:+62155103 | None:intergenic |
| GGATGATGACTCCAAAAGCA+TGG | 0.624895 | 7_4:-62155230 | Msa1169220:CDS |
| CATGTTGATCTTGTGACGGG+AGG | 0.627453 | 7_4:-62154637 | Msa1169220:three_prime_UTR |
| GTTGAATTGGACTGAAAGCT+GGG | 0.631003 | 7_4:+62155325 | None:intergenic |
| AAGGGAGCTTGAAACCATGC+GGG | 0.632453 | 7_4:-62156782 | Msa1169220:intron |
| GCCCGACCTTGGGAGAGCCG+TGG | 0.632629 | 7_4:-62155493 | Msa1169220:CDS |
| ACCCGGCAATAGAGTGCCTG+CGG | 0.633713 | 7_4:+62155185 | None:intergenic |
| GAAAGAAACCCATACCCGCA+TGG | 0.636453 | 7_4:+62156768 | None:intergenic |
| TCTTCTGGCGGAGGAAGAGG+CGG | 0.642359 | 7_4:+62157438 | None:intergenic |
| AGGTAACTCTGCATTTATGG+CGG | 0.642380 | 7_4:+62154937 | None:intergenic |
| GCGTCATTCAGGTCCACCGA+AGG | 0.644936 | 7_4:-62154966 | Msa1169220:CDS |
| TATGCGAAGAGAAAGAGCAC+TGG | 0.647271 | 7_4:-62156568 | Msa1169220:CDS |
| TGCTGAAATTACAACTGTGG+TGG | 0.649384 | 7_4:-62157370 | Msa1169220:CDS |
| GGAATGCCAAGAAGATAATG+GGG | 0.650329 | 7_4:-62157683 | Msa1169220:exon |
| TCGAGCCGCAGCATTATAGG+TGG | 0.650702 | 7_4:-62155427 | Msa1169220:CDS |
| AAAATGGCAAACAAGAAAAG+GGG | 0.651135 | 7_4:-62155045 | Msa1169220:CDS |
| TTTAGGCAAGAAGAGCATTG+CGG | 0.651340 | 7_4:-62156987 | Msa1169220:intron |
| TTTCTCCACCTATAATGCTG+CGG | 0.652765 | 7_4:+62155422 | None:intergenic |
| GTTAATTTAATATCTTCTGG+CGG | 0.660808 | 7_4:+62157426 | None:intergenic |
| GTTCTTTATCAACAACGCCA+CGG | 0.668044 | 7_4:+62155476 | None:intergenic |
| CAAGGGAGCTTGAAACCATG+CGG | 0.673697 | 7_4:-62156783 | Msa1169220:CDS |
| GAGCTGGATAGAACGATGGA+TGG | 0.675083 | 7_4:-62155518 | Msa1169220:CDS |
| GGTGGAGCTGGATAGAACGA+TGG | 0.677630 | 7_4:-62155522 | Msa1169220:CDS |
| GCTCTTACAGAAGCACGCAA+GGG | 0.686718 | 7_4:-62156800 | Msa1169220:CDS |
| GAGCTAACGTCTGCATTGAG+CGG | 0.689445 | 7_4:+62156890 | None:intergenic |
| GCAGAGTTACCTGTGAGCAA+TGG | 0.694985 | 7_4:-62154926 | Msa1169220:CDS |
| TCTGTGTTTCATCAACAAGG+AGG | 0.705680 | 7_4:-62154591 | Msa1169220:three_prime_UTR |
| CTGTATCGATTTCTACAGAG+GGG | 0.722657 | 7_4:+62157463 | None:intergenic |
| GTTACCTGTGAGCAATGGTG+TGG | 0.726390 | 7_4:-62154921 | Msa1169220:CDS |
| TGTTGCTGAAATTACAACTG+TGG | 0.743093 | 7_4:-62157373 | Msa1169220:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATAATCAATTTTTTCAA+TGG | + | chr7_4:62154817-62154836 | None:intergenic | 10.0% |
| !!! | AAAATATTTTCAAACTAAAT+TGG | + | chr7_4:62156563-62156582 | None:intergenic | 10.0% |
| !! | AAAATACAAATTGATTAATA+TGG | + | chr7_4:62157969-62157988 | None:intergenic | 10.0% |
| !!! | GCATTTTAAAAAAATGTTAA+AGG | + | chr7_4:62155928-62155947 | None:intergenic | 15.0% |
| !!! | TGAATTTTTTTTAGATGAAT+TGG | - | chr7_4:62156190-62156209 | Msa1169220:intron | 15.0% |
| !!! | TTAAACATTTGTTATAGAAA+GGG | + | chr7_4:62156695-62156714 | None:intergenic | 15.0% |
| !!! | TTTAAACATTTGTTATAGAA+AGG | + | chr7_4:62156696-62156715 | None:intergenic | 15.0% |
| !! | CAATTCATTCAAATTATAAT+AGG | + | chr7_4:62157009-62157028 | None:intergenic | 15.0% |
| !!! | AAAAGTATTAATGAAATGTT+TGG | + | chr7_4:62157919-62157938 | None:intergenic | 15.0% |
| !!! | TTTCATTAATACTTTTGATT+TGG | - | chr7_4:62157923-62157942 | Msa1169220:intron | 15.0% |
| !!! | TTCATTAATACTTTTGATTT+GGG | - | chr7_4:62157924-62157943 | Msa1169220:intron | 15.0% |
| !! | TTTATGAAAAAAAGAGAAAA+AGG | + | chr7_4:62158127-62158146 | None:intergenic | 15.0% |
| !! | ATTCAATCTAAATCAAAGTT+GGG | + | chr7_4:62154701-62154720 | None:intergenic | 20.0% |
| !! | AATTCAATCTAAATCAAAGT+TGG | + | chr7_4:62154702-62154721 | None:intergenic | 20.0% |
| !! | TAATACATACTACTACTAAT+AGG | - | chr7_4:62154725-62154744 | Msa1169220:three_prime_UTR | 20.0% |
| !! | AATACATACTACTACTAATA+GGG | - | chr7_4:62154726-62154745 | Msa1169220:three_prime_UTR | 20.0% |
| !! | TTAAAACATGCTAATATCAA+TGG | - | chr7_4:62154855-62154874 | Msa1169220:three_prime_UTR | 20.0% |
| !! | TGATATAAAGGATCAAATTA+AGG | - | chr7_4:62154967-62154986 | Msa1169220:CDS | 20.0% |
| !! | CAAGTAAATCAAAAAAGAAA+TGG | - | chr7_4:62155156-62155175 | Msa1169220:CDS | 20.0% |
| !! | AAATCAAAAAAGAAATGGTT+TGG | - | chr7_4:62155161-62155180 | Msa1169220:CDS | 20.0% |
| !! | AATCAAAAAAGAAATGGTTT+GGG | - | chr7_4:62155162-62155181 | Msa1169220:CDS | 20.0% |
| !! | TCAGTTAATTTAATATCTTC+TGG | + | chr7_4:62155251-62155270 | None:intergenic | 20.0% |
| !!! | TATCATTTTGAAATACCTTT+CGG | - | chr7_4:62155639-62155658 | Msa1169220:intron | 20.0% |
| !!! | ACTGTCTTTTAAAATCATTT+AGG | - | chr7_4:62155667-62155686 | Msa1169220:intron | 20.0% |
| !!! | AATTTTTATTTTCCGATCAA+TGG | + | chr7_4:62156346-62156365 | None:intergenic | 20.0% |
| !!! | CTAAATTGGTTATAAGTTTT+AGG | + | chr7_4:62156549-62156568 | None:intergenic | 20.0% |
| !! | CTATATAGATCTTCAAAAAT+AGG | + | chr7_4:62156641-62156660 | None:intergenic | 20.0% |
| !! | AACTGAATTAAGCATATTAT+TGG | + | chr7_4:62156910-62156929 | None:intergenic | 20.0% |
| !! | CTGATTATTATATAATCAAC+TGG | + | chr7_4:62157776-62157795 | None:intergenic | 20.0% |
| !! | TATATAATAATCAGAGTGAA+AGG | - | chr7_4:62157782-62157801 | Msa1169220:intron | 20.0% |
| !!! | TCATTAATACTTTTGATTTG+GGG | - | chr7_4:62157925-62157944 | Msa1169220:intron | 20.0% |
| ! | TTTACAGGAACATGTATTAA+AGG | - | chr7_4:62154477-62154496 | Msa1169220:three_prime_UTR | 25.0% |
| !!! | CTTTTTGTTTAAACACGAAT+TGG | - | chr7_4:62154543-62154562 | Msa1169220:three_prime_UTR | 25.0% |
| ! | AAATTTATCTCTCTTGAAGA+AGG | + | chr7_4:62154618-62154637 | None:intergenic | 25.0% |
| !! | TCCTTCTTTTTGTGATATAA+AGG | - | chr7_4:62154955-62154974 | Msa1169220:CDS | 25.0% |
| ! | TCCTTTATATCACAAAAAGA+AGG | + | chr7_4:62154959-62154978 | None:intergenic | 25.0% |
| ! | GTTAATTTAATATCTTCTGG+CGG | + | chr7_4:62155248-62155267 | None:intergenic | 25.0% |
| ! | TCTATATATGCAGAATAATG+AGG | - | chr7_4:62155578-62155597 | Msa1169220:CDS | 25.0% |
| !! | TTATTTGACTTCGTTTGTAA+TGG | - | chr7_4:62155973-62155992 | Msa1169220:intron | 25.0% |
| ! | CCAATCTATAATGAAAATTC+GGG | + | chr7_4:62156011-62156030 | None:intergenic | 25.0% |
| ! | CCCAATCTATAATGAAAATT+CGG | + | chr7_4:62156012-62156031 | None:intergenic | 25.0% |
| !! | CCGAATTTTCATTATAGATT+GGG | - | chr7_4:62156009-62156028 | Msa1169220:intron | 25.0% |
| !! | CGAATTTTCATTATAGATTG+GGG | - | chr7_4:62156010-62156029 | Msa1169220:intron | 25.0% |
| !! | CAATTTGTTCTTTAGATTGT+AGG | + | chr7_4:62156052-62156071 | None:intergenic | 25.0% |
| ! | TTTGAAGATCTATATAGAAG+AGG | - | chr7_4:62156644-62156663 | Msa1169220:CDS | 25.0% |
| ! | ATGACAACTGAAAATAACTT+AGG | - | chr7_4:62156766-62156785 | Msa1169220:intron | 25.0% |
| ! | ATTATGCAAAAAAATCAACG+TGG | + | chr7_4:62156879-62156898 | None:intergenic | 25.0% |
| !! | TTTTTGCCAATAGAGATATT+TGG | - | chr7_4:62156951-62156970 | Msa1169220:CDS | 25.0% |
| ! | GTTTGGATACACATAAAAAT+AGG | + | chr7_4:62157902-62157921 | None:intergenic | 25.0% |
| AATACATGTTCCTGTAAAGA+GGG | + | chr7_4:62154475-62154494 | None:intergenic | 30.0% | |
| TAATACATGTTCCTGTAAAG+AGG | + | chr7_4:62154476-62154495 | None:intergenic | 30.0% | |
| ATCTTTCACTTCATTCATTC+AGG | - | chr7_4:62154576-62154595 | Msa1169220:three_prime_UTR | 30.0% | |
| !!! | TTAGCATGTTTTAATCTGTG+TGG | + | chr7_4:62154849-62154868 | None:intergenic | 30.0% |
| ! | ATTTTCATACCTTTGAGTCA+GGG | + | chr7_4:62155055-62155074 | None:intergenic | 30.0% |
| ! | TATTTTCATACCTTTGAGTC+AGG | + | chr7_4:62155056-62155075 | None:intergenic | 30.0% |
| TTGTAATTTCAGCAACATGA+TGG | + | chr7_4:62155295-62155314 | None:intergenic | 30.0% | |
| ! | TCAAGATTCAAACAGCTTTT+CGG | - | chr7_4:62155426-62155445 | Msa1169220:CDS | 30.0% |
| GCGAACAAATTTGAAAATGA+GGG | + | chr7_4:62155479-62155498 | None:intergenic | 30.0% | |
| AGCGAACAAATTTGAAAATG+AGG | + | chr7_4:62155480-62155499 | None:intergenic | 30.0% | |
| AGATTGAAAACATTGATGGA+AGG | - | chr7_4:62155725-62155744 | Msa1169220:intron | 30.0% | |
| GATTGAAAACATTGATGGAA+GGG | - | chr7_4:62155726-62155745 | Msa1169220:intron | 30.0% | |
| AAATGCTAATCTCTCAACAT+TGG | - | chr7_4:62155942-62155961 | Msa1169220:intron | 30.0% | |
| ! | CCCGAATTTTCATTATAGAT+TGG | - | chr7_4:62156008-62156027 | Msa1169220:intron | 30.0% |
| ! | ATTTTCATTATAGATTGGGG+AGG | - | chr7_4:62156013-62156032 | Msa1169220:intron | 30.0% |
| TAGGAAACAAAAGTGAAGAA+AGG | + | chr7_4:62156622-62156641 | None:intergenic | 30.0% | |
| CACTATCCAAATATCTCTAT+TGG | + | chr7_4:62156960-62156979 | None:intergenic | 30.0% | |
| CAATAGAGATATTTGGATAG+TGG | - | chr7_4:62156958-62156977 | Msa1169220:CDS | 30.0% | |
| ATAGGACATCACATAATATG+CGG | + | chr7_4:62156991-62157010 | None:intergenic | 30.0% | |
| ATCTATGAATCCAATGTTTG+TGG | - | chr7_4:62157105-62157124 | Msa1169220:intron | 30.0% | |
| AGTCCATTAGCAAAAGAAAA+TGG | - | chr7_4:62157610-62157629 | Msa1169220:intron | 30.0% | |
| !!! | TTGCCATTTTCTTTTGCTAA+TGG | + | chr7_4:62157616-62157635 | None:intergenic | 30.0% |
| AGAAAATGGCAAACAAGAAA+AGG | - | chr7_4:62157624-62157643 | Msa1169220:intron | 30.0% | |
| GAAAATGGCAAACAAGAAAA+GGG | - | chr7_4:62157625-62157644 | Msa1169220:intron | 30.0% | |
| AAAATGGCAAACAAGAAAAG+GGG | - | chr7_4:62157626-62157645 | Msa1169220:intron | 30.0% | |
| AGGACAGAAATCATTAAAGT+AGG | - | chr7_4:62157802-62157821 | Msa1169220:intron | 30.0% | |
| GAAACTCTTGATTCTAAATG+TGG | - | chr7_4:62158156-62158175 | Msa1169220:five_prime_UTR | 30.0% | |
| ! | TCTGATTTTTCCCTCTTTAC+AGG | - | chr7_4:62154462-62154481 | Msa1169220:three_prime_UTR | 35.0% |
| AGGAACATGTATTAAAGGTG+TGG | - | chr7_4:62154482-62154501 | Msa1169220:three_prime_UTR | 35.0% | |
| ! | CATGTATTAAAGGTGTGGTT+TGG | - | chr7_4:62154487-62154506 | Msa1169220:three_prime_UTR | 35.0% |
| !! | TATTAAAGGTGTGGTTTGGT+TGG | - | chr7_4:62154491-62154510 | Msa1169220:three_prime_UTR | 35.0% |
| CATACTACTACTAATAGGGA+AGG | - | chr7_4:62154730-62154749 | Msa1169220:three_prime_UTR | 35.0% | |
| ACTACTAATAGGGAAGGATT+AGG | - | chr7_4:62154736-62154755 | Msa1169220:three_prime_UTR | 35.0% | |
| AAGGAATGCCAAGAAGATAA+TGG | - | chr7_4:62154986-62155005 | Msa1169220:CDS | 35.0% | |
| AGGAATGCCAAGAAGATAAT+GGG | - | chr7_4:62154987-62155006 | Msa1169220:CDS | 35.0% | |
| !! | AAGAAGATAATGGGGAAGAA+GGG | - | chr7_4:62154996-62155015 | Msa1169220:CDS | 35.0% |
| AATTTAATATCTTCTGGCGG+AGG | + | chr7_4:62155245-62155264 | None:intergenic | 35.0% | |
| TGTTGCTGAAATTACAACTG+TGG | - | chr7_4:62155298-62155317 | Msa1169220:CDS | 35.0% | |
| ! | TCATTTTGCTGGTAAACCAA+AGG | - | chr7_4:62155388-62155407 | Msa1169220:CDS | 35.0% |
| ! | CAAGATTCAAACAGCTTTTC+GGG | - | chr7_4:62155427-62155446 | Msa1169220:CDS | 35.0% |
| ! | AAGATTCAAACAGCTTTTCG+GGG | - | chr7_4:62155428-62155447 | Msa1169220:CDS | 35.0% |
| !! | CAGAATAATGAGGCTTTAAG+AGG | - | chr7_4:62155588-62155607 | Msa1169220:CDS | 35.0% |
| AAAAGACAGTTTAGTCCGAA+AGG | + | chr7_4:62155657-62155676 | None:intergenic | 35.0% | |
| GGTGAGATTGAAAACATTGA+TGG | - | chr7_4:62155721-62155740 | Msa1169220:intron | 35.0% | |
| AAACGAAGTCAAATAAGCGT+TGG | + | chr7_4:62155969-62155988 | None:intergenic | 35.0% | |
| ATTATAGATTGGGGAGGAAT+GGG | - | chr7_4:62156019-62156038 | Msa1169220:intron | 35.0% | |
| CTCATACTTGCTCAGTAATT+TGG | + | chr7_4:62156078-62156097 | None:intergenic | 35.0% | |
| CAAATTACTGAGCAAGTATG+AGG | - | chr7_4:62156076-62156095 | Msa1169220:intron | 35.0% | |
| CTTGTTAACTTAGATATGCG+AGG | - | chr7_4:62156159-62156178 | Msa1169220:intron | 35.0% | |
| CAGAACATAACATGAAAGCT+TGG | + | chr7_4:62156267-62156286 | None:intergenic | 35.0% | |
| CAAGCTTTCATGTTATGTTC+TGG | - | chr7_4:62156265-62156284 | Msa1169220:intron | 35.0% | |
| ATATGTCAACGACCATTGAT+CGG | - | chr7_4:62156331-62156350 | Msa1169220:intron | 35.0% | |
| AACTGCTGATGAGAAAATCA+CGG | + | chr7_4:62156429-62156448 | None:intergenic | 35.0% | |
| CAACAACTTCAAGTAGGATA+AGG | + | chr7_4:62156517-62156536 | None:intergenic | 35.0% | |
| AAAGAGCAACAACTTCAAGT+AGG | + | chr7_4:62156523-62156542 | None:intergenic | 35.0% | |
| ! | GTGAAGAAAGGTGACAATTT+TGG | + | chr7_4:62156610-62156629 | None:intergenic | 35.0% |
| TAGAAGAGGATGAAAACAAG+AGG | - | chr7_4:62156658-62156677 | Msa1169220:intron | 35.0% | |
| AGAAGAGGATGAAAACAAGA+GGG | - | chr7_4:62156659-62156678 | Msa1169220:intron | 35.0% | |
| GAAGATAGTGACTACATGAA+AGG | + | chr7_4:62156810-62156829 | None:intergenic | 35.0% | |
| AAAAAAATCAACGTGGCAGT+GGG | + | chr7_4:62156872-62156891 | None:intergenic | 35.0% | |
| AATGTATTTCAGAGTTGAGC+TGG | + | chr7_4:62157297-62157316 | None:intergenic | 35.0% | |
| TCCATCAGTTCCAAGTTATA+TGG | - | chr7_4:62157543-62157562 | Msa1169220:intron | 35.0% | |
| ACCATATAACTTGGAACTGA+TGG | + | chr7_4:62157547-62157566 | None:intergenic | 35.0% | |
| ATTCTTTACCATTGACCTTG+AGG | - | chr7_4:62157996-62158015 | Msa1169220:intron | 35.0% | |
| TTCTTTACCATTGACCTTGA+GGG | - | chr7_4:62157997-62158016 | Msa1169220:intron | 35.0% | |
| ! | CTTGTTGATGAAACACAGAA+TGG | + | chr7_4:62158079-62158098 | None:intergenic | 35.0% |
| CATTCTGTGTTTCATCAACA+AGG | - | chr7_4:62158077-62158096 | Msa1169220:intron | 35.0% | |
| ! | TCTCTTGAAGAAGGTGCAAT+GGG | + | chr7_4:62154609-62154628 | None:intergenic | 40.0% |
| GGAAGGATTAGGAGTTTGAA+TGG | - | chr7_4:62154747-62154766 | Msa1169220:three_prime_UTR | 40.0% | |
| GGAATGCCAAGAAGATAATG+GGG | - | chr7_4:62154988-62155007 | Msa1169220:CDS | 40.0% | |
| CTTCTTCCCCATTATCTTCT+TGG | + | chr7_4:62154997-62155016 | None:intergenic | 40.0% | |
| !! | CAAGAAGATAATGGGGAAGA+AGG | - | chr7_4:62154995-62155014 | Msa1169220:CDS | 40.0% |
| TAATGGGGAAGAAGGGAAAT+TGG | - | chr7_4:62155003-62155022 | Msa1169220:CDS | 40.0% | |
| !! | CTGTATCGATTTCTACAGAG+GGG | + | chr7_4:62155211-62155230 | None:intergenic | 40.0% |
| !! | GCTGTATCGATTTCTACAGA+GGG | + | chr7_4:62155212-62155231 | None:intergenic | 40.0% |
| !! | TGCTGTATCGATTTCTACAG+AGG | + | chr7_4:62155213-62155232 | None:intergenic | 40.0% |
| TGCTGAAATTACAACTGTGG+TGG | - | chr7_4:62155301-62155320 | Msa1169220:CDS | 40.0% | |
| TGGTAAACCAAAGGATGAAG+TGG | - | chr7_4:62155397-62155416 | Msa1169220:CDS | 40.0% | |
| !! | TTTAGGCAAGAAGAGCATTG+CGG | - | chr7_4:62155684-62155703 | Msa1169220:intron | 40.0% |
| !! | ATGGCTTGGCGTTTTACAAT+CGG | + | chr7_4:62155752-62155771 | None:intergenic | 40.0% |
| TGCAATCTCAGATTCGTTCT+AGG | - | chr7_4:62155807-62155826 | Msa1169220:intron | 40.0% | |
| ! | AATCTCAGATTCGTTCTAGG+AGG | - | chr7_4:62155810-62155829 | Msa1169220:intron | 40.0% |
| !! | ATCTCAGATTCGTTCTAGGA+GGG | - | chr7_4:62155811-62155830 | Msa1169220:intron | 40.0% |
| CAGAATGTTAGAGGAGAATC+AGG | - | chr7_4:62155835-62155854 | Msa1169220:intron | 40.0% | |
| CATTATAGATTGGGGAGGAA+TGG | - | chr7_4:62156018-62156037 | Msa1169220:intron | 40.0% | |
| ACTGCTGATGAGAAAATCAC+GGG | + | chr7_4:62156428-62156447 | None:intergenic | 40.0% | |
| GAAGAGGATGAAAACAAGAG+GGG | - | chr7_4:62156660-62156679 | Msa1169220:intron | 40.0% | |
| AAGAGGATGAAAACAAGAGG+GGG | - | chr7_4:62156661-62156680 | Msa1169220:intron | 40.0% | |
| AGAGGTTTAAGCAGAGGAAA+TGG | + | chr7_4:62156837-62156856 | None:intergenic | 40.0% | |
| CAAAAAAATCAACGTGGCAG+TGG | + | chr7_4:62156873-62156892 | None:intergenic | 40.0% | |
| GTTCTTTATCAACAACGCCA+CGG | + | chr7_4:62157198-62157217 | None:intergenic | 40.0% | |
| TTTCTCCACCTATAATGCTG+CGG | + | chr7_4:62157252-62157271 | None:intergenic | 40.0% | |
| TTTCAGAGTTGAGCTGGAAA+CGG | + | chr7_4:62157291-62157310 | None:intergenic | 40.0% | |
| GTTGAATTGGACTGAAAGCT+GGG | + | chr7_4:62157349-62157368 | None:intergenic | 40.0% | |
| AGTTGAATTGGACTGAAAGC+TGG | + | chr7_4:62157350-62157369 | None:intergenic | 40.0% | |
| CAATTCAACTCCTACTAAGC+CGG | - | chr7_4:62157360-62157379 | Msa1169220:CDS | 40.0% | |
| AATTCAACTCCTACTAAGCC+GGG | - | chr7_4:62157361-62157380 | Msa1169220:CDS | 40.0% | |
| AGTTGCTAGGAAACTGAAGA+AGG | - | chr7_4:62157393-62157412 | Msa1169220:CDS | 40.0% | |
| ATCATCTCTAACTGATGACC+CGG | + | chr7_4:62157506-62157525 | None:intergenic | 40.0% | |
| AAACAAGAAAAGGGGTCCTT+TGG | - | chr7_4:62157634-62157653 | Msa1169220:CDS | 40.0% | |
| TTTATGGCGGTTTCTACCTT+CGG | + | chr7_4:62157724-62157743 | None:intergenic | 40.0% | |
| AGGTAACTCTGCATTTATGG+CGG | + | chr7_4:62157737-62157756 | None:intergenic | 40.0% | |
| CACAGGTAACTCTGCATTTA+TGG | + | chr7_4:62157740-62157759 | None:intergenic | 40.0% | |
| TCTTTACCATTGACCTTGAG+GGG | - | chr7_4:62157998-62158017 | Msa1169220:intron | 40.0% | |
| AACCAAATTTCTTCCCCTCA+AGG | + | chr7_4:62158014-62158033 | None:intergenic | 40.0% | |
| GGTTCATGTTGATCTTGTGA+CGG | - | chr7_4:62158030-62158049 | Msa1169220:intron | 40.0% | |
| GTTCATGTTGATCTTGTGAC+GGG | - | chr7_4:62158031-62158050 | Msa1169220:intron | 40.0% | |
| TCTGTGTTTCATCAACAAGG+AGG | - | chr7_4:62158080-62158099 | Msa1169220:intron | 40.0% | |
| ! | CTCTCTTGAAGAAGGTGCAA+TGG | + | chr7_4:62154610-62154629 | None:intergenic | 45.0% |
| ! | GCTGCAGTTTCTCATTTTGC+TGG | - | chr7_4:62155377-62155396 | Msa1169220:CDS | 45.0% |
| ! | ATTGCTGCCACTTCATCCTT+TGG | + | chr7_4:62155407-62155426 | None:intergenic | 45.0% |
| !! | AACAGCTTTTCGGGGATACT+TGG | - | chr7_4:62155436-62155455 | Msa1169220:CDS | 45.0% |
| !! | TTAGGCAAGAAGAGCATTGC+GGG | - | chr7_4:62155685-62155704 | Msa1169220:intron | 45.0% |
| TAGGAGGGTCAGAATGTTAG+AGG | - | chr7_4:62155826-62155845 | Msa1169220:intron | 45.0% | |
| ! | TATGCGAAGAGAAAGAGCAC+TGG | - | chr7_4:62156103-62156122 | Msa1169220:intron | 45.0% |
| GGCTTATGCATTCACTCATC+AGG | - | chr7_4:62156124-62156143 | Msa1169220:intron | 45.0% | |
| TTGGTGGGATCCACAAACAT+TGG | + | chr7_4:62157118-62157137 | None:intergenic | 45.0% | |
| TTCAGAGTTGAGCTGGAAAC+GGG | + | chr7_4:62157290-62157309 | None:intergenic | 45.0% | |
| CGGCTTAGTAGGAGTTGAAT+TGG | + | chr7_4:62157362-62157381 | None:intergenic | 45.0% | |
| TCCAAAGGGAAGTTGGGTTA+TGG | - | chr7_4:62157420-62157439 | Msa1169220:CDS | 45.0% | |
| TCCATAACCCAACTTCCCTT+TGG | + | chr7_4:62157424-62157443 | None:intergenic | 45.0% | |
| GGATGATGACTCCAAAAGCA+TGG | - | chr7_4:62157441-62157460 | Msa1169220:CDS | 45.0% | |
| ! | CTGTACACTTGCCATGCTTT+TGG | + | chr7_4:62157455-62157474 | None:intergenic | 45.0% |
| TGGCAAGTGTACAGTCAGAT+CGG | - | chr7_4:62157461-62157480 | Msa1169220:CDS | 45.0% | |
| TGAGTCGGCACCATATAACT+TGG | + | chr7_4:62157556-62157575 | None:intergenic | 45.0% | |
| ! | CTAGCTTTCGCAGATTGAGT+CGG | + | chr7_4:62157571-62157590 | None:intergenic | 45.0% |
| !! | GAAAAAGCGCCTTTCTTACC+CGG | - | chr7_4:62157663-62157682 | Msa1169220:CDS | 45.0% |
| TTTCTTCCCCTCAAGGTCAA+TGG | + | chr7_4:62158007-62158026 | None:intergenic | 45.0% | |
| GACCTTGAGGGGAAGAAATT+TGG | - | chr7_4:62158009-62158028 | Msa1169220:intron | 45.0% | |
| !!! | ATTTTAATTATAATTACAAA+AGG | + | chr7_4:62156740-62156759 | None:intergenic | 5.0% |
| ATATCTTCTGGCGGAGGAAG+AGG | + | chr7_4:62155239-62155258 | None:intergenic | 50.0% | |
| !! | TACAACTGTGGTGGATGTCG+AGG | - | chr7_4:62155310-62155329 | Msa1169220:CDS | 50.0% |
| GCTGTCTGAACAGAACGAAC+AGG | + | chr7_4:62155338-62155357 | None:intergenic | 50.0% | |
| !! | AGAGCATTGCGGGCTTTAAG+AGG | - | chr7_4:62155695-62155714 | Msa1169220:intron | 50.0% |
| !! | GAGCATTGCGGGCTTTAAGA+GGG | - | chr7_4:62155696-62155715 | Msa1169220:intron | 50.0% |
| TAACGTCTGCATTGAGCGGA+GGG | + | chr7_4:62155780-62155799 | None:intergenic | 50.0% | |
| GAGCTAACGTCTGCATTGAG+CGG | + | chr7_4:62155784-62155803 | None:intergenic | 50.0% | |
| ! | AGCTCTTACAGAAGCACGCA+AGG | - | chr7_4:62155870-62155889 | Msa1169220:intron | 50.0% |
| ! | GCTCTTACAGAAGCACGCAA+GGG | - | chr7_4:62155871-62155890 | Msa1169220:intron | 50.0% |
| CAAGGGAGCTTGAAACCATG+CGG | - | chr7_4:62155888-62155907 | Msa1169220:intron | 50.0% | |
| AAGGGAGCTTGAAACCATGC+GGG | - | chr7_4:62155889-62155908 | Msa1169220:intron | 50.0% | |
| AGCTTGAAACCATGCGGGTA+TGG | - | chr7_4:62155894-62155913 | Msa1169220:intron | 50.0% | |
| GCTTGAAACCATGCGGGTAT+GGG | - | chr7_4:62155895-62155914 | Msa1169220:intron | 50.0% | |
| GAAAGAAACCCATACCCGCA+TGG | + | chr7_4:62155906-62155925 | None:intergenic | 50.0% | |
| GGTTGCAGAGGTTTAAGCAG+AGG | + | chr7_4:62156843-62156862 | None:intergenic | 50.0% | |
| AATCAACGTGGCAGTGGGAA+AGG | + | chr7_4:62156867-62156886 | None:intergenic | 50.0% | |
| TGGATCCCACCAATCCTACT+TGG | - | chr7_4:62157125-62157144 | Msa1169220:intron | 50.0% | |
| GGATCCCACCAATCCTACTT+GGG | - | chr7_4:62157126-62157145 | Msa1169220:intron | 50.0% | |
| GATCCCACCAATCCTACTTG+GGG | - | chr7_4:62157127-62157146 | Msa1169220:intron | 50.0% | |
| ATCCCACCAATCCTACTTGG+GGG | - | chr7_4:62157128-62157147 | Msa1169220:intron | 50.0% | |
| GAGCTGGATAGAACGATGGA+TGG | - | chr7_4:62157153-62157172 | Msa1169220:intron | 50.0% | |
| AGTTCGAGCCGCAGCATTAT+AGG | - | chr7_4:62157241-62157260 | Msa1169220:CDS | 50.0% | |
| CTAGCAACTGAAGCAGAACC+CGG | + | chr7_4:62157382-62157401 | None:intergenic | 50.0% | |
| ACTGAAGAAGGCGAGTCCAA+AGG | - | chr7_4:62157405-62157424 | Msa1169220:CDS | 50.0% | |
| CTGAAGAAGGCGAGTCCAAA+GGG | - | chr7_4:62157406-62157425 | Msa1169220:CDS | 50.0% | |
| CGACTCAATCTGCGAAAGCT+AGG | - | chr7_4:62157569-62157588 | Msa1169220:intron | 50.0% | |
| !!! | GCGCTTTTTCGCAGTTCCAA+AGG | + | chr7_4:62157653-62157672 | None:intergenic | 50.0% |
| GCAGAGTTACCTGTGAGCAA+TGG | - | chr7_4:62157745-62157764 | Msa1169220:intron | 50.0% | |
| GTTACCTGTGAGCAATGGTG+TGG | - | chr7_4:62157750-62157769 | Msa1169220:intron | 50.0% | |
| ! | CATGTTGATCTTGTGACGGG+AGG | - | chr7_4:62158034-62158053 | Msa1169220:intron | 50.0% |
| AGCTCTCAGCCCTGACTCAA+AGG | - | chr7_4:62155043-62155062 | Msa1169220:CDS | 55.0% | |
| !! | ATTGCGGGCTTTAAGAGGGC+TGG | - | chr7_4:62155700-62155719 | Msa1169220:intron | 55.0% |
| !! | CATTGAGCGGAGGGTACTCA+TGG | + | chr7_4:62155771-62155790 | None:intergenic | 55.0% |
| CTAACGTCTGCATTGAGCGG+AGG | + | chr7_4:62155781-62155800 | None:intergenic | 55.0% | |
| AGTGGGAAAGGAGGTTGCAG+AGG | + | chr7_4:62156855-62156874 | None:intergenic | 55.0% | |
| ! | CACCCCCAAGTAGGATTGGT+GGG | + | chr7_4:62157133-62157152 | None:intergenic | 55.0% |
| GGTGGAGCTGGATAGAACGA+TGG | - | chr7_4:62157149-62157168 | Msa1169220:intron | 55.0% | |
| TCGAGCCGCAGCATTATAGG+TGG | - | chr7_4:62157244-62157263 | Msa1169220:CDS | 55.0% | |
| !!! | CCAGGATTTTGGCTCGCTAC+TGG | + | chr7_4:62157322-62157341 | None:intergenic | 55.0% |
| CCAGTAGCGAGCCAAAATCC+TGG | - | chr7_4:62157319-62157338 | Msa1169220:CDS | 55.0% | |
| ! | AGCTGGGTGAGCCAGGATTT+TGG | + | chr7_4:62157333-62157352 | None:intergenic | 55.0% |
| GAAGCAGAACCCGGCTTAGT+AGG | + | chr7_4:62157373-62157392 | None:intergenic | 55.0% | |
| CGGGTTCTGCTTCAGTTGCT+AGG | - | chr7_4:62157380-62157399 | Msa1169220:CDS | 55.0% | |
| AGGCGAGTCCAAAGGGAAGT+TGG | - | chr7_4:62157413-62157432 | Msa1169220:CDS | 55.0% | |
| GGCGAGTCCAAAGGGAAGTT+GGG | - | chr7_4:62157414-62157433 | Msa1169220:CDS | 55.0% | |
| ! | TACAGTCAGATCGGTTCCGC+AGG | - | chr7_4:62157470-62157489 | Msa1169220:CDS | 55.0% |
| TTCCGCAGGCACTCTATTGC+CGG | - | chr7_4:62157484-62157503 | Msa1169220:CDS | 55.0% | |
| ATGGCGGTTTCTACCTTCGG+TGG | + | chr7_4:62157721-62157740 | None:intergenic | 55.0% | |
| TCTTCTGGCGGAGGAAGAGG+CGG | + | chr7_4:62155236-62155255 | None:intergenic | 60.0% | |
| !! | AGCGGAGGGTACTCATGGCT+TGG | + | chr7_4:62155766-62155785 | None:intergenic | 60.0% |
| CAACGTGGCAGTGGGAAAGG+AGG | + | chr7_4:62156864-62156883 | None:intergenic | 60.0% | |
| CCACCCCCAAGTAGGATTGG+TGG | + | chr7_4:62157134-62157153 | None:intergenic | 60.0% | |
| CCACCAATCCTACTTGGGGG+TGG | - | chr7_4:62157131-62157150 | Msa1169220:intron | 60.0% | |
| GCTCCACCCCCAAGTAGGAT+TGG | + | chr7_4:62157137-62157156 | None:intergenic | 60.0% | |
| ATCCTACTTGGGGGTGGAGC+TGG | - | chr7_4:62157137-62157156 | Msa1169220:intron | 60.0% | |
| ATCCAGCTCCACCCCCAAGT+AGG | + | chr7_4:62157142-62157161 | None:intergenic | 60.0% | |
| ATGGATGGCTGCCCGACCTT+GGG | - | chr7_4:62157168-62157187 | Msa1169220:intron | 60.0% | |
| GACTGAAAGCTGGGTGAGCC+AGG | + | chr7_4:62157340-62157359 | None:intergenic | 60.0% | |
| TCCGCAGGCACTCTATTGCC+GGG | - | chr7_4:62157485-62157504 | Msa1169220:CDS | 60.0% | |
| ! | ACCCGGCAATAGAGTGCCTG+CGG | + | chr7_4:62157489-62157508 | None:intergenic | 60.0% |
| CAGGCGAAGCCGGGTAAGAA+AGG | + | chr7_4:62157675-62157694 | None:intergenic | 60.0% | |
| GGTGGACCTGAATGACGCCT+TGG | + | chr7_4:62157703-62157722 | None:intergenic | 60.0% | |
| GCGTCATTCAGGTCCACCGA+AGG | - | chr7_4:62157705-62157724 | Msa1169220:intron | 60.0% | |
| CTGGCCACACCATTGCTCAC+AGG | + | chr7_4:62157757-62157776 | None:intergenic | 60.0% | |
| GATGGATGGCTGCCCGACCT+TGG | - | chr7_4:62157167-62157186 | Msa1169220:intron | 65.0% | |
| ACAACGCCACGGCTCTCCCA+AGG | + | chr7_4:62157187-62157206 | None:intergenic | 65.0% | |
| GAATGACGCCTTGGCCTCGC+AGG | + | chr7_4:62157694-62157713 | None:intergenic | 65.0% | |
| ! | GCGAGGCCAAGGCGTCATTC+AGG | - | chr7_4:62157694-62157713 | Msa1169220:five_prime_UTR | 65.0% |
| GCCACGGCTCTCCCAAGGTC+GGG | + | chr7_4:62157182-62157201 | None:intergenic | 70.0% | |
| CGCCACGGCTCTCCCAAGGT+CGG | + | chr7_4:62157183-62157202 | None:intergenic | 70.0% | |
| CTTACCCGGCTTCGCCTGCG+AGG | - | chr7_4:62157677-62157696 | Msa1169220:exon | 70.0% | |
| TTGGCCTCGCAGGCGAAGCC+GGG | + | chr7_4:62157684-62157703 | None:intergenic | 70.0% | |
| CTTGGCCTCGCAGGCGAAGC+CGG | + | chr7_4:62157685-62157704 | None:intergenic | 70.0% | |
| GCCCGACCTTGGGAGAGCCG+TGG | - | chr7_4:62157178-62157197 | Msa1169220:intron | 75.0% | |
| CGGCTTCGCCTGCGAGGCCA+AGG | - | chr7_4:62157683-62157702 | Msa1169220:exon | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 62154420 | 62158273 | 62154420 | ID=Msa1169220;Name=Msa1169220 |
| chr7_4 | mRNA | 62154420 | 62158273 | 62154420 | ID=Msa1169220-mRNA-1;Parent=Msa1169220;Name=Msa1169220-mRNA-1;_AED=0.06;_eAED=0.06;_QI=206|1|1|1|0.8|0.83|6|493|468 |
| chr7_4 | exon | 62154420 | 62155611 | 62154420 | ID=Msa1169220-mRNA-1:exon:19663;Parent=Msa1169220-mRNA-1 |
| chr7_4 | exon | 62156548 | 62156667 | 62156548 | ID=Msa1169220-mRNA-1:exon:19662;Parent=Msa1169220-mRNA-1 |
| chr7_4 | exon | 62156783 | 62157004 | 62156783 | ID=Msa1169220-mRNA-1:exon:19661;Parent=Msa1169220-mRNA-1 |
| chr7_4 | exon | 62157236 | 62157541 | 62157236 | ID=Msa1169220-mRNA-1:exon:19660;Parent=Msa1169220-mRNA-1 |
| chr7_4 | exon | 62157629 | 62157716 | 62157629 | ID=Msa1169220-mRNA-1:exon:19659;Parent=Msa1169220-mRNA-1 |
| chr7_4 | exon | 62158096 | 62158273 | 62158096 | ID=Msa1169220-mRNA-1:exon:19658;Parent=Msa1169220-mRNA-1 |
| chr7_4 | five_prime_UTR | 62158096 | 62158273 | 62158096 | ID=Msa1169220-mRNA-1:five_prime_utr;Parent=Msa1169220-mRNA-1 |
| chr7_4 | five_prime_UTR | 62157689 | 62157716 | 62157689 | ID=Msa1169220-mRNA-1:five_prime_utr;Parent=Msa1169220-mRNA-1 |
| chr7_4 | CDS | 62157629 | 62157688 | 62157629 | ID=Msa1169220-mRNA-1:cds;Parent=Msa1169220-mRNA-1 |
| chr7_4 | CDS | 62157236 | 62157541 | 62157236 | ID=Msa1169220-mRNA-1:cds;Parent=Msa1169220-mRNA-1 |
| chr7_4 | CDS | 62156783 | 62157004 | 62156783 | ID=Msa1169220-mRNA-1:cds;Parent=Msa1169220-mRNA-1 |
| chr7_4 | CDS | 62156548 | 62156667 | 62156548 | ID=Msa1169220-mRNA-1:cds;Parent=Msa1169220-mRNA-1 |
| chr7_4 | CDS | 62154913 | 62155611 | 62154913 | ID=Msa1169220-mRNA-1:cds;Parent=Msa1169220-mRNA-1 |
| chr7_4 | three_prime_UTR | 62154420 | 62154912 | 62154420 | ID=Msa1169220-mRNA-1:three_prime_utr;Parent=Msa1169220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
