Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0471620 | XP_003602287.2 | 99.561 | 228 | 1 | 0 | 1 | 228 | 1 | 228 | 6.92e-167 | 469 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0471620 | sp|G7ID19|RBP2_MEDTR | 46.743 | 261 | 97 | 14 | 1 | 228 | 1 | 252 | 3.45e-57 | 184 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0471620 | G7J7H7 | 99.561 | 228 | 1 | 0 | 1 | 228 | 1 | 228 | 3.30e-167 | 469 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008850 | Msa0471620 | -0.804483 | 2.114425e-49 | -8.615850e-47 |
| Msa0164360 | Msa0471620 | -0.809848 | 1.544400e-50 | -8.615850e-47 |
| Msa0425200 | Msa0471620 | 0.884058 | 2.650814e-71 | -8.615850e-47 |
| Msa0471620 | Msa1285800 | 0.817947 | 2.531841e-52 | -8.615850e-47 |
| Msa0471620 | Msa1335970 | 0.807894 | 4.044667e-50 | -8.615850e-47 |
| Msa0471620 | Msa1447560 | -0.809599 | 1.747317e-50 | -8.615850e-47 |
| Msa0336270 | Msa0471620 | -0.800835 | 1.196355e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0471620 | MtrunA17_Chr3g0127231 | 99.561 | 228 | 1 | 0 | 1 | 228 | 1 | 228 | 6.36e-171 | 469 |
| Msa0471620 | MtrunA17_Chr1g0202131 | 46.743 | 261 | 97 | 14 | 1 | 228 | 1 | 252 | 2.54e-58 | 184 |
| Msa0471620 | MtrunA17_Chr6g0463441 | 44.800 | 250 | 109 | 10 | 1 | 225 | 1 | 246 | 4.07e-56 | 179 |
| Msa0471620 | MtrunA17_Chr3g0135941 | 44.776 | 134 | 57 | 3 | 102 | 219 | 90 | 222 | 2.23e-30 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0471620 | AT1G76940.1 | 43.515 | 239 | 118 | 6 | 1 | 228 | 1 | 233 | 1.89e-52 | 169 |
| Msa0471620 | AT1G21320.2 | 40.711 | 253 | 125 | 6 | 1 | 228 | 1 | 253 | 7.53e-51 | 166 |
| Msa0471620 | AT1G21320.5 | 43.333 | 210 | 102 | 4 | 36 | 228 | 1 | 210 | 5.17e-46 | 152 |
| Msa0471620 | AT1G21320.3 | 43.128 | 211 | 103 | 4 | 35 | 228 | 46 | 256 | 2.87e-45 | 152 |
| Msa0471620 | AT1G76940.2 | 43.860 | 228 | 79 | 8 | 1 | 228 | 1 | 179 | 3.94e-45 | 149 |
| Msa0471620 | AT1G21320.1 | 43.128 | 211 | 103 | 4 | 35 | 228 | 211 | 421 | 3.78e-44 | 153 |
| Msa0471620 | AT1G76940.3 | 34.161 | 161 | 90 | 5 | 1 | 150 | 1 | 156 | 2.36e-15 | 72.0 |
| Msa0471620 | AT1G21320.4 | 34.586 | 133 | 70 | 4 | 35 | 150 | 211 | 343 | 2.27e-12 | 65.9 |
Find 107 sgRNAs with CRISPR-Local
Find 494 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGTCATGTCTGACGCTTAT+TGG | 0.193305 | 3_3:-74010101 | Msa0471620:exon |
| AAAATTTGGTAAGTTGGTTT+TGG | 0.215497 | 3_3:+74003629 | None:intergenic |
| TTACTGCTCCTGCGAATATC+TGG | 0.257879 | 3_3:-74003794 | Msa0471620:three_prime_UTR |
| ACCGCAACTCGGTCAATTTA+CGG | 0.265379 | 3_3:-74004239 | Msa0471620:CDS |
| GTCAGTACGGGGACGTTTGC+CGG | 0.281742 | 3_3:+74010038 | None:intergenic |
| ATGTAGGAATCGCGCGTATT+GGG | 0.293682 | 3_3:-74004031 | Msa0471620:intron |
| TGATTCTCATGTCACAAGTA+TGG | 0.302346 | 3_3:-74005745 | Msa0471620:CDS |
| CACCACTTAATTCCAGGATT+TGG | 0.309261 | 3_3:+74005691 | None:intergenic |
| GCCTTCCACCACTTAATTCC+AGG | 0.321168 | 3_3:+74005685 | None:intergenic |
| TTTCTCTGAATTGTCTTGTT+TGG | 0.333795 | 3_3:-74003842 | Msa0471620:three_prime_UTR |
| GCAGATTTCATCTCATGGTT+CGG | 0.343063 | 3_3:-74005817 | Msa0471620:intron |
| GGTATAAGTTTGTTTCTTGA+AGG | 0.369753 | 3_3:-74003821 | Msa0471620:three_prime_UTR |
| CAGATTTCATCTCATGGTTC+GGG | 0.373471 | 3_3:-74005816 | Msa0471620:CDS |
| ACGTTTGCCGGGGATGGTAG+GGG | 0.374467 | 3_3:+74010050 | None:intergenic |
| TATGTAGGAATCGCGCGTAT+TGG | 0.380255 | 3_3:-74004032 | Msa0471620:intron |
| GGACGTTTGCCGGGGATGGT+AGG | 0.394051 | 3_3:+74010048 | None:intergenic |
| GACGTTTGCCGGGGATGGTA+GGG | 0.408483 | 3_3:+74010049 | None:intergenic |
| TTCCAATTCGCTCGCAACCC+TGG | 0.411050 | 3_3:-74004216 | Msa0471620:CDS |
| ATTACGGAGGTAACGCTCAT+AGG | 0.414276 | 3_3:+74006352 | None:intergenic |
| GCTCGCAACCCTGGGAGGTC+AGG | 0.419951 | 3_3:-74004207 | Msa0471620:CDS |
| AGAATCATCAATAGAATGAC+TGG | 0.421510 | 3_3:+74005761 | None:intergenic |
| AACCCTGGGAGGTCAGGTGG+CGG | 0.429538 | 3_3:-74004201 | Msa0471620:CDS |
| TCAGTACGGGGACGTTTGCC+GGG | 0.438662 | 3_3:+74010039 | None:intergenic |
| TCCCAGGGTTGCGAGCGAAT+TGG | 0.438678 | 3_3:+74004214 | None:intergenic |
| CGTTTGCCGGGGATGGTAGG+GGG | 0.445448 | 3_3:+74010051 | None:intergenic |
| ATTCGGTATCTCTAATTACT+TGG | 0.450640 | 3_3:+74006387 | None:intergenic |
| TGTCTCGGGCGTTCATAACT+TGG | 0.451494 | 3_3:-74006447 | Msa0471620:CDS |
| ATGCTCACTACAAACATGTA+TGG | 0.452235 | 3_3:+74003752 | None:intergenic |
| ACTTCTTTGTAGCCAACAAA+AGG | 0.466417 | 3_3:+74005486 | None:intergenic |
| GGGAGCGTGCTGCTGAGATT+CGG | 0.469974 | 3_3:+74010071 | None:intergenic |
| TCCAATTCGCTCGCAACCCT+GGG | 0.472195 | 3_3:-74004215 | Msa0471620:CDS |
| CGTTGAATTATGCATTCTAC+AGG | 0.475820 | 3_3:-74004165 | Msa0471620:intron |
| ATGGCAGTTGCTGCATGAGC+CGG | 0.479544 | 3_3:+74005318 | None:intergenic |
| TGCTACCAATACACTATTTG+TGG | 0.482749 | 3_3:-74005640 | Msa0471620:CDS |
| TACTGCTCCTGCGAATATCT+GGG | 0.485124 | 3_3:-74003793 | Msa0471620:three_prime_UTR |
| TTGCTGCAGATTTCATCTCA+TGG | 0.485693 | 3_3:-74005822 | Msa0471620:intron |
| TGCCCGCCACCTGACCTCCC+AGG | 0.486471 | 3_3:+74004198 | None:intergenic |
| AAATAATTAATACCGCATTA+CGG | 0.491279 | 3_3:+74006336 | None:intergenic |
| GAATTACAATTGCTTTCGTT+AGG | 0.493387 | 3_3:-74003965 | Msa0471620:three_prime_UTR |
| ACCCTCCACAAATAGTGTAT+TGG | 0.494925 | 3_3:+74005635 | None:intergenic |
| CAGTCTACTAGAACCATTGA+TGG | 0.495884 | 3_3:-74005792 | Msa0471620:CDS |
| ACCCTGGGAGGTCAGGTGGC+GGG | 0.496699 | 3_3:-74004200 | Msa0471620:CDS |
| CCTAGCAAACGAATTTCAAA+AGG | 0.496878 | 3_3:+74003931 | None:intergenic |
| TTTCCCCACGACGATGATAG+AGG | 0.497115 | 3_3:-74006416 | Msa0471620:CDS |
| GATTCTCATGTCACAAGTAT+GGG | 0.497759 | 3_3:-74005744 | Msa0471620:CDS |
| ATAGGATGCATCAAGGGATT+CGG | 0.501338 | 3_3:+74006370 | None:intergenic |
| ACGGGGACGTTTGCCGGGGA+TGG | 0.501626 | 3_3:+74010044 | None:intergenic |
| GTTGTGTTTCTGTTGAGTTA+AGG | 0.504818 | 3_3:-74010202 | Msa0471620:five_prime_UTR |
| CTGAATACCGTAGTCAGTAC+GGG | 0.508975 | 3_3:+74010026 | None:intergenic |
| GTAATTCTCGACTGAAAGGC+TGG | 0.514181 | 3_3:+74003981 | None:intergenic |
| ACTGAATACCGTAGTCAGTA+CGG | 0.515403 | 3_3:+74010025 | None:intergenic |
| TAATAGTCATCTAACAACTT+AGG | 0.517774 | 3_3:+74003701 | None:intergenic |
| AAATGTAAAAGACCAAATCC+TGG | 0.525445 | 3_3:-74005703 | Msa0471620:CDS |
| CCAGGTGGAAGTGAATGGTC+AGG | 0.532724 | 3_3:+74005663 | None:intergenic |
| CGCAACCCTGGGAGGTCAGG+TGG | 0.536874 | 3_3:-74004204 | Msa0471620:CDS |
| GCCCGCCACCTGACCTCCCA+GGG | 0.537819 | 3_3:+74004199 | None:intergenic |
| AGCGTCAGACATGACGGTGT+TGG | 0.542130 | 3_3:+74010107 | None:intergenic |
| TGTAGGAATCGCGCGTATTG+GGG | 0.542727 | 3_3:-74004030 | Msa0471620:intron |
| AGGTCAGGTGGCGGGCATCG+TGG | 0.543236 | 3_3:-74004192 | Msa0471620:CDS |
| TAGCACCAGGTGGAAGTGAA+TGG | 0.546132 | 3_3:+74005658 | None:intergenic |
| GGCTCATGCAGCAACTGCCA+TGG | 0.546144 | 3_3:-74005316 | Msa0471620:CDS |
| ATTACCATGCAATGCATCCA+TGG | 0.548719 | 3_3:+74005299 | None:intergenic |
| AATTGTAATTCTCGACTGAA+AGG | 0.553922 | 3_3:+74003977 | None:intergenic |
| CCTTCCTCTATCATCGTCGT+GGG | 0.554327 | 3_3:+74006412 | None:intergenic |
| AGTCTACTAGAACCATTGAT+GGG | 0.560461 | 3_3:-74005791 | Msa0471620:CDS |
| TACTTCGCGTCTTGTACAGT+TGG | 0.562365 | 3_3:+74005605 | None:intergenic |
| GCCTTCCTCTATCATCGTCG+TGG | 0.562600 | 3_3:+74006411 | None:intergenic |
| AAACGTCCCCGTACTGACTA+CGG | 0.563243 | 3_3:-74010033 | Msa0471620:intron |
| ACCAATACACTATTTGTGGA+GGG | 0.567944 | 3_3:-74005636 | Msa0471620:CDS |
| GGGGAGGTTGTGTTTGTGAG+AGG | 0.568048 | 3_3:-74004011 | Msa0471620:three_prime_UTR |
| GACCAAATCCTGGAATTAAG+TGG | 0.568245 | 3_3:-74005693 | Msa0471620:CDS |
| TGTTAGATGACTATTAATTG+TGG | 0.576198 | 3_3:-74003694 | Msa0471620:three_prime_UTR |
| AACGCTCATAGGATGCATCA+AGG | 0.578292 | 3_3:+74006363 | None:intergenic |
| CTTACCTCCCAGATATTCGC+AGG | 0.587821 | 3_3:+74003786 | None:intergenic |
| TCGCGTCTTGTACAGTTGGA+AGG | 0.592466 | 3_3:+74005609 | None:intergenic |
| CCTGACCATTCACTTCCACC+TGG | 0.598787 | 3_3:-74005663 | Msa0471620:CDS |
| TGTCAGCAAGGAATCAAGAC+AGG | 0.599053 | 3_3:-74005457 | Msa0471620:intron |
| TCCTGGAATTAAGTGGTGGA+AGG | 0.599053 | 3_3:-74005686 | Msa0471620:CDS |
| ATTCTCATGTCACAAGTATG+GGG | 0.599732 | 3_3:-74005743 | Msa0471620:CDS |
| TACCAATACACTATTTGTGG+AGG | 0.606235 | 3_3:-74005637 | Msa0471620:CDS |
| CCAATAAGCGTCAGACATGA+CGG | 0.612476 | 3_3:+74010101 | None:intergenic |
| AGAAGTTAGACTTGTCAGCA+AGG | 0.615035 | 3_3:-74005469 | Msa0471620:CDS |
| AGGAATCGCGCGTATTGGGG+AGG | 0.615754 | 3_3:-74004027 | Msa0471620:three_prime_UTR |
| TGGGATTATGTGCAGCCTGG+GGG | 0.617426 | 3_3:-74005378 | Msa0471620:intron |
| CAGTACGGGGACGTTTGCCG+GGG | 0.621369 | 3_3:+74010040 | None:intergenic |
| ACCGTAAATTGACCGAGTTG+CGG | 0.624559 | 3_3:+74004238 | None:intergenic |
| TGATGAGCTTGACCGCAACT+CGG | 0.625250 | 3_3:-74004250 | Msa0471620:CDS |
| CCCACGACGATGATAGAGGA+AGG | 0.628399 | 3_3:-74006412 | Msa0471620:CDS |
| AGTTAGATTGTGAATACGAA+TGG | 0.632662 | 3_3:+74010149 | None:intergenic |
| TTCTCATGTCACAAGTATGG+GGG | 0.635726 | 3_3:-74005742 | Msa0471620:CDS |
| GTCTACTAGAACCATTGATG+GGG | 0.636718 | 3_3:-74005790 | Msa0471620:CDS |
| TCAACAAAACAAAGTAACAG+TGG | 0.640494 | 3_3:+74005351 | None:intergenic |
| ACGCTCATAGGATGCATCAA+GGG | 0.644974 | 3_3:+74006364 | None:intergenic |
| AATAGTGTATTGGTAGCACC+AGG | 0.647665 | 3_3:+74005645 | None:intergenic |
| TGAGCGTTACCTCCGTAATG+CGG | 0.655465 | 3_3:-74006348 | Msa0471620:intron |
| AATTCGCTCGCAACCCTGGG+AGG | 0.657729 | 3_3:-74004212 | Msa0471620:CDS |
| CAAATCCTGGAATTAAGTGG+TGG | 0.659162 | 3_3:-74005690 | Msa0471620:CDS |
| GAATCATCAATAGAATGACT+GGG | 0.666778 | 3_3:+74005762 | None:intergenic |
| TCTCATGTCACAAGTATGGG+GGG | 0.667031 | 3_3:-74005741 | Msa0471620:CDS |
| ACTGCCATGGATGCATTGCA+TGG | 0.674544 | 3_3:-74005303 | Msa0471620:intron |
| AGTGTATTGGTAGCACCAGG+TGG | 0.684914 | 3_3:+74005648 | None:intergenic |
| CTTCCTCTATCATCGTCGTG+GGG | 0.700696 | 3_3:+74006413 | None:intergenic |
| TCTACTAGAACCATTGATGG+GGG | 0.713611 | 3_3:-74005789 | Msa0471620:CDS |
| TGTTCGTTCAAGTCTACACG+AGG | 0.716661 | 3_3:+74010174 | None:intergenic |
| TGCTCCTGCGAATATCTGGG+AGG | 0.720617 | 3_3:-74003790 | Msa0471620:three_prime_UTR |
| TAATTAATACCGCATTACGG+AGG | 0.728809 | 3_3:+74006339 | None:intergenic |
| TGAATACCGTAGTCAGTACG+GGG | 0.745232 | 3_3:+74010027 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTTTTTATAAATTAAA+AGG | - | chr3_3:74005579-74005598 | Msa0471620:intron | 0.0% |
| !!! | TTTTTTATTTTAAGGTTAAT+AGG | - | chr3_3:74004407-74004426 | Msa0471620:intron | 10.0% |
| !! | AAAAAAAAAAAATATTACAG+GGG | + | chr3_3:74004439-74004458 | None:intergenic | 10.0% |
| !! | AATTTCTTGAAAAAAAAATT+TGG | + | chr3_3:74004523-74004542 | None:intergenic | 10.0% |
| !!! | AATCAAAAAAATTATTTTAC+AGG | - | chr3_3:74004555-74004574 | Msa0471620:intron | 10.0% |
| !!! | ATCAAAAAAATTATTTTACA+GGG | - | chr3_3:74004556-74004575 | Msa0471620:intron | 10.0% |
| !!! | TTTTTTTTTCCTTTCAATTT+AGG | - | chr3_3:74003884-74003903 | Msa0471620:three_prime_UTR | 15.0% |
| !!! | TTTTTTTTCCTTTCAATTTA+GGG | - | chr3_3:74003885-74003904 | Msa0471620:three_prime_UTR | 15.0% |
| !! | ATTGTGCATTAATATAAATA+AGG | - | chr3_3:74004296-74004315 | Msa0471620:intron | 15.0% |
| !!! | TCAAAACAAATTTTTTTACA+GGG | + | chr3_3:74004473-74004492 | None:intergenic | 15.0% |
| !!! | ATCAAAACAAATTTTTTTAC+AGG | + | chr3_3:74004474-74004493 | None:intergenic | 15.0% |
| !!! | AAAAAAATTTGGTTTTTGTT+TGG | + | chr3_3:74004512-74004531 | None:intergenic | 15.0% |
| !!! | TTTTTTTTCAAGAAATTTAC+AGG | - | chr3_3:74004526-74004545 | Msa0471620:intron | 15.0% |
| !!! | TTTTTTTCAAGAAATTTACA+GGG | - | chr3_3:74004527-74004546 | Msa0471620:intron | 15.0% |
| !!! | TCAAAAAAATTATTTTACAG+GGG | - | chr3_3:74004557-74004576 | Msa0471620:intron | 15.0% |
| !! | AAATAAAATAAAGGGTTAAT+AGG | + | chr3_3:74004619-74004638 | None:intergenic | 15.0% |
| !! | TTGTTAAAACATATTACATA+TGG | - | chr3_3:74005394-74005413 | Msa0471620:intron | 15.0% |
| !! | TGTTAAAACATATTACATAT+GGG | - | chr3_3:74005395-74005414 | Msa0471620:intron | 15.0% |
| !! | ATTTATTCAATTGCATTATA+TGG | + | chr3_3:74005977-74005996 | None:intergenic | 15.0% |
| !! | AAAAAAATAAGATTTGATGT+GGG | - | chr3_3:74006175-74006194 | Msa0471620:intron | 15.0% |
| !! | AGTATTTGATTAATGTATTT+GGG | - | chr3_3:74006401-74006420 | Msa0471620:CDS | 15.0% |
| !!! | AATCTATTTTTTTTTGTTGA+GGG | - | chr3_3:74006720-74006739 | Msa0471620:intron | 15.0% |
| !! | GTAAGTTTGAAAAATAAATA+GGG | + | chr3_3:74007157-74007176 | None:intergenic | 15.0% |
| !! | TAAATTAACCTAAAACATAT+AGG | + | chr3_3:74008009-74008028 | None:intergenic | 15.0% |
| !! | GAAATGATATAAAGAAATTA+TGG | - | chr3_3:74008881-74008900 | Msa0471620:intron | 15.0% |
| !! | ATAATTTGGAAATATCAAAA+TGG | + | chr3_3:74009073-74009092 | None:intergenic | 15.0% |
| !!! | ATTTTGATATTTCCAAATTA+TGG | - | chr3_3:74009072-74009091 | Msa0471620:intron | 15.0% |
| !! | AATTAAAACTTCAATTTGAA+TGG | - | chr3_3:74009775-74009794 | Msa0471620:intron | 15.0% |
| !! | AAAGGAAAAAAAAAAGTGAA+GGG | + | chr3_3:74003878-74003897 | None:intergenic | 20.0% |
| !! | GAATGAAAAATGATAACTAT+GGG | + | chr3_3:74003920-74003939 | None:intergenic | 20.0% |
| !!! | CAAAACAAATTTTTTTACAG+GGG | + | chr3_3:74004472-74004491 | None:intergenic | 20.0% |
| !!! | TTTTTTCAAGAAATTTACAG+GGG | - | chr3_3:74004528-74004547 | Msa0471620:intron | 20.0% |
| !! | GCAGACAAAAATAAAATAAA+GGG | + | chr3_3:74004627-74004646 | None:intergenic | 20.0% |
| !! | AGCAGACAAAAATAAAATAA+AGG | + | chr3_3:74004628-74004647 | None:intergenic | 20.0% |
| !!! | TATTTTTGCTTTTGTTGTTT+CGG | + | chr3_3:74004791-74004810 | None:intergenic | 20.0% |
| !!! | TTTATATGAGTTGAAAGTTA+CGG | - | chr3_3:74005646-74005665 | Msa0471620:CDS | 20.0% |
| !! | AATAAGTAAAGGCTATTAAT+TGG | + | chr3_3:74005801-74005820 | None:intergenic | 20.0% |
| !!! | CGATTTTATTCAATAAGTAA+AGG | + | chr3_3:74005812-74005831 | None:intergenic | 20.0% |
| !!! | ATTGATAGTAATTAGTAAGT+AGG | - | chr3_3:74006064-74006083 | Msa0471620:intron | 20.0% |
| !! | GAAAAAAATAAGATTTGATG+TGG | - | chr3_3:74006174-74006193 | Msa0471620:intron | 20.0% |
| !! | GAGTATTTGATTAATGTATT+TGG | - | chr3_3:74006400-74006419 | Msa0471620:CDS | 20.0% |
| !!! | TAATTGTGAAACCATTTTTA+TGG | - | chr3_3:74006425-74006444 | Msa0471620:CDS | 20.0% |
| !! | AAATTTGATGCATATGATAA+TGG | - | chr3_3:74006490-74006509 | Msa0471620:intron | 20.0% |
| !! | GAGATTGAAAGTAATATAAT+TGG | - | chr3_3:74006591-74006610 | Msa0471620:intron | 20.0% |
| !! | AAAGTAATATAATTGGTATC+AGG | - | chr3_3:74006598-74006617 | Msa0471620:intron | 20.0% |
| !!! | CAATCTATTTTTTTTTGTTG+AGG | - | chr3_3:74006719-74006738 | Msa0471620:intron | 20.0% |
| !!! | ATCTATTTTTTTTTGTTGAG+GGG | - | chr3_3:74006721-74006740 | Msa0471620:intron | 20.0% |
| !! | TTTCAAAGGTGAAAAATAAT+AGG | + | chr3_3:74006796-74006815 | None:intergenic | 20.0% |
| !! | GGTAAGTTTGAAAAATAAAT+AGG | + | chr3_3:74007158-74007177 | None:intergenic | 20.0% |
| !! | CAGTTTCAAATTCAAAATTA+TGG | - | chr3_3:74007282-74007301 | Msa0471620:intron | 20.0% |
| !! | AAATAATTAATACCGCATTA+CGG | + | chr3_3:74007527-74007546 | None:intergenic | 20.0% |
| !! | TAAAATCTTCTTTCAAGAAA+GGG | + | chr3_3:74007804-74007823 | None:intergenic | 20.0% |
| !!! | AGAAGATTTTAGAAAAAATG+TGG | - | chr3_3:74007813-74007832 | Msa0471620:intron | 20.0% |
| !!! | GAAGATTTTAGAAAAAATGT+GGG | - | chr3_3:74007814-74007833 | Msa0471620:intron | 20.0% |
| !!! | TAAACAAACCTATATGTTTT+AGG | - | chr3_3:74007998-74008017 | Msa0471620:intron | 20.0% |
| !!! | TATTTTGAAAATTTATGGCA+AGG | - | chr3_3:74008924-74008943 | Msa0471620:intron | 20.0% |
| !! | GATAAGAAAATATATTCACA+CGG | + | chr3_3:74009029-74009048 | None:intergenic | 20.0% |
| !! | ATAGATACTTAAACTATAGT+AGG | - | chr3_3:74009244-74009263 | Msa0471620:intron | 20.0% |
| ! | AAAAAAGTGAAGGGTAAAAA+TGG | + | chr3_3:74003869-74003888 | None:intergenic | 25.0% |
| ! | GAAAGGAAAAAAAAAAGTGA+AGG | + | chr3_3:74003879-74003898 | None:intergenic | 25.0% |
| ! | CGAATGAAAAATGATAACTA+TGG | + | chr3_3:74003921-74003940 | None:intergenic | 25.0% |
| ! | ATGTTTAAGAATTCTTGATC+TGG | - | chr3_3:74004199-74004218 | Msa0471620:CDS | 25.0% |
| ! | TGTTTAAGAATTCTTGATCT+GGG | - | chr3_3:74004200-74004219 | Msa0471620:CDS | 25.0% |
| !!! | AGTGTTTACTTGTTTTAATC+TGG | - | chr3_3:74004249-74004268 | Msa0471620:CDS | 25.0% |
| !!! | TTTTTCAAGAAATTTACAGG+GGG | - | chr3_3:74004529-74004548 | Msa0471620:intron | 25.0% |
| ! | CTTATAAGAGTTGAAAGTTA+GGG | + | chr3_3:74004711-74004730 | None:intergenic | 25.0% |
| ! | TTTACAGAGAAAAAAAGACA+TGG | + | chr3_3:74004765-74004784 | None:intergenic | 25.0% |
| !!! | GGTTTTGTTTCATATTTTAG+TGG | + | chr3_3:74004966-74004985 | None:intergenic | 25.0% |
| !!! | GTGAAAATAGCTTGTTAAAA+GGG | - | chr3_3:74005357-74005376 | Msa0471620:CDS | 25.0% |
| !!! | TGAAAATAGCTTGTTAAAAG+GGG | - | chr3_3:74005358-74005377 | Msa0471620:CDS | 25.0% |
| ! | TGTTAAAAGGGGTTTATTTA+TGG | - | chr3_3:74005369-74005388 | Msa0471620:intron | 25.0% |
| ! | AAAACATATTACATATGGGT+TGG | - | chr3_3:74005399-74005418 | Msa0471620:intron | 25.0% |
| ! | ATTTCCACAACCAAAAAATA+AGG | + | chr3_3:74005707-74005726 | None:intergenic | 25.0% |
| ! | AAAATAGCTAGCACAATAAA+AGG | + | chr3_3:74005741-74005760 | None:intergenic | 25.0% |
| !!! | TTATTGTGCTAGCTATTTTT+TGG | - | chr3_3:74005742-74005761 | Msa0471620:CDS | 25.0% |
| !! | ATACCACCTTTTATAGAAAA+TGG | + | chr3_3:74006015-74006034 | None:intergenic | 25.0% |
| !! | ATTTTCTATAAAAGGTGGTA+TGG | - | chr3_3:74006014-74006033 | Msa0471620:intron | 25.0% |
| !!! | TATAGGAGTATCTTTTTTGA+GGG | + | chr3_3:74006315-74006334 | None:intergenic | 25.0% |
| !!! | ATATAGGAGTATCTTTTTTG+AGG | + | chr3_3:74006316-74006335 | None:intergenic | 25.0% |
| ! | ACTGTTCAAACTAGATATAT+AGG | + | chr3_3:74006332-74006351 | None:intergenic | 25.0% |
| ! | ATTGCAACATTAGAAAAGTT+GGG | + | chr3_3:74006567-74006586 | None:intergenic | 25.0% |
| !! | GTTTTTGCTAAACATTAACA+TGG | + | chr3_3:74006650-74006669 | None:intergenic | 25.0% |
| !! | TTTAGCAAAAACAAGCTTTT+AGG | - | chr3_3:74006658-74006677 | Msa0471620:intron | 25.0% |
| !! | TTAGCAAAAACAAGCTTTTA+GGG | - | chr3_3:74006659-74006678 | Msa0471620:intron | 25.0% |
| !! | CAGTTATCATAACTGATTTA+CGG | - | chr3_3:74006894-74006913 | Msa0471620:intron | 25.0% |
| ! | ATAAAGACATGAGAATTTGT+TGG | - | chr3_3:74006919-74006938 | Msa0471620:intron | 25.0% |
| ! | TAAATAGGGAAAAAACCATT+TGG | + | chr3_3:74007143-74007162 | None:intergenic | 25.0% |
| !!! | GTTTTGGAAAATCTTTCATT+TGG | - | chr3_3:74007220-74007239 | Msa0471620:intron | 25.0% |
| ! | TTCAAAATTATGGCATTGTT+AGG | - | chr3_3:74007292-74007311 | Msa0471620:intron | 25.0% |
| ! | AACAGATAATTGGTCATTTA+AGG | + | chr3_3:74007557-74007576 | None:intergenic | 25.0% |
| ! | AGAAAACAAGAACAGATAAT+TGG | + | chr3_3:74007567-74007586 | None:intergenic | 25.0% |
| ! | AGTATTCATATACATAGCAA+CGG | + | chr3_3:74007650-74007669 | None:intergenic | 25.0% |
| ! | CTAAAATCTTCTTTCAAGAA+AGG | + | chr3_3:74007805-74007824 | None:intergenic | 25.0% |
| ! | AATATCTATACAGTGTGTTA+AGG | + | chr3_3:74008348-74008367 | None:intergenic | 25.0% |
| !!! | TTTTGTTGATTTTGTAAGTC+CGG | - | chr3_3:74008523-74008542 | Msa0471620:intron | 25.0% |
| ! | CATTACAAGGATAAAAGAAA+AGG | + | chr3_3:74008591-74008610 | None:intergenic | 25.0% |
| !!! | TGCTGTAAAATATTTTTTCC+TGG | - | chr3_3:74008684-74008703 | Msa0471620:intron | 25.0% |
| ! | GATATAAAGAAATTATGGCA+AGG | - | chr3_3:74008886-74008905 | Msa0471620:intron | 25.0% |
| ! | TTTGGAAATATCAAAATGGA+TGG | + | chr3_3:74009069-74009088 | None:intergenic | 25.0% |
| ! | TTGATATTTCCAAATTATGG+AGG | - | chr3_3:74009075-74009094 | Msa0471620:intron | 25.0% |
| !! | TAATTAAGCCTTCTTTGTTT+CGG | - | chr3_3:74009157-74009176 | Msa0471620:intron | 25.0% |
| ! | TTAAAATAACTCGACATGAA+AGG | + | chr3_3:74009218-74009237 | None:intergenic | 25.0% |
| !!! | GTTTATTTTGTTTTAAGCTG+AGG | - | chr3_3:74009473-74009492 | Msa0471620:intron | 25.0% |
| ! | ATTTGTAACCTGCAAAATTA+AGG | + | chr3_3:74009589-74009608 | None:intergenic | 25.0% |
| ! | GTAAAACGAAAATTCTATGT+AGG | - | chr3_3:74009813-74009832 | Msa0471620:intron | 25.0% |
| ! | TAATAGTCATCTAACAACTT+AGG | + | chr3_3:74010162-74010181 | None:intergenic | 25.0% |
| ! | TGTTAGATGACTATTAATTG+TGG | - | chr3_3:74010166-74010185 | Msa0471620:five_prime_UTR | 25.0% |
| !!! | AAATTTGGTAAGTTGGTTTT+GGG | + | chr3_3:74010233-74010252 | None:intergenic | 25.0% |
| !!! | AAAATTTGGTAAGTTGGTTT+TGG | + | chr3_3:74010234-74010253 | None:intergenic | 25.0% |
| AGTTAGATTGTGAATACGAA+TGG | + | chr3_3:74003714-74003733 | None:intergenic | 30.0% | |
| AGTAGAAACCCTAAATTGAA+AGG | + | chr3_3:74003896-74003915 | None:intergenic | 30.0% | |
| !! | GTTATCATTTTTCATTCGCT+AGG | - | chr3_3:74003923-74003942 | Msa0471620:three_prime_UTR | 30.0% |
| ! | AATTTTCCCCATTTCAATCT+CGG | - | chr3_3:74003967-74003986 | Msa0471620:three_prime_UTR | 30.0% |
| AAACAGTGAAAATCACGAAT+GGG | + | chr3_3:74004028-74004047 | None:intergenic | 30.0% | |
| AAAACAGTGAAAATCACGAA+TGG | + | chr3_3:74004029-74004048 | None:intergenic | 30.0% | |
| CAATACAGATACCTATAACT+AGG | + | chr3_3:74004151-74004170 | None:intergenic | 30.0% | |
| TAGGTATCTGTATTGTATTC+TGG | - | chr3_3:74004156-74004175 | Msa0471620:intron | 30.0% | |
| ! | GACAATTGCATTTTCATTGT+AGG | + | chr3_3:74004345-74004364 | None:intergenic | 30.0% |
| ATGCAATTGTCAAACTAAGT+TGG | - | chr3_3:74004354-74004373 | Msa0471620:intron | 30.0% | |
| TGCAATTGTCAAACTAAGTT+GGG | - | chr3_3:74004355-74004374 | Msa0471620:intron | 30.0% | |
| !! | TTTTCAAGAAATTTACAGGG+GGG | - | chr3_3:74004530-74004549 | Msa0471620:intron | 30.0% |
| !! | ATTATTTTACAGGGGAAAAC+CGG | - | chr3_3:74004565-74004584 | Msa0471620:intron | 30.0% |
| TGCCTAATTATGTTTCGAAT+CGG | - | chr3_3:74004656-74004675 | Msa0471620:intron | 30.0% | |
| GCTTATAAGAGTTGAAAGTT+AGG | + | chr3_3:74004712-74004731 | None:intergenic | 30.0% | |
| AACTCTTATAAGCTATCACA+TGG | - | chr3_3:74004719-74004738 | Msa0471620:intron | 30.0% | |
| AAAAATACATGTTTCTCCCT+CGG | - | chr3_3:74004804-74004823 | Msa0471620:intron | 30.0% | |
| ATAATGCTCAAAGTTAATCG+TGG | + | chr3_3:74004869-74004888 | None:intergenic | 30.0% | |
| CAGTGCATAAAAATTTGGAT+TGG | + | chr3_3:74004927-74004946 | None:intergenic | 30.0% | |
| AGACACAGTGCATAAAAATT+TGG | + | chr3_3:74004932-74004951 | None:intergenic | 30.0% | |
| ATATGTGTTGTACAAGACAA+AGG | - | chr3_3:74005066-74005085 | Msa0471620:intron | 30.0% | |
| TTACATACTTCCATCCAAAA+AGG | + | chr3_3:74005250-74005269 | None:intergenic | 30.0% | |
| GAAGTATGTAATGCATATGT+TGG | - | chr3_3:74005259-74005278 | Msa0471620:intron | 30.0% | |
| !! | GGTGAAAATAGCTTGTTAAA+AGG | - | chr3_3:74005356-74005375 | Msa0471620:CDS | 30.0% |
| AATTAAAAGGTAAAGCCAGA+TGG | - | chr3_3:74005592-74005611 | Msa0471620:intron | 30.0% | |
| ACAACCAAAAAATAAGGATC+CGG | + | chr3_3:74005701-74005720 | None:intergenic | 30.0% | |
| AAGACAAAAACAAGATGACA+GGG | + | chr3_3:74005910-74005929 | None:intergenic | 30.0% | |
| AAAGACAAAAACAAGATGAC+AGG | + | chr3_3:74005911-74005930 | None:intergenic | 30.0% | |
| !!! | ACACTGCCATTTTCTATAAA+AGG | - | chr3_3:74006006-74006025 | Msa0471620:intron | 30.0% |
| AGTAAACTTTACATGAGTCA+TGG | - | chr3_3:74006142-74006161 | Msa0471620:intron | 30.0% | |
| !!! | CTTTTTTGAGGGAGATATAT+AGG | + | chr3_3:74006304-74006323 | None:intergenic | 30.0% |
| TTGACACAGATCCATAAAAA+TGG | + | chr3_3:74006439-74006458 | None:intergenic | 30.0% | |
| CAAATGATTAACTCTTCAAC+TGG | + | chr3_3:74006523-74006542 | None:intergenic | 30.0% | |
| GATTGCAACATTAGAAAAGT+TGG | + | chr3_3:74006568-74006587 | None:intergenic | 30.0% | |
| TTAACCTTGGAATTACTCTT+TGG | - | chr3_3:74006621-74006640 | Msa0471620:intron | 30.0% | |
| ! | ATTGCACTTTTGCAAAGTTA+GGG | + | chr3_3:74006703-74006722 | None:intergenic | 30.0% |
| ! | ATAGGCTTAAATGCACTTTT+GGG | + | chr3_3:74006778-74006797 | None:intergenic | 30.0% |
| ! | AATAGGCTTAAATGCACTTT+TGG | + | chr3_3:74006779-74006798 | None:intergenic | 30.0% |
| CGTAAATCAGTTATGATAAC+TGG | + | chr3_3:74006896-74006915 | None:intergenic | 30.0% | |
| TAAAACTAGAAATAGACTGC+AGG | - | chr3_3:74006945-74006964 | Msa0471620:intron | 30.0% | |
| AAAACTAGAAATAGACTGCA+GGG | - | chr3_3:74006946-74006965 | Msa0471620:intron | 30.0% | |
| ! | ATTTGGAGTCTTAGAATTTG+TGG | + | chr3_3:74007126-74007145 | None:intergenic | 30.0% |
| !! | ACAAATTCTAAGACTCCAAA+TGG | - | chr3_3:74007125-74007144 | Msa0471620:intron | 30.0% |
| ! | GAATTTGAAACTGTATGACT+TGG | + | chr3_3:74007275-74007294 | None:intergenic | 30.0% |
| !! | GCTTAATTTTGAAGATGTCT+CGG | - | chr3_3:74007398-74007417 | Msa0471620:intron | 30.0% |
| !! | CTTAATTTTGAAGATGTCTC+GGG | - | chr3_3:74007399-74007418 | Msa0471620:intron | 30.0% |
| ATTCGGTATCTCTAATTACT+TGG | + | chr3_3:74007476-74007495 | None:intergenic | 30.0% | |
| ATAATTGGTCATTTAAGGAC+AGG | + | chr3_3:74007552-74007571 | None:intergenic | 30.0% | |
| ! | TTGTTTTCTATAGCCCTATT+CGG | - | chr3_3:74007578-74007597 | Msa0471620:intron | 30.0% |
| AAAAATCAACATGCCGAATA+GGG | + | chr3_3:74007594-74007613 | None:intergenic | 30.0% | |
| AAAAAATCAACATGCCGAAT+AGG | + | chr3_3:74007595-74007614 | None:intergenic | 30.0% | |
| !!! | TTCGGCATGTTGATTTTTTT+AGG | - | chr3_3:74007596-74007615 | Msa0471620:intron | 30.0% |
| ATAATTTGAGCATGAGTCTA+AGG | + | chr3_3:74007708-74007727 | None:intergenic | 30.0% | |
| ATGGATGGAAATTCAGAAAA+AGG | + | chr3_3:74007889-74007908 | None:intergenic | 30.0% | |
| GAATCATCAATAGAATGACT+GGG | + | chr3_3:74008101-74008120 | None:intergenic | 30.0% | |
| AGAATCATCAATAGAATGAC+TGG | + | chr3_3:74008102-74008121 | None:intergenic | 30.0% | |
| ! | GGTCTTTTACATTTGTTCTT+CGG | + | chr3_3:74008151-74008170 | None:intergenic | 30.0% |
| AAATGTAAAAGACCAAATCC+TGG | - | chr3_3:74008157-74008176 | Msa0471620:intron | 30.0% | |
| !! | AATGAAAACCAATGGACTAA+GGG | + | chr3_3:74008304-74008323 | None:intergenic | 30.0% |
| ! | GATATTTTTCGTCCTTTTGT+TGG | - | chr3_3:74008362-74008381 | Msa0471620:intron | 30.0% |
| !!! | TGCATTGATTGATTTTTGAC+TGG | - | chr3_3:74008462-74008481 | Msa0471620:intron | 30.0% |
| !!! | GCATTGATTGATTTTTGACT+GGG | - | chr3_3:74008463-74008482 | Msa0471620:intron | 30.0% |
| TCAACAAAACAAAGTAACAG+TGG | + | chr3_3:74008512-74008531 | None:intergenic | 30.0% | |
| ! | GGTAATAACAGTGTGTATTT+TGG | - | chr3_3:74008726-74008745 | Msa0471620:intron | 30.0% |
| AAATTTATGGCAAGGATACT+AGG | - | chr3_3:74008932-74008951 | Msa0471620:intron | 30.0% | |
| TATATTCACACGGTTAAACA+CGG | + | chr3_3:74009019-74009038 | None:intergenic | 30.0% | |
| !! | TAAACTTTCTGGTTAAGAGA+AGG | + | chr3_3:74009373-74009392 | None:intergenic | 30.0% |
| !!! | TTTTGTTTTAAGCTGAGGTA+AGG | - | chr3_3:74009478-74009497 | Msa0471620:intron | 30.0% |
| ! | ACAATGAACCTTAATTTTGC+AGG | - | chr3_3:74009578-74009597 | Msa0471620:intron | 30.0% |
| ACTATTAATAACAGCGTGAA+CGG | + | chr3_3:74009743-74009762 | None:intergenic | 30.0% | |
| AATTGTAATTCTCGACTGAA+AGG | + | chr3_3:74009886-74009905 | None:intergenic | 30.0% | |
| GAATTACAATTGCTTTCGTT+AGG | - | chr3_3:74009895-74009914 | Msa0471620:intron | 30.0% | |
| ! | TTTCTCTGAATTGTCTTGTT+TGG | - | chr3_3:74010018-74010037 | Msa0471620:intron | 30.0% |
| ! | GGTATAAGTTTGTTTCTTGA+AGG | - | chr3_3:74010039-74010058 | Msa0471620:CDS | 30.0% |
| ! | GTTGTGTTTCTGTTGAGTTA+AGG | - | chr3_3:74003658-74003677 | Msa0471620:three_prime_UTR | 35.0% |
| ! | ATTTTCCCCATTTCAATCTC+GGG | - | chr3_3:74003968-74003987 | Msa0471620:three_prime_UTR | 35.0% |
| AGAAATCCCGAGATTGAAAT+GGG | + | chr3_3:74003977-74003996 | None:intergenic | 35.0% | |
| TAGAAATCCCGAGATTGAAA+TGG | + | chr3_3:74003978-74003997 | None:intergenic | 35.0% | |
| ! | GATTTTCACTGTTTTGTACG+AGG | - | chr3_3:74004034-74004053 | Msa0471620:intron | 35.0% |
| ! | TTTCCCTTTTGTACACGTAT+TGG | - | chr3_3:74004110-74004129 | Msa0471620:intron | 35.0% |
| ! | TTCCCTTTTGTACACGTATT+GGG | - | chr3_3:74004111-74004130 | Msa0471620:intron | 35.0% |
| TTCCCAATACGTGTACAAAA+GGG | + | chr3_3:74004116-74004135 | None:intergenic | 35.0% | |
| ATTCCCAATACGTGTACAAA+AGG | + | chr3_3:74004117-74004136 | None:intergenic | 35.0% | |
| CTCATGTTGTTCCTAGTTAT+AGG | - | chr3_3:74004137-74004156 | Msa0471620:intron | 35.0% | |
| !!! | GTTTTGATTTACCCCCTAAT+AGG | - | chr3_3:74004486-74004505 | Msa0471620:intron | 35.0% |
| !! | TTTTTGTTTGGCCTATTAGG+GGG | + | chr3_3:74004500-74004519 | None:intergenic | 35.0% |
| !! | GTTTTTGTTTGGCCTATTAG+GGG | + | chr3_3:74004501-74004520 | None:intergenic | 35.0% |
| !! | GGTTTTTGTTTGGCCTATTA+GGG | + | chr3_3:74004502-74004521 | None:intergenic | 35.0% |
| !! | TGGTTTTTGTTTGGCCTATT+AGG | + | chr3_3:74004503-74004522 | None:intergenic | 35.0% |
| CCTGTAATATAGGTCATTTC+CGG | + | chr3_3:74004587-74004606 | None:intergenic | 35.0% | |
| CGGAAATGACCTATATTACA+GGG | - | chr3_3:74004585-74004604 | Msa0471620:intron | 35.0% | |
| GGAAATGACCTATATTACAG+GGG | - | chr3_3:74004586-74004605 | Msa0471620:intron | 35.0% | |
| GAAATGACCTATATTACAGG+GGG | - | chr3_3:74004587-74004606 | Msa0471620:intron | 35.0% | |
| GCCTAATTATGTTTCGAATC+GGG | - | chr3_3:74004657-74004676 | Msa0471620:intron | 35.0% | |
| ! | TCCCGATTCGAAACATAATT+AGG | + | chr3_3:74004661-74004680 | None:intergenic | 35.0% |
| ACAAAGCTCGTGATCTTAAA+TGG | + | chr3_3:74004991-74005010 | None:intergenic | 35.0% | |
| ! | ATTTAAGATCACGAGCTTTG+TGG | - | chr3_3:74004990-74005009 | Msa0471620:intron | 35.0% |
| CAAAGTCATATGTTGTTCTG+TGG | + | chr3_3:74005094-74005113 | None:intergenic | 35.0% | |
| ATACACAAATTACAGACGAG+TGG | - | chr3_3:74005193-74005212 | Msa0471620:intron | 35.0% | |
| TTTACAAACAGCATCGCAAT+TGG | + | chr3_3:74005305-74005324 | None:intergenic | 35.0% | |
| !! | TATTACATATGGGTTGGTGA+CGG | - | chr3_3:74005405-74005424 | Msa0471620:intron | 35.0% |
| AGTCGATTATGGTTCTCTAA+TGG | - | chr3_3:74005482-74005501 | Msa0471620:CDS | 35.0% | |
| AGGAAGAATATGGAGTTTGT+GGG | - | chr3_3:74005519-74005538 | Msa0471620:intron | 35.0% | |
| TATGAAGCATAAGATCGATC+TGG | - | chr3_3:74005620-74005639 | Msa0471620:CDS | 35.0% | |
| GTTGAAAGTTACGGTATCTT+CGG | - | chr3_3:74005655-74005674 | Msa0471620:CDS | 35.0% | |
| !!! | GAATCCGGATCCTTATTTTT+TGG | - | chr3_3:74005694-74005713 | Msa0471620:CDS | 35.0% |
| !!! | GGATCCTTATTTTTTGGTTG+TGG | - | chr3_3:74005700-74005719 | Msa0471620:CDS | 35.0% |
| !!! | CTGCCATTTTCTATAAAAGG+TGG | - | chr3_3:74006009-74006028 | Msa0471620:intron | 35.0% |
| !! | GTGGTGGACTTATATTTCTT+TGG | - | chr3_3:74006119-74006138 | Msa0471620:intron | 35.0% |
| ATTTGATGTGGGCAATCTAT+TGG | - | chr3_3:74006186-74006205 | Msa0471620:intron | 35.0% | |
| AATTGGTATCAGGTTAACCT+TGG | - | chr3_3:74006608-74006627 | Msa0471620:intron | 35.0% | |
| GTTACCAAAGAGTAATTCCA+AGG | + | chr3_3:74006628-74006647 | None:intergenic | 35.0% | |
| ! | GATTGCACTTTTGCAAAGTT+AGG | + | chr3_3:74006704-74006723 | None:intergenic | 35.0% |
| ! | ATCGCATCTTTTGCAAAGTT+AGG | - | chr3_3:74006749-74006768 | Msa0471620:intron | 35.0% |
| ! | TCGCATCTTTTGCAAAGTTA+GGG | - | chr3_3:74006750-74006769 | Msa0471620:intron | 35.0% |
| ! | ACGTTGGACAATGTTTTCAA+AGG | + | chr3_3:74006810-74006829 | None:intergenic | 35.0% |
| ACTCTTACCAAATCAACAGA+GGG | + | chr3_3:74006990-74007009 | None:intergenic | 35.0% | |
| AACTCTTACCAAATCAACAG+AGG | + | chr3_3:74006991-74007010 | None:intergenic | 35.0% | |
| TATGTTAAAGAGTCCCACAT+TGG | - | chr3_3:74007016-74007035 | Msa0471620:intron | 35.0% | |
| GGTCATTTCTTATCCAATGT+GGG | + | chr3_3:74007032-74007051 | None:intergenic | 35.0% | |
| CACATTGGATAAGAAATGAC+CGG | - | chr3_3:74007031-74007050 | Msa0471620:intron | 35.0% | |
| ACCGGAACATGTGTTTATAA+AGG | - | chr3_3:74007049-74007068 | Msa0471620:intron | 35.0% | |
| CCCTTTATAAACACATGTTC+CGG | + | chr3_3:74007053-74007072 | None:intergenic | 35.0% | |
| CCGGAACATGTGTTTATAAA+GGG | - | chr3_3:74007050-74007069 | Msa0471620:intron | 35.0% | |
| CGGAACATGTGTTTATAAAG+GGG | - | chr3_3:74007051-74007070 | Msa0471620:intron | 35.0% | |
| GGAACATGTGTTTATAAAGG+GGG | - | chr3_3:74007052-74007071 | Msa0471620:intron | 35.0% | |
| GAACATGTGTTTATAAAGGG+GGG | - | chr3_3:74007053-74007072 | Msa0471620:intron | 35.0% | |
| GAGTCTTAGAATTTGTGGTT+GGG | + | chr3_3:74007121-74007140 | None:intergenic | 35.0% | |
| CTGCTTAAGGATGTATATGA+GGG | + | chr3_3:74007179-74007198 | None:intergenic | 35.0% | |
| ACTGCTTAAGGATGTATATG+AGG | + | chr3_3:74007180-74007199 | None:intergenic | 35.0% | |
| AGAAGAGAAAGACTGAAGAA+AGG | + | chr3_3:74007362-74007381 | None:intergenic | 35.0% | |
| TAATTAATACCGCATTACGG+AGG | + | chr3_3:74007524-74007543 | None:intergenic | 35.0% | |
| !! | TTAGCTCTAAAGTTCTCTCT+CGG | - | chr3_3:74007745-74007764 | Msa0471620:intron | 35.0% |
| GCACGCACAATGTAATAAAT+AGG | + | chr3_3:74007850-74007869 | None:intergenic | 35.0% | |
| GATGGAATAACTTATGCAAC+TGG | - | chr3_3:74007924-74007943 | Msa0471620:intron | 35.0% | |
| AATAACTTATGCAACTGGAC+TGG | - | chr3_3:74007929-74007948 | Msa0471620:intron | 35.0% | |
| TTTACATGCCATATTCGTCA+TGG | + | chr3_3:74007982-74008001 | None:intergenic | 35.0% | |
| AGTCTACTAGAACCATTGAT+GGG | - | chr3_3:74008069-74008088 | Msa0471620:intron | 35.0% | |
| TGATTCTCATGTCACAAGTA+TGG | - | chr3_3:74008115-74008134 | Msa0471620:intron | 35.0% | |
| GATTCTCATGTCACAAGTAT+GGG | - | chr3_3:74008116-74008135 | Msa0471620:intron | 35.0% | |
| ATTCTCATGTCACAAGTATG+GGG | - | chr3_3:74008117-74008136 | Msa0471620:intron | 35.0% | |
| TGCTACCAATACACTATTTG+TGG | - | chr3_3:74008220-74008239 | Msa0471620:intron | 35.0% | |
| TACCAATACACTATTTGTGG+AGG | - | chr3_3:74008223-74008242 | Msa0471620:intron | 35.0% | |
| ACCAATACACTATTTGTGGA+GGG | - | chr3_3:74008224-74008243 | Msa0471620:intron | 35.0% | |
| !! | CAATGAAAACCAATGGACTA+AGG | + | chr3_3:74008305-74008324 | None:intergenic | 35.0% |
| GAATCGACAATGAAAACCAA+TGG | + | chr3_3:74008312-74008331 | None:intergenic | 35.0% | |
| ACTTCTTTGTAGCCAACAAA+AGG | + | chr3_3:74008377-74008396 | None:intergenic | 35.0% | |
| TGTATGAGGTTGTCATTACA+AGG | + | chr3_3:74008604-74008623 | None:intergenic | 35.0% | |
| ! | CAACCTCATACATTTTTCCA+AGG | - | chr3_3:74008612-74008631 | Msa0471620:intron | 35.0% |
| CACTAAAATCAGCTCATGAA+GGG | + | chr3_3:74008660-74008679 | None:intergenic | 35.0% | |
| TCACTAAAATCAGCTCATGA+AGG | + | chr3_3:74008661-74008680 | None:intergenic | 35.0% | |
| ACTGATAAGCGATGCATAAT+TGG | - | chr3_3:74008811-74008830 | Msa0471620:intron | 35.0% | |
| AATGGATGGCATTCATGATT+GGG | + | chr3_3:74009055-74009074 | None:intergenic | 35.0% | |
| AAATGGATGGCATTCATGAT+TGG | + | chr3_3:74009056-74009075 | None:intergenic | 35.0% | |
| ! | TGTTTGCTGCACAAAATATG+TGG | - | chr3_3:74009124-74009143 | Msa0471620:intron | 35.0% |
| CAAAGAAGGCTTAATTAGTC+AGG | + | chr3_3:74009154-74009173 | None:intergenic | 35.0% | |
| ACGAAAGGGATTAAACTTTC+TGG | + | chr3_3:74009384-74009403 | None:intergenic | 35.0% | |
| TACCTTCACTTAGTACGAAA+GGG | + | chr3_3:74009398-74009417 | None:intergenic | 35.0% | |
| ATACCTTCACTTAGTACGAA+AGG | + | chr3_3:74009399-74009418 | None:intergenic | 35.0% | |
| ! | TATCACATTTTCCCCTATGT+TGG | - | chr3_3:74009416-74009435 | Msa0471620:intron | 35.0% |
| ! | TTTTCCCCTATGTTGGATAT+TGG | - | chr3_3:74009423-74009442 | Msa0471620:intron | 35.0% |
| TTTCCCCTATGTTGGATATT+GGG | - | chr3_3:74009424-74009443 | Msa0471620:intron | 35.0% | |
| AAACCCAATATCCAACATAG+GGG | + | chr3_3:74009430-74009449 | None:intergenic | 35.0% | |
| CAAACCCAATATCCAACATA+GGG | + | chr3_3:74009431-74009450 | None:intergenic | 35.0% | |
| TCAAACCCAATATCCAACAT+AGG | + | chr3_3:74009432-74009451 | None:intergenic | 35.0% | |
| GATGAAAAACTAACCACATC+TGG | + | chr3_3:74009553-74009572 | None:intergenic | 35.0% | |
| CGTTGAATTATGCATTCTAC+AGG | - | chr3_3:74009695-74009714 | Msa0471620:intron | 35.0% | |
| ACGCTGTTATTAATAGTCTG+TGG | - | chr3_3:74009746-74009765 | Msa0471620:intron | 35.0% | |
| CGCTGTTATTAATAGTCTGT+GGG | - | chr3_3:74009747-74009766 | Msa0471620:intron | 35.0% | |
| CCTAGCAAACGAATTTCAAA+AGG | + | chr3_3:74009932-74009951 | None:intergenic | 35.0% | |
| !!! | CCTTTTGAAATTCGTTTGCT+AGG | - | chr3_3:74009929-74009948 | Msa0471620:intron | 35.0% |
| ATGCTCACTACAAACATGTA+TGG | + | chr3_3:74010111-74010130 | None:intergenic | 35.0% | |
| ACTGAATACCGTAGTCAGTA+CGG | + | chr3_3:74003838-74003857 | None:intergenic | 40.0% | |
| GAAATCCCGAGATTGAAATG+GGG | + | chr3_3:74003976-74003995 | None:intergenic | 40.0% | |
| CCGGAAATGACCTATATTAC+AGG | - | chr3_3:74004584-74004603 | Msa0471620:intron | 40.0% | |
| GTCTTTACCCCCTGTAATAT+AGG | + | chr3_3:74004597-74004616 | None:intergenic | 40.0% | |
| GTTGAAAGTTAGGGCAACTT+TGG | + | chr3_3:74004702-74004721 | None:intergenic | 40.0% | |
| CATGGATCTTATGCTTCACA+CGG | - | chr3_3:74004737-74004756 | Msa0471620:intron | 40.0% | |
| !!! | TGGAGGTTTGGTTTTACCTA+GGG | + | chr3_3:74004849-74004868 | None:intergenic | 40.0% |
| CAAAGTTAATCGTGGAGGTT+TGG | + | chr3_3:74004861-74004880 | None:intergenic | 40.0% | |
| ATGCTCAAAGTTAATCGTGG+AGG | + | chr3_3:74004866-74004885 | None:intergenic | 40.0% | |
| AGCTCGTGATCTTAAATGGT+TGG | + | chr3_3:74004987-74005006 | None:intergenic | 40.0% | |
| ACAAATTACAGACGAGTGGA+AGG | - | chr3_3:74005197-74005216 | Msa0471620:intron | 40.0% | |
| TTCCATCCAAAAAGGCTTAG+CGG | + | chr3_3:74005242-74005261 | None:intergenic | 40.0% | |
| TGACGCTGAAGAGATTAACA+TGG | - | chr3_3:74005332-74005351 | Msa0471620:CDS | 40.0% | |
| ! | TAAGAGAGGTGTGGTTATAG+TGG | - | chr3_3:74005452-74005471 | Msa0471620:intron | 40.0% |
| GTTCTCTAATGGCTGTTGTA+TGG | - | chr3_3:74005493-74005512 | Msa0471620:CDS | 40.0% | |
| ! | TGTATGGTGGAGGAAGAATA+TGG | - | chr3_3:74005509-74005528 | Msa0471620:intron | 40.0% |
| GAGGAAGAATATGGAGTTTG+TGG | - | chr3_3:74005518-74005537 | Msa0471620:intron | 40.0% | |
| GCCACAAAGTTAAGAGAATC+CGG | - | chr3_3:74005679-74005698 | Msa0471620:CDS | 40.0% | |
| TCCGGATTCTCTTAACTTTG+TGG | + | chr3_3:74005683-74005702 | None:intergenic | 40.0% | |
| TTCTGCTCTATCTTAAGCAG+TGG | - | chr3_3:74006100-74006119 | Msa0471620:intron | 40.0% | |
| ! | CGCATCTTTTGCAAAGTTAG+GGG | - | chr3_3:74006751-74006770 | Msa0471620:intron | 40.0% |
| ! | GCATCTTTTGCAAAGTTAGG+GGG | - | chr3_3:74006752-74006771 | Msa0471620:intron | 40.0% |
| ATGTGATGAATGATTCCTGG+TGG | + | chr3_3:74006837-74006856 | None:intergenic | 40.0% | |
| GAGATGTGATGAATGATTCC+TGG | + | chr3_3:74006840-74006859 | None:intergenic | 40.0% | |
| CTCTTACCAAATCAACAGAG+GGG | + | chr3_3:74006989-74007008 | None:intergenic | 40.0% | |
| CGGTCATTTCTTATCCAATG+TGG | + | chr3_3:74007033-74007052 | None:intergenic | 40.0% | |
| !!! | ATCTCACAAGCTGGTTTTGT+GGG | - | chr3_3:74007084-74007103 | Msa0471620:intron | 40.0% |
| GGAGTCTTAGAATTTGTGGT+TGG | + | chr3_3:74007122-74007141 | None:intergenic | 40.0% | |
| GATCTAGGCTTAACTGCTTA+AGG | + | chr3_3:74007192-74007211 | None:intergenic | 40.0% | |
| CCAAAACGTTAGACAGATCT+AGG | + | chr3_3:74007207-74007226 | None:intergenic | 40.0% | |
| ! | CCTAGATCTGTCTAACGTTT+TGG | - | chr3_3:74007204-74007223 | Msa0471620:intron | 40.0% |
| ATAGGATGCATCAAGGGATT+CGG | + | chr3_3:74007493-74007512 | None:intergenic | 40.0% | |
| ACTGGACACCTGTTTAATCT+AGG | - | chr3_3:74007947-74007966 | Msa0471620:intron | 40.0% | |
| GTGACGAACCTAGATTAAAC+AGG | + | chr3_3:74007958-74007977 | None:intergenic | 40.0% | |
| TTGCTGCAGATTTCATCTCA+TGG | - | chr3_3:74008038-74008057 | Msa0471620:intron | 40.0% | |
| GCAGATTTCATCTCATGGTT+CGG | - | chr3_3:74008043-74008062 | Msa0471620:intron | 40.0% | |
| CAGATTTCATCTCATGGTTC+GGG | - | chr3_3:74008044-74008063 | Msa0471620:intron | 40.0% | |
| CAGTCTACTAGAACCATTGA+TGG | - | chr3_3:74008068-74008087 | Msa0471620:intron | 40.0% | |
| GTCTACTAGAACCATTGATG+GGG | - | chr3_3:74008070-74008089 | Msa0471620:intron | 40.0% | |
| TCTACTAGAACCATTGATGG+GGG | - | chr3_3:74008071-74008090 | Msa0471620:intron | 40.0% | |
| TTCTCATGTCACAAGTATGG+GGG | - | chr3_3:74008118-74008137 | Msa0471620:intron | 40.0% | |
| GACCAAATCCTGGAATTAAG+TGG | - | chr3_3:74008167-74008186 | Msa0471620:intron | 40.0% | |
| CACCACTTAATTCCAGGATT+TGG | + | chr3_3:74008172-74008191 | None:intergenic | 40.0% | |
| CAAATCCTGGAATTAAGTGG+TGG | - | chr3_3:74008170-74008189 | Msa0471620:intron | 40.0% | |
| ! | AATAGTGTATTGGTAGCACC+AGG | + | chr3_3:74008218-74008237 | None:intergenic | 40.0% |
| ACCCTCCACAAATAGTGTAT+TGG | + | chr3_3:74008228-74008247 | None:intergenic | 40.0% | |
| GTAACCAGATGAAAGGATAC+GGG | + | chr3_3:74008282-74008301 | None:intergenic | 40.0% | |
| GGTAACCAGATGAAAGGATA+CGG | + | chr3_3:74008283-74008302 | None:intergenic | 40.0% | |
| ACTAAGGGTAACCAGATGAA+AGG | + | chr3_3:74008289-74008308 | None:intergenic | 40.0% | |
| !! | TTGTCGATTCCTCTTTCTCA+AGG | - | chr3_3:74008322-74008341 | Msa0471620:intron | 40.0% |
| AGAAGTTAGACTTGTCAGCA+AGG | - | chr3_3:74008391-74008410 | Msa0471620:intron | 40.0% | |
| ATTACCATGCAATGCATCCA+TGG | + | chr3_3:74008564-74008583 | None:intergenic | 40.0% | |
| CTGCCTTGGAAAAATGTATG+AGG | + | chr3_3:74008618-74008637 | None:intergenic | 40.0% | |
| AGAAATTGAACACACTGCCT+TGG | + | chr3_3:74008632-74008651 | None:intergenic | 40.0% | |
| TATGATCAACCTTCCTCTCA+TGG | - | chr3_3:74008754-74008773 | Msa0471620:intron | 40.0% | |
| GATAAAACTGACTGTCTGAC+TGG | - | chr3_3:74008845-74008864 | Msa0471620:intron | 40.0% | |
| ATTTCCAAATTATGGAGGCC+TGG | - | chr3_3:74009080-74009099 | Msa0471620:intron | 40.0% | |
| GTGATAGTCCGAAACAAAGA+AGG | + | chr3_3:74009168-74009187 | None:intergenic | 40.0% | |
| !! | ACTGTCTGCTTTTGGGTATT+TGG | + | chr3_3:74009298-74009317 | None:intergenic | 40.0% |
| !! | TTGTTGGACTGTCTGCTTTT+GGG | + | chr3_3:74009305-74009324 | None:intergenic | 40.0% |
| ! | ATTGTTGGACTGTCTGCTTT+TGG | + | chr3_3:74009306-74009325 | None:intergenic | 40.0% |
| AAAAGCAGACAGTCCAACAA+TGG | - | chr3_3:74009305-74009324 | Msa0471620:intron | 40.0% | |
| AAAGCAGACAGTCCAACAAT+GGG | - | chr3_3:74009306-74009325 | Msa0471620:intron | 40.0% | |
| ! | TTCTGGTTAAGAGAAGGAAG+AGG | + | chr3_3:74009367-74009386 | None:intergenic | 40.0% |
| ATCCCTTTCGTACTAAGTGA+AGG | - | chr3_3:74009393-74009412 | Msa0471620:intron | 40.0% | |
| AACGTTAGCAGACGTATTTC+AGG | - | chr3_3:74009451-74009470 | Msa0471620:intron | 40.0% | |
| TGTTCGTTCAAGTCTACACG+AGG | + | chr3_3:74003689-74003708 | None:intergenic | 45.0% | |
| CCAATAAGCGTCAGACATGA+CGG | + | chr3_3:74003762-74003781 | None:intergenic | 45.0% | |
| TGAATACCGTAGTCAGTACG+GGG | + | chr3_3:74003836-74003855 | None:intergenic | 45.0% | |
| CTGAATACCGTAGTCAGTAC+GGG | + | chr3_3:74003837-74003856 | None:intergenic | 45.0% | |
| TCACGAATGGGAAAGCTCAA+TGG | + | chr3_3:74004016-74004035 | None:intergenic | 45.0% | |
| ATCGGGATTCACTAACTTCG+TGG | - | chr3_3:74004674-74004693 | Msa0471620:intron | 45.0% | |
| !!! | TTTGGTTTTACCTAGGGCAG+TGG | + | chr3_3:74004843-74004862 | None:intergenic | 45.0% |
| !!! | GTGGAGGTTTGGTTTTACCT+AGG | + | chr3_3:74004850-74004869 | None:intergenic | 45.0% |
| CGCTGAAGAGATTAACATGG+CGG | - | chr3_3:74005335-74005354 | Msa0471620:CDS | 45.0% | |
| CTCTAATGGCTGTTGTATGG+TGG | - | chr3_3:74005496-74005515 | Msa0471620:CDS | 45.0% | |
| TAATGGCTGTTGTATGGTGG+AGG | - | chr3_3:74005499-74005518 | Msa0471620:CDS | 45.0% | |
| ATGCTTCATACTGTGCCATC+TGG | + | chr3_3:74005610-74005629 | None:intergenic | 45.0% | |
| GAAGCATAAGATCGATCTGG+CGG | - | chr3_3:74005623-74005642 | Msa0471620:CDS | 45.0% | |
| CAGGGCATGTTGTTGAATTG+AGG | + | chr3_3:74005892-74005911 | None:intergenic | 45.0% | |
| TGCTCTATCTTAAGCAGTGG+TGG | - | chr3_3:74006103-74006122 | Msa0471620:intron | 45.0% | |
| CAAAACCAGCTTGTGAGATG+AGG | + | chr3_3:74007083-74007102 | None:intergenic | 45.0% | |
| !!! | CATCTCACAAGCTGGTTTTG+TGG | - | chr3_3:74007083-74007102 | Msa0471620:intron | 45.0% |
| !!! | TCTCACAAGCTGGTTTTGTG+GGG | - | chr3_3:74007085-74007104 | Msa0471620:intron | 45.0% |
| !!! | TGGTTTTGTGGGGTTGTGTT+AGG | - | chr3_3:74007095-74007114 | Msa0471620:intron | 45.0% |
| ACGCTCATAGGATGCATCAA+GGG | + | chr3_3:74007499-74007518 | None:intergenic | 45.0% | |
| AACGCTCATAGGATGCATCA+AGG | + | chr3_3:74007500-74007519 | None:intergenic | 45.0% | |
| ATTACGGAGGTAACGCTCAT+AGG | + | chr3_3:74007511-74007530 | None:intergenic | 45.0% | |
| TTCTCTCTCGGAGATTTCGA+GGG | - | chr3_3:74007757-74007776 | Msa0471620:intron | 45.0% | |
| ACATGCTCAGAGTGAATGGA+TGG | + | chr3_3:74007904-74007923 | None:intergenic | 45.0% | |
| CATCACATGCTCAGAGTGAA+TGG | + | chr3_3:74007908-74007927 | None:intergenic | 45.0% | |
| CATTCACTCTGAGCATGTGA+TGG | - | chr3_3:74007906-74007925 | Msa0471620:intron | 45.0% | |
| TCGTCACACCATGACGAATA+TGG | - | chr3_3:74007971-74007990 | Msa0471620:intron | 45.0% | |
| TCTCATGTCACAAGTATGGG+GGG | - | chr3_3:74008119-74008138 | Msa0471620:intron | 45.0% | |
| ! | TCCTGGAATTAAGTGGTGGA+AGG | - | chr3_3:74008174-74008193 | Msa0471620:intron | 45.0% |
| TACTTCGCGTCTTGTACAGT+TGG | + | chr3_3:74008258-74008277 | None:intergenic | 45.0% | |
| TCTGGTTACCCTTAGTCCAT+TGG | - | chr3_3:74008293-74008312 | Msa0471620:intron | 45.0% | |
| GTGTTAAGGCCTTGAGAAAG+AGG | + | chr3_3:74008334-74008353 | None:intergenic | 45.0% | |
| TGTCAGCAAGGAATCAAGAC+AGG | - | chr3_3:74008403-74008422 | Msa0471620:intron | 45.0% | |
| GTTATTACCAACTCCACGAC+AGG | + | chr3_3:74008715-74008734 | None:intergenic | 45.0% | |
| GCAAGCATCCAGATAAGAGT+GGG | - | chr3_3:74008954-74008973 | Msa0471620:intron | 45.0% | |
| CAAGCATCCAGATAAGAGTG+GGG | - | chr3_3:74008955-74008974 | Msa0471620:intron | 45.0% | |
| TAGTACTCCCCACTCTTATC+TGG | + | chr3_3:74008965-74008984 | None:intergenic | 45.0% | |
| !! | AGATAAGAGTGGGGAGTACT+AGG | - | chr3_3:74008964-74008983 | Msa0471620:intron | 45.0% |
| CAAACCAGGCCTCCATAATT+TGG | + | chr3_3:74009087-74009106 | None:intergenic | 45.0% | |
| GCAGATGAATAGCTCAAACC+AGG | + | chr3_3:74009101-74009120 | None:intergenic | 45.0% | |
| CTGATCACGCTGCTAATAGT+TGG | + | chr3_3:74009195-74009214 | None:intergenic | 45.0% | |
| AAGCAGACAGTCCAACAATG+GGG | - | chr3_3:74009307-74009326 | Msa0471620:intron | 45.0% | |
| ACCGCAACTCGGTCAATTTA+CGG | - | chr3_3:74009621-74009640 | Msa0471620:intron | 45.0% | |
| ACCGTAAATTGACCGAGTTG+CGG | + | chr3_3:74009625-74009644 | None:intergenic | 45.0% | |
| TATGTAGGAATCGCGCGTAT+TGG | - | chr3_3:74009828-74009847 | Msa0471620:intron | 45.0% | |
| ATGTAGGAATCGCGCGTATT+GGG | - | chr3_3:74009829-74009848 | Msa0471620:intron | 45.0% | |
| GTAATTCTCGACTGAAAGGC+TGG | + | chr3_3:74009882-74009901 | None:intergenic | 45.0% | |
| TTACTGCTCCTGCGAATATC+TGG | - | chr3_3:74010066-74010085 | Msa0471620:CDS | 45.0% | |
| TACTGCTCCTGCGAATATCT+GGG | - | chr3_3:74010067-74010086 | Msa0471620:CDS | 45.0% | |
| !!! | TATTAGTATTTTTTATTTTA+AGG | - | chr3_3:74004399-74004418 | Msa0471620:intron | 5.0% |
| !! | AAAAAAAAAAAAATATTACA+GGG | + | chr3_3:74004440-74004459 | None:intergenic | 5.0% |
| !! | AAAAAAAAAAAAAATATTAC+AGG | + | chr3_3:74004441-74004460 | None:intergenic | 5.0% |
| !!! | ATATATATTTTGAAAATTTA+TGG | - | chr3_3:74008919-74008938 | Msa0471620:intron | 5.0% |
| CCGTCATGTCTGACGCTTAT+TGG | - | chr3_3:74003759-74003778 | Msa0471620:three_prime_UTR | 50.0% | |
| !! | AAACGTCCCCGTACTGACTA+CGG | - | chr3_3:74003827-74003846 | Msa0471620:three_prime_UTR | 50.0% |
| ! | GATTGGTCGAGTCAAGACAG+CGG | + | chr3_3:74004910-74004929 | None:intergenic | 50.0% |
| ! | TATGCGCCGCTAAGCCTTTT+TGG | - | chr3_3:74005233-74005252 | Msa0471620:intron | 50.0% |
| !! | TACATATGGGTTGGTGACGG+TGG | - | chr3_3:74005408-74005427 | Msa0471620:intron | 50.0% |
| GGCATGTAAGTCGGTAAGAG+AGG | - | chr3_3:74005438-74005457 | Msa0471620:intron | 50.0% | |
| GTAAGTCGGTAAGAGAGGTG+TGG | - | chr3_3:74005443-74005462 | Msa0471620:intron | 50.0% | |
| ! | GAGAGGTGTGGTTATAGTGG+TGG | - | chr3_3:74005455-74005474 | Msa0471620:intron | 50.0% |
| GGTGTGGTTATAGTGGTGGT+CGG | - | chr3_3:74005459-74005478 | Msa0471620:CDS | 50.0% | |
| GTTGGGAATCAGCTTGTGAC+TGG | + | chr3_3:74006550-74006569 | None:intergenic | 50.0% | |
| TTGTCCAACGTTATGCCACC+AGG | - | chr3_3:74006819-74006838 | Msa0471620:intron | 50.0% | |
| GATTCCTGGTGGCATAACGT+TGG | + | chr3_3:74006826-74006845 | None:intergenic | 50.0% | |
| ! | TTGACGCCCCTCTGTTGATT+TGG | - | chr3_3:74006980-74006999 | Msa0471620:intron | 50.0% |
| GCAATCCTCATCTCACAAGC+TGG | - | chr3_3:74007075-74007094 | Msa0471620:intron | 50.0% | |
| TGTCTCGGGCGTTCATAACT+TGG | - | chr3_3:74007413-74007432 | Msa0471620:intron | 50.0% | |
| TTTCCCCACGACGATGATAG+AGG | - | chr3_3:74007444-74007463 | Msa0471620:intron | 50.0% | |
| CTTCCTCTATCATCGTCGTG+GGG | + | chr3_3:74007450-74007469 | None:intergenic | 50.0% | |
| CCTTCCTCTATCATCGTCGT+GGG | + | chr3_3:74007451-74007470 | None:intergenic | 50.0% | |
| TGAGCGTTACCTCCGTAATG+CGG | - | chr3_3:74007512-74007531 | Msa0471620:intron | 50.0% | |
| GTTCTCTCTCGGAGATTTCG+AGG | - | chr3_3:74007756-74007775 | Msa0471620:intron | 50.0% | |
| GCCTTCCACCACTTAATTCC+AGG | + | chr3_3:74008178-74008197 | None:intergenic | 50.0% | |
| TAGCACCAGGTGGAAGTGAA+TGG | + | chr3_3:74008205-74008224 | None:intergenic | 50.0% | |
| ! | AGTGTATTGGTAGCACCAGG+TGG | + | chr3_3:74008215-74008234 | None:intergenic | 50.0% |
| TCGCGTCTTGTACAGTTGGA+AGG | + | chr3_3:74008254-74008273 | None:intergenic | 50.0% | |
| GTAGCCCGTATCCTTTCATC+TGG | - | chr3_3:74008275-74008294 | Msa0471620:intron | 50.0% | |
| ACTGGGATTATGTGCAGCCT+GGG | - | chr3_3:74008480-74008499 | Msa0471620:intron | 50.0% | |
| ACTGCCATGGATGCATTGCA+TGG | - | chr3_3:74008557-74008576 | Msa0471620:intron | 50.0% | |
| TTTCCTGGTATGTCCTGTCG+TGG | - | chr3_3:74008699-74008718 | Msa0471620:intron | 50.0% | |
| TCTTGATGCAGTGCCATGAG+AGG | + | chr3_3:74008770-74008789 | None:intergenic | 50.0% | |
| ! | TCTGACTGGAGAGTGTACAG+TGG | - | chr3_3:74008859-74008878 | Msa0471620:intron | 50.0% |
| GGCAAGCATCCAGATAAGAG+TGG | - | chr3_3:74008953-74008972 | Msa0471620:intron | 50.0% | |
| GACAGTCCAACAATGGGGAA+TGG | - | chr3_3:74009312-74009331 | Msa0471620:intron | 50.0% | |
| GAGTCTCCATTCCCCATTGT+TGG | + | chr3_3:74009321-74009340 | None:intergenic | 50.0% | |
| CACATCTGGACAGCCAAAGA+GGG | + | chr3_3:74009539-74009558 | None:intergenic | 50.0% | |
| TGATGAGCTTGACCGCAACT+CGG | - | chr3_3:74009610-74009629 | Msa0471620:intron | 50.0% | |
| TGTAGGAATCGCGCGTATTG+GGG | - | chr3_3:74009830-74009849 | Msa0471620:intron | 50.0% | |
| CTTACCTCCCAGATATTCGC+AGG | + | chr3_3:74010077-74010096 | None:intergenic | 50.0% | |
| AGCGTCAGACATGACGGTGT+TGG | + | chr3_3:74003756-74003775 | None:intergenic | 55.0% | |
| ! | CGCCGCTAAGCCTTTTTGGA+TGG | - | chr3_3:74005237-74005256 | Msa0471620:intron | 55.0% |
| !! | ATATGGGTTGGTGACGGTGG+AGG | - | chr3_3:74005411-74005430 | Msa0471620:intron | 55.0% |
| ! | GGAGGCACAGGCATGTAAGT+CGG | - | chr3_3:74005429-74005448 | Msa0471620:intron | 55.0% |
| GTGGTGGTCGGAGTCGATTA+TGG | - | chr3_3:74005471-74005490 | Msa0471620:CDS | 55.0% | |
| CCCACGACGATGATAGAGGA+AGG | - | chr3_3:74007448-74007467 | Msa0471620:intron | 55.0% | |
| GCCTTCCTCTATCATCGTCG+TGG | + | chr3_3:74007452-74007471 | None:intergenic | 55.0% | |
| TCGGAGATTTCGAGGGCTCA+TGG | - | chr3_3:74007764-74007783 | Msa0471620:intron | 55.0% | |
| ACTGGGAACTCCCCCATCAA+TGG | + | chr3_3:74008084-74008103 | None:intergenic | 55.0% | |
| CCAGGTGGAAGTGAATGGTC+AGG | + | chr3_3:74008200-74008219 | None:intergenic | 55.0% | |
| CCTGACCATTCACTTCCACC+TGG | - | chr3_3:74008197-74008216 | Msa0471620:intron | 55.0% | |
| GACTGGGATTATGTGCAGCC+TGG | - | chr3_3:74008479-74008498 | Msa0471620:intron | 55.0% | |
| CTGGGATTATGTGCAGCCTG+GGG | - | chr3_3:74008481-74008500 | Msa0471620:intron | 55.0% | |
| TGGGATTATGTGCAGCCTGG+GGG | - | chr3_3:74008482-74008501 | Msa0471620:intron | 55.0% | |
| AGTAACAGTGGATCACCCCC+AGG | + | chr3_3:74008500-74008519 | None:intergenic | 55.0% | |
| ATGGCAGTTGCTGCATGAGC+CGG | + | chr3_3:74008545-74008564 | None:intergenic | 55.0% | |
| ACTCCACGACAGGACATACC+AGG | + | chr3_3:74008705-74008724 | None:intergenic | 55.0% | |
| GGTATGTCCTGTCGTGGAGT+TGG | - | chr3_3:74008705-74008724 | Msa0471620:intron | 55.0% | |
| GATGCAGTGCCATGAGAGGA+AGG | + | chr3_3:74008766-74008785 | None:intergenic | 55.0% | |
| ATGGCACTGCATCAAGAGCG+TGG | - | chr3_3:74008773-74008792 | Msa0471620:intron | 55.0% | |
| GGGGAATGGAGACTCACTGA+AGG | - | chr3_3:74009326-74009345 | Msa0471620:intron | 55.0% | |
| ATCTGGACAGCCAAAGAGGG+TGG | + | chr3_3:74009536-74009555 | None:intergenic | 55.0% | |
| CCACATCTGGACAGCCAAAG+AGG | + | chr3_3:74009540-74009559 | None:intergenic | 55.0% | |
| CCTCTTTGGCTGTCCAGATG+TGG | - | chr3_3:74009537-74009556 | Msa0471620:intron | 55.0% | |
| TTCCAATTCGCTCGCAACCC+TGG | - | chr3_3:74009644-74009663 | Msa0471620:intron | 55.0% | |
| TCCAATTCGCTCGCAACCCT+GGG | - | chr3_3:74009645-74009664 | Msa0471620:intron | 55.0% | |
| GGGGAGGTTGTGTTTGTGAG+AGG | - | chr3_3:74009849-74009868 | Msa0471620:intron | 55.0% | |
| TGCTCCTGCGAATATCTGGG+AGG | - | chr3_3:74010070-74010089 | Msa0471620:CDS | 55.0% | |
| ! | GGGAGCGTGCTGCTGAGATT+CGG | + | chr3_3:74003792-74003811 | None:intergenic | 60.0% |
| ACGTTTGCCGGGGATGGTAG+GGG | + | chr3_3:74003813-74003832 | None:intergenic | 60.0% | |
| GACGTTTGCCGGGGATGGTA+GGG | + | chr3_3:74003814-74003833 | None:intergenic | 60.0% | |
| TCAGTACGGGGACGTTTGCC+GGG | + | chr3_3:74003824-74003843 | None:intergenic | 60.0% | |
| GTCAGTACGGGGACGTTTGC+CGG | + | chr3_3:74003825-74003844 | None:intergenic | 60.0% | |
| TGGTCGAGTCAAGACAGCGG+CGG | + | chr3_3:74004907-74004926 | None:intergenic | 60.0% | |
| GGCTCATGCAGCAACTGCCA+TGG | - | chr3_3:74008544-74008563 | Msa0471620:intron | 60.0% | |
| CTTCCTGCTGCCACCCTCTT+TGG | - | chr3_3:74009523-74009542 | Msa0471620:intron | 60.0% | |
| TCCCAGGGTTGCGAGCGAAT+TGG | + | chr3_3:74009649-74009668 | None:intergenic | 60.0% | |
| AATTCGCTCGCAACCCTGGG+AGG | - | chr3_3:74009648-74009667 | Msa0471620:intron | 60.0% | |
| AGGAATCGCGCGTATTGGGG+AGG | - | chr3_3:74009833-74009852 | Msa0471620:intron | 60.0% | |
| CGTTTGCCGGGGATGGTAGG+GGG | + | chr3_3:74003812-74003831 | None:intergenic | 65.0% | |
| GGACGTTTGCCGGGGATGGT+AGG | + | chr3_3:74003815-74003834 | None:intergenic | 65.0% | |
| CAGTACGGGGACGTTTGCCG+GGG | + | chr3_3:74003823-74003842 | None:intergenic | 65.0% | |
| TGGTGCAGCACAGGAGCCGA+GGG | + | chr3_3:74004823-74004842 | None:intergenic | 65.0% | |
| CTAGGGCAGTGGTGCAGCAC+AGG | + | chr3_3:74004832-74004851 | None:intergenic | 65.0% | |
| CTGTGCTGCACCACTGCCCT+AGG | - | chr3_3:74004830-74004849 | Msa0471620:intron | 65.0% | |
| !! | GTTGGTGACGGTGGAGGCAC+AGG | - | chr3_3:74005417-74005436 | Msa0471620:intron | 65.0% |
| CAGCCAAAGAGGGTGGCAGC+AGG | + | chr3_3:74009529-74009548 | None:intergenic | 65.0% | |
| AACCCTGGGAGGTCAGGTGG+CGG | - | chr3_3:74009659-74009678 | Msa0471620:intron | 65.0% | |
| CACGCTCCCCCTACCATCCC+CGG | - | chr3_3:74003803-74003822 | Msa0471620:three_prime_UTR | 70.0% | |
| ACGGGGACGTTTGCCGGGGA+TGG | + | chr3_3:74003819-74003838 | None:intergenic | 70.0% | |
| GTGGTGCAGCACAGGAGCCG+AGG | + | chr3_3:74004824-74004843 | None:intergenic | 70.0% | |
| GCTCGCAACCCTGGGAGGTC+AGG | - | chr3_3:74009653-74009672 | Msa0471620:intron | 70.0% | |
| CGCAACCCTGGGAGGTCAGG+TGG | - | chr3_3:74009656-74009675 | Msa0471620:intron | 70.0% | |
| ACCCTGGGAGGTCAGGTGGC+GGG | - | chr3_3:74009660-74009679 | Msa0471620:intron | 70.0% | |
| !! | AGGTCAGGTGGCGGGCATCG+TGG | - | chr3_3:74009668-74009687 | Msa0471620:intron | 70.0% |
| GCCCGCCACCTGACCTCCCA+GGG | + | chr3_3:74009664-74009683 | None:intergenic | 75.0% | |
| TGCCCGCCACCTGACCTCCC+AGG | + | chr3_3:74009665-74009684 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 74003627 | 74010255 | 74003627 | ID=Msa0471620;Name=Msa0471620 |
| chr3_3 | mRNA | 74003627 | 74010255 | 74003627 | ID=Msa0471620-mRNA-1;Parent=Msa0471620;Name=Msa0471620-mRNA-1;_AED=0.16;_eAED=0.16;_QI=137|1|1|1|0.83|0.71|7|437|228 |
| chr3_3 | exon | 74003627 | 74004047 | 74003627 | ID=Msa0471620-mRNA-1:exon:18867;Parent=Msa0471620-mRNA-1 |
| chr3_3 | exon | 74004166 | 74004282 | 74004166 | ID=Msa0471620-mRNA-1:exon:18866;Parent=Msa0471620-mRNA-1 |
| chr3_3 | exon | 74005304 | 74005385 | 74005304 | ID=Msa0471620-mRNA-1:exon:18865;Parent=Msa0471620-mRNA-1 |
| chr3_3 | exon | 74005458 | 74005519 | 74005458 | ID=Msa0471620-mRNA-1:exon:18864;Parent=Msa0471620-mRNA-1 |
| chr3_3 | exon | 74005601 | 74005835 | 74005601 | ID=Msa0471620-mRNA-1:exon:18863;Parent=Msa0471620-mRNA-1 |
| chr3_3 | exon | 74006349 | 74006470 | 74006349 | ID=Msa0471620-mRNA-1:exon:18862;Parent=Msa0471620-mRNA-1 |
| chr3_3 | exon | 74010034 | 74010255 | 74010034 | ID=Msa0471620-mRNA-1:exon:18861;Parent=Msa0471620-mRNA-1 |
| chr3_3 | five_prime_UTR | 74010119 | 74010255 | 74010119 | ID=Msa0471620-mRNA-1:five_prime_utr;Parent=Msa0471620-mRNA-1 |
| chr3_3 | CDS | 74010034 | 74010118 | 74010034 | ID=Msa0471620-mRNA-1:cds;Parent=Msa0471620-mRNA-1 |
| chr3_3 | CDS | 74006349 | 74006470 | 74006349 | ID=Msa0471620-mRNA-1:cds;Parent=Msa0471620-mRNA-1 |
| chr3_3 | CDS | 74005601 | 74005835 | 74005601 | ID=Msa0471620-mRNA-1:cds;Parent=Msa0471620-mRNA-1 |
| chr3_3 | CDS | 74005458 | 74005519 | 74005458 | ID=Msa0471620-mRNA-1:cds;Parent=Msa0471620-mRNA-1 |
| chr3_3 | CDS | 74005304 | 74005385 | 74005304 | ID=Msa0471620-mRNA-1:cds;Parent=Msa0471620-mRNA-1 |
| chr3_3 | CDS | 74004182 | 74004282 | 74004182 | ID=Msa0471620-mRNA-1:cds;Parent=Msa0471620-mRNA-1 |
| chr3_3 | three_prime_UTR | 74004166 | 74004181 | 74004166 | ID=Msa0471620-mRNA-1:three_prime_utr;Parent=Msa0471620-mRNA-1 |
| chr3_3 | three_prime_UTR | 74003627 | 74004047 | 74003627 | ID=Msa0471620-mRNA-1:three_prime_utr;Parent=Msa0471620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
