AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0164360

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0164360 MtrunA17_Chr8g0390921 97.079 582 11 2 1 582 1 576 0.0 1159
Msa0164360 MtrunA17_Chr8g0390931 80.855 585 90 5 1 582 1 566 0.0 912
Msa0164360 MtrunA17_Chr8g0390901 92.457 464 29 3 120 582 10 468 0.0 883
Msa0164360 MtrunA17_Chr6g0484691 68.509 597 164 6 4 582 7 597 0.0 788
Msa0164360 MtrunA17_Chr1g0210101 54.513 565 224 10 6 563 48 586 0.0 602
Msa0164360 MtrunA17_Chr1g0212201 30.097 515 316 9 52 559 27 504 6.99e-75 248
Msa0164360 MtrunA17_Chr1g0212251 30.309 518 321 11 52 565 23 504 7.15e-74 245
Msa0164360 MtrunA17_Chr1g0212291 31.528 517 310 11 52 559 24 505 8.15e-73 242
Msa0164360 MtrunA17_Chr4g0054741 32.485 511 302 10 52 559 35 505 1.66e-72 241
Msa0164360 MtrunA17_Chr1g0188871 36.612 366 210 9 53 413 34 382 3.01e-72 239
Msa0164360 MtrunA17_Chr1g0188881 34.865 370 216 8 48 413 41 389 8.84e-66 222
Msa0164360 MtrunA17_Chr8g0390911 86.179 123 13 3 1 121 1 121 8.83e-63 202
Msa0164360 MtrunA17_Chr2g0321971 34.356 326 196 5 66 385 37 350 1.83e-61 210
Msa0164360 MtrunA17_Chr2g0321961 34.402 343 205 7 48 387 26 351 7.85e-60 205
Msa0164360 MtrunA17_Chr4g0025591 32.184 348 222 6 43 387 19 355 6.28e-57 198
Msa0164360 MtrunA17_Chr7g0267471 34.615 338 206 5 51 385 27 352 3.86e-55 194
Msa0164360 MtrunA17_Chr7g0259731 32.647 340 209 9 71 403 61 387 5.32e-54 189
Msa0164360 MtrunA17_Chr5g0400471 28.814 472 265 12 121 559 3 436 1.51e-44 164
Msa0164360 MtrunA17_Chr4g0054771 29.250 400 232 10 166 559 3 357 1.49e-43 160
Msa0164360 MtrunA17_Chr6g0454771 83.544 79 13 0 120 198 39 117 1.28e-37 135
Msa0164360 MtrunA17_Chr1g0189041 85.714 56 8 0 143 198 1 56 1.22e-27 105
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0164360 AT3G18440.1 59.829 585 188 8 6 560 3 570 0.0 680
Msa0164360 AT1G18420.1 57.218 568 217 10 9 563 27 581 0.0 630
Msa0164360 AT1G18420.2 61.310 504 182 7 67 563 1 498 0.0 619
Msa0164360 AT1G68600.1 58.235 510 183 10 63 563 45 533 0.0 566
Msa0164360 AT1G25480.1 53.832 561 226 9 17 563 4 545 0.0 560
Msa0164360 AT2G17470.2 53.097 565 218 11 23 576 19 547 0.0 560
Msa0164360 AT2G17470.1 53.214 560 215 11 28 576 2 525 0.0 559
Msa0164360 AT4G17970.1 31.879 527 329 12 57 568 30 541 1.32e-79 261
Msa0164360 AT5G46610.1 30.769 533 328 11 47 565 22 527 2.62e-78 257
Msa0164360 AT5G46600.1 31.041 538 317 12 44 559 20 525 2.45e-74 247
Msa0164360 AT1G08430.1 34.188 351 212 7 60 401 7 347 3.90e-67 226
Msa0164360 AT4G00910.1 31.492 362 236 6 53 408 42 397 7.98e-65 220
Msa0164360 AT1G08440.1 33.333 345 210 7 60 398 7 337 4.82e-64 218
Msa0164360 AT5G46610.2 27.820 532 321 12 47 565 22 503 1.24e-63 218
Msa0164360 AT5G46610.3 27.841 528 303 12 47 565 22 480 3.17e-59 205
Msa0164360 AT2G27240.2 30.564 337 224 5 60 393 7 336 3.20e-57 199
Msa0164360 AT3G11680.1 36.420 324 191 6 66 386 36 347 1.80e-56 198
Msa0164360 AT3G11680.2 36.533 323 190 6 66 385 38 348 1.92e-56 197
Msa0164360 AT2G27240.1 30.532 357 224 8 60 393 7 362 3.55e-56 197

Find 234 sgRNAs with CRISPR-Local

Find 1220 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTTAAAGCCTTATGAATA+TGG 0.161318 1_4:-43644099 Msa0164360:three_prime_UTR
ACTTTGAAGCCTTATGAATA+TGG 0.174410 1_4:-43649013 Msa0164360:CDS
TGTAGCAAGGCTTCAAAATT+TGG 0.196428 1_4:-43642022 Msa0164360:three_prime_UTR
TCTAAGACATTGCGCATTTA+TGG 0.211781 1_4:-43642975 Msa0164360:three_prime_UTR
ACTTGGTGCTGCTGTATCTT+TGG 0.219480 1_4:-43648891 Msa0164360:CDS
TATCTTCATCCATGTGAAAT+AGG 0.224414 1_4:+43647338 None:intergenic
ACTTGGTGCTGCTGTCTCTT+TGG 0.230921 1_4:-43643977 Msa0164360:three_prime_UTR
AAGGGGTTTAATAGAGGATT+AGG 0.232555 1_4:-43644255 Msa0164360:three_prime_UTR
GGGTGAGAAAGCTAACTTTA+AGG 0.239700 1_4:-43641980 Msa0164360:three_prime_UTR
GGGTGAGAAAGCTAACTTTA+AGG 0.239700 1_4:-43646999 Msa0164360:CDS
TCCTTGTAAATTCAGAGTTC+TGG 0.243327 1_4:-43642380 Msa0164360:three_prime_UTR
TAGTAACCTCTGGTGGATTT+TGG 0.246906 1_4:-43641936 Msa0164360:three_prime_UTR
TATCAAGAACTTGGCTTTCA+TGG 0.255950 1_4:+43641857 None:intergenic
TATTGCTACATTACGGTATC+TGG 0.258630 1_4:-43644054 Msa0164360:three_prime_UTR
TATTGCTACATTACGGTATC+TGG 0.258630 1_4:-43648968 Msa0164360:CDS
TTATACTTTAGCTGAGAAAA+AGG 0.264645 1_4:-43650749 Msa0164360:CDS
CGGTGGCCTCTGGCGGGTTT+TGG 0.270967 1_4:-43646955 Msa0164360:CDS
TGCTTGGTAAGTAAGAATTT+TGG 0.275636 1_4:+43643239 None:intergenic
CACGGGTGTTGCAACATCTT+TGG 0.277271 1_4:-43648801 Msa0164360:CDS
ATGCATACTTTCTGAAATTC+AGG 0.279585 1_4:-43648026 Msa0164360:intron
AGTGGACTCATTTGAAGAAT+TGG 0.284232 1_4:-43647020 Msa0164360:CDS
AGCTTGGTAAGTCAGAATTT+TGG 0.284312 1_4:+43648336 None:intergenic
CATGGGTGTTGCAACATCTT+TGG 0.284675 1_4:-43643887 Msa0164360:three_prime_UTR
CTTGGTGCTGCTGTCTCTTT+GGG 0.292196 1_4:-43643976 Msa0164360:three_prime_UTR
CAAGTTCTTGATAGAATAAT+AGG 0.293561 1_4:-43641847 Msa0164360:three_prime_UTR
AGAGGGTTTAACAGAGGATT+AGG 0.297132 1_4:-43649169 Msa0164360:CDS
ATATCTGCATATATCCTATC+TGG 0.298144 1_4:-43643948 Msa0164360:three_prime_UTR
ATATCTGCATATATCCTATC+TGG 0.298144 1_4:-43648862 Msa0164360:CDS
TCTTGTATTCTACACAATTA+AGG 0.310510 1_4:+43648368 None:intergenic
TGCTAAAATGGGTCTTGCTT+TGG 0.318097 1_4:-43650551 Msa0164360:CDS
TCCTTGTAAACTCAGAGTTC+TGG 0.320441 1_4:-43647411 Msa0164360:CDS
GATCTGTAGCCACTGTAAAC+TGG 0.326018 1_4:+43643204 None:intergenic
GATCTGTAGCCACTGTAAAC+TGG 0.326018 1_4:+43648301 None:intergenic
TAAATCTGTTCCTATTCATT+AGG 0.330110 1_4:-43658741 Msa0164360:five_prime_UTR
TCCATGTGAAAGAGGCCTTT+TGG 0.338585 1_4:+43642318 None:intergenic
TTCCGATGTTCCGATAATAT+TGG 0.342116 1_4:-43658764 Msa0164360:five_prime_UTR
CAATTGAAGTTCAAAACAAT+TGG 0.343510 1_4:-43647264 Msa0164360:CDS
CCACCGCGTCTTGCTGTTCA+AGG 0.347600 1_4:+43646972 None:intergenic
ATATTAGCCGTCACTCTGTT+TGG 0.348827 1_4:-43644828 Msa0164360:three_prime_UTR
CTTGGTGCTGCTGTATCTTT+GGG 0.350864 1_4:-43648890 Msa0164360:CDS
ATGATGATCACCACCCTTCA+TGG 0.354913 1_4:+43650714 None:intergenic
GGTGGATGCATTTGAAGAAT+TGG 0.360086 1_4:-43642001 Msa0164360:three_prime_UTR
TCATCATTACTTTCATCTCT+TGG 0.366431 1_4:+43647373 None:intergenic
CTTTAAAGCCTTATGAATAT+GGG 0.366850 1_4:-43644098 Msa0164360:three_prime_UTR
CTTTGAAGCCTTATGAATAT+GGG 0.373468 1_4:-43649012 Msa0164360:CDS
AACAGATTTACCAATATTAT+CGG 0.373477 1_4:+43658754 None:intergenic
TCCATGTGAAATAGGCCTTT+AGG 0.373875 1_4:+43647346 None:intergenic
CAATTGAAGTTCAAAACAAC+TGG 0.376361 1_4:-43642236 Msa0164360:three_prime_UTR
GCGCAACACTCTTGCTCCTT+CGG 0.378158 1_4:+43647546 None:intergenic
CCTTGTAAATTCAGAGTTCT+GGG 0.378594 1_4:-43642379 Msa0164360:three_prime_UTR
GGTTATTCTCGTATAGGAAA+TGG 0.382637 1_4:-43650691 Msa0164360:CDS
AGCAAGGCTTCAAAATTTAG+TGG 0.384771 1_4:-43647038 Msa0164360:CDS
CATCATGGTTATTCTCGTAT+AGG 0.388681 1_4:-43650697 Msa0164360:CDS
CTATTATTCTATCAAGAACT+TGG 0.389747 1_4:+43641848 None:intergenic
TTACTACACTTTGTTGTTCA+AGG 0.391681 1_4:+43641953 None:intergenic
GATTACTTATTGCTACATTA+CGG 0.393061 1_4:-43648975 Msa0164360:CDS
GTGGACTCATTTGAAGAATT+GGG 0.396405 1_4:-43647019 Msa0164360:CDS
CAGCAAGACGCGGTGGCCTC+TGG 0.399863 1_4:-43646965 Msa0164360:CDS
ATTCATAAGGCTTCAAAGTT+GGG 0.401142 1_4:+43649017 None:intergenic
GATCACTTATTGCTACATTA+CGG 0.403148 1_4:-43644061 Msa0164360:three_prime_UTR
TTCTCGTATAGGAATTGGTT+TGG 0.404394 1_4:-43645028 Msa0164360:intron
GCAAGAGTGTTGCGCGAACT+TGG 0.410191 1_4:-43647538 Msa0164360:CDS
TCTAAGACATTGTGCATTCA+TGG 0.410766 1_4:-43648065 Msa0164360:CDS
GTTCTTTGAGGAAAATCAAA+AGG 0.413058 1_4:+43644863 None:intergenic
ATTGAAGCAGTTAAACAATC+TGG 0.415994 1_4:+43641912 None:intergenic
CCCAGAACTCTGAATTTACA+AGG 0.416133 1_4:+43642379 None:intergenic
GCACCAAAGTTAGCGAAATC+AGG 0.416566 1_4:-43650781 Msa0164360:CDS
AATTCAGAGTTCTGGGAAAT+CGG 0.416784 1_4:-43642372 Msa0164360:three_prime_UTR
ATTATCAGTACATTCATTGT+TGG 0.417464 1_4:-43649067 Msa0164360:CDS
CGTAAAATAACCTAATGAAT+AGG 0.418306 1_4:+43658731 None:intergenic
GATCCTGATTTCGCTAACTT+TGG 0.426719 1_4:+43650778 None:intergenic
TATTAGCCGTCACTCTGTTT+GGG 0.427910 1_4:-43644827 Msa0164360:three_prime_UTR
CCTTGTAAACTCAGAGTTCT+GGG 0.428484 1_4:-43647410 Msa0164360:CDS
GGAGGACTTGCTGTCGGAAT+GGG 0.436199 1_4:-43644219 Msa0164360:three_prime_UTR
GGAGGACTTGCTGTCGGAAT+GGG 0.436199 1_4:-43649133 Msa0164360:CDS
AGGGGTTTAATAGAGGATTA+GGG 0.437191 1_4:-43644254 Msa0164360:three_prime_UTR
GTTTAACTACTTCAAATCCT+AGG 0.438117 1_4:-43646924 Msa0164360:exon
TATTCATAAGGCTTTAAAGT+TGG 0.439512 1_4:+43644102 None:intergenic
ATTATCAGTACATTCATTGT+TGG 0.439559 1_4:-43644153 Msa0164360:three_prime_UTR
GTGGATGCATTTGAAGAATT+GGG 0.441880 1_4:-43642000 Msa0164360:three_prime_UTR
TATTCATAAGGCTTCAAAGT+TGG 0.450013 1_4:+43649016 None:intergenic
CTTAAGAGGGTAGGCTCTGA+AGG 0.452219 1_4:-43642531 Msa0164360:three_prime_UTR
ATCAGCATTGGCTGGAGAAT+GGG 0.456270 1_4:-43644190 Msa0164360:three_prime_UTR
AATTGAAGTTCAAAACAATT+GGG 0.458526 1_4:-43647263 Msa0164360:CDS
GCAAAAGTGTTGCGCGAACT+AGG 0.460895 1_4:-43642507 Msa0164360:three_prime_UTR
CTGAGCAAGGGGTTTAATAG+AGG 0.461232 1_4:-43644261 Msa0164360:three_prime_UTR
ATCAGCATTGGCAGGAGAAT+GGG 0.461506 1_4:-43649104 Msa0164360:CDS
ATGCATACTTTCTGAAATAC+AGG 0.466335 1_4:-43642936 Msa0164360:intron
ACCAGAAGTCAAAGCAAAAG+AGG 0.466634 1_4:-43647134 Msa0164360:CDS
ACGGTATCTGGTTATCATAC+TGG 0.468778 1_4:-43644042 Msa0164360:three_prime_UTR
TATCAGCATTGGCTGGAGAA+TGG 0.469213 1_4:-43644191 Msa0164360:three_prime_UTR
CAAGACGCGGTGGCCTCTGG+CGG 0.471405 1_4:-43646962 Msa0164360:CDS
TATCAGCATTGGCAGGAGAA+TGG 0.471652 1_4:-43649105 Msa0164360:CDS
TGCATATATCCTATCTGGGC+TGG 0.472223 1_4:-43648857 Msa0164360:CDS
TACAAGTAACGAGGACTCAT+TGG 0.472395 1_4:-43643169 Msa0164360:intron
TACAAGTAAAGAGGACTCAT+TGG 0.473626 1_4:-43648266 Msa0164360:intron
GAGGGTTTAACAGAGGATTA+GGG 0.474453 1_4:-43649168 Msa0164360:CDS
ACACTCCATTTGTCAATCCT+AGG 0.475297 1_4:+43646907 None:intergenic
AAAACATGTCTCTTCTCAGC+TGG 0.479127 1_4:+43647595 None:intergenic
CCCAGAACTCTGAGTTTACA+AGG 0.479823 1_4:+43647410 None:intergenic
GCTTTGTAGTAAACATGAGC+AGG 0.481286 1_4:+43642123 None:intergenic
ACAAAATGCTTAACTATCCA+TGG 0.482446 1_4:-43648114 Msa0164360:CDS
AGATCCTCGCCAGCCCAGAT+AGG 0.482958 1_4:+43643934 None:intergenic
AAGAATTATGTCAAAGTAAG+CGG 0.491923 1_4:-43648091 Msa0164360:CDS
TGGAGGACTTGCTGTCGGAA+TGG 0.492246 1_4:-43644220 Msa0164360:three_prime_UTR
TGGAGGACTTGCTGTCGGAA+TGG 0.492246 1_4:-43649134 Msa0164360:CDS
ACAAATAAAGCAAACAATCA+TGG 0.495088 1_4:-43650803 Msa0164360:exon
GTAGTCTTTGAATTCAGTAT+AGG 0.495568 1_4:-43644787 Msa0164360:intron
CACCGCGTCTTGCTGTTCAA+GGG 0.498901 1_4:+43646973 None:intergenic
AGAACAAGATGAATCTAAGT+TGG 0.502452 1_4:-43645001 Msa0164360:three_prime_UTR
TACTACACTTTGTTGTTCAA+GGG 0.506449 1_4:+43641954 None:intergenic
TGCATATATCCTATCTGGGC+TGG 0.507646 1_4:-43643943 Msa0164360:three_prime_UTR
GGTTTGTAGTAAACATGAGC+AGG 0.510304 1_4:+43647154 None:intergenic
AACTCAGAGTTCTGGGAGAT+CGG 0.510626 1_4:-43647403 Msa0164360:CDS
AAATCCTCTCCAGCCCAGAT+AGG 0.512204 1_4:+43648848 None:intergenic
AAAACCTGTCTCTTCTCAGC+TGG 0.512258 1_4:+43642564 None:intergenic
TCCAAAAGGCCTCTTTCACA+TGG 0.513682 1_4:-43642319 Msa0164360:three_prime_UTR
AGAATTATGTCAAAGTAAGC+GGG 0.515041 1_4:-43648090 Msa0164360:CDS
CATTACTTTCATCTCTTGGA+CGG 0.515706 1_4:+43647377 None:intergenic
GAAAATGATGATCTTCCAAA+AGG 0.515816 1_4:-43642333 Msa0164360:three_prime_UTR
TATCTTCATCCATGTGAAAG+AGG 0.516928 1_4:+43642310 None:intergenic
ATCTGTAGCCACTGTAAACT+GGG 0.516939 1_4:+43643205 None:intergenic
ATCTGTAGCCACTGTAAACT+GGG 0.516939 1_4:+43648302 None:intergenic
ACTTTCACATAATTCTTCCA+TGG 0.517823 1_4:+43643007 None:intergenic
AAGAATTATGTGAAAGTAAG+CGG 0.517864 1_4:-43643001 Msa0164360:three_prime_UTR
CTGGGTCATCAGCAGCTGCT+TGG 0.517928 1_4:+43643223 None:intergenic
AAGACGCGGTGGCCTCTGGC+GGG 0.520846 1_4:-43646961 Msa0164360:CDS
CGCAATGAGCTTAAGAGGGT+AGG 0.523161 1_4:-43642540 Msa0164360:three_prime_UTR
AGTAATGATGATCATCCTAA+AGG 0.524199 1_4:-43647361 Msa0164360:CDS
GGCAGGGGCAACTCTGAGCA+AGG 0.524454 1_4:-43644274 Msa0164360:intron
TGTTCTTGAAACAAACGTCT+TGG 0.526934 1_4:-43642146 Msa0164360:three_prime_UTR
ACAGAAGTCTTAAATATCCA+TGG 0.527503 1_4:-43643024 Msa0164360:three_prime_UTR
ACATTGCGCATTTATGGTCA+TGG 0.529280 1_4:-43642969 Msa0164360:three_prime_UTR
ACTTTGACATAATTCTTCCA+TGG 0.530519 1_4:+43648097 None:intergenic
ACCGCGTCTTGCTGTTCAAG+GGG 0.530520 1_4:+43646974 None:intergenic
GGAAAGACTTCTATCCATGA+AGG 0.532105 1_4:-43650728 Msa0164360:CDS
ACACGGAACCCATATTCATA+AGG 0.533524 1_4:+43644090 None:intergenic
ACACGGAACCCATATTCATA+AGG 0.533524 1_4:+43649004 None:intergenic
TGTTTACTACAAAGCAAAAG+AGG 0.534823 1_4:-43642115 Msa0164360:three_prime_UTR
TGTTGAATCTACAAGTAAAG+AGG 0.534833 1_4:-43648275 Msa0164360:CDS
TATCTGCATATATCCTATCT+GGG 0.534999 1_4:-43643947 Msa0164360:three_prime_UTR
GTAGTTGGGATTTGCTGTGT+GGG 0.535344 1_4:-43648155 Msa0164360:intron
CTTAAGAGGGTAGGTTCCGA+AGG 0.535826 1_4:-43647562 Msa0164360:CDS
AGAAGATGGAGAAACTAGAC+CGG 0.537613 1_4:-43642473 Msa0164360:three_prime_UTR
AGAATTATGTGAAAGTAAGC+GGG 0.537807 1_4:-43643000 Msa0164360:three_prime_UTR
CAGGGGCAACTCTGAACAGA+GGG 0.539129 1_4:-43649186 Msa0164360:CDS
TGCTTGTGAAACAAATGTCT+TGG 0.539539 1_4:-43647177 Msa0164360:CDS
AGGAAACAAAGTCAAGAAGA+TGG 0.541103 1_4:-43642487 Msa0164360:three_prime_UTR
AGCAAGGCTTCAAAATTTGG+TGG 0.544776 1_4:-43642019 Msa0164360:three_prime_UTR
GCAGGGGCAACTCTGAGCAA+GGG 0.549777 1_4:-43644273 Msa0164360:intron
CTCAATGAGCTTAAGAGGGT+AGG 0.551849 1_4:-43647571 Msa0164360:CDS
CAGGGGCAACTCTGAGCAAG+GGG 0.552318 1_4:-43644272 Msa0164360:three_prime_UTR
GGCTGTATTGTGATCAGTGA+CGG 0.553344 1_4:-43641826 Msa0164360:three_prime_UTR
CAAATCCTAGGATTGACAAA+TGG 0.553853 1_4:-43646912 Msa0164360:exon
ACAAGAGGAGGAATCTAAGA+TGG 0.555906 1_4:-43650656 Msa0164360:CDS
GGAGAGTTATCAGCATTGGC+TGG 0.555993 1_4:-43644198 Msa0164360:three_prime_UTR
CACTTAGAGACTTGTACTCT+AGG 0.557832 1_4:+43647308 None:intergenic
AATGGGAGAGTTATCAGCAT+TGG 0.562176 1_4:-43644202 Msa0164360:three_prime_UTR
GTCGTCTTTGAATTCAGTAT+AGG 0.562228 1_4:-43650448 Msa0164360:intron
GAAGTTGGGATTTGCTGTGT+GGG 0.562279 1_4:-43643065 Msa0164360:intron
GACAAATGGAGTGTGAAAAG+AGG 0.562677 1_4:-43646898 Msa0164360:intron
TTCTTTGAGGAAAATCAAAA+GGG 0.563074 1_4:+43644864 None:intergenic
CTGGGTCATCAGCAGCAGCT+TGG 0.563319 1_4:+43648320 None:intergenic
AATGGGAGAGTTATCAGCAT+TGG 0.564616 1_4:-43649116 Msa0164360:CDS
TGTAGTTGGGATTTGCTGTG+TGG 0.567271 1_4:-43648156 Msa0164360:intron
ACTACACTTTGTTGTTCAAG+GGG 0.569723 1_4:+43641955 None:intergenic
GAAGATGGAGAAACTAGACC+GGG 0.570769 1_4:-43642472 Msa0164360:three_prime_UTR
TTCTGATAGAATTTGTAGCA+AGG 0.570985 1_4:-43647054 Msa0164360:CDS
CGATAGAAGGAGGCACATCA+TGG 0.571917 1_4:+43642181 None:intergenic
ACATTGTGCATTCATGGTCA+TGG 0.573321 1_4:-43648059 Msa0164360:CDS
GGCACCAGCTGAGAAGAGAC+AGG 0.573385 1_4:-43642568 Msa0164360:three_prime_UTR
AAATGGGTCGTTCTGATCCA+AGG 0.574359 1_4:-43644933 Msa0164360:three_prime_UTR
AAATGGGTCGTTCTGATCCA+AGG 0.574359 1_4:-43650588 Msa0164360:CDS
GGATTAGGGACATTCTCAGC+TGG 0.575123 1_4:-43644240 Msa0164360:three_prime_UTR
TATCTGCATATATCCTATCT+GGG 0.575447 1_4:-43648861 Msa0164360:CDS
GGATTAGGGACATTGTCAGC+TGG 0.577735 1_4:-43649154 Msa0164360:CDS
GGAGAGTTATCAGCATTGGC+AGG 0.580507 1_4:-43649112 Msa0164360:CDS
CAACAAAGTGTAGTAACCTC+TGG 0.585223 1_4:-43641946 Msa0164360:three_prime_UTR
TCCTAAAGGCCTATTTCACA+TGG 0.586405 1_4:-43647347 Msa0164360:CDS
AGAAAGTATGCATCCATGCA+TGG 0.588555 1_4:+43642946 None:intergenic
ATGAAGGGTGGTGATCATCA+TGG 0.589330 1_4:-43650712 Msa0164360:CDS
ACGGTATCTGGTTATCATAG+TGG 0.592869 1_4:-43648956 Msa0164360:CDS
AGAGTGACGGCTAAAATCGA+AGG 0.594752 1_4:+43650495 None:intergenic
TTCATGGTCATGGCTATGCA+TGG 0.595719 1_4:-43648049 Msa0164360:CDS
TACCAATATTATCGGAACAT+CGG 0.597475 1_4:+43658762 None:intergenic
CTACCCTCTTAAGCTCATTG+AGG 0.600615 1_4:+43647572 None:intergenic
CAAAGTGTAGTAACCTCTGG+TGG 0.600749 1_4:-43641943 Msa0164360:three_prime_UTR
TCAGCTGGAGGACTTGCTGT+CGG 0.601708 1_4:-43644225 Msa0164360:three_prime_UTR
TCAGCTGGAGGACTTGCTGT+CGG 0.601708 1_4:-43649139 Msa0164360:CDS
GGTGTTGCAACATCTTTGGA+AGG 0.603727 1_4:-43643883 Msa0164360:intron
TTTATGGTCATGGCCATGCA+TGG 0.604526 1_4:-43642959 Msa0164360:three_prime_UTR
GGTGTTGCAACATCTTTGGA+AGG 0.606641 1_4:-43648797 Msa0164360:intron
GAAAGACTTCTATCCATGAA+GGG 0.612843 1_4:-43650727 Msa0164360:CDS
TGAAGTTGGGATTTGCTGTG+TGG 0.613080 1_4:-43643066 Msa0164360:intron
TGGTTTGCTACAAGAACAAG+AGG 0.614623 1_4:-43650671 Msa0164360:CDS
CGAGGATCTGCATAACCTTG+TGG 0.616056 1_4:-43643920 Msa0164360:three_prime_UTR
TAACTGTGTTGAATACAAGA+AGG 0.623528 1_4:-43643268 Msa0164360:three_prime_UTR
TTTCCTCAATGAGCTTAAGA+GGG 0.626391 1_4:-43647575 Msa0164360:CDS
ATATCCTATCTGGGCTGGAG+AGG 0.638574 1_4:-43648852 Msa0164360:CDS
ATATCCTATCTGGGCTGGCG+AGG 0.639896 1_4:-43643938 Msa0164360:three_prime_UTR
GAATTCAAAGACGACGACGA+CGG 0.642329 1_4:+43650456 None:intergenic
CTTCATACAACAAATCTCCC+CGG 0.643096 1_4:+43642454 None:intergenic
TGGCAATAGGAGGCACAGCA+TGG 0.643902 1_4:+43647209 None:intergenic
AATTGAAGTTCAAAACAACT+GGG 0.652975 1_4:-43642235 Msa0164360:three_prime_UTR
TTAGGGACATTCTCAGCTGG+AGG 0.653052 1_4:-43644237 Msa0164360:three_prime_UTR
GAATAGCCCAAACAGAGTGA+CGG 0.657361 1_4:+43644821 None:intergenic
GAGTGACGGCTAAAATCGAA+GGG 0.657783 1_4:+43650496 None:intergenic
GCAGGGGCAACTCTGAACAG+AGG 0.659233 1_4:-43649187 Msa0164360:intron
GCTGTGTGGGAACCACCTCA+TGG 0.660310 1_4:-43643052 Msa0164360:three_prime_UTR
TTAGGGACATTGTCAGCTGG+AGG 0.660740 1_4:-43649151 Msa0164360:CDS
CTGAACAGAGGGTTTAACAG+AGG 0.665152 1_4:-43649175 Msa0164360:CDS
TAATTGTGTAGAATACAAGA+AGG 0.665618 1_4:-43648365 Msa0164360:CDS
GAATTATGTCAAAGTAAGCG+GGG 0.667762 1_4:-43648089 Msa0164360:CDS
GAATAGCCCAAACAGAGTGA+CGG 0.668186 1_4:+43650482 None:intergenic
AGACTTCTGTAGTGACCATG+AGG 0.671026 1_4:+43643037 None:intergenic
CCGCGTCTTGCTGTTCAAGG+GGG 0.674384 1_4:+43646975 None:intergenic
AATAAGTGATCAAGAACACA+CGG 0.676225 1_4:+43644073 None:intergenic
CCTTGAACAGCAAGACGCGG+TGG 0.679970 1_4:-43646972 Msa0164360:CDS
TTTGCTACAAGAACAAGAGG+AGG 0.680569 1_4:-43650668 Msa0164360:CDS
GCTGTGTGGGAACCACCTCA+TGG 0.682126 1_4:-43648142 Msa0164360:CDS
CTTCTGTAGTGACCATGAGG+TGG 0.684280 1_4:+43643040 None:intergenic
GCTGATGACCCAGTTTACAG+TGG 0.684325 1_4:-43643213 Msa0164360:three_prime_UTR
CTACACTTTGTTGTTCAAGG+GGG 0.690469 1_4:+43641956 None:intergenic
GAATTATGTGAAAGTAAGCG+GGG 0.695698 1_4:-43642999 Msa0164360:three_prime_UTR
AATAAGTAATCAAGAACACA+CGG 0.696265 1_4:+43648987 None:intergenic
GCTGATGACCCAGTTTACAG+TGG 0.697546 1_4:-43648310 Msa0164360:CDS
AGACTTCTATCCATGAAGGG+TGG 0.700795 1_4:-43650724 Msa0164360:CDS
AAGATGGAGAAACTAGACAG+AGG 0.705496 1_4:-43647502 Msa0164360:CDS
TTTGCTGTTTGATGTACACG+AGG 0.709942 1_4:-43647476 Msa0164360:CDS
TCTGGTCCAAAATCCACCAG+AGG 0.726888 1_4:+43641930 None:intergenic
TGTTGAATCTACAAGTAACG+AGG 0.739666 1_4:-43643178 Msa0164360:three_prime_UTR
AAGATGGAGAAACTAGACCG+GGG 0.758338 1_4:-43642471 Msa0164360:three_prime_UTR
AGAACTCTGAATTTACAAGG+AGG 0.765806 1_4:+43642382 None:intergenic
AGAACTCTGAGTTTACAAGG+AGG 0.792854 1_4:+43647413 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTATTATTAATTAATAT+AGG + chr1_4:43649395-43649414 None:intergenic 0.0%
!!! TATTAATTTTATTTTTTTAT+AGG + chr1_4:43655009-43655028 None:intergenic 0.0%
!!! TATTTACAAAAGTATAAAAA+GGG + chr1_4:43644209-43644228 None:intergenic 10.0%
!!! AGAAAATATTTTATAAGTTT+TGG - chr1_4:43645436-43645455 Msa0164360:intron 10.0%
!! ATATATATATATATATGATG+TGG + chr1_4:43647158-43647177 None:intergenic 10.0%
!! TTATAATAATGTTATATTGT+TGG + chr1_4:43647337-43647356 None:intergenic 10.0%
!!! TGATACTTTTATTTTATTTT+TGG - chr1_4:43648054-43648073 Msa0164360:CDS 10.0%
!!! GATACTTTTATTTTATTTTT+GGG - chr1_4:43648055-43648074 Msa0164360:CDS 10.0%
!!! AAATTTTGGTTATATATTTA+GGG + chr1_4:43648150-43648169 None:intergenic 10.0%
!!! TAAATTTTGGTTATATATTT+AGG + chr1_4:43648151-43648170 None:intergenic 10.0%
!!! TTGTTCAAAATTTTAAATTT+TGG + chr1_4:43648164-43648183 None:intergenic 10.0%
!!! AATTGATACTTATATTTTTA+TGG + chr1_4:43648281-43648300 None:intergenic 10.0%
!!! GTATTTTTTTAAAAATGTTT+AGG + chr1_4:43648478-43648497 None:intergenic 10.0%
!!! TAGAATTTTTTTTTTATTCA+AGG - chr1_4:43648571-43648590 Msa0164360:intron 10.0%
!!! TTATAATGGATTTTTTTTAA+GGG + chr1_4:43648939-43648958 None:intergenic 10.0%
!!! TTTATAATGGATTTTTTTTA+AGG + chr1_4:43648940-43648959 None:intergenic 10.0%
!! ATTATAAAAAACAAAACTAA+TGG - chr1_4:43649411-43649430 Msa0164360:intron 10.0%
!! AAATTAATTATTTGATTAAG+TGG - chr1_4:43650735-43650754 Msa0164360:CDS 10.0%
!! AATTAATTATTTGATTAAGT+GGG - chr1_4:43650736-43650755 Msa0164360:CDS 10.0%
!!! TTTTTTTTTTTAAATCATGA+CGG + chr1_4:43653963-43653982 None:intergenic 10.0%
!!! ATTGAATAATTTGTTTTTTA+GGG + chr1_4:43654282-43654301 None:intergenic 10.0%
!! AAATATGTGTTTATTTATTT+AGG + chr1_4:43654482-43654501 None:intergenic 10.0%
!! CTATAATACATAAATTTAAA+AGG + chr1_4:43654728-43654747 None:intergenic 10.0%
!!! GTATTTTTTTATAATATTGA+TGG - chr1_4:43654772-43654791 Msa0164360:intron 10.0%
!!! TGTTTATATATTTTTTTAAG+GGG + chr1_4:43654843-43654862 None:intergenic 10.0%
!!! AATTATGTTGTGATATTTTT+TGG + chr1_4:43642653-43642672 None:intergenic 15.0%
!!! TATTTTAGATGCTTTTTATT+TGG + chr1_4:43642736-43642755 None:intergenic 15.0%
!! TATAAATAAAATTATTCGCA+TGG - chr1_4:43642817-43642836 Msa0164360:intron 15.0%
!! TAAAAAGTTATATTGAAGAA+GGG + chr1_4:43643265-43643284 None:intergenic 15.0%
!!! GTTTTAGAAAGAAAAAAAAA+AGG + chr1_4:43643378-43643397 None:intergenic 15.0%
!!! AAATTTTTCACATTTTTTGA+AGG - chr1_4:43643667-43643686 Msa0164360:intron 15.0%
!!! ACTTTGAAAGAAAAAAAAAA+AGG + chr1_4:43643791-43643810 None:intergenic 15.0%
!!! CTATTTACAAAAGTATAAAA+AGG + chr1_4:43644210-43644229 None:intergenic 15.0%
!!! ATTTTATGAATAAAATGCAA+TGG - chr1_4:43644427-43644446 Msa0164360:intron 15.0%
!! AAACTTTCTTCTTAATATAT+AGG - chr1_4:43645572-43645591 Msa0164360:intron 15.0%
!! AATTGAAATTGAAAACAATT+GGG - chr1_4:43645929-43645948 Msa0164360:intron 15.0%
!! ATTATACCACATTTATATAA+AGG + chr1_4:43646592-43646611 None:intergenic 15.0%
!! TTTATATAAATGTGGTATAA+TGG - chr1_4:43646591-43646610 Msa0164360:intron 15.0%
!!! TCGTTTAAAATTTTGATTAA+AGG + chr1_4:43646878-43646897 None:intergenic 15.0%
!!! ATTTTACTAAAAGAATAACT+AGG + chr1_4:43646907-43646926 None:intergenic 15.0%
!! TTAGTAAAATAACAAGAAAT+AGG - chr1_4:43646917-43646936 Msa0164360:exon 15.0%
!! ATCCAAAAATTGATAAATTA+GGG + chr1_4:43647043-43647062 None:intergenic 15.0%
!! AATCCAAAAATTGATAAATT+AGG + chr1_4:43647044-43647063 None:intergenic 15.0%
!! AAATTGCGAATTAAAAAATA+GGG + chr1_4:43647074-43647093 None:intergenic 15.0%
!! TTGTCATTGAAAAAAAAATA+TGG + chr1_4:43647267-43647286 None:intergenic 15.0%
!! AGACTATTTACTTTATATAT+AGG - chr1_4:43647420-43647439 Msa0164360:CDS 15.0%
!!! AAAATAGGAAAGTATAAATT+TGG + chr1_4:43647992-43648011 None:intergenic 15.0%
!!! AAATGATACTTTTTTTTTGA+AGG - chr1_4:43648023-43648042 Msa0164360:intron 15.0%
!!! GAAGAAAAAAAAACTTTTAA+AGG + chr1_4:43648902-43648921 None:intergenic 15.0%
!!! TATAATGGATTTTTTTTAAG+GGG + chr1_4:43648938-43648957 None:intergenic 15.0%
!! AACAATGTATAATATATGTA+AGG - chr1_4:43649029-43649048 Msa0164360:CDS 15.0%
!!! TTCTTTAAGAAAAATCAAAA+GGG + chr1_4:43650018-43650037 None:intergenic 15.0%
!!! TTATTTTGATCATTGATTAA+TGG - chr1_4:43650275-43650294 Msa0164360:intron 15.0%
!! AATTTGATATTTCGATAAAT+TGG - chr1_4:43650652-43650671 Msa0164360:CDS 15.0%
!! ATTTGATATTTCGATAAATT+GGG - chr1_4:43650653-43650672 Msa0164360:CDS 15.0%
!!! TCTTTTGATAAAAAATTTCA+CGG - chr1_4:43651715-43651734 Msa0164360:intron 15.0%
!!! AAAATGAACATTAAAGTTTT+TGG - chr1_4:43652644-43652663 Msa0164360:intron 15.0%
!!! TTTTTTTTTTAAATCATGAC+GGG + chr1_4:43653962-43653981 None:intergenic 15.0%
!!! TTTTTTTTTTGAAGACTTTT+TGG - chr1_4:43654065-43654084 Msa0164360:intron 15.0%
!!! CATTGAATAATTTGTTTTTT+AGG + chr1_4:43654283-43654302 None:intergenic 15.0%
!! CTAAAAAACAAATTATTCAA+TGG - chr1_4:43654281-43654300 Msa0164360:intron 15.0%
!!! TTTTTTATAATATTGATGGA+AGG - chr1_4:43654776-43654795 Msa0164360:intron 15.0%
!!! TTTTTATAATATTGATGGAA+GGG - chr1_4:43654777-43654796 Msa0164360:intron 15.0%
!! TTATGTTTATATCTATCTTA+TGG + chr1_4:43654818-43654837 None:intergenic 15.0%
!! AAATCAATTATTTGAATAAG+TGG - chr1_4:43656117-43656136 Msa0164360:intron 15.0%
!! AATCAATTATTTGAATAAGT+GGG - chr1_4:43656118-43656137 Msa0164360:intron 15.0%
!!! ATTTTATGATAAAAATGCAA+TGG - chr1_4:43656232-43656251 Msa0164360:intron 15.0%
!!! ATATTTTTATGACATTGAAA+AGG + chr1_4:43657799-43657818 None:intergenic 15.0%
!! AACAGATTTACCAATATTAT+CGG + chr1_4:43641783-43641802 None:intergenic 20.0%
!!! ATAATATTTGCTGCAAAAAT+GGG - chr1_4:43642096-43642115 Msa0164360:three_prime_UTR 20.0%
!!! TTCTTTGAGAAAAATCAAAA+GGG + chr1_4:43642142-43642161 None:intergenic 20.0%
!!! GTTTTAAATTGAAACCATTT+CGG - chr1_4:43642354-43642373 Msa0164360:three_prime_UTR 20.0%
!! TGAATGATTATTTATAAGCA+CGG - chr1_4:43642377-43642396 Msa0164360:three_prime_UTR 20.0%
!! ATATTACGCATCATATTATT+TGG - chr1_4:43642710-43642729 Msa0164360:intron 20.0%
!! ACAAAAAATATCAAAGACTT+AGG - chr1_4:43642775-43642794 Msa0164360:intron 20.0%
!!! AAAGAGAATTTTTTAGAGAA+TGG - chr1_4:43643140-43643159 Msa0164360:intron 20.0%
!! CTAAAAAGTTATATTGAAGA+AGG + chr1_4:43643266-43643285 None:intergenic 20.0%
!! AATTTACTTGTGAATTTGAA+TGG + chr1_4:43644151-43644170 None:intergenic 20.0%
!!! AGGGTATTCAATTTTTTTTT+TGG + chr1_4:43644190-43644209 None:intergenic 20.0%
!! TTTCATATTAAAGACATTTC+CGG + chr1_4:43644381-43644400 None:intergenic 20.0%
!! TCTTGTGATAAAAAATTTCA+AGG - chr1_4:43644824-43644843 Msa0164360:three_prime_UTR 20.0%
!! CTTGTGATAAAAAATTTCAA+GGG - chr1_4:43644825-43644844 Msa0164360:three_prime_UTR 20.0%
!!! TGTTTTTTTTGTTTTTGTGA+AGG - chr1_4:43645353-43645372 Msa0164360:intron 20.0%
!! CAATTGAAATTGAAAACAAT+TGG - chr1_4:43645928-43645947 Msa0164360:intron 20.0%
!! CAAATAGTTTCAAAACTTTA+TGG + chr1_4:43646351-43646370 None:intergenic 20.0%
!!! GAAATTTATGTTTTCTCTTT+CGG + chr1_4:43646553-43646572 None:intergenic 20.0%
!! AGAAAACATAAATTTCACAT+GGG - chr1_4:43646557-43646576 Msa0164360:intron 20.0%
!! TCCAAAAATTGATAAATTAG+GGG + chr1_4:43647042-43647061 None:intergenic 20.0%
!! GAAATTGCGAATTAAAAAAT+AGG + chr1_4:43647075-43647094 None:intergenic 20.0%
!! ATTATTGCAATCTATGAAAT+TGG - chr1_4:43647100-43647119 Msa0164360:CDS 20.0%
!!! TAAAGTAAATAGTCTCTTTT+AGG + chr1_4:43647415-43647434 None:intergenic 20.0%
!!! TTTTTTTGATAAATTCCTTC+CGG + chr1_4:43647657-43647676 None:intergenic 20.0%
!! GTTATAAATACATAATCCAA+TGG - chr1_4:43647725-43647744 Msa0164360:intron 20.0%
!!! TATAGATTGAAGATTCATTT+TGG - chr1_4:43647891-43647910 Msa0164360:intron 20.0%
!!! AGTATAAATTTGGTTTCTTA+GGG + chr1_4:43647982-43648001 None:intergenic 20.0%
!!! AAGTATAAATTTGGTTTCTT+AGG + chr1_4:43647983-43648002 None:intergenic 20.0%
!!! ATTTATACTTTCCTATTTTG+TGG - chr1_4:43647993-43648012 Msa0164360:intron 20.0%
!!! TTATTTTTGGGAGAATTAAT+TGG - chr1_4:43648067-43648086 Msa0164360:CDS 20.0%
!!! TATTTTTGGGAGAATTAATT+GGG - chr1_4:43648068-43648087 Msa0164360:CDS 20.0%
!! ATTGCAAACTTTCAAATATT+TGG - chr1_4:43648183-43648202 Msa0164360:intron 20.0%
!! TTGCAAACTTTCAAATATTT+GGG - chr1_4:43648184-43648203 Msa0164360:intron 20.0%
!!! GATACTTATATTTTTATGGT+GGG + chr1_4:43648277-43648296 None:intergenic 20.0%
!!! TGATACTTATATTTTTATGG+TGG + chr1_4:43648278-43648297 None:intergenic 20.0%
!!! TTGGTACTTTCATATTTTAT+GGG + chr1_4:43648309-43648328 None:intergenic 20.0%
!!! ATTGGTACTTTCATATTTTA+TGG + chr1_4:43648310-43648329 None:intergenic 20.0%
!!! TGAGTTTTGGATTTTTTTTA+AGG - chr1_4:43648420-43648439 Msa0164360:intron 20.0%
!!! TTACAAGTAAAGTTTCATTT+TGG + chr1_4:43648672-43648691 None:intergenic 20.0%
!!! ATAATGGATTTTTTTTAAGG+GGG + chr1_4:43648937-43648956 None:intergenic 20.0%
!!! CTACAATAAACGTTTTATAA+TGG + chr1_4:43648953-43648972 None:intergenic 20.0%
!! ATATTGCATATTATATGTAG+CGG - chr1_4:43649205-43649224 Msa0164360:intron 20.0%
!!! ATCATTTGTTTTTTCCTTTA+TGG + chr1_4:43649564-43649583 None:intergenic 20.0%
!!! GTTCTTTAAGAAAAATCAAA+AGG + chr1_4:43650019-43650038 None:intergenic 20.0%
!! TTGATTAATGGAAATAAGTA+CGG - chr1_4:43650287-43650306 Msa0164360:intron 20.0%
!! TTTGATATTTCGATAAATTG+GGG - chr1_4:43650654-43650673 Msa0164360:CDS 20.0%
!! ATTAATTACACATGAAAAGA+GGG + chr1_4:43651003-43651022 None:intergenic 20.0%
!!! TTTTGTATTAAAGATGTTTC+AGG + chr1_4:43651272-43651291 None:intergenic 20.0%
!! ACATCTTTAATACAAAATGT+TGG - chr1_4:43651275-43651294 Msa0164360:intron 20.0%
!!! ATTTTATGATCAAAATGCAA+TGG - chr1_4:43651318-43651337 Msa0164360:intron 20.0%
!!! CTTTTGATAAAAAATTTCAC+GGG - chr1_4:43651716-43651735 Msa0164360:intron 20.0%
!!! TCTTTTCTGTAACATTTTTT+TGG - chr1_4:43652550-43652569 Msa0164360:intron 20.0%
!!! ATAGTTTTAATCACAAATGA+TGG + chr1_4:43652706-43652725 None:intergenic 20.0%
!! TTAAAACTATGAAATTGACA+TGG - chr1_4:43652716-43652735 Msa0164360:intron 20.0%
!! AATTGAAGTTCAAAACAATT+GGG - chr1_4:43653271-43653290 Msa0164360:intron 20.0%
!!! TGTATTTTAAACAACTCTTT+CGG + chr1_4:43653912-43653931 None:intergenic 20.0%
!! GAGATCATATAATATATGTA+AGG - chr1_4:43654387-43654406 Msa0164360:intron 20.0%
!!! TTACAATGTTCTTTTTTTTC+CGG - chr1_4:43655187-43655206 Msa0164360:intron 20.0%
!! TTGATGAATGAATATAAGTA+CGG - chr1_4:43656047-43656066 Msa0164360:intron 20.0%
!! GTCTATTAATTTATTTCAAG+TGG + chr1_4:43656157-43656176 None:intergenic 20.0%
!! TTTATAGGGTAAAATAAATG+TGG + chr1_4:43656853-43656872 None:intergenic 20.0%
!! TTGTATTTACAATGTATGTT+TGG + chr1_4:43657113-43657132 None:intergenic 20.0%
!!! TGATTTCACTTTTATGTTTA+AGG - chr1_4:43657730-43657749 Msa0164360:intron 20.0%
!!! GGTTGGTTAAAATATATTTT+TGG - chr1_4:43657771-43657790 Msa0164360:intron 20.0%
!! AGATAAGATAGAATAAGATA+AGG + chr1_4:43657899-43657918 None:intergenic 20.0%
!!! TAGAAATTCTAAGATTGTTA+AGG + chr1_4:43657926-43657945 None:intergenic 20.0%
! TAAATCTGTTCCTATTCATT+AGG - chr1_4:43641793-43641812 Msa0164360:three_prime_UTR 25.0%
! CGTAAAATAACCTAATGAAT+AGG + chr1_4:43641806-43641825 None:intergenic 25.0%
! GATCATGATTATTCTCATAT+AGG - chr1_4:43641961-43641980 Msa0164360:three_prime_UTR 25.0%
! AAATATTATCTTCCTTGGAT+CGG + chr1_4:43642085-43642104 None:intergenic 25.0%
!! GATAATATTTGCTGCAAAAA+TGG - chr1_4:43642095-43642114 Msa0164360:three_prime_UTR 25.0%
!! GTTCTTTGAGAAAAATCAAA+AGG + chr1_4:43642143-43642162 None:intergenic 25.0%
!! AGATTTGAAATTAGAACTGT+TGG - chr1_4:43642332-43642351 Msa0164360:three_prime_UTR 25.0%
! TAAATAATCATTCACCGAAA+TGG + chr1_4:43642371-43642390 None:intergenic 25.0%
! TAATTACCCACAAATTTGAA+CGG + chr1_4:43642905-43642924 None:intergenic 25.0%
!! TTATATTGAAGAAGGGTTTT+GGG + chr1_4:43643258-43643277 None:intergenic 25.0%
! TTAGAAGGAATAAAGTACAT+TGG + chr1_4:43643350-43643369 None:intergenic 25.0%
! AAAAAAAAGGAGCAATTAGA+AGG + chr1_4:43643365-43643384 None:intergenic 25.0%
! AGAAATAAAGGATATTGGAA+GGG + chr1_4:43643504-43643523 None:intergenic 25.0%
! AAGAAATAAAGGATATTGGA+AGG + chr1_4:43643505-43643524 None:intergenic 25.0%
! ACACTTTCAAAAAAAGTCTT+AGG + chr1_4:43643593-43643612 None:intergenic 25.0%
!!! TAAGACTTTTTTTGAAAGTG+TGG - chr1_4:43643592-43643611 Msa0164360:intron 25.0%
!!! AATTTTGAGTTCCTTAAATG+AGG - chr1_4:43643718-43643737 Msa0164360:intron 25.0%
! TACAAAATCTTCCTCATTTA+AGG + chr1_4:43643732-43643751 None:intergenic 25.0%
! GAAAAAAAAAAAGGAACATG+TGG + chr1_4:43643782-43643801 None:intergenic 25.0%
! TTAAATAAGAACCATCTGAT+TGG + chr1_4:43643938-43643957 None:intergenic 25.0%
!!! AGTCATATGTACGTTTTTTT+TGG - chr1_4:43643973-43643992 Msa0164360:three_prime_UTR 25.0%
!!! TAAGCATAAGTACTTTTTTG+AGG - chr1_4:43644258-43644277 Msa0164360:three_prime_UTR 25.0%
!! AATTTGAAACATACATGACA+TGG - chr1_4:43644290-43644309 Msa0164360:intron 25.0%
!!! TATTCATAAGGCTTTAAAGT+TGG + chr1_4:43644630-43644649 None:intergenic 25.0%
!!! ACTTTAAAGCCTTATGAATA+TGG - chr1_4:43644630-43644649 Msa0164360:intron 25.0%
!!! CTTTAAAGCCTTATGAATAT+GGG - chr1_4:43644631-43644650 Msa0164360:intron 25.0%
! AATGAGCAAAAATCTACTTA+TGG + chr1_4:43644730-43644749 None:intergenic 25.0%
! ATATCTGCATATATCCTATT+TGG - chr1_4:43644781-43644800 Msa0164360:intron 25.0%
! TATCTGCATATATCCTATTT+GGG - chr1_4:43644782-43644801 Msa0164360:intron 25.0%
! AAGATTATACAAATCTTCTC+CGG + chr1_4:43644808-43644827 None:intergenic 25.0%
! TAGTATGAAATTACAGTGAA+TGG - chr1_4:43644893-43644912 Msa0164360:three_prime_UTR 25.0%
!!! ACTTTGTTGAACTTGTTTTT+AGG - chr1_4:43644924-43644943 Msa0164360:three_prime_UTR 25.0%
!!! CTTTGTTGAACTTGTTTTTA+GGG - chr1_4:43644925-43644944 Msa0164360:three_prime_UTR 25.0%
!!! TTTGTTGAACTTGTTTTTAG+GGG - chr1_4:43644926-43644945 Msa0164360:three_prime_UTR 25.0%
! TATGACATGAGCTATTAAAA+TGG + chr1_4:43645107-43645126 None:intergenic 25.0%
! ACTATACAATTACAAACACA+TGG + chr1_4:43645136-43645155 None:intergenic 25.0%
! TGTGTTTGTAATTGTATAGT+TGG - chr1_4:43645136-43645155 Msa0164360:intron 25.0%
! GTGTTTGTAATTGTATAGTT+GGG - chr1_4:43645137-43645156 Msa0164360:intron 25.0%
! ACAAAATGCTTAAATATCCA+TGG - chr1_4:43645192-43645211 Msa0164360:intron 25.0%
!! TTTGAAATGACATTTGGTTA+TGG + chr1_4:43645540-43645559 None:intergenic 25.0%
!!! TCTACTTTTGAAATGACATT+TGG + chr1_4:43645546-43645565 None:intergenic 25.0%
!!! TTTTGATTGAATTTGTAGCA+AGG - chr1_4:43646132-43646151 Msa0164360:intron 25.0%
! CAAAACTTTATGGAAATTTC+TGG + chr1_4:43646341-43646360 None:intergenic 25.0%
!!! GTTTTAAAAATGATCACAAG+TGG - chr1_4:43646409-43646428 Msa0164360:intron 25.0%
! GAGAAAACATAAATTTCACA+TGG - chr1_4:43646556-43646575 Msa0164360:intron 25.0%
! GAAAACATAAATTTCACATG+GGG - chr1_4:43646558-43646577 Msa0164360:intron 25.0%
! AAAACATAAATTTCACATGG+GGG - chr1_4:43646559-43646578 Msa0164360:intron 25.0%
! CTAAAAGAATAACTAGGTAA+AGG + chr1_4:43646901-43646920 None:intergenic 25.0%
! TGATAGTTAAAAAAGTGGAA+AGG + chr1_4:43646975-43646994 None:intergenic 25.0%
!!! ATCGTTGATAGTTAAAAAAG+TGG + chr1_4:43646980-43646999 None:intergenic 25.0%
! CCAAAAATTGATAAATTAGG+GGG + chr1_4:43647041-43647060 None:intergenic 25.0%
! TCATAGATTGCAATAATAGA+AGG + chr1_4:43647097-43647116 None:intergenic 25.0%
!!! ATGTTCCTTAATTTTGAGAT+TGG + chr1_4:43647128-43647147 None:intergenic 25.0%
!!! TCATTGTTTTGGTTTTTCTA+AGG + chr1_4:43647620-43647639 None:intergenic 25.0%
! AAACCAATTAAAGTAGTTGT+TGG - chr1_4:43647679-43647698 Msa0164360:intron 25.0%
! ATTTCCCATAAACAATGTTA+TGG - chr1_4:43647809-43647828 Msa0164360:intron 25.0%
! TGGTTATATATTTAGGGAAT+TGG + chr1_4:43648144-43648163 None:intergenic 25.0%
! TGCAAACTTTCAAATATTTG+GGG - chr1_4:43648185-43648204 Msa0164360:intron 25.0%
!! TTGTATTTTCGTAGTTAATC+AGG - chr1_4:43648234-43648253 Msa0164360:intron 25.0%
!! TGTATTTTCGTAGTTAATCA+GGG - chr1_4:43648235-43648254 Msa0164360:intron 25.0%
!! TGGTACTTTCATATTTTATG+GGG + chr1_4:43648308-43648327 None:intergenic 25.0%
! TTAACACAAGAGAAATGAAT+TGG + chr1_4:43648328-43648347 None:intergenic 25.0%
! TTTCTTCTTCAATCATGAAA+TGG + chr1_4:43648361-43648380 None:intergenic 25.0%
! ATCACTCATTCTTCTTTAAT+TGG + chr1_4:43648387-43648406 None:intergenic 25.0%
!! ATCCATAATTTACTGAGTTT+TGG - chr1_4:43648407-43648426 Msa0164360:intron 25.0%
! ATCCAAAACTCAGTAAATTA+TGG + chr1_4:43648412-43648431 None:intergenic 25.0%
!!! GACAACTTTTTAGGTTAATT+TGG + chr1_4:43648448-43648467 None:intergenic 25.0%
! TTCAAATGTCATACAATGAA+TGG + chr1_4:43648508-43648527 None:intergenic 25.0%
!!! AATCCAGTCATGATTTTAAT+TGG - chr1_4:43648537-43648556 Msa0164360:intron 25.0%
! TTTCCAATTAAAATCATGAC+TGG + chr1_4:43648543-43648562 None:intergenic 25.0%
!!! ACTTTTAAAGGAATGAATGT+TGG + chr1_4:43648890-43648909 None:intergenic 25.0%
!!! TAGTCTAGTGATTTTGTTTT+TGG + chr1_4:43649077-43649096 None:intergenic 25.0%
! AAAACAAAATCACTAGACTA+CGG - chr1_4:43649077-43649096 Msa0164360:CDS 25.0%
! TATTGCATATTATATGTAGC+GGG - chr1_4:43649206-43649225 Msa0164360:intron 25.0%
! TGCATAATATATGCAAAGTT+CGG + chr1_4:43649331-43649350 None:intergenic 25.0%
!! AATCTTCTTTTATATATGCG+CGG - chr1_4:43649604-43649623 Msa0164360:intron 25.0%
!!! TTGATTTTGTTTGTGAACAT+GGG + chr1_4:43649683-43649702 None:intergenic 25.0%
!!! ATTGATTTTGTTTGTGAACA+TGG + chr1_4:43649684-43649703 None:intergenic 25.0%
! ACAAATAAAGCAAACAATCA+TGG - chr1_4:43649731-43649750 Msa0164360:intron 25.0%
! TTATACTTTAGCTGAGAAAA+AGG - chr1_4:43649785-43649804 Msa0164360:intron 25.0%
!!! ATCATTTTTGCTGCTAAAAT+GGG - chr1_4:43649972-43649991 Msa0164360:intron 25.0%
! AAAAATCAAAAGGGAGATAA+GGG + chr1_4:43642133-43642152 None:intergenic 25.0%
! TAAGTTAAAATCCAGTCAAA+TGG + chr1_4:43650258-43650277 None:intergenic 25.0%
! AGATAGATAGTACAAAGAAA+AGG - chr1_4:43650338-43650357 Msa0164360:intron 25.0%
! TTGATATTTCGATAAATTGG+GGG - chr1_4:43650655-43650674 Msa0164360:CDS 25.0%
! AATTATTTGATTAAGTGGGT+CGG - chr1_4:43650740-43650759 Msa0164360:CDS 25.0%
! AATGTTGTGTTTACAACAAT+TGG - chr1_4:43650931-43650950 Msa0164360:intron 25.0%
! GATTAATTACACATGAAAAG+AGG + chr1_4:43651004-43651023 None:intergenic 25.0%
! AAAACCACTAAAGTAGTATT+AGG + chr1_4:43651074-43651093 None:intergenic 25.0%
! AAGTATATAGAAAAAGACAC+AGG - chr1_4:43651163-43651182 Msa0164360:intron 25.0%
! ATTATCAGTACATTCATTGT+TGG - chr1_4:43651467-43651486 Msa0164360:intron 25.0%
! AATAAGTAATCAAGAACACA+CGG + chr1_4:43651550-43651569 None:intergenic 25.0%
! GATTACTTATTGCTACATTA+CGG - chr1_4:43651559-43651578 Msa0164360:intron 25.0%
! GTTACTATTACATTTAGTGT+AGG - chr1_4:43651844-43651863 Msa0164360:intron 25.0%
! ATTTGCGGATACATAAAAAA+TGG + chr1_4:43651939-43651958 None:intergenic 25.0%
! TTAGTAGTTTATGGTATTTG+CGG + chr1_4:43651954-43651973 None:intergenic 25.0%
! TCTTGTATTCTACACAATTA+AGG + chr1_4:43652169-43652188 None:intergenic 25.0%
! TAATTGTGTAGAATACAAGA+AGG - chr1_4:43652169-43652188 Msa0164360:intron 25.0%
! AAGAATTATGTCAAAGTAAG+CGG - chr1_4:43645215-43645234 Msa0164360:intron 25.0%
! ATGACACACTAAAAATATAC+AGG + chr1_4:43652606-43652625 None:intergenic 25.0%
! TGGAAACAAAGTAAAAAAGA+TGG - chr1_4:43653016-43653035 Msa0164360:intron 25.0%
! CAATTGAAGTTCAAAACAAT+TGG - chr1_4:43653270-43653289 Msa0164360:intron 25.0%
!!! TTCTTTTGATTGAACATTGA+AGG - chr1_4:43654003-43654022 Msa0164360:intron 25.0%
! AATTACTTCCAAAAAGTAAC+AGG + chr1_4:43654044-43654063 None:intergenic 25.0%
!! GTGCAATTTTTCTTATAACA+GGG + chr1_4:43654199-43654218 None:intergenic 25.0%
!! AGTGCAATTTTTCTTATAAC+AGG + chr1_4:43654200-43654219 None:intergenic 25.0%
! CCATTGAAAACTTATATACT+TGG + chr1_4:43654255-43654274 None:intergenic 25.0%
!! CCAAGTATATAAGTTTTCAA+TGG - chr1_4:43654252-43654271 Msa0164360:intron 25.0%
!!! ACTTTTTTATTCTAACCTCT+AGG - chr1_4:43654317-43654336 Msa0164360:intron 25.0%
!!! CTTTTTTATTCTAACCTCTA+GGG - chr1_4:43654318-43654337 Msa0164360:intron 25.0%
!! AATATATTTTACTACCCTAG+AGG + chr1_4:43654335-43654354 None:intergenic 25.0%
! TATATCTATCTTATGGACAT+TGG + chr1_4:43654811-43654830 None:intergenic 25.0%
!!! ACATCACATGTATTGTTTTT+TGG - chr1_4:43654919-43654938 Msa0164360:intron 25.0%
!!! GTCGTTTGTTTTTTTCATTA+CGG + chr1_4:43655149-43655168 None:intergenic 25.0%
! ATGAAAAAAACAAACGACTA+CGG - chr1_4:43655151-43655170 Msa0164360:intron 25.0%
! ACGAACAAAGTAATCAATTA+TGG - chr1_4:43655389-43655408 Msa0164360:intron 25.0%
!!! ATCATTTTTGCTGCTAAAAT+GGG - chr1_4:43649972-43649991 Msa0164360:intron 25.0%
!! TTCTTTGAGGAAAATCAAAA+GGG + chr1_4:43655673-43655692 None:intergenic 25.0%
!! ATCAAGTGGATATTTTGTAA+TGG + chr1_4:43655824-43655843 None:intergenic 25.0%
! GATAAAAATGCAATGGAATT+TGG - chr1_4:43656239-43656258 Msa0164360:intron 25.0%
! ATTATCAGTACATTCATTGT+TGG - chr1_4:43651467-43651486 Msa0164360:intron 25.0%
!!! TATTCATAAGGCTTTAAAGT+TGG + chr1_4:43644630-43644649 None:intergenic 25.0%
!!! ACTTTAAAGCCTTATGAATA+TGG - chr1_4:43644630-43644649 Msa0164360:intron 25.0%
!!! CTTTAAAGCCTTATGAATAT+GGG - chr1_4:43644631-43644650 Msa0164360:intron 25.0%
! CTTGTGGTAAAAAATTTCAT+GGG - chr1_4:43656630-43656649 Msa0164360:intron 25.0%
!! TCTAACATCACTCTTTTATA+GGG + chr1_4:43656867-43656886 None:intergenic 25.0%
! AAAGTCATGATGTAAAATCA+CGG + chr1_4:43657072-43657091 None:intergenic 25.0%
! TCAATAAAATCCATTTGGAT+TGG + chr1_4:43657202-43657221 None:intergenic 25.0%
! GAAAATAAGTTCAACAAAGT+TGG + chr1_4:43657225-43657244 None:intergenic 25.0%
!!! ACTTTGTTGAACTTATTTTC+AGG - chr1_4:43657225-43657244 Msa0164360:intron 25.0%
!!! CTTTGTTGAACTTATTTTCA+GGG - chr1_4:43657226-43657245 Msa0164360:intron 25.0%
!!! TTTGTTGAACTTATTTTCAG+GGG - chr1_4:43657227-43657246 Msa0164360:intron 25.0%
! AAGAATTATGTGAAAGTAAG+CGG - chr1_4:43657533-43657552 Msa0164360:intron 25.0%
! TAAGATAGAATAAGATAAGG+AGG + chr1_4:43657896-43657915 None:intergenic 25.0%
!! AAACTTTCTTTTTGATGCAT+AGG - chr1_4:43657945-43657964 Msa0164360:intron 25.0%
!!! GATCTTTTGTTGTAATTCTT+CGG + chr1_4:43653087-43653106 None:intergenic 25.0%
! AATTGAAGTTCAAAACAACT+GGG - chr1_4:43658299-43658318 Msa0164360:intron 25.0%
!! TTTCAAGAACATGTTTTCAT+TGG + chr1_4:43658379-43658398 None:intergenic 25.0%
!!! TTTTGATTGAATTTGTAGCA+AGG - chr1_4:43646132-43646151 Msa0164360:intron 25.0%
! CTATTATTCTATCAAGAACT+TGG + chr1_4:43658689-43658708 None:intergenic 25.0%
! CAAGTTCTTGATAGAATAAT+AGG - chr1_4:43658687-43658706 Msa0164360:intron 25.0%
!!! ATCCAGAAATTTTAACTAGT+GGG - chr1_4:43658731-43658750 Msa0164360:five_prime_UTR 25.0%
TACCAATATTATCGGAACAT+CGG + chr1_4:43641775-43641794 None:intergenic 30.0%
AAGTGATGAACATGTATACA+AGG + chr1_4:43641856-43641875 None:intergenic 30.0%
ATAATCATGATCAACCTTGA+CGG + chr1_4:43641953-43641972 None:intergenic 30.0%
TTGTTTGAATGAAGAACAAG+TGG - chr1_4:43641987-43642006 Msa0164360:three_prime_UTR 30.0%
GAATTCAAAGACTACTACAA+CGG + chr1_4:43642211-43642230 None:intergenic 30.0%
GTAGTCTTTGAATTCAGTAT+AGG - chr1_4:43642216-43642235 Msa0164360:three_prime_UTR 30.0%
!! ATCTTTTTGTTGTGAAAGTG+CGG + chr1_4:43642622-43642641 None:intergenic 30.0%
AATTACCCACAAATTTGAAC+GGG + chr1_4:43642904-43642923 None:intergenic 30.0%
! TATATTGAAGAAGGGTTTTG+GGG + chr1_4:43643257-43643276 None:intergenic 30.0%
! GTTATATTGAAGAAGGGTTT+TGG + chr1_4:43643259-43643278 None:intergenic 30.0%
GGAATAAAGTACATTGGAAT+GGG + chr1_4:43643344-43643363 None:intergenic 30.0%
AGGAATAAAGTACATTGGAA+TGG + chr1_4:43643345-43643364 None:intergenic 30.0%
ACACTTTCAAACAAAGTCTT+AGG + chr1_4:43643437-43643456 None:intergenic 30.0%
GAAATAAAGGATATTGGAAG+GGG + chr1_4:43643503-43643522 None:intergenic 30.0%
GTGGAAGAAATAAAGGATAT+TGG + chr1_4:43643509-43643528 None:intergenic 30.0%
!!! ACTTTTTTTGAAAGTGTGGA+TGG - chr1_4:43643596-43643615 Msa0164360:intron 30.0%
!!! CATATGTACGTTTTTTTTGG+TGG - chr1_4:43643976-43643995 Msa0164360:three_prime_UTR 30.0%
GACAATGCATAAAATATGCA+AGG + chr1_4:43644021-43644040 None:intergenic 30.0%
AAGTACTTATGCTTAAGCAA+TGG + chr1_4:43644253-43644272 None:intergenic 30.0%
TTGAAAACATTGAAGATCTG+AGG + chr1_4:43644404-43644423 None:intergenic 30.0%
! AAAATGCAATGGAATTTTGC+AGG - chr1_4:43644438-43644457 Msa0164360:intron 30.0%
! AAATGCAATGGAATTTTGCA+GGG - chr1_4:43644439-43644458 Msa0164360:intron 30.0%
ATTGTCACTACATTCATTGT+TGG - chr1_4:43644576-43644595 Msa0164360:intron 30.0%
AATAAGTGATCAAGAACACA+CGG + chr1_4:43644659-43644678 None:intergenic 30.0%
! ATTTTGTATTTACCATGAGG+TGG + chr1_4:43645179-43645198 None:intergenic 30.0%
! AGCATTTTGTATTTACCATG+AGG + chr1_4:43645182-43645201 None:intergenic 30.0%
ACTTTGACATAATTCTTCCA+TGG + chr1_4:43645212-43645231 None:intergenic 30.0%
GAATTATGTCAAAGTAAGTG+AGG - chr1_4:43645217-43645236 Msa0164360:intron 30.0%
!! ATGCATACTTTCTGAAATTC+AGG - chr1_4:43645280-43645299 Msa0164360:intron 30.0%
!! CCAAAAAAGTGTTACAGAAA+AGG + chr1_4:43645315-43645334 None:intergenic 30.0%
!! CCTTTTCTGTAACACTTTTT+TGG - chr1_4:43645312-43645331 Msa0164360:intron 30.0%
GATCTTTAGTTGCAATTCTT+CGG + chr1_4:43645745-43645764 None:intergenic 30.0%
TGTTTACTACAAAGCAAAAG+AGG - chr1_4:43646052-43646071 Msa0164360:intron 30.0%
! AGTGGATTCATTTGAAGAAT+TGG - chr1_4:43646166-43646185 Msa0164360:intron 30.0%
GTGGATTCATTTGAAGAATT+GGG - chr1_4:43646167-43646186 Msa0164360:intron 30.0%
CTTCATCATGTAACTTCAAA+TGG - chr1_4:43646374-43646393 Msa0164360:intron 30.0%
AACTTGATTCAATAGTAGTG+CGG + chr1_4:43646722-43646741 None:intergenic 30.0%
AGTTAAAAAAGTGGAAAGGT+GGG + chr1_4:43646971-43646990 None:intergenic 30.0%
TAGTTAAAAAAGTGGAAAGG+TGG + chr1_4:43646972-43646991 None:intergenic 30.0%
! CCCCCTAATTTATCAATTTT+TGG - chr1_4:43647038-43647057 Msa0164360:CDS 30.0%
TGGATCCAATCTCAAAATTA+AGG - chr1_4:43647120-43647139 Msa0164360:CDS 30.0%
TCTCAAAATTAAGGAACATG+TGG - chr1_4:43647129-43647148 Msa0164360:CDS 30.0%
GTTACAAACGTGAAACTTAA+AGG + chr1_4:43647464-43647483 None:intergenic 30.0%
! ATAGGTCCTTTAAGTTTCAA+AGG - chr1_4:43647486-43647505 Msa0164360:CDS 30.0%
!! CTGTAACCTTTGAAACTTAA+AGG + chr1_4:43647495-43647514 None:intergenic 30.0%
AAGTTTCAAAGGTTACAGAT+AGG - chr1_4:43647497-43647516 Msa0164360:CDS 30.0%
! ATAGGTCCTTTAAGTTTCTA+AGG - chr1_4:43647515-43647534 Msa0164360:CDS 30.0%
CTGAAACCTTAGAAACTTAA+AGG + chr1_4:43647524-43647543 None:intergenic 30.0%
!! AAGTTTCTAAGGTTTCAGAT+AGG - chr1_4:43647526-43647545 Msa0164360:CDS 30.0%
GAAACAAACTCGAAACTTAA+AGG + chr1_4:43647553-43647572 None:intergenic 30.0%
!!! GTTTTTCTAAGGTTTCAGAT+AGG + chr1_4:43647609-43647628 None:intergenic 30.0%
AGAAAAACCAAAACAATGAG+TGG - chr1_4:43647621-43647640 Msa0164360:intron 30.0%
GTTCATCATCATATATACAG+GGG + chr1_4:43647852-43647871 None:intergenic 30.0%
CGTTCATCATCATATATACA+GGG + chr1_4:43647853-43647872 None:intergenic 30.0%
TCGTTCATCATCATATATAC+AGG + chr1_4:43647854-43647873 None:intergenic 30.0%
TTGGTTTCTCACATGAAATA+TGG - chr1_4:43647910-43647929 Msa0164360:intron 30.0%
!!! GAGGGTAGTTTTTTTTGTTA+GGG + chr1_4:43647949-43647968 None:intergenic 30.0%
!!! AGAGGGTAGTTTTTTTTGTT+AGG + chr1_4:43647950-43647969 None:intergenic 30.0%
! TATACTTTCCTATTTTGTGG+AGG - chr1_4:43647996-43648015 Msa0164360:intron 30.0%
GCAAACTTTCAAATATTTGG+GGG - chr1_4:43648186-43648205 Msa0164360:intron 30.0%
! GGTACTTTCATATTTTATGG+GGG + chr1_4:43648307-43648326 None:intergenic 30.0%
GTAAATATATGTGACCATGA+AGG - chr1_4:43648688-43648707 Msa0164360:intron 30.0%
!!! ATTTTTTTTAAGGGGGATGT+TGG + chr1_4:43648930-43648949 None:intergenic 30.0%
CGTTTATTGTAGTTGTTGAT+TGG - chr1_4:43648961-43648980 Msa0164360:CDS 30.0%
TTGATTGGATCACTAGATTA+CGG - chr1_4:43648976-43648995 Msa0164360:CDS 30.0%
CGTTTAAATATGAAGAAGTG+AGG + chr1_4:43649253-43649272 None:intergenic 30.0%
GCATAATATATGCAAAGTTC+GGG + chr1_4:43649330-43649349 None:intergenic 30.0%
!! GATCATTTTTGCTGCTAAAA+TGG - chr1_4:43649971-43649990 Msa0164360:intron 30.0%
GAAAAATCAAAAGGGAGATA+AGG + chr1_4:43642134-43642153 None:intergenic 30.0%
AATTGCAAACAACGTGTTAT+TGG + chr1_4:43650140-43650159 None:intergenic 30.0%
! ACGTTGTTTGCAATTTTCAT+TGG - chr1_4:43650145-43650164 Msa0164360:intron 30.0%
CAAACACATAATTGACAGTA+CGG + chr1_4:43650202-43650221 None:intergenic 30.0%
TAAGTACGGTATTGTTTGAT+AGG - chr1_4:43650301-43650320 Msa0164360:intron 30.0%
AAGTACGGTATTGTTTGATA+GGG - chr1_4:43650302-43650321 Msa0164360:intron 30.0%
GATAAATTGGGGGAAAAATT+TGG - chr1_4:43650665-43650684 Msa0164360:CDS 30.0%
AATTCGTCCTTGAATTTACA+CGG + chr1_4:43650696-43650715 None:intergenic 30.0%
ATTATTTGATTAAGTGGGTC+GGG - chr1_4:43650741-43650760 Msa0164360:CDS 30.0%
TGTTGTAAACACAACATTCA+TGG + chr1_4:43650929-43650948 None:intergenic 30.0%
ATAGCCTAATACTACTTTAG+TGG - chr1_4:43651067-43651086 Msa0164360:intron 30.0%
AATTACTTATGCAGAAGCAA+TGG + chr1_4:43651122-43651141 None:intergenic 30.0%
! AAAATGCAATGGAATTTTGC+AGG - chr1_4:43644438-43644457 Msa0164360:intron 30.0%
! AAATGCAATGGAATTTTGCA+GGG - chr1_4:43644439-43644458 Msa0164360:intron 30.0%
ATTCATAAGGCTTCAAAGTT+GGG + chr1_4:43651520-43651539 None:intergenic 30.0%
TATTCATAAGGCTTCAAAGT+TGG + chr1_4:43651521-43651540 None:intergenic 30.0%
!! ACTTTGAAGCCTTATGAATA+TGG - chr1_4:43651521-43651540 Msa0164360:intron 30.0%
!! CTTTGAAGCCTTATGAATAT+GGG - chr1_4:43651522-43651541 Msa0164360:intron 30.0%
ATATCTGCATATATCCTATC+TGG - chr1_4:43651672-43651691 Msa0164360:intron 30.0%
TATCTGCATATATCCTATCT+GGG - chr1_4:43651673-43651692 Msa0164360:intron 30.0%
AGTACCATGTAATTGTTCAA+TGG - chr1_4:43651811-43651830 Msa0164360:intron 30.0%
ACATCCATTGAACAATTACA+TGG + chr1_4:43651818-43651837 None:intergenic 30.0%
TGTAATTGTTCAATGGATGT+AGG - chr1_4:43651818-43651837 Msa0164360:intron 30.0%
ACCATAAACTACTAAAGTTC+AGG - chr1_4:43651959-43651978 Msa0164360:intron 30.0%
ACCTGAACTTTAGTAGTTTA+TGG + chr1_4:43651963-43651982 None:intergenic 30.0%
AACGTTATTCTGCTAAATCA+CGG - chr1_4:43652053-43652072 Msa0164360:intron 30.0%
TCAATTCCATACATTTGGAT+TGG + chr1_4:43652079-43652098 None:intergenic 30.0%
GTTACTCAATTCCATACATT+TGG + chr1_4:43652084-43652103 None:intergenic 30.0%
! TTGCTGAACTTACATTTTCA+GGG - chr1_4:43652129-43652148 Msa0164360:intron 30.0%
TGTTGAATCTACAAGTAAAG+AGG - chr1_4:43652259-43652278 Msa0164360:intron 30.0%
ATGTGTTTGTGATTGTAGTT+GGG - chr1_4:43652365-43652384 Msa0164360:intron 30.0%
! ATTTTGTATTTACCATGAGG+TGG + chr1_4:43645179-43645198 None:intergenic 30.0%
! AGCATTTTGTATTTACCATG+AGG + chr1_4:43645182-43645201 None:intergenic 30.0%
ACAAAATGCTTAACTATCCA+TGG - chr1_4:43652420-43652439 Msa0164360:intron 30.0%
ACTTTGACATAATTCTTCCA+TGG + chr1_4:43645212-43645231 None:intergenic 30.0%
AGAATTATGTCAAAGTAAGC+GGG - chr1_4:43652444-43652463 Msa0164360:intron 30.0%
!! ATGCATACTTTCTGAAATTC+AGG - chr1_4:43645280-43645299 Msa0164360:intron 30.0%
TTTAATCACAAATGATGGCT+GGG + chr1_4:43652701-43652720 None:intergenic 30.0%
! TTTTAATCACAAATGATGGC+TGG + chr1_4:43652702-43652721 None:intergenic 30.0%
ATGGAATTATCCTAAAGCAT+TGG - chr1_4:43652735-43652754 Msa0164360:intron 30.0%
! TGGAATTATCCTAAAGCATT+GGG - chr1_4:43652736-43652755 Msa0164360:intron 30.0%
TAATATAGTCCCAATGCTTT+AGG + chr1_4:43652748-43652767 None:intergenic 30.0%
!! TTAGAAGTGTTGTCACAAAT+AGG - chr1_4:43652765-43652784 Msa0164360:intron 30.0%
!! TAGAAGTGTTGTCACAAATA+GGG - chr1_4:43652766-43652785 Msa0164360:intron 30.0%
TCATCATTACTTTCATCTCT+TGG + chr1_4:43653164-43653183 None:intergenic 30.0%
AGTAATGATGATCATCCTAA+AGG - chr1_4:43653173-43653192 Msa0164360:intron 30.0%
TATCTTCATCCATGTGAAAT+AGG + chr1_4:43653199-43653218 None:intergenic 30.0%
! TTTCACAAGCATGTTTTCAT+TGG + chr1_4:43653348-43653367 None:intergenic 30.0%
TTCTGATAGAATTTGTAGCA+AGG - chr1_4:43653480-43653499 Msa0164360:intron 30.0%
GTTTAACTACTTCAAATCCT+AGG - chr1_4:43653610-43653629 Msa0164360:intron 30.0%
!!! GTTTTAAAAATGATCCGAAG+TGG - chr1_4:43653756-43653775 Msa0164360:intron 30.0%
TTTGATTGAACATTGAAGGA+AGG - chr1_4:43654007-43654026 Msa0164360:intron 30.0%
!!! CAATTGTTCCTGTTACTTTT+TGG - chr1_4:43654033-43654052 Msa0164360:intron 30.0%
TTGATACATCGCAAAAAACA+CGG + chr1_4:43654141-43654160 None:intergenic 30.0%
AATTCTCCATTTATTCTGCT+TGG - chr1_4:43654428-43654447 Msa0164360:intron 30.0%
ATTCTCCATTTATTCTGCTT+GGG - chr1_4:43654429-43654448 Msa0164360:intron 30.0%
TGGGTGAATTTCTATTTGTT+AGG - chr1_4:43654448-43654467 Msa0164360:intron 30.0%
CCGAGAGAACATTTATTTAT+CGG + chr1_4:43654682-43654701 None:intergenic 30.0%
CCGATAAATAAATGTTCTCT+CGG - chr1_4:43654679-43654698 Msa0164360:intron 30.0%
!!! TTTTTTGGATACAGAACACA+TGG - chr1_4:43654934-43654953 Msa0164360:intron 30.0%
! TTTTCATTACGGAACTAAAG+TGG + chr1_4:43655138-43655157 None:intergenic 30.0%
TAGAGAAAGATATATGACTC+AGG + chr1_4:43655245-43655264 None:intergenic 30.0%
! AATTTGAGAAGTGTGTAGAA+AGG + chr1_4:43655282-43655301 None:intergenic 30.0%
! TTTTCTCAGCTAAAGTGTAA+CGG + chr1_4:43655443-43655462 None:intergenic 30.0%
TTACACTTTAGCTGAGAAAA+AGG - chr1_4:43655443-43655462 Msa0164360:intron 30.0%
GAAAAACTTCTATCCATGAA+GGG - chr1_4:43655465-43655484 Msa0164360:intron 30.0%
AGAACAAGATGAATCTAAGT+TGG - chr1_4:43655533-43655552 Msa0164360:intron 30.0%
!! GATCATTTTTGCTGCTAAAA+TGG - chr1_4:43649971-43649990 Msa0164360:intron 30.0%
! GTTCTTTGAGGAAAATCAAA+AGG + chr1_4:43655674-43655693 None:intergenic 30.0%
! CATTTTTGAATGGTTCTTTG+AGG + chr1_4:43655686-43655705 None:intergenic 30.0%
!! CGGCTAATATCATTTTTGAA+TGG + chr1_4:43655696-43655715 None:intergenic 30.0%
GTAGTCTTTGAATTCAGTAT+AGG - chr1_4:43642216-43642235 Msa0164360:three_prime_UTR 30.0%
TCTTTGAATTCAGTATAGGT+AGG - chr1_4:43642220-43642239 Msa0164360:three_prime_UTR 30.0%
TGTAACTAATGCATATCAAG+TGG + chr1_4:43655838-43655857 None:intergenic 30.0%
!! ACACTGATGTTTTAGATTGA+AGG - chr1_4:43655860-43655879 Msa0164360:intron 30.0%
TATTACAATTGTCGATGTGT+CGG - chr1_4:43655934-43655953 Msa0164360:intron 30.0%
TACGGTATAGTAGTTTGATA+GGG - chr1_4:43656065-43656084 Msa0164360:intron 30.0%
AATTCATGAGTCAATTTCTG+AGG - chr1_4:43656182-43656201 Msa0164360:intron 30.0%
!! TAAATTGAAAGCATTGAAGC+TGG + chr1_4:43656213-43656232 None:intergenic 30.0%
AATAAGTGATCAAGAACACA+CGG + chr1_4:43644659-43644678 None:intergenic 30.0%
GATCACTTATTGCTACATTA+CGG - chr1_4:43656473-43656492 Msa0164360:intron 30.0%
ATATCTGCATATATCCTATC+TGG - chr1_4:43651672-43651691 Msa0164360:intron 30.0%
TATCTGCATATATCCTATCT+GGG - chr1_4:43651673-43651692 Msa0164360:intron 30.0%
!!! CCATGAAATTTTTTACCACA+AGG + chr1_4:43656632-43656651 None:intergenic 30.0%
CCTTGTGGTAAAAAATTTCA+TGG - chr1_4:43656629-43656648 Msa0164360:intron 30.0%
GCAAATAAAATCTGATCATG+AGG + chr1_4:43656693-43656712 None:intergenic 30.0%
TATATTGGGTAAAACCAATG+CGG - chr1_4:43656786-43656805 Msa0164360:intron 30.0%
! CTCTAACATCACTCTTTTAT+AGG + chr1_4:43656868-43656887 None:intergenic 30.0%
! ATAAAATCCATTTGGATTGG+CGG + chr1_4:43657199-43657218 None:intergenic 30.0%
GTTGGTCAATAAAATCCATT+TGG + chr1_4:43657207-43657226 None:intergenic 30.0%
TAACTGTGTTGAATACAAGA+AGG - chr1_4:43657266-43657285 Msa0164360:intron 30.0%
! TGGTAAGTAAGAATTTTGGA+TGG + chr1_4:43657294-43657313 None:intergenic 30.0%
! TGCTTGGTAAGTAAGAATTT+TGG + chr1_4:43657298-43657317 None:intergenic 30.0%
ACAGAAGTCTTAAATATCCA+TGG - chr1_4:43657510-43657529 Msa0164360:intron 30.0%
ACTTTCACATAATTCTTCCA+TGG + chr1_4:43657530-43657549 None:intergenic 30.0%
AGAATTATGTGAAAGTAAGC+GGG - chr1_4:43657534-43657553 Msa0164360:intron 30.0%
!! ATGCATACTTTCTGAAATAC+AGG - chr1_4:43657598-43657617 Msa0164360:intron 30.0%
! TGAGAACAAAAACAGTGTTT+TGG + chr1_4:43657648-43657667 None:intergenic 30.0%
TAGAATAAGATAAGGAGGTT+CGG + chr1_4:43657891-43657910 None:intergenic 30.0%
GAAAATGATGATCTTCCAAA+AGG - chr1_4:43658201-43658220 Msa0164360:intron 30.0%
CAATTGAAGTTCAAAACAAC+TGG - chr1_4:43658298-43658317 Msa0164360:intron 30.0%
TGTTTACTACAAAGCAAAAG+AGG - chr1_4:43646052-43646071 Msa0164360:intron 30.0%
!! TACTACACTTTGTTGTTCAA+GGG + chr1_4:43658583-43658602 None:intergenic 30.0%
!! TTACTACACTTTGTTGTTCA+AGG + chr1_4:43658584-43658603 None:intergenic 30.0%
ATTGAAGCAGTTAAACAATC+TGG + chr1_4:43658625-43658644 None:intergenic 30.0%
!!! GATCCAGAAATTTTAACTAG+TGG - chr1_4:43658730-43658749 Msa0164360:five_prime_UTR 30.0%
!!! TCCAGAAATTTTAACTAGTG+GGG - chr1_4:43658732-43658751 Msa0164360:five_prime_UTR 30.0%
TTCCGATGTTCCGATAATAT+TGG - chr1_4:43641770-43641789 Msa0164360:three_prime_UTR 35.0%
GCTGCAAAGTTGGAAAATAA+CGG - chr1_4:43641898-43641917 Msa0164360:three_prime_UTR 35.0%
TAATCATGATCAACCTTGAC+GGG + chr1_4:43641952-43641971 None:intergenic 35.0%
! CATCAATGATGATGAAGTGT+CGG - chr1_4:43642013-43642032 Msa0164360:three_prime_UTR 35.0%
GCAGCAAATATTATCTTCCT+TGG + chr1_4:43642090-43642109 None:intergenic 35.0%
GAACCCTTCAACAAAGATAT+TGG - chr1_4:43642159-43642178 Msa0164360:three_prime_UTR 35.0%
CGACCAATATCTTTGTTGAA+GGG + chr1_4:43642165-43642184 None:intergenic 35.0%
ACGACCAATATCTTTGTTGA+AGG + chr1_4:43642166-43642185 None:intergenic 35.0%
ATATTGGTCGTAACTCTGTT+TGG - chr1_4:43642175-43642194 Msa0164360:three_prime_UTR 35.0%
TATTGGTCGTAACTCTGTTT+GGG - chr1_4:43642176-43642195 Msa0164360:three_prime_UTR 35.0%
!!! TTTTTTAAAACGCGGGTATG+GGG + chr1_4:43642503-43642522 None:intergenic 35.0%
!!! GTTTTTTAAAACGCGGGTAT+GGG + chr1_4:43642504-43642523 None:intergenic 35.0%
!!! AGTTTTTTAAAACGCGGGTA+TGG + chr1_4:43642505-43642524 None:intergenic 35.0%
!!! ATGGGGAGTTTTTTAAAACG+CGG + chr1_4:43642511-43642530 None:intergenic 35.0%
TTTAAAAAACTCCCCATACC+CGG - chr1_4:43642514-43642533 Msa0164360:three_prime_UTR 35.0%
!! TCTTTTTGTTGTGAAAGTGC+GGG + chr1_4:43642621-43642640 None:intergenic 35.0%
GCATGGTGTATATAATGTGT+GGG - chr1_4:43642834-43642853 Msa0164360:intron 35.0%
TGTATATAATGTGTGGGCAT+GGG - chr1_4:43642840-43642859 Msa0164360:intron 35.0%
AGCATTAGTCAACTAGCTAA+GGG + chr1_4:43643034-43643053 None:intergenic 35.0%
AAGCATTAGTCAACTAGCTA+AGG + chr1_4:43643035-43643054 None:intergenic 35.0%
TAGCTAGTTGACTAATGCTT+TGG - chr1_4:43643035-43643054 Msa0164360:three_prime_UTR 35.0%
TAGTTGACTAATGCTTTGGT+TGG - chr1_4:43643039-43643058 Msa0164360:three_prime_UTR 35.0%
TAATGCTTTGGTTGGAAGTT+TGG - chr1_4:43643047-43643066 Msa0164360:three_prime_UTR 35.0%
!!! GGAGTTTTGGAAGGTTTATA+TGG + chr1_4:43643236-43643255 None:intergenic 35.0%
!!! TTTTAGTTCGCCAAATGAGA+AGG - chr1_4:43643280-43643299 Msa0164360:three_prime_UTR 35.0%
! TTTAGTTCGCCAAATGAGAA+GGG - chr1_4:43643281-43643300 Msa0164360:three_prime_UTR 35.0%
AATAGAGAACCCTTCTCATT+TGG + chr1_4:43643293-43643312 None:intergenic 35.0%
AGAAGGGTTCTCTATTATGA+AGG - chr1_4:43643297-43643316 Msa0164360:intron 35.0%
!! TTAGGCTTTGTTTGCAAGTT+TGG + chr1_4:43643419-43643438 None:intergenic 35.0%
! ACTTTGTTTGAAAGTGTGCT+GGG - chr1_4:43643440-43643459 Msa0164360:intron 35.0%
GTAGCAAGTGGAAGAAATAA+AGG + chr1_4:43643516-43643535 None:intergenic 35.0%
!!! TTTTTTGAAAGTGTGGATGG+AGG - chr1_4:43643599-43643618 Msa0164360:intron 35.0%
! CTTTAAAGGGTGGAAAACTT+TGG - chr1_4:43643633-43643652 Msa0164360:intron 35.0%
AAGGAACATGTGGAAAAAAC+AGG + chr1_4:43643772-43643791 None:intergenic 35.0%
TTTGAGAGTTTGGATGGAAA+GGG + chr1_4:43643822-43643841 None:intergenic 35.0%
! ATGACCTTTGTTTGAGAGTT+TGG + chr1_4:43643832-43643851 None:intergenic 35.0%
GTCATATTTGAATTCAACCC+TGG - chr1_4:43643847-43643866 Msa0164360:intron 35.0%
CATAAAATATGCAAGGTCTG+GGG + chr1_4:43644014-43644033 None:intergenic 35.0%
GCATAAAATATGCAAGGTCT+GGG + chr1_4:43644015-43644034 None:intergenic 35.0%
TGCATAAAATATGCAAGGTC+TGG + chr1_4:43644016-43644035 None:intergenic 35.0%
!!! GCATAAGTACTTTTTTGAGG+TGG - chr1_4:43644261-43644280 Msa0164360:three_prime_UTR 35.0%
TGCTTGTTTATGTTAGACAC+CGG - chr1_4:43644359-43644378 Msa0164360:intron 35.0%
! AATGCAATGGAATTTTGCAG+GGG - chr1_4:43644440-43644459 Msa0164360:intron 35.0%
GATCACTTATTGCTACGTTA+CGG - chr1_4:43644668-43644687 Msa0164360:intron 35.0%
! AGATTTTTGCTCATTGCACT+TGG - chr1_4:43644735-43644754 Msa0164360:intron 35.0%
TGTTGAATCTACAAGTAACG+TGG - chr1_4:43645019-43645038 Msa0164360:three_prime_UTR 35.0%
TACAAGTAACGTGGAAACAT+TGG - chr1_4:43645028-43645047 Msa0164360:intron 35.0%
TGATGATCGAAAGTTAGAGA+CGG + chr1_4:43645073-43645092 None:intergenic 35.0%
! TTTTCCACAAAGAGCTTAAG+AGG - chr1_4:43645616-43645635 Msa0164360:intron 35.0%
TTTCCACAAAGAGCTTAAGA+GGG - chr1_4:43645617-43645636 Msa0164360:intron 35.0%
TATCTTCATCCATGTTAACG+AGG + chr1_4:43645857-43645876 None:intergenic 35.0%
! TTTCGCGAACATGTTTTCAT+TGG + chr1_4:43646012-43646031 None:intergenic 35.0%
AGCAAGGCTTCAAAATTTAG+TGG - chr1_4:43646148-43646167 Msa0164360:intron 35.0%
GTTTAACTGCTTTATATCCC+AGG - chr1_4:43646262-43646281 Msa0164360:intron 35.0%
TATATCCCAGGATTGACAAA+TGG - chr1_4:43646274-43646293 Msa0164360:intron 35.0%
ATACTCCATTTGTCAATCCT+GGG + chr1_4:43646282-43646301 None:intergenic 35.0%
GACAAATGGAGTATGAAAAG+AGG - chr1_4:43646288-43646307 Msa0164360:intron 35.0%
GAGGGTCCTTTATATAAATG+TGG - chr1_4:43646583-43646602 Msa0164360:intron 35.0%
!! AATGTGGTATAATGGACTCT+AGG - chr1_4:43646599-43646618 Msa0164360:intron 35.0%
ACGATGTTCCAATATATCTG+AGG - chr1_4:43646634-43646653 Msa0164360:intron 35.0%
CGATGTTCCAATATATCTGA+GGG - chr1_4:43646635-43646654 Msa0164360:intron 35.0%
TGTGATTCCCTCAGATATAT+TGG + chr1_4:43646645-43646664 None:intergenic 35.0%
AGTCATGTGATTGTCATTAG+AGG - chr1_4:43646667-43646686 Msa0164360:intron 35.0%
GTCATGTGATTGTCATTAGA+GGG - chr1_4:43646668-43646687 Msa0164360:intron 35.0%
TAGAGGGTCATATTTGATCA+CGG - chr1_4:43646684-43646703 Msa0164360:intron 35.0%
AGAAAAATTCAGCCCAACAT+GGG - chr1_4:43647389-43647408 Msa0164360:CDS 35.0%
GTTTCACGTTTGTAACAGAT+AGG - chr1_4:43647468-43647487 Msa0164360:CDS 35.0%
!! GTTTCGAGTTTGTTTCAGAT+AGG - chr1_4:43647557-43647576 Msa0164360:CDS 35.0%
! TATAGCACCACTCATTGTTT+TGG + chr1_4:43647631-43647650 None:intergenic 35.0%
TGTGGTTGTTTATTGTCCAT+TGG + chr1_4:43647744-43647763 None:intergenic 35.0%
AATAAACAACCACATACGCT+CGG - chr1_4:43647750-43647769 Msa0164360:intron 35.0%
GGGACCATAACATTGTTTAT+GGG + chr1_4:43647816-43647835 None:intergenic 35.0%
TACAGGGGATCATATATACA+GGG + chr1_4:43647837-43647856 None:intergenic 35.0%
ATACAGGGGATCATATATAC+AGG + chr1_4:43647838-43647857 None:intergenic 35.0%
TCTTAGGGTTCAACAAAAGA+GGG + chr1_4:43647967-43647986 None:intergenic 35.0%
TTCTTAGGGTTCAACAAAAG+AGG + chr1_4:43647968-43647987 None:intergenic 35.0%
ATTTGAGTCCTCCACAAAAT+AGG + chr1_4:43648007-43648026 None:intergenic 35.0%
!!! GTGATTTTGTTTTTGGTGTC+TGG + chr1_4:43649070-43649089 None:intergenic 35.0%
CCAACTGAGTTAAACTTATG+AGG + chr1_4:43649180-43649199 None:intergenic 35.0%
CCTCATAAGTTTAACTCAGT+TGG - chr1_4:43649177-43649196 Msa0164360:CDS 35.0%
!! TGTGATTAGCTTAGCTTAGT+TGG + chr1_4:43649362-43649381 None:intergenic 35.0%
GAAAGACTTCTATCCATGAA+GGG - chr1_4:43649807-43649826 Msa0164360:intron 35.0%
CATCATGGTTATTCTCGTAT+AGG - chr1_4:43649837-43649856 Msa0164360:intron 35.0%
GGTTATTCTCGTATAGGAAA+TGG - chr1_4:43649843-43649862 Msa0164360:intron 35.0%
GTCGTCTTTGAATTCAGTAT+AGG - chr1_4:43650086-43650105 Msa0164360:intron 35.0%
GGTATTGTTTGATAGGGTTA+GGG - chr1_4:43650308-43650327 Msa0164360:intron 35.0%
GTATTGTTTGATAGGGTTAG+GGG - chr1_4:43650309-43650328 Msa0164360:intron 35.0%
AAATTCGTCCTTGAATTTGC+AGG - chr1_4:43650377-43650396 Msa0164360:intron 35.0%
AATTCGTCCTTGAATTTGCA+GGG - chr1_4:43650378-43650397 Msa0164360:intron 35.0%
ATGGAAGGAATGAGTAAAAG+AGG - chr1_4:43650433-43650452 Msa0164360:intron 35.0%
TGGAAGGAATGAGTAAAAGA+GGG - chr1_4:43650434-43650453 Msa0164360:intron 35.0%
GAGTAAAAGAGGGGTAAAAT+TGG - chr1_4:43650444-43650463 Msa0164360:intron 35.0%
TTGTTGCGTTTCCATCAAAT+CGG - chr1_4:43650499-43650518 Msa0164360:CDS 35.0%
ATCACTACAGAGATATTGGA+TGG - chr1_4:43650591-43650610 Msa0164360:CDS 35.0%
! ATGGACGCTTGTTAAATTCA+GGG - chr1_4:43650626-43650645 Msa0164360:CDS 35.0%
! CAATTATGAGAAAGCGTGTT+TGG - chr1_4:43650777-43650796 Msa0164360:CDS 35.0%
AGTGTCAAAAGCAAAGCAAA+TGG + chr1_4:43650823-43650842 None:intergenic 35.0%
!!! TTTTGACACTTTTGACTTCC+TGG - chr1_4:43650833-43650852 Msa0164360:five_prime_UTR 35.0%
TGCATAACAATGTCATGTCT+CGG - chr1_4:43650899-43650918 Msa0164360:intron 35.0%
!!! ATTGGTTTTGCCATCCAAAA+AGG - chr1_4:43650949-43650968 Msa0164360:intron 35.0%
!! GATGTTTCAGGTGTTACTTA+CGG + chr1_4:43651260-43651279 None:intergenic 35.0%
! AATGCAATGGAATTTTGCAG+GGG - chr1_4:43644440-43644459 Msa0164360:intron 35.0%
TATTGCTACATTACGGTATC+TGG - chr1_4:43651566-43651585 Msa0164360:intron 35.0%
! AGATTTTTGCTCATTGCACT+TGG - chr1_4:43644735-43644754 Msa0164360:intron 35.0%
TGTAGGATAGCTACTGTAAT+AGG - chr1_4:43651861-43651880 Msa0164360:intron 35.0%
ACTACTAAAGTTCAGGTCTT+TGG - chr1_4:43651966-43651985 Msa0164360:intron 35.0%
! TAAAGTTCAGGTCTTTGGAA+TGG - chr1_4:43651971-43651990 Msa0164360:intron 35.0%
!! AAAGTTCAGGTCTTTGGAAT+GGG - chr1_4:43651972-43651991 Msa0164360:intron 35.0%
CTGAAAATGTAAGTTCAGCA+AGG + chr1_4:43652130-43652149 None:intergenic 35.0%
! CTTGCTGAACTTACATTTTC+AGG - chr1_4:43652128-43652147 Msa0164360:intron 35.0%
! TGCTGAACTTACATTTTCAG+GGG - chr1_4:43652130-43652149 Msa0164360:intron 35.0%
! TGGTAAGTCAGAATTTTGGA+TGG + chr1_4:43652197-43652216 None:intergenic 35.0%
! AGCTTGGTAAGTCAGAATTT+TGG + chr1_4:43652201-43652220 None:intergenic 35.0%
TACAAGTAAAGAGGACTCAT+TGG - chr1_4:43652268-43652287 Msa0164360:intron 35.0%
CAACTACAATCACAAACACA+TGG + chr1_4:43652366-43652385 None:intergenic 35.0%
CATGTGTTTGTGATTGTAGT+TGG - chr1_4:43652364-43652383 Msa0164360:intron 35.0%
GAATTATGTCAAAGTAAGCG+GGG - chr1_4:43652445-43652464 Msa0164360:intron 35.0%
! TCTAAGACATTGTGCATTCA+TGG - chr1_4:43652469-43652488 Msa0164360:intron 35.0%
!! AGAAGTGTTGTCACAAATAG+GGG - chr1_4:43652767-43652786 Msa0164360:intron 35.0%
GAGCTGTCTTCTTGATATAT+AGG - chr1_4:43652914-43652933 Msa0164360:intron 35.0%
! TTTTCCTCAATGAGCTTAAG+AGG - chr1_4:43652958-43652977 Msa0164360:intron 35.0%
TTTCCTCAATGAGCTTAAGA+GGG - chr1_4:43652959-43652978 Msa0164360:intron 35.0%
CATTACTTTCATCTCTTGGA+CGG + chr1_4:43653160-43653179 None:intergenic 35.0%
! ATGTTTTCATTGGCAATAGG+AGG + chr1_4:43653338-43653357 None:intergenic 35.0%
! AGCATGTTTTCATTGGCAAT+AGG + chr1_4:43653341-43653360 None:intergenic 35.0%
TGCTTGTGAAACAAATGTCT+TGG - chr1_4:43653357-43653376 Msa0164360:intron 35.0%
AGCAAGGCTTCAAAATTTAG+TGG - chr1_4:43646148-43646167 Msa0164360:intron 35.0%
! AGTGGACTCATTTGAAGAAT+TGG - chr1_4:43653514-43653533 Msa0164360:intron 35.0%
GTGGACTCATTTGAAGAATT+GGG - chr1_4:43653515-43653534 Msa0164360:intron 35.0%
CAAATCCTAGGATTGACAAA+TGG - chr1_4:43653622-43653641 Msa0164360:intron 35.0%
TATGATGCTCGAATCAATGA+GGG - chr1_4:43653862-43653881 Msa0164360:intron 35.0%
ACTCTTTCGGTAAATCCTAT+AGG + chr1_4:43653899-43653918 None:intergenic 35.0%
GGATTACGTGATACAATGAA+TGG + chr1_4:43653941-43653960 None:intergenic 35.0%
GGATCGTTGTGAACAAATTT+AGG + chr1_4:43654178-43654197 None:intergenic 35.0%
ATTCACCCAAGCAGAATAAA+TGG + chr1_4:43654437-43654456 None:intergenic 35.0%
GAATTGCTTAACATGTGCTT+TGG - chr1_4:43654639-43654658 Msa0164360:intron 35.0%
TGACTTTGACTACACTTGTA+CGG - chr1_4:43654884-43654903 Msa0164360:intron 35.0%
TGAGATTCTTGTCCTAAAGT+AGG + chr1_4:43654977-43654996 None:intergenic 35.0%
AAATGATGTCGACCATATCA+TGG - chr1_4:43655084-43655103 Msa0164360:intron 35.0%
! GTGACTAGTCATATGATATC+CGG + chr1_4:43655209-43655228 None:intergenic 35.0%
AAGATATATGACTCAGGACA+AGG + chr1_4:43655239-43655258 None:intergenic 35.0%
GGAAAAACTTCTATCCATGA+AGG - chr1_4:43655464-43655483 Msa0164360:intron 35.0%
CATCATGGTTATTCTCGTAT+AGG - chr1_4:43649837-43649856 Msa0164360:intron 35.0%
GGTTATTCTCGTATAGGAAT+TGG - chr1_4:43655501-43655520 Msa0164360:intron 35.0%
TTCTCGTATAGGAATTGGTT+TGG - chr1_4:43655506-43655525 Msa0164360:intron 35.0%
AACTCATTGCTGAAAAAGCA+TGG - chr1_4:43655577-43655596 Msa0164360:intron 35.0%
! ACTCATTGCTGAAAAAGCAT+GGG - chr1_4:43655578-43655597 Msa0164360:intron 35.0%
GTACGGTATAGTAGTTTGAT+AGG - chr1_4:43656064-43656083 Msa0164360:intron 35.0%
ACGGTATAGTAGTTTGATAG+GGG - chr1_4:43656066-43656085 Msa0164360:intron 35.0%
TTGAATAAGTGGGTCAGATT+TGG - chr1_4:43656128-43656147 Msa0164360:intron 35.0%
AAAATGCAATGGAATTTGGC+AGG - chr1_4:43656243-43656262 Msa0164360:intron 35.0%
AAATGCAATGGAATTTGGCA+GGG - chr1_4:43656244-43656263 Msa0164360:intron 35.0%
AAGGGGTTTAATAGAGGATT+AGG - chr1_4:43656279-43656298 Msa0164360:intron 35.0%
AGGGGTTTAATAGAGGATTA+GGG - chr1_4:43656280-43656299 Msa0164360:intron 35.0%
TATTGCTACATTACGGTATC+TGG - chr1_4:43651566-43651585 Msa0164360:intron 35.0%
! AGATTTTTGCTCATTGCACT+TGG - chr1_4:43644735-43644754 Msa0164360:intron 35.0%
GAACCACTCACTCTTATATT+GGG - chr1_4:43656772-43656791 Msa0164360:intron 35.0%
TTACCCAATATAAGAGTGAG+TGG + chr1_4:43656778-43656797 None:intergenic 35.0%
TAAATGTGGATTCCACACAT+TGG + chr1_4:43656839-43656858 None:intergenic 35.0%
AAAAGAGTGATGTTAGAGAG+AGG - chr1_4:43656870-43656889 Msa0164360:intron 35.0%
AAAGAGTGATGTTAGAGAGA+GGG - chr1_4:43656871-43656890 Msa0164360:intron 35.0%
TAAAATCACGGTAAGGCAAA+AGG + chr1_4:43657060-43657079 None:intergenic 35.0%
CATGATGTAAAATCACGGTA+AGG + chr1_4:43657067-43657086 None:intergenic 35.0%
TGTTGAATCTACAAGTAACG+AGG - chr1_4:43645019-43645038 Msa0164360:three_prime_UTR 35.0%
GAATTATGTGAAAGTAAGCG+GGG - chr1_4:43657535-43657554 Msa0164360:intron 35.0%
! TCTAAGACATTGCGCATTTA+TGG - chr1_4:43657559-43657578 Msa0164360:intron 35.0%
GTACTAAGTTGTATATGCTC+TGG + chr1_4:43657673-43657692 None:intergenic 35.0%
!! AGGAAGTGTCTTATATGAAG+TGG - chr1_4:43657750-43657769 Msa0164360:intron 35.0%
AGTGTCTTATATGAAGTGGT+TGG - chr1_4:43657754-43657773 Msa0164360:intron 35.0%
!! TGATGTCGATTCAATGATGT+GGG + chr1_4:43657857-43657876 None:intergenic 35.0%
!! TTGATGTCGATTCAATGATG+TGG + chr1_4:43657858-43657877 None:intergenic 35.0%
! TTTTTCGCAATGAGCTTAAG+AGG - chr1_4:43657989-43658008 Msa0164360:intron 35.0%
! TTTTCGCAATGAGCTTAAGA+GGG - chr1_4:43657990-43658009 Msa0164360:intron 35.0%
AGGAAACAAAGTCAAGAAGA+TGG - chr1_4:43658047-43658066 Msa0164360:intron 35.0%
AGAACTCTGAATTTACAAGG+AGG + chr1_4:43658155-43658174 None:intergenic 35.0%
TCCTTGTAAATTCAGAGTTC+TGG - chr1_4:43658154-43658173 Msa0164360:intron 35.0%
CCTTGTAAATTCAGAGTTCT+GGG - chr1_4:43658155-43658174 Msa0164360:intron 35.0%
!! AATTCAGAGTTCTGGGAAAT+CGG - chr1_4:43658162-43658181 Msa0164360:intron 35.0%
! AGATCATCATTTTCGTCTCT+AGG + chr1_4:43658195-43658214 None:intergenic 35.0%
TATCTTCATCCATGTGAAAG+AGG + chr1_4:43658227-43658246 None:intergenic 35.0%
! ATGTTTTCATTGGCGATAGA+AGG + chr1_4:43646002-43646021 None:intergenic 35.0%
TGTTCTTGAAACAAACGTCT+TGG - chr1_4:43658388-43658407 Msa0164360:intron 35.0%
TGTAGCAAGGCTTCAAAATT+TGG - chr1_4:43646145-43646164 Msa0164360:intron 35.0%
GTGGATGCATTTGAAGAATT+GGG - chr1_4:43658534-43658553 Msa0164360:intron 35.0%
!! ACTACACTTTGTTGTTCAAG+GGG + chr1_4:43658582-43658601 None:intergenic 35.0%
! TATCAAGAACTTGGCTTTCA+TGG + chr1_4:43658680-43658699 None:intergenic 35.0%
!!! CCAGAAATTTTAACTAGTGG+GGG - chr1_4:43658733-43658752 Msa0164360:five_prime_UTR 35.0%
TTCTCTCTCTTTGCTTAGCA+TGG - chr1_4:43641876-43641895 Msa0164360:three_prime_UTR 40.0%
AATCATGATCAACCTTGACG+GGG + chr1_4:43641951-43641970 None:intergenic 40.0%
AGCACGGTATAGTTTGATAG+AGG - chr1_4:43642393-43642412 Msa0164360:three_prime_UTR 40.0%
GGTATAGTTTGATAGAGGCA+GGG - chr1_4:43642398-43642417 Msa0164360:three_prime_UTR 40.0%
!!! TGGGGAGTTTTTTAAAACGC+GGG + chr1_4:43642510-43642529 None:intergenic 40.0%
TTAAAAAACTCCCCATACCC+GGG - chr1_4:43642515-43642534 Msa0164360:three_prime_UTR 40.0%
TTAGATACCCATAGGGTATG+GGG + chr1_4:43642576-43642595 None:intergenic 40.0%
CTTAGATACCCATAGGGTAT+GGG + chr1_4:43642577-43642596 None:intergenic 40.0%
ACTTAGATACCCATAGGGTA+TGG + chr1_4:43642578-43642597 None:intergenic 40.0%
CGCATGGTGTATATAATGTG+TGG - chr1_4:43642833-43642852 Msa0164360:intron 40.0%
GTGTATATAATGTGTGGGCA+TGG - chr1_4:43642839-43642858 Msa0164360:intron 40.0%
GTATATAATGTGTGGGCATG+GGG - chr1_4:43642841-43642860 Msa0164360:intron 40.0%
CCACAAATTTGAACGGGTAT+GGG + chr1_4:43642898-43642917 None:intergenic 40.0%
CCATACCCGTTCAAATTTGT+GGG - chr1_4:43642896-43642915 Msa0164360:intron 40.0%
ATACCCGCATTATTGGGTAT+GGG + chr1_4:43642940-43642959 None:intergenic 40.0%
AATACCCGCATTATTGGGTA+TGG + chr1_4:43642941-43642960 None:intergenic 40.0%
GGGTAAATACCCGCATTATT+GGG + chr1_4:43642946-43642965 None:intergenic 40.0%
!!! TATTTTTTGCGGGTACCCAA+TGG - chr1_4:43642978-43642997 Msa0164360:three_prime_UTR 40.0%
!!! ATTTTTTGCGGGTACCCAAT+GGG - chr1_4:43642979-43642998 Msa0164360:three_prime_UTR 40.0%
CATTAGTCAACTAGCTAAGG+GGG + chr1_4:43643032-43643051 None:intergenic 40.0%
GCATTAGTCAACTAGCTAAG+GGG + chr1_4:43643033-43643052 None:intergenic 40.0%
TATATATCTCTCACCCCACA+AGG + chr1_4:43643087-43643106 None:intergenic 40.0%
GTGGGGTGAGAGATATATAT+AGG - chr1_4:43643088-43643107 Msa0164360:intron 40.0%
! CATTGGAATGGGAGAGTTTT+GGG + chr1_4:43643333-43643352 None:intergenic 40.0%
! ACATTGGAATGGGAGAGTTT+TGG + chr1_4:43643334-43643353 None:intergenic 40.0%
! CTTTGTTTGCAAGTTTGGAG+GGG + chr1_4:43643414-43643433 None:intergenic 40.0%
!! GCTTTGTTTGCAAGTTTGGA+GGG + chr1_4:43643415-43643434 None:intergenic 40.0%
! GACTTTGTTTGAAAGTGTGC+TGG - chr1_4:43643439-43643458 Msa0164360:intron 40.0%
! TATTGGAAGGGGAAGGTTTT+GGG + chr1_4:43643492-43643511 None:intergenic 40.0%
! ATATTGGAAGGGGAAGGTTT+TGG + chr1_4:43643493-43643512 None:intergenic 40.0%
TAAAGGATATTGGAAGGGGA+AGG + chr1_4:43643499-43643518 None:intergenic 40.0%
GAAGAAAAGGAAGTAGCAAG+TGG + chr1_4:43643528-43643547 None:intergenic 40.0%
!! TGAGAGGGCTTTAGAAGAAA+AGG + chr1_4:43643541-43643560 None:intergenic 40.0%
!! TTAGGCTTTGTTTGCGAGTT+TGG + chr1_4:43643575-43643594 None:intergenic 40.0%
! AGGAGAAGAGAGAGCTTTAA+AGG - chr1_4:43643619-43643638 Msa0164360:intron 40.0%
!! GGAGAAGAGAGAGCTTTAAA+GGG - chr1_4:43643620-43643639 Msa0164360:intron 40.0%
GTTTGAGAGTTTGGATGGAA+AGG + chr1_4:43643823-43643842 None:intergenic 40.0%
! CCTTTGTTTGAGAGTTTGGA+TGG + chr1_4:43643828-43643847 None:intergenic 40.0%
CCATCCAAACTCTCAAACAA+AGG - chr1_4:43643825-43643844 Msa0164360:intron 40.0%
GACTTGATTGTGTGACTGTA+CGG + chr1_4:43643893-43643912 None:intergenic 40.0%
CCATCTGATTGGATCTTGAT+CGG + chr1_4:43643927-43643946 None:intergenic 40.0%
TCGCTAAAGTCAAGAATCGT+TGG + chr1_4:43644103-43644122 None:intergenic 40.0%
! TTGCTGATTGCAACATATCC+TGG - chr1_4:43644124-43644143 Msa0164360:three_prime_UTR 40.0%
CTTGTGAATTTGAATGGTCC+AGG + chr1_4:43644145-43644164 None:intergenic 40.0%
AAGGGGTTTAACAGAGGATT+AGG - chr1_4:43644474-43644493 Msa0164360:intron 40.0%
AGGGGTTTAACAGAGGATTA+GGG - chr1_4:43644475-43644494 Msa0164360:intron 40.0%
ACACGGAACCCATATTCATA+AGG + chr1_4:43644642-43644661 None:intergenic 40.0%
TATTGCTACGTTACGGTATC+TGG - chr1_4:43644675-43644694 Msa0164360:intron 40.0%
ACGGTATCTGGTTATCATAC+TGG - chr1_4:43644687-43644706 Msa0164360:intron 40.0%
TGCATATATCCTATTTGGGC+CGG - chr1_4:43644786-43644805 Msa0164360:intron 40.0%
ATCTGTAGCCACTGTAAACT+GGG + chr1_4:43644995-43645014 None:intergenic 40.0%
TTAGAGACGGAAAAGTGAAG+TGG + chr1_4:43645060-43645079 None:intergenic 40.0%
!! TATAGTTGGGATTTGCTGTG+TGG - chr1_4:43645150-43645169 Msa0164360:intron 40.0%
!! ATAGTTGGGATTTGCTGTGT+GGG - chr1_4:43645151-43645170 Msa0164360:intron 40.0%
TCAAAGTAAGTGAGGCTCTT+AGG - chr1_4:43645225-43645244 Msa0164360:intron 40.0%
TTTATGGTTATGGCCATGCA+TGG - chr1_4:43645257-43645276 Msa0164360:intron 40.0%
! AGAAAGTATGCATCCATGCA+TGG + chr1_4:43645273-43645292 None:intergenic 40.0%
AAACCTGTCTCTTATCAGCT+GGG + chr1_4:43645599-43645618 None:intergenic 40.0%
AAAACCTGTCTCTTATCAGC+TGG + chr1_4:43645600-43645619 None:intergenic 40.0%
AAACCCTCTTAAGCTCTTTG+TGG + chr1_4:43645623-43645642 None:intergenic 40.0%
TGGAAACAAAGTGCAGAAGA+TGG - chr1_4:43645674-43645693 Msa0164360:intron 40.0%
TTTGTTGCACAAAGTACACG+AGG - chr1_4:43645716-43645735 Msa0164360:intron 40.0%
!! AGAGCTCTGAATTGACAAGA+AGG + chr1_4:43645782-43645801 None:intergenic 40.0%
TTCTTGTCAATTCAGAGCTC+TGG - chr1_4:43645781-43645800 Msa0164360:intron 40.0%
TCTTGTCAATTCAGAGCTCT+GGG - chr1_4:43645782-43645801 Msa0164360:intron 40.0%
!! AATTCAGAGCTCTGGGAAAT+CGG - chr1_4:43645789-43645808 Msa0164360:intron 40.0%
! CATCAGTTTCCTCTCTAGAA+CGG + chr1_4:43645818-43645837 None:intergenic 40.0%
! ACTGATGATGATCTTCCTGA+AGG - chr1_4:43645831-43645850 Msa0164360:intron 40.0%
! TTTTCATTGGCGATAGAAGC+AGG + chr1_4:43645999-43646018 None:intergenic 40.0%
GCTTTGTAGTAAACATGAGC+AGG + chr1_4:43646047-43646066 None:intergenic 40.0%
GGGTGAGAAAGCTAACTTTA+AGG - chr1_4:43646187-43646206 Msa0164360:intron 40.0%
CATACTCCATTTGTCAATCC+TGG + chr1_4:43646283-43646302 None:intergenic 40.0%
CTACAACGCTCAAATCAACA+AGG - chr1_4:43646502-43646521 Msa0164360:intron 40.0%
ATAAATTTCACATGGGGGTG+AGG - chr1_4:43646564-43646583 Msa0164360:intron 40.0%
TAAATTTCACATGGGGGTGA+GGG - chr1_4:43646565-43646584 Msa0164360:intron 40.0%
! AATGGACTCTAGGTCTGAAA+TGG - chr1_4:43646609-43646628 Msa0164360:intron 40.0%
CAGAAAAATTCAGCCCAACA+TGG - chr1_4:43647388-43647407 Msa0164360:CDS 40.0%
!! CTTAACGGAGGTTGATAGAA+AGG + chr1_4:43647584-43647603 None:intergenic 40.0%
CTTTCTATCAACCTCCGTTA+AGG - chr1_4:43647582-43647601 Msa0164360:CDS 40.0%
GGTTTCAGATAGGTCCTTAA+CGG + chr1_4:43647599-43647618 None:intergenic 40.0%
!! AATGAGTGGTGCTATATGTC+CGG - chr1_4:43647635-43647654 Msa0164360:intron 40.0%
CGGCCAACAACTACTTTAAT+TGG + chr1_4:43647685-43647704 None:intergenic 40.0%
ACCATGACTAGCATGTATTG+CGG + chr1_4:43647705-43647724 None:intergenic 40.0%
ATAAACAACCACATACGCTC+GGG - chr1_4:43647751-43647770 Msa0164360:intron 40.0%
AAAAAAATCCCGAGCGTATG+TGG + chr1_4:43647762-43647781 None:intergenic 40.0%
!!! ACATACGCTCGGGATTTTTT+TGG - chr1_4:43647761-43647780 Msa0164360:intron 40.0%
!!! CATACGCTCGGGATTTTTTT+GGG - chr1_4:43647762-43647781 Msa0164360:intron 40.0%
GGGGACCATAACATTGTTTA+TGG + chr1_4:43647817-43647836 None:intergenic 40.0%
ACAGGGGATCATATATACAG+GGG + chr1_4:43647836-43647855 None:intergenic 40.0%
! GGTCATTGCGACAACTTTTT+AGG + chr1_4:43648457-43648476 None:intergenic 40.0%
TTCTTATGGAGAAGCCTTCA+TGG + chr1_4:43648705-43648724 None:intergenic 40.0%
AATCGAGTTAAGTTCACACG+AGG + chr1_4:43649003-43649022 None:intergenic 40.0%
!! CATATTATATGTAGCGGGCT+GGG - chr1_4:43649211-43649230 Msa0164360:intron 40.0%
!! ATATTATATGTAGCGGGCTG+GGG - chr1_4:43649212-43649231 Msa0164360:intron 40.0%
! ATATGAAGAAGTGAGGTGTC+CGG + chr1_4:43649246-43649265 None:intergenic 40.0%
CTAGCTACTAATCTGCTTAG+TGG - chr1_4:43649288-43649307 Msa0164360:intron 40.0%
AATCTGCTTAGTGGTGTTTG+AGG - chr1_4:43649297-43649316 Msa0164360:intron 40.0%
AACACGTGACATCACTATCA+TGG + chr1_4:43649522-43649541 None:intergenic 40.0%
! TGGGAGAAGTGTGGATATTA+CGG + chr1_4:43649664-43649683 None:intergenic 40.0%
GATCCTGATTTCGCTAACTT+TGG + chr1_4:43649759-43649778 None:intergenic 40.0%
GGAAAGACTTCTATCCATGA+AGG - chr1_4:43649806-43649825 Msa0164360:intron 40.0%
!! TGGTTTGCTACAAGAACAAG+AGG - chr1_4:43649863-43649882 Msa0164360:intron 40.0%
TTTGCTACAAGAACAAGAGG+AGG - chr1_4:43649866-43649885 Msa0164360:intron 40.0%
ACAAGAGGAGGAATCTAAGA+TGG - chr1_4:43649878-43649897 Msa0164360:intron 40.0%
! TGCTGAAAAAGCATGGGAAA+TGG - chr1_4:43649929-43649948 Msa0164360:intron 40.0%
! GCTGAAAAAGCATGGGAAAT+GGG - chr1_4:43649930-43649949 Msa0164360:intron 40.0%
GCAGCAAAAATGATCTTCCT+TGG + chr1_4:43649966-43649985 None:intergenic 40.0%
TGCTAAAATGGGTCTTGCTT+TGG - chr1_4:43649983-43650002 Msa0164360:intron 40.0%
!! ATTTTAGCCGTCACTCTGTT+TGG - chr1_4:43650045-43650064 Msa0164360:intron 40.0%
! TTTTAGCCGTCACTCTGTTT+GGG - chr1_4:43650046-43650065 Msa0164360:intron 40.0%
CGGTATTGTTTGATAGGGTT+AGG - chr1_4:43650307-43650326 Msa0164360:intron 40.0%
AACAAGTCCCTGCAAATTCA+AGG + chr1_4:43650388-43650407 None:intergenic 40.0%
ATGTGTCTGAGTGAAATGTG+AGG - chr1_4:43650410-43650429 Msa0164360:intron 40.0%
GGAAGGAATGAGTAAAAGAG+GGG - chr1_4:43650435-43650454 Msa0164360:intron 40.0%
CAGCATCACTACAGAGATAT+TGG - chr1_4:43650587-43650606 Msa0164360:CDS 40.0%
ACTACAGAGATATTGGATGG+AGG - chr1_4:43650594-43650613 Msa0164360:CDS 40.0%
CTACAGAGATATTGGATGGA+GGG - chr1_4:43650595-43650614 Msa0164360:CDS 40.0%
! GATGGACGCTTGTTAAATTC+AGG - chr1_4:43650625-43650644 Msa0164360:CDS 40.0%
AATTGGGGGAAAAATTTGGC+TGG - chr1_4:43650669-43650688 Msa0164360:CDS 40.0%
!!! TTTTGACTTCCTGGCATTAG+AGG - chr1_4:43650842-43650861 Msa0164360:intron 40.0%
AGACACAGGTATATGACATG+TGG - chr1_4:43651177-43651196 Msa0164360:intron 40.0%
AGAGGGTTTAACAGAGGATT+AGG - chr1_4:43651365-43651384 Msa0164360:intron 40.0%
GAGGGTTTAACAGAGGATTA+GGG - chr1_4:43651366-43651385 Msa0164360:intron 40.0%
AATGGGAGAGTTATCAGCAT+TGG - chr1_4:43651418-43651437 Msa0164360:intron 40.0%
ACACGGAACCCATATTCATA+AGG + chr1_4:43644642-43644661 None:intergenic 40.0%
ACGGTATCTGGTTATCATAG+TGG - chr1_4:43651578-43651597 Msa0164360:intron 40.0%
!! AAGTTCAGGTCTTTGGAATG+GGG - chr1_4:43651973-43651992 Msa0164360:intron 40.0%
ATCTGTAGCCACTGTAAACT+GGG + chr1_4:43644995-43645014 None:intergenic 40.0%
ACATTGTGCATTCATGGTCA+TGG - chr1_4:43652475-43652494 Msa0164360:intron 40.0%
AAAACATGTCTCTTCTCAGC+TGG + chr1_4:43652942-43652961 None:intergenic 40.0%
AAGATGGAGAAACTAGACAG+AGG - chr1_4:43653032-43653051 Msa0164360:intron 40.0%
!! TTTGCTGTTTGATGTACACG+AGG - chr1_4:43653058-43653077 Msa0164360:intron 40.0%
AGAACTCTGAGTTTACAAGG+AGG + chr1_4:43653124-43653143 None:intergenic 40.0%
TCCTTGTAAACTCAGAGTTC+TGG - chr1_4:43653123-43653142 Msa0164360:intron 40.0%
CCTTGTAAACTCAGAGTTCT+GGG - chr1_4:43653124-43653143 Msa0164360:intron 40.0%
TCCTAAAGGCCTATTTCACA+TGG - chr1_4:43653187-43653206 Msa0164360:intron 40.0%
TCCATGTGAAATAGGCCTTT+AGG + chr1_4:43653191-43653210 None:intergenic 40.0%
CACTTAGAGACTTGTACTCT+AGG + chr1_4:43645887-43645906 None:intergenic 40.0%
GGTTTGTAGTAAACATGAGC+AGG + chr1_4:43653383-43653402 None:intergenic 40.0%
ACCAGAAGTCAAAGCAAAAG+AGG - chr1_4:43653400-43653419 Msa0164360:intron 40.0%
!! TCCTCTTTTGCTTTGACTTC+TGG + chr1_4:43653404-43653423 None:intergenic 40.0%
GGGTGAGAAAGCTAACTTTA+AGG - chr1_4:43646187-43646206 Msa0164360:intron 40.0%
ACACTCCATTTGTCAATCCT+AGG + chr1_4:43653630-43653649 None:intergenic 40.0%
GACAAATGGAGTGTGAAAAG+AGG - chr1_4:43653636-43653655 Msa0164360:intron 40.0%
CTATGATGCTCGAATCAATG+AGG - chr1_4:43653861-43653880 Msa0164360:intron 40.0%
AGGGTTTAAGAAGAGCCTAT+AGG - chr1_4:43653881-43653900 Msa0164360:intron 40.0%
ATACATCGCAAAAAACACGG+AGG + chr1_4:43654138-43654157 None:intergenic 40.0%
TTGGATACAGAACACATGGA+TGG - chr1_4:43654938-43654957 Msa0164360:intron 40.0%
ATACAGAACACATGGATGGA+TGG - chr1_4:43654942-43654961 Msa0164360:intron 40.0%
TGGACATTCGTTCCTACTTT+AGG - chr1_4:43654962-43654981 Msa0164360:intron 40.0%
CATGTGACATCACCATGATA+TGG + chr1_4:43655099-43655118 None:intergenic 40.0%
GATCCTGATTTCGCTAACTT+TGG + chr1_4:43649759-43649778 None:intergenic 40.0%
! TGCTGAAAAAGCATGGGAAA+TGG - chr1_4:43649929-43649948 Msa0164360:intron 40.0%
! GCTGAAAAAGCATGGGAAAT+GGG - chr1_4:43649930-43649949 Msa0164360:intron 40.0%
GCAGCAAAAATGATCTTCCT+TGG + chr1_4:43649966-43649985 None:intergenic 40.0%
ATATTAGCCGTCACTCTGTT+TGG - chr1_4:43655706-43655725 Msa0164360:intron 40.0%
TATTAGCCGTCACTCTGTTT+GGG - chr1_4:43655707-43655726 Msa0164360:intron 40.0%
TATAGTAGTTTGATAGGGGC+AGG - chr1_4:43656070-43656089 Msa0164360:intron 40.0%
ATAGTAGTTTGATAGGGGCA+GGG - chr1_4:43656071-43656090 Msa0164360:intron 40.0%
AATGCAATGGAATTTGGCAG+GGG - chr1_4:43656245-43656264 Msa0164360:intron 40.0%
AATGGGAGAGTTATCAGCAT+TGG - chr1_4:43651418-43651437 Msa0164360:intron 40.0%
ACACGGAACCCATATTCATA+AGG + chr1_4:43644642-43644661 None:intergenic 40.0%
ACGGTATCTGGTTATCATAC+TGG - chr1_4:43644687-43644706 Msa0164360:intron 40.0%
ATATAAGAGTGAGTGGTTCC+TGG + chr1_4:43656771-43656790 None:intergenic 40.0%
GGAACCACTCACTCTTATAT+TGG - chr1_4:43656771-43656790 Msa0164360:intron 40.0%
TAAAGTGGTATGAACCGCAT+TGG + chr1_4:43656803-43656822 None:intergenic 40.0%
GGAAATGGTCACACATAAAG+TGG + chr1_4:43656818-43656837 None:intergenic 40.0%
TGGATTCCACACATTGGAAA+TGG + chr1_4:43656833-43656852 None:intergenic 40.0%
ATCTGTAGCCACTGTAAACT+GGG + chr1_4:43644995-43645014 None:intergenic 40.0%
TACAAGTAACGAGGACTCAT+TGG - chr1_4:43657365-43657384 Msa0164360:intron 40.0%
!! ACGTGTTGGTGATTGAAGTT+GGG - chr1_4:43657455-43657474 Msa0164360:intron 40.0%
ACATTGCGCATTTATGGTCA+TGG - chr1_4:43657565-43657584 Msa0164360:intron 40.0%
! AGAAAGTATGCATCCATGCA+TGG + chr1_4:43645273-43645292 None:intergenic 40.0%
TCAGCAGACTACTCATCATA+TGG + chr1_4:43657713-43657732 None:intergenic 40.0%
AGAAGATGGAGAAACTAGAC+CGG - chr1_4:43658061-43658080 Msa0164360:intron 40.0%
CTTCATACAACAAATCTCCC+CGG + chr1_4:43658083-43658102 None:intergenic 40.0%
CCCAGAACTCTGAATTTACA+AGG + chr1_4:43658158-43658177 None:intergenic 40.0%
!! CATCATTTTCGTCTCTAGGA+CGG + chr1_4:43658191-43658210 None:intergenic 40.0%
! TTTTCATTGGCGATAGAAGG+AGG + chr1_4:43658366-43658385 None:intergenic 40.0%
GCTTTGTAGTAAACATGAGC+AGG + chr1_4:43646047-43646066 None:intergenic 40.0%
AGCAAGGCTTCAAAATTTGG+TGG - chr1_4:43658515-43658534 Msa0164360:intron 40.0%
GGTGGATGCATTTGAAGAAT+TGG - chr1_4:43658533-43658552 Msa0164360:intron 40.0%
GGGTGAGAAAGCTAACTTTA+AGG - chr1_4:43646187-43646206 Msa0164360:intron 40.0%
!! CTACACTTTGTTGTTCAAGG+GGG + chr1_4:43658581-43658600 None:intergenic 40.0%
CAACAAAGTGTAGTAACCTC+TGG - chr1_4:43658588-43658607 Msa0164360:intron 40.0%
!!! TAGTAACCTCTGGTGGATTT+TGG - chr1_4:43658598-43658617 Msa0164360:intron 40.0%
CCCCCACTAGTTAAAATTTC+TGG + chr1_4:43658736-43658755 None:intergenic 40.0%
!!! AATTTTAACTAGTGGGGGCA+TGG - chr1_4:43658738-43658757 Msa0164360:five_prime_UTR 40.0%
!! GATGAAGTGTCGGAAGACAA+TGG - chr1_4:43642023-43642042 Msa0164360:three_prime_UTR 45.0%
!! AAGTGTCGGAAGACAATGGA+GGG - chr1_4:43642027-43642046 Msa0164360:three_prime_UTR 45.0%
!! AATGGAGGGTATTGCCAACA+AGG - chr1_4:43642041-43642060 Msa0164360:three_prime_UTR 45.0%
TGCCAACAAGGCATGTCAAA+TGG - chr1_4:43642053-43642072 Msa0164360:three_prime_UTR 45.0%
GCCAACAAGGCATGTCAAAT+GGG - chr1_4:43642054-43642073 Msa0164360:three_prime_UTR 45.0%
ACCCATTTGACATGCCTTGT+TGG + chr1_4:43642058-43642077 None:intergenic 45.0%
ACAAGGCATGTCAAATGGGT+CGG - chr1_4:43642058-43642077 Msa0164360:three_prime_UTR 45.0%
CGGTATAGTTTGATAGAGGC+AGG - chr1_4:43642397-43642416 Msa0164360:three_prime_UTR 45.0%
! GTTGTGAAAGTGCGGGTAAT+GGG + chr1_4:43642614-43642633 None:intergenic 45.0%
! TGTTGTGAAAGTGCGGGTAA+TGG + chr1_4:43642615-43642634 None:intergenic 45.0%
AATTTGAACGGGTATGGGTG+CGG + chr1_4:43642893-43642912 None:intergenic 45.0%
CCCATACCCGTTCAAATTTG+TGG - chr1_4:43642895-43642914 Msa0164360:intron 45.0%
CCCACAAATTTGAACGGGTA+TGG + chr1_4:43642899-43642918 None:intergenic 45.0%
CGGGTAAATACCCGCATTAT+TGG + chr1_4:43642947-43642966 None:intergenic 45.0%
AAAAAATACCCACGATGGGC+GGG + chr1_4:43642966-43642985 None:intergenic 45.0%
CAAAAAATACCCACGATGGG+CGG + chr1_4:43642967-43642986 None:intergenic 45.0%
CCGCAAAAAATACCCACGAT+GGG + chr1_4:43642970-43642989 None:intergenic 45.0%
!!! CCCATCGTGGGTATTTTTTG+CGG - chr1_4:43642967-43642986 Msa0164360:three_prime_UTR 45.0%
!!! CCATCGTGGGTATTTTTTGC+GGG - chr1_4:43642968-43642987 Msa0164360:three_prime_UTR 45.0%
TGCTTTGGTTGGAAGTTTGG+AGG - chr1_4:43643050-43643069 Msa0164360:three_prime_UTR 45.0%
GCTTTGGTTGGAAGTTTGGA+GGG - chr1_4:43643051-43643070 Msa0164360:three_prime_UTR 45.0%
CTTTGGTTGGAAGTTTGGAG+GGG - chr1_4:43643052-43643071 Msa0164360:three_prime_UTR 45.0%
!!! AGAAGGGTTTTGGGGAGTTT+TGG + chr1_4:43643249-43643268 None:intergenic 45.0%
TTTGCAAGTTTGGAGGGGAA+TGG + chr1_4:43643409-43643428 None:intergenic 45.0%
!! GGCTTTGTTTGCAAGTTTGG+AGG + chr1_4:43643416-43643435 None:intergenic 45.0%
! CTTTGTTTGCGAGTTTGGAG+GGG + chr1_4:43643570-43643589 None:intergenic 45.0%
!! GCTTTGTTTGCGAGTTTGGA+GGG + chr1_4:43643571-43643590 None:intergenic 45.0%
!! GAAGAGAGAGCTTTAAAGGG+TGG - chr1_4:43643623-43643642 Msa0164360:intron 45.0%
AGAGTTTGGATGGAAAGGGA+GGG + chr1_4:43643818-43643837 None:intergenic 45.0%
! TGCTGACTGCAACAAATCCA+GGG + chr1_4:43643867-43643886 None:intergenic 45.0%
! TTGCTGACTGCAACAAATCC+AGG + chr1_4:43643868-43643887 None:intergenic 45.0%
CTGATTGGATCTTGATCGGA+CGG + chr1_4:43643923-43643942 None:intergenic 45.0%
CCGATCAAGATCCAATCAGA+TGG - chr1_4:43643924-43643943 Msa0164360:three_prime_UTR 45.0%
! AAGGTCTGGGGTTCAAACAT+CGG + chr1_4:43644002-43644021 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+TGG + chr1_4:43644043-43644062 None:intergenic 45.0%
CTTTGTGAGCTTAGCTCAGT+TGG + chr1_4:43644048-43644067 None:intergenic 45.0%
CAGAGGATTAGGGACATTGT+CGG - chr1_4:43644485-43644504 Msa0164360:intron 45.0%
AGTGGGAGAGTTATCAGCAT+TGG - chr1_4:43644527-43644546 Msa0164360:intron 45.0%
!! TATCAGCATTGGCTGGAGAA+TGG - chr1_4:43644538-43644557 Msa0164360:intron 45.0%
!! ATCAGCATTGGCTGGAGAAT+GGG - chr1_4:43644539-43644558 Msa0164360:intron 45.0%
AAATCTTCTCCGGCCCAAAT+AGG + chr1_4:43644798-43644817 None:intergenic 45.0%
! GGTGTTGCAACATCTCTAGA+AGG - chr1_4:43644846-43644865 Msa0164360:three_prime_UTR 45.0%
GATCTGTAGCCACTGTAAAC+TGG + chr1_4:43644996-43645015 None:intergenic 45.0%
! TCTTAGGCATTGCGCGTTTA+TGG - chr1_4:43645241-43645260 Msa0164360:intron 45.0%
GCATTGCGCGTTTATGGTTA+TGG - chr1_4:43645247-43645266 Msa0164360:intron 45.0%
AACCTGTCTCTTATCAGCTG+GGG + chr1_4:43645598-43645617 None:intergenic 45.0%
! CTTAAGAGGGTTTGTTCCGA+AGG - chr1_4:43645630-43645649 Msa0164360:intron 45.0%
!! AATCGGAAACCGTTCTAGAG+AGG - chr1_4:43645806-43645825 Msa0164360:intron 45.0%
TGTTCGCGAAACAAACGTCT+TGG - chr1_4:43646021-43646040 Msa0164360:intron 45.0%
TGCATCCAAGCAACTTTAGC+CGG + chr1_4:43646446-43646465 None:intergenic 45.0%
CTAAAGTTGCTTGGATGCAG+CGG - chr1_4:43646447-43646466 Msa0164360:intron 45.0%
! GTCTCTTTTAGGCCCATGTT+GGG + chr1_4:43647404-43647423 None:intergenic 45.0%
! AGTCTCTTTTAGGCCCATGT+TGG + chr1_4:43647405-43647424 None:intergenic 45.0%
ATATAGGCCAAATACCTCCC+TGG - chr1_4:43647436-43647455 Msa0164360:CDS 45.0%
TATAGGCCAAATACCTCCCT+GGG - chr1_4:43647437-43647456 Msa0164360:CDS 45.0%
CGTGAAACTTAAAGGACCCA+GGG + chr1_4:43647456-43647475 None:intergenic 45.0%
ACGTGAAACTTAAAGGACCC+AGG + chr1_4:43647457-43647476 None:intergenic 45.0%
TTCAGATAGGTCCTTAACGG+AGG + chr1_4:43647596-43647615 None:intergenic 45.0%
ATCACTAGACTACGGCTCTA+CGG - chr1_4:43649085-43649104 Msa0164360:CDS 45.0%
!! GCATATTATATGTAGCGGGC+TGG - chr1_4:43649210-43649229 Msa0164360:intron 45.0%
! TATGAAGAAGTGAGGTGTCC+GGG + chr1_4:43649245-43649264 None:intergenic 45.0%
AAGACGAAGTGATATCGACC+AGG - chr1_4:43649466-43649485 Msa0164360:intron 45.0%
AGACGAAGTGATATCGACCA+GGG - chr1_4:43649467-43649486 Msa0164360:intron 45.0%
TTATGGAACTGAGCACACAG+AGG + chr1_4:43649547-43649566 None:intergenic 45.0%
CTGTGTGCTCAGTTCCATAA+AGG - chr1_4:43649547-43649566 Msa0164360:intron 45.0%
! GAGAAGTGTGGATATTACGG+AGG + chr1_4:43649661-43649680 None:intergenic 45.0%
TTGTGAACATGGGAGAAGTG+TGG + chr1_4:43649673-43649692 None:intergenic 45.0%
GCACCAAAGTTAGCGAAATC+AGG - chr1_4:43649753-43649772 Msa0164360:intron 45.0%
AGACTTCTATCCATGAAGGG+TGG - chr1_4:43649810-43649829 Msa0164360:intron 45.0%
ATGATGATCACCACCCTTCA+TGG + chr1_4:43649823-43649842 None:intergenic 45.0%
ATGAAGGGTGGTGATCATCA+TGG - chr1_4:43649822-43649841 Msa0164360:intron 45.0%
AGCTCGTTGCTGAAAAAGCA+TGG - chr1_4:43649922-43649941 Msa0164360:intron 45.0%
! GCTCGTTGCTGAAAAAGCAT+GGG - chr1_4:43649923-43649942 Msa0164360:intron 45.0%
AAATGGGTCGTTCTGATCCA+AGG - chr1_4:43649946-43649965 Msa0164360:intron 45.0%
GAGTGACGGCTAAAATCGAA+GGG + chr1_4:43650041-43650060 None:intergenic 45.0%
AGAGTGACGGCTAAAATCGA+AGG + chr1_4:43650042-43650061 None:intergenic 45.0%
GAATAGCCCAAACAGAGTGA+CGG + chr1_4:43650055-43650074 None:intergenic 45.0%
GAATTCAAAGACGACGACGA+CGG + chr1_4:43650081-43650100 None:intergenic 45.0%
ACCACTCTTCACCATTTGAC+TGG - chr1_4:43650244-43650263 Msa0164360:intron 45.0%
TCCAGTCAAATGGTGAAGAG+TGG + chr1_4:43650248-43650267 None:intergenic 45.0%
GTCTGAGTGAAATGTGAGGA+TGG - chr1_4:43650414-43650433 Msa0164360:intron 45.0%
GAGTGAAATGTGAGGATGGA+AGG - chr1_4:43650418-43650437 Msa0164360:intron 45.0%
!! GTGTACAAGGACCGATTTGA+TGG + chr1_4:43650513-43650532 None:intergenic 45.0%
TACAACACAGCACAACATGC+AGG - chr1_4:43650555-43650574 Msa0164360:CDS 45.0%
TGGATGGAGGGATGAATTGA+TGG - chr1_4:43650607-43650626 Msa0164360:CDS 45.0%
ACCTTTCACGTAGGGTTCAA+AGG - chr1_4:43650871-43650890 Msa0164360:intron 45.0%
CCTTTCACGTAGGGTTCAAA+GGG - chr1_4:43650872-43650891 Msa0164360:intron 45.0%
CTTTCACGTAGGGTTCAAAG+GGG - chr1_4:43650873-43650892 Msa0164360:intron 45.0%
ACACATGAAAAGAGGGCAAG+CGG + chr1_4:43650996-43651015 None:intergenic 45.0%
CTGAACAGAGGGTTTAACAG+AGG - chr1_4:43651359-43651378 Msa0164360:intron 45.0%
!! TATCAGCATTGGCAGGAGAA+TGG - chr1_4:43651429-43651448 Msa0164360:intron 45.0%
!! ATCAGCATTGGCAGGAGAAT+GGG - chr1_4:43651430-43651449 Msa0164360:intron 45.0%
!! ACTTGGTGCTGCTGTATCTT+TGG - chr1_4:43651643-43651662 Msa0164360:intron 45.0%
!! CTTGGTGCTGCTGTATCTTT+GGG - chr1_4:43651644-43651663 Msa0164360:intron 45.0%
TGCATATATCCTATCTGGGC+TGG - chr1_4:43651677-43651696 Msa0164360:intron 45.0%
! GGTGTTGCAACATCTTTGGA+AGG - chr1_4:43651737-43651756 Msa0164360:intron 45.0%
!! AGTTCAGGTCTTTGGAATGG+GGG - chr1_4:43651974-43651993 Msa0164360:intron 45.0%
TCACGGCCAATCCAAATGTA+TGG - chr1_4:43652070-43652089 Msa0164360:intron 45.0%
GATCTGTAGCCACTGTAAAC+TGG + chr1_4:43644996-43645015 None:intergenic 45.0%
!! TGTAGTTGGGATTTGCTGTG+TGG - chr1_4:43652378-43652397 Msa0164360:intron 45.0%
!! GTAGTTGGGATTTGCTGTGT+GGG - chr1_4:43652379-43652398 Msa0164360:intron 45.0%
TTCATGGTCATGGCTATGCA+TGG - chr1_4:43652485-43652504 Msa0164360:intron 45.0%
CTACCCTCTTAAGCTCATTG+AGG + chr1_4:43652965-43652984 None:intergenic 45.0%
CTCAATGAGCTTAAGAGGGT+AGG - chr1_4:43652963-43652982 Msa0164360:intron 45.0%
CCCAGAACTCTGAGTTTACA+AGG + chr1_4:43653127-43653146 None:intergenic 45.0%
!! AACTCAGAGTTCTGGGAGAT+CGG - chr1_4:43653131-43653150 Msa0164360:intron 45.0%
CCATCTTCTTCAGTCCACTT+CGG + chr1_4:43653773-43653792 None:intergenic 45.0%
! GATGGTGGCTGCTCATAAAA+GGG - chr1_4:43653819-43653838 Msa0164360:intron 45.0%
AAGGGAATGTTGTTCCCACA+AGG - chr1_4:43653837-43653856 Msa0164360:intron 45.0%
TCGAGCATCATAGTCCTTGT+GGG + chr1_4:43653854-43653873 None:intergenic 45.0%
TTCGAGCATCATAGTCCTTG+TGG + chr1_4:43653855-43653874 None:intergenic 45.0%
ATCGCAAAAAACACGGAGGA+TGG + chr1_4:43654134-43654153 None:intergenic 45.0%
GAACTAAAGTGGAGCAGACA+GGG + chr1_4:43655127-43655146 None:intergenic 45.0%
GCTCCAAAGTTAGCGAAATC+AGG - chr1_4:43655411-43655430 Msa0164360:intron 45.0%
ATGATGATCAGCACCCTTCA+TGG + chr1_4:43655481-43655500 None:intergenic 45.0%
!! ATGAAGGGTGCTGATCATCA+TGG - chr1_4:43655480-43655499 Msa0164360:intron 45.0%
AAATGGGTCGTTCTGATCCA+AGG - chr1_4:43649946-43649965 Msa0164360:intron 45.0%
GAATAGCCCAAACAGAGTGA+CGG + chr1_4:43650055-43650074 None:intergenic 45.0%
TAGTAGTTTGATAGGGGCAG+GGG - chr1_4:43656072-43656091 Msa0164360:intron 45.0%
CTGAGCAAGGGGTTTAATAG+AGG - chr1_4:43656273-43656292 Msa0164360:intron 45.0%
!! TATCAGCATTGGCTGGAGAA+TGG - chr1_4:43644538-43644557 Msa0164360:intron 45.0%
!! ATCAGCATTGGCTGGAGAAT+GGG - chr1_4:43644539-43644558 Msa0164360:intron 45.0%
TGCATATATCCTATCTGGGC+TGG - chr1_4:43651677-43651696 Msa0164360:intron 45.0%
! CATGGGTGTTGCAACATCTT+TGG - chr1_4:43656647-43656666 Msa0164360:intron 45.0%
! GGTGTTGCAACATCTTTGGA+AGG - chr1_4:43651737-43651756 Msa0164360:intron 45.0%
GTGTGACCATTTCCAATGTG+TGG - chr1_4:43656824-43656843 Msa0164360:intron 45.0%
AGTGATGTTAGAGAGAGGGA+GGG - chr1_4:43656875-43656894 Msa0164360:intron 45.0%
GATCTGTAGCCACTGTAAAC+TGG + chr1_4:43644996-43645015 None:intergenic 45.0%
AATGACTCACTGTCACGTGT+TGG - chr1_4:43657441-43657460 Msa0164360:intron 45.0%
!! CACGTGTTGGTGATTGAAGT+TGG - chr1_4:43657454-43657473 Msa0164360:intron 45.0%
!! TGAAGTTGGGATTTGCTGTG+TGG - chr1_4:43657468-43657487 Msa0164360:intron 45.0%
!! GAAGTTGGGATTTGCTGTGT+GGG - chr1_4:43657469-43657488 Msa0164360:intron 45.0%
AGACTTCTGTAGTGACCATG+AGG + chr1_4:43657500-43657519 None:intergenic 45.0%
TTTATGGTCATGGCCATGCA+TGG - chr1_4:43657575-43657594 Msa0164360:intron 45.0%
! GTCGATTCAATGATGTGGGA+AGG + chr1_4:43657853-43657872 None:intergenic 45.0%
AAAACCTGTCTCTTCTCAGC+TGG + chr1_4:43657973-43657992 None:intergenic 45.0%
GAAGATGGAGAAACTAGACC+GGG - chr1_4:43658062-43658081 Msa0164360:intron 45.0%
AAGATGGAGAAACTAGACCG+GGG - chr1_4:43658063-43658082 Msa0164360:intron 45.0%
TCCAAAAGGCCTCTTTCACA+TGG - chr1_4:43658215-43658234 Msa0164360:intron 45.0%
! TCCATGTGAAAGAGGCCTTT+TGG + chr1_4:43658219-43658238 None:intergenic 45.0%
CAAAGTGTAGTAACCTCTGG+TGG - chr1_4:43658591-43658610 Msa0164360:intron 45.0%
GGCTGTATTGTGATCAGTGA+CGG - chr1_4:43658708-43658727 Msa0164360:intron 45.0%
!!! GATATTTTATATAAATATAT+AGG - chr1_4:43646997-43647016 Msa0164360:CDS 5.0%
!! ATTATAAGAAAATTTATTTA+AGG - chr1_4:43647350-43647369 Msa0164360:CDS 5.0%
!!! AAAAAATAAATTATTTCTTA+TGG + chr1_4:43648719-43648738 None:intergenic 5.0%
!!! TATCTATAAAAAAAATATTT+TGG - chr1_4:43651031-43651050 Msa0164360:intron 5.0%
!! AAAAAAAAAAAAATACTATT+AGG - chr1_4:43653974-43653993 Msa0164360:intron 5.0%
!! TTATAAGTAATTAATTTATT+TGG + chr1_4:43654752-43654771 None:intergenic 5.0%
!!! ATGTTTATATATTTTTTTAA+GGG + chr1_4:43654844-43654863 None:intergenic 5.0%
!!! TATGTTTATATATTTTTTTA+AGG + chr1_4:43654845-43654864 None:intergenic 5.0%
!!! TTTTATTTTATTTTTCTATT+TGG - chr1_4:43657015-43657034 Msa0164360:intron 5.0%
GCTTAGCATGGCTGCAAAGT+TGG - chr1_4:43641888-43641907 Msa0164360:three_prime_UTR 50.0%
AGAGAAACTTCTCCCCGTCA+AGG - chr1_4:43641936-43641955 Msa0164360:three_prime_UTR 50.0%
!! GAAGTGTCGGAAGACAATGG+AGG - chr1_4:43642026-43642045 Msa0164360:three_prime_UTR 50.0%
TGCGAAACAAACCAACCCCT+AGG - chr1_4:43642434-43642453 Msa0164360:three_prime_UTR 50.0%
GCGAAACAAACCAACCCCTA+GGG - chr1_4:43642435-43642454 Msa0164360:three_prime_UTR 50.0%
AACAAACCAACCCCTAGGGA+TGG - chr1_4:43642439-43642458 Msa0164360:three_prime_UTR 50.0%
GATGGCAATGGGTACCCATT+GGG - chr1_4:43642457-43642476 Msa0164360:three_prime_UTR 50.0%
ACTATGGTACCCTGCCCAAT+GGG + chr1_4:43642474-43642493 None:intergenic 50.0%
TAAAACGCGGGTATGGGGAT+GGG + chr1_4:43642498-43642517 None:intergenic 50.0%
TTAAAACGCGGGTATGGGGA+TGG + chr1_4:43642499-43642518 None:intergenic 50.0%
!! ACCAAACTTGTTGCCCACGA+GGG + chr1_4:43642547-43642566 None:intergenic 50.0%
ATACCCATAGGGTATGGGGA+CGG + chr1_4:43642572-43642591 None:intergenic 50.0%
CGGGCACTTAGATACCCATA+GGG + chr1_4:43642583-43642602 None:intergenic 50.0%
ACGGGCACTTAGATACCCAT+AGG + chr1_4:43642584-43642603 None:intergenic 50.0%
TATAATGTGTGGGCATGGGG+CGG - chr1_4:43642844-43642863 Msa0164360:intron 50.0%
ATTTGAACGGGTATGGGTGC+GGG + chr1_4:43642892-43642911 None:intergenic 50.0%
GCATTATTGGGTATGGGCCT+GGG + chr1_4:43642934-43642953 None:intergenic 50.0%
CAGGCCCATACCCAATAATG+CGG - chr1_4:43642933-43642952 Msa0164360:intron 50.0%
AGGCCCATACCCAATAATGC+GGG - chr1_4:43642934-43642953 Msa0164360:intron 50.0%
CCCGCAAAAAATACCCACGA+TGG + chr1_4:43642971-43642990 None:intergenic 50.0%
CAATTGGACCCAAGCCCATT+GGG + chr1_4:43642996-43643015 None:intergenic 50.0%
GAAGTTTGGAGGGGAAGAGA+GGG - chr1_4:43643061-43643080 Msa0164360:three_prime_UTR 50.0%
!!! GGGTTTTGGGGAGTTTTGGA+AGG + chr1_4:43643245-43643264 None:intergenic 50.0%
TTTGCGAGTTTGGAGGGGAA+GGG + chr1_4:43643565-43643584 None:intergenic 50.0%
!! GGCTTTGTTTGCGAGTTTGG+AGG + chr1_4:43643572-43643591 None:intergenic 50.0%
GAGAGTTTGGATGGAAAGGG+AGG + chr1_4:43643819-43643838 None:intergenic 50.0%
CTGAGCAAGGGGTTTAACAG+AGG - chr1_4:43644468-43644487 Msa0164360:intron 50.0%
!! GGAGAGTTATCAGCATTGGC+TGG - chr1_4:43644531-43644550 Msa0164360:intron 50.0%
!! ACTTGGTGCTGCTGTCTCTT+TGG - chr1_4:43644752-43644771 Msa0164360:intron 50.0%
!! CTTGGTGCTGCTGTCTCTTT+GGG - chr1_4:43644753-43644772 Msa0164360:intron 50.0%
GCAGATGACCCAGTTTACAG+TGG - chr1_4:43644984-43645003 Msa0164360:three_prime_UTR 50.0%
ACGCAACACTTGTGCTCCTT+CGG + chr1_4:43645649-43645668 None:intergenic 50.0%
! GCACAAGTGTTGCGTGAACT+TGG - chr1_4:43645654-43645673 Msa0164360:intron 50.0%
AGTGCAGAAGATGGAGAAGC+TGG - chr1_4:43645683-43645702 Msa0164360:intron 50.0%
AGAAGATGGAGAAGCTGGAC+AGG - chr1_4:43645688-43645707 Msa0164360:intron 50.0%
GAAGATGGAGAAGCTGGACA+GGG - chr1_4:43645689-43645708 Msa0164360:intron 50.0%
AAGATGGAGAAGCTGGACAG+GGG - chr1_4:43645690-43645709 Msa0164360:intron 50.0%
TCCTGAAGGCCTCGTTAACA+TGG - chr1_4:43645845-43645864 Msa0164360:intron 50.0%
TCCATGTTAACGAGGCCTTC+AGG + chr1_4:43645849-43645868 None:intergenic 50.0%
CGATAGAAGCAGGCACATCA+TGG + chr1_4:43645989-43646008 None:intergenic 50.0%
ACAAGTGGACCTAAAGACGC+CGG - chr1_4:43646424-43646443 Msa0164360:intron 50.0%
CAACTTTAGCCGGCGTCTTT+AGG + chr1_4:43646436-43646455 None:intergenic 50.0%
GAGGGAAGGTTATTCCTACG+AGG - chr1_4:43646478-43646497 Msa0164360:intron 50.0%
! TTGAGCGTTGTAGTCCTCGT+AGG + chr1_4:43646495-43646514 None:intergenic 50.0%
!! AAAGGACCCAGGGAGGTATT+TGG + chr1_4:43647446-43647465 None:intergenic 50.0%
GAAACTTAAAGGACCCAGGG+AGG + chr1_4:43647453-43647472 None:intergenic 50.0%
!! AGTGGTGCTATATGTCCGGA+AGG - chr1_4:43647639-43647658 Msa0164360:intron 50.0%
GCCGCAATACATGCTAGTCA+TGG - chr1_4:43647701-43647720 Msa0164360:intron 50.0%
CAAATCGGTCCTTGTACACG+TGG - chr1_4:43650514-43650533 Msa0164360:CDS 50.0%
GTCCTTGTACACGTGGTTGA+CGG - chr1_4:43650521-43650540 Msa0164360:CDS 50.0%
TCCTTGTACACGTGGTTGAC+GGG - chr1_4:43650522-43650541 Msa0164360:CDS 50.0%
ACACAGCACAACATGCAGGA+CGG - chr1_4:43650559-43650578 Msa0164360:CDS 50.0%
! GGCTGGTCCGTGTAAATTCA+AGG - chr1_4:43650686-43650705 Msa0164360:CDS 50.0%
AGGCTGTTGACCTTTCACGT+AGG - chr1_4:43650862-43650881 Msa0164360:intron 50.0%
GGCTGTTGACCTTTCACGTA+GGG - chr1_4:43650863-43650882 Msa0164360:intron 50.0%
CCCTTTGAACCCTACGTGAA+AGG + chr1_4:43650875-43650894 None:intergenic 50.0%
! CGCAACTAGGCCTTTTTGGA+TGG + chr1_4:43650962-43650981 None:intergenic 50.0%
! GTTGCGCAACTAGGCCTTTT+TGG + chr1_4:43650966-43650985 None:intergenic 50.0%
GGGCAAAAAGTTGCGCAACT+AGG + chr1_4:43650975-43650994 None:intergenic 50.0%
CACATGAAAAGAGGGCAAGC+GGG + chr1_4:43650995-43651014 None:intergenic 50.0%
GGATTAGGGACATTGTCAGC+TGG - chr1_4:43651380-43651399 Msa0164360:intron 50.0%
TTAGGGACATTGTCAGCTGG+AGG - chr1_4:43651383-43651402 Msa0164360:intron 50.0%
!! GGAGAGTTATCAGCATTGGC+AGG - chr1_4:43644531-43644550 Msa0164360:intron 50.0%
! ATATCCTATCTGGGCTGGAG+AGG - chr1_4:43651682-43651701 Msa0164360:intron 50.0%
AAATCCTCTCCAGCCCAGAT+AGG + chr1_4:43651689-43651708 None:intergenic 50.0%
! CACGGGTGTTGCAACATCTT+TGG - chr1_4:43651733-43651752 Msa0164360:intron 50.0%
!! GTTCAGGTCTTTGGAATGGG+GGG - chr1_4:43651975-43651994 Msa0164360:intron 50.0%
GCTGATGACCCAGTTTACAG+TGG - chr1_4:43652224-43652243 Msa0164360:intron 50.0%
CTTAAGAGGGTAGGTTCCGA+AGG - chr1_4:43652972-43652991 Msa0164360:intron 50.0%
! TTTTGTCCAAAACCCGCCAG+AGG + chr1_4:43653588-43653607 None:intergenic 50.0%
!! CCGAAGTGGACTGAAGAAGA+TGG - chr1_4:43653770-43653789 Msa0164360:intron 50.0%
!! AGTGGACTGAAGAAGATGGC+CGG - chr1_4:43653774-43653793 Msa0164360:intron 50.0%
TGCATCCAAGCAACTTAGGC+CGG + chr1_4:43653796-43653815 None:intergenic 50.0%
CCTAAGTTGCTTGGATGCAG+CGG - chr1_4:43653797-43653816 Msa0164360:intron 50.0%
! GGATGGTGGCTGCTCATAAA+AGG - chr1_4:43653818-43653837 Msa0164360:intron 50.0%
GGAACTAAAGTGGAGCAGAC+AGG + chr1_4:43655128-43655147 None:intergenic 50.0%
GGATTAGGGACATTCTCAGC+TGG - chr1_4:43656294-43656313 Msa0164360:intron 50.0%
TTAGGGACATTCTCAGCTGG+AGG - chr1_4:43656297-43656316 Msa0164360:intron 50.0%
!! GGAGAGTTATCAGCATTGGC+TGG - chr1_4:43644531-43644550 Msa0164360:intron 50.0%
!! ACTTGGTGCTGCTGTCTCTT+TGG - chr1_4:43644752-43644771 Msa0164360:intron 50.0%
!! CTTGGTGCTGCTGTCTCTTT+GGG - chr1_4:43644753-43644772 Msa0164360:intron 50.0%
CGAGGATCTGCATAACCTTG+TGG - chr1_4:43656614-43656633 Msa0164360:intron 50.0%
GAGTGATGTTAGAGAGAGGG+AGG - chr1_4:43656874-43656893 Msa0164360:intron 50.0%
ATGTTAGAGAGAGGGAGGGA+GGG - chr1_4:43656879-43656898 Msa0164360:intron 50.0%
TACCTCACCGCCAATCCAAA+TGG - chr1_4:43657189-43657208 Msa0164360:intron 50.0%
!! ATCCATTTGGATTGGCGGTG+AGG + chr1_4:43657194-43657213 None:intergenic 50.0%
GCTGATGACCCAGTTTACAG+TGG - chr1_4:43652224-43652243 Msa0164360:intron 50.0%
CTTCTGTAGTGACCATGAGG+TGG + chr1_4:43657497-43657516 None:intergenic 50.0%
CGCAATGAGCTTAAGAGGGT+AGG - chr1_4:43657994-43658013 Msa0164360:intron 50.0%
! CTTAAGAGGGTAGGCTCTGA+AGG - chr1_4:43658003-43658022 Msa0164360:intron 50.0%
!! GCAAAAGTGTTGCGCGAACT+AGG - chr1_4:43658027-43658046 Msa0164360:intron 50.0%
! CGATAGAAGGAGGCACATCA+TGG + chr1_4:43658356-43658375 None:intergenic 50.0%
TCTGGTCCAAAATCCACCAG+AGG + chr1_4:43658607-43658626 None:intergenic 50.0%
AAATGGGTCGGTCCGATCCA+AGG - chr1_4:43642070-43642089 Msa0164360:three_prime_UTR 55.0%
CAACCCCTAGGGATGGCAAT+GGG - chr1_4:43642446-43642465 Msa0164360:three_prime_UTR 55.0%
GTACCCATTGCCATCCCTAG+GGG + chr1_4:43642452-43642471 None:intergenic 55.0%
GGTACCCATTGCCATCCCTA+GGG + chr1_4:43642453-43642472 None:intergenic 55.0%
GGATGGCAATGGGTACCCAT+TGG - chr1_4:43642456-43642475 Msa0164360:three_prime_UTR 55.0%
CAATGGGTACCCATTGGGCA+GGG - chr1_4:43642462-43642481 Msa0164360:three_prime_UTR 55.0%
CACTATGGTACCCTGCCCAA+TGG + chr1_4:43642475-43642494 None:intergenic 55.0%
! CTTGTTGCCCACGAGGGTAT+GGG + chr1_4:43642541-43642560 None:intergenic 55.0%
! ACTTGTTGCCCACGAGGGTA+TGG + chr1_4:43642542-43642561 None:intergenic 55.0%
ACCCTCGTGGGCAACAAGTT+TGG - chr1_4:43642543-43642562 Msa0164360:three_prime_UTR 55.0%
!! CACCAAACTTGTTGCCCACG+AGG + chr1_4:43642548-43642567 None:intergenic 55.0%
TACCCATAGGGTATGGGGAC+GGG + chr1_4:43642571-43642590 None:intergenic 55.0%
!! AAAGTGCGGGTAATGGGTGC+GGG + chr1_4:43642608-43642627 None:intergenic 55.0%
!! GAAAGTGCGGGTAATGGGTG+CGG + chr1_4:43642609-43642628 None:intergenic 55.0%
ATAATGTGTGGGCATGGGGC+GGG - chr1_4:43642845-43642864 Msa0164360:intron 55.0%
CGCATTATTGGGTATGGGCC+TGG + chr1_4:43642935-43642954 None:intergenic 55.0%
GGTATTTACCCGCCCATCGT+GGG - chr1_4:43642955-43642974 Msa0164360:three_prime_UTR 55.0%
GCAATTGGACCCAAGCCCAT+TGG + chr1_4:43642997-43643016 None:intergenic 55.0%
TTGGGTCCAATTGCCATCCC+TGG - chr1_4:43643003-43643022 Msa0164360:three_prime_UTR 55.0%
ACTAGCTAAGGGGGTTGCCA+GGG + chr1_4:43643023-43643042 None:intergenic 55.0%
AACTAGCTAAGGGGGTTGCC+AGG + chr1_4:43643024-43643043 None:intergenic 55.0%
GGAAGTTTGGAGGGGAAGAG+AGG - chr1_4:43643060-43643079 Msa0164360:three_prime_UTR 55.0%
TTGGAGGGGAAGGGATGAGA+GGG + chr1_4:43643556-43643575 None:intergenic 55.0%
TTTGGAGGGGAAGGGATGAG+AGG + chr1_4:43643557-43643576 None:intergenic 55.0%
GTTTGCGAGTTTGGAGGGGA+AGG + chr1_4:43643566-43643585 None:intergenic 55.0%
GGATTAGGGACATTGTCGGC+TGG - chr1_4:43644489-43644508 Msa0164360:intron 55.0%
! TTAGGGACATTGTCGGCTGG+AGG - chr1_4:43644492-43644511 Msa0164360:intron 55.0%
!! TGGAGGACTTGCTGTTGGAG+TGG - chr1_4:43644509-43644528 Msa0164360:intron 55.0%
!! GGAGGACTTGCTGTTGGAGT+GGG - chr1_4:43644510-43644529 Msa0164360:intron 55.0%
!! CAGCTGCTTGGTGCGTAAGA+AGG + chr1_4:43644965-43644984 None:intergenic 55.0%
AAGGACCCCCTCGAACAACA+AGG - chr1_4:43646206-43646225 Msa0164360:intron 55.0%
! AGACGCCGGCTAAAGTTGCT+TGG - chr1_4:43646438-43646457 Msa0164360:intron 55.0%
AAGTTGCTTGGATGCAGCGG+AGG - chr1_4:43646450-43646469 Msa0164360:intron 55.0%
GAGTCTCTGACTCTACTCCC+TGG + chr1_4:43649487-43649506 None:intergenic 55.0%
TCCCGTCAACCACGTGTACA+AGG + chr1_4:43650526-43650545 None:intergenic 55.0%
GGTCAACAGCCTCTAATGCC+AGG + chr1_4:43650854-43650873 None:intergenic 55.0%
CAGGGGCAACTCTGAACAGA+GGG - chr1_4:43651348-43651367 Msa0164360:intron 55.0%
!! TCAGCTGGAGGACTTGCTGT+CGG - chr1_4:43651395-43651414 Msa0164360:intron 55.0%
!! TGGAGGACTTGCTGTCGGAA+TGG - chr1_4:43651400-43651419 Msa0164360:intron 55.0%
!! GGAGGACTTGCTGTCGGAAT+GGG - chr1_4:43651401-43651420 Msa0164360:intron 55.0%
GCGCAACACTCTTGCTCCTT+CGG + chr1_4:43652991-43653010 None:intergenic 55.0%
!! GCAAGAGTGTTGCGCGAACT+TGG - chr1_4:43652996-43653015 Msa0164360:intron 55.0%
! TGGCAATAGGAGGCACAGCA+TGG + chr1_4:43653328-43653347 None:intergenic 55.0%
!! ACCGCGTCTTGCTGTTCAAG+GGG + chr1_4:43653563-43653582 None:intergenic 55.0%
!! CACCGCGTCTTGCTGTTCAA+GGG + chr1_4:43653564-43653583 None:intergenic 55.0%
CCGCTGCATCCAAGCAACTT+AGG + chr1_4:43646450-43646469 None:intergenic 55.0%
AGTTGCTTGGATGCAGCGGA+TGG - chr1_4:43646451-43646470 Msa0164360:intron 55.0%
!! TCAGCTGGAGGACTTGCTGT+CGG - chr1_4:43651395-43651414 Msa0164360:intron 55.0%
!! TGGAGGACTTGCTGTCGGAA+TGG - chr1_4:43651400-43651419 Msa0164360:intron 55.0%
!! GGAGGACTTGCTGTCGGAAT+GGG - chr1_4:43651401-43651420 Msa0164360:intron 55.0%
!! ATATCCTATCTGGGCTGGCG+AGG - chr1_4:43656596-43656615 Msa0164360:intron 55.0%
GATGTTAGAGAGAGGGAGGG+AGG - chr1_4:43656878-43656897 Msa0164360:intron 55.0%
GGCGGTGAGGTAGCAGAATA+AGG + chr1_4:43657181-43657200 None:intergenic 55.0%
CCATTGCCATCCCTAGGGGT+TGG + chr1_4:43642448-43642467 None:intergenic 60.0%
CCAACCCCTAGGGATGGCAA+TGG - chr1_4:43642445-43642464 Msa0164360:three_prime_UTR 60.0%
GGGTACCCATTGCCATCCCT+AGG + chr1_4:43642454-43642473 None:intergenic 60.0%
GCAATGGGTACCCATTGGGC+AGG - chr1_4:43642461-43642480 Msa0164360:three_prime_UTR 60.0%
GGGTATGGGGATGGGCACTA+TGG + chr1_4:43642490-43642509 None:intergenic 60.0%
TGCCCGTCCCCATACCCTAT+GGG - chr1_4:43642566-43642585 Msa0164360:three_prime_UTR 60.0%
TAATGTGTGGGCATGGGGCG+GGG - chr1_4:43642846-43642865 Msa0164360:intron 60.0%
AACGGGTATGGGTGCGGGTA+CGG + chr1_4:43642887-43642906 None:intergenic 60.0%
GTGGGTAATTACCCGTGCCC+AGG - chr1_4:43642914-43642933 Msa0164360:intron 60.0%
ATTGGGTATGGGCCTGGGCA+CGG + chr1_4:43642929-43642948 None:intergenic 60.0%
GGGTATTTACCCGCCCATCG+TGG - chr1_4:43642954-43642973 Msa0164360:three_prime_UTR 60.0%
! TTGCGGGTACCCAATGGGCT+TGG - chr1_4:43642984-43643003 Msa0164360:three_prime_UTR 60.0%
! TGCGGGTACCCAATGGGCTT+GGG - chr1_4:43642985-43643004 Msa0164360:three_prime_UTR 60.0%
GGGTTGCCAGGGATGGCAAT+TGG + chr1_4:43643012-43643031 None:intergenic 60.0%
! AGGGGAAGAGAGGGCCTTGT+GGG - chr1_4:43643070-43643089 Msa0164360:intron 60.0%
TGCAGGGGCAACTCTGAGCA+AGG - chr1_4:43644455-43644474 Msa0164360:intron 60.0%
GCAGGGGCAACTCTGAGCAA+GGG - chr1_4:43644456-43644475 Msa0164360:intron 60.0%
CAGGGGCAACTCTGAGCAAG+GGG - chr1_4:43644457-43644476 Msa0164360:intron 60.0%
!! TCGGCTGGAGGACTTGCTGT+TGG - chr1_4:43644504-43644523 Msa0164360:intron 60.0%
CTGGGTCATCTGCAGCTGCT+TGG + chr1_4:43644977-43644996 None:intergenic 60.0%
GCTGTGTGGGAACCACCTCA+TGG - chr1_4:43645164-43645183 Msa0164360:intron 60.0%
GGCCCCAGCTGATAAGAGAC+AGG - chr1_4:43645593-43645612 Msa0164360:intron 60.0%
!! CTGCGCCTTGTTGTTCGAGG+GGG + chr1_4:43646214-43646233 None:intergenic 60.0%
TCTCCTCCTAAACCCGCCAG+AGG + chr1_4:43646240-43646259 None:intergenic 60.0%
TGCTTGGATGCAGCGGAGGA+TGG - chr1_4:43646454-43646473 Msa0164360:intron 60.0%
GCAGGGGCAACTCTGAACAG+AGG - chr1_4:43651347-43651366 Msa0164360:intron 60.0%
CTGGGTCATCAGCAGCAGCT+TGG + chr1_4:43652217-43652236 None:intergenic 60.0%
GCTGTGTGGGAACCACCTCA+TGG - chr1_4:43645164-43645183 Msa0164360:intron 60.0%
!! CCGCGTCTTGCTGTTCAAGG+GGG + chr1_4:43653562-43653581 None:intergenic 60.0%
CCCCCTTGAACAGCAAGACG+CGG - chr1_4:43653559-43653578 Msa0164360:intron 60.0%
!! CCACCGCGTCTTGCTGTTCA+AGG + chr1_4:43653565-43653584 None:intergenic 60.0%
CCTTGAACAGCAAGACGCGG+TGG - chr1_4:43653562-43653581 Msa0164360:intron 60.0%
GATGGCCGGCCTAAGTTGCT+TGG - chr1_4:43653788-43653807 Msa0164360:intron 60.0%
TGCTTGGATGCAGCGGATGG+TGG - chr1_4:43653804-43653823 Msa0164360:intron 60.0%
GCAGGGGCAACTCTGAGCAA+GGG - chr1_4:43644456-43644475 Msa0164360:intron 60.0%
CAGGGGCAACTCTGAGCAAG+GGG - chr1_4:43644457-43644476 Msa0164360:intron 60.0%
AGATCCTCGCCAGCCCAGAT+AGG + chr1_4:43656603-43656622 None:intergenic 60.0%
ATGCGCGTGCGAGAAATGCC+AGG - chr1_4:43656750-43656769 Msa0164360:intron 60.0%
TTAGAGAGAGGGAGGGAGGG+AGG - chr1_4:43656882-43656901 Msa0164360:intron 60.0%
TAGAGAGAGGGAGGGAGGGA+GGG - chr1_4:43656883-43656902 Msa0164360:intron 60.0%
CTGGGTCATCAGCAGCTGCT+TGG + chr1_4:43657314-43657333 None:intergenic 60.0%
GCTGTGTGGGAACCACCTCA+TGG - chr1_4:43645164-43645183 Msa0164360:intron 60.0%
GGCACCAGCTGAGAAGAGAC+AGG - chr1_4:43657966-43657985 Msa0164360:intron 60.0%
AGGGTATGGGCCCGGGTATG+GGG + chr1_4:43642528-43642547 None:intergenic 65.0%
! GAGGGTATGGGCCCGGGTAT+GGG + chr1_4:43642529-43642548 None:intergenic 65.0%
GTGCCCGTCCCCATACCCTA+TGG - chr1_4:43642565-43642584 Msa0164360:three_prime_UTR 65.0%
!! CGGGTAATGGGTGCGGGTAC+GGG + chr1_4:43642602-43642621 None:intergenic 65.0%
!! GCGGGTAATGGGTGCGGGTA+CGG + chr1_4:43642603-43642622 None:intergenic 65.0%
ACGGGTATGGGTGCGGGTAC+GGG + chr1_4:43642886-43642905 None:intergenic 65.0%
TTGGGTATGGGCCTGGGCAC+GGG + chr1_4:43642928-43642947 None:intergenic 65.0%
GCTAAGGGGGTTGCCAGGGA+TGG + chr1_4:43643019-43643038 None:intergenic 65.0%
GAGGGGAAGAGAGGGCCTTG+TGG - chr1_4:43643069-43643088 Msa0164360:intron 65.0%
! GGGGAAGAGAGGGCCTTGTG+GGG - chr1_4:43643071-43643090 Msa0164360:intron 65.0%
!! TGGCCTCTGGCGGGTTTAGG+AGG - chr1_4:43646234-43646253 Msa0164360:intron 65.0%
GATGCAGCGGAGGATGGCGA+GGG - chr1_4:43646460-43646479 Msa0164360:intron 65.0%
GGCAGGGGCAACTCTGAGCA+AGG - chr1_4:43656260-43656279 Msa0164360:intron 65.0%
! CGAGGGTATGGGCCCGGGTA+TGG + chr1_4:43642530-43642549 None:intergenic 70.0%
TACCCGGGCCCATACCCTCG+TGG - chr1_4:43642530-43642549 Msa0164360:three_prime_UTR 70.0%
ACCCGGGCCCATACCCTCGT+GGG - chr1_4:43642531-43642550 Msa0164360:three_prime_UTR 70.0%
! TGCCCACGAGGGTATGGGCC+CGG + chr1_4:43642536-43642555 None:intergenic 70.0%
GGATGCAGCGGAGGATGGCG+AGG - chr1_4:43646459-43646478 Msa0164360:intron 70.0%
CAGCGGAGGATGGCGAGGGA+AGG - chr1_4:43646464-43646483 Msa0164360:intron 70.0%
!! GCGGGCTGGGGTTCGAATCC+CGG - chr1_4:43649224-43649243 Msa0164360:intron 70.0%
CAGCAAGACGCGGTGGCCTC+TGG - chr1_4:43653569-43653588 Msa0164360:intron 70.0%
CAAGACGCGGTGGCCTCTGG+CGG - chr1_4:43653572-43653591 Msa0164360:intron 70.0%
AAGACGCGGTGGCCTCTGGC+GGG - chr1_4:43653573-43653592 Msa0164360:intron 70.0%
!!! CGGTGGCCTCTGGCGGGTTT+TGG - chr1_4:43653579-43653598 Msa0164360:intron 70.0%
AGAGAGGGAGGGAGGGAGGG+AGG - chr1_4:43656886-43656905 Msa0164360:intron 70.0%
GAGAGGGAGGGAGGGAGGGA+GGG - chr1_4:43656887-43656906 Msa0164360:intron 70.0%
AGGGAGGGAGGGAGGGAGAG+AGG - chr1_4:43656894-43656913 Msa0164360:intron 70.0%
GGGAGGGAGGGAGGGAGAGA+GGG - chr1_4:43656895-43656914 Msa0164360:intron 70.0%
AGGGAGGGAGGGAGAGAGGG+AGG - chr1_4:43656898-43656917 Msa0164360:intron 70.0%
GGGAGGGAGGGAGAGAGGGA+GGG - chr1_4:43656899-43656918 Msa0164360:intron 70.0%
GGAGGGAGGGAGAGAGGGAG+GGG - chr1_4:43656900-43656919 Msa0164360:intron 70.0%
GAGGGAGGGAGAGAGGGAGG+GGG - chr1_4:43656901-43656920 Msa0164360:intron 70.0%
AGGGAGGGAGAGAGGGAGGG+GGG - chr1_4:43656902-43656921 Msa0164360:intron 70.0%
! GCCCACGAGGGTATGGGCCC+GGG + chr1_4:43642535-43642554 None:intergenic 75.0%
TGTGTGGGCATGGGGCGGGG+TGG - chr1_4:43642849-43642868 Msa0164360:intron 75.0%
GTGTGGGCATGGGGCGGGGT+GGG - chr1_4:43642850-43642869 Msa0164360:intron 75.0%
GGGAGGGAGAGAGGGAGGGG+GGG - chr1_4:43656903-43656922 Msa0164360:intron 75.0%
AGGGAGAGAGGGAGGGGGGG+AGG - chr1_4:43656906-43656925 Msa0164360:intron 75.0%
GGGAGAGAGGGAGGGGGGGA+GGG - chr1_4:43656907-43656926 Msa0164360:intron 75.0%
GGAGAGAGGGAGGGGGGGAG+GGG - chr1_4:43656908-43656927 Msa0164360:intron 75.0%
GAGAGAGGGAGGGGGGGAGG+GGG - chr1_4:43656909-43656928 Msa0164360:intron 75.0%
AGAGAGGGAGGGGGGGAGGG+GGG - chr1_4:43656910-43656929 Msa0164360:intron 75.0%
GGGAGGGAGGGAGGGAGGGA+GGG - chr1_4:43656891-43656910 Msa0164360:intron 75.0%
AGGGAGGGAGGGAGGGAGGG+AGG - chr1_4:43656890-43656909 Msa0164360:intron 75.0%
! GAGAGGGAGGGGGGGAGGGG+GGG - chr1_4:43656911-43656930 Msa0164360:intron 80.0%
! GGGAGGGGGGGAGGGAGGGA+GGG - chr1_4:43656923-43656942 Msa0164360:intron 80.0%
! AGGGGGGGAGGGAGGGAGGG+AGG - chr1_4:43656926-43656945 Msa0164360:intron 80.0%
! GGGGGGGAGGGAGGGAGGGA+GGG - chr1_4:43656927-43656946 Msa0164360:intron 80.0%
! GGGGAGGGAGGGAGGGAGGG+AGG - chr1_4:43656930-43656949 Msa0164360:intron 80.0%
! AGGGAGGGGGGGAGGGGGGG+AGG - chr1_4:43656914-43656933 Msa0164360:intron 85.0%
! GGGAGGGGGGGAGGGGGGGA+GGG - chr1_4:43656915-43656934 Msa0164360:intron 85.0%
! AGGGGGGGAGGGGGGGAGGG+AGG - chr1_4:43656918-43656937 Msa0164360:intron 85.0%
! GGGGGGGAGGGGGGGAGGGA+GGG - chr1_4:43656919-43656938 Msa0164360:intron 85.0%
! GGGGAGGGGGGGAGGGAGGG+AGG - chr1_4:43656922-43656941 Msa0164360:intron 85.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 43641734 43658822 43641734 ID=Msa0164360;Name=Msa0164360
chr1_4 mRNA 43641734 43658822 43641734 ID=Msa0164360-mRNA-1;Parent=Msa0164360;Name=Msa0164360-mRNA-1;_AED=0.24;_eAED=0.24;_QI=164|1|1|1|0.8|0.63|11|1829|582
chr1_4 exon 43641734 43642589 43641734 ID=Msa0164360-mRNA-1:exon:12516;Parent=Msa0164360-mRNA-1
chr1_4 exon 43642937 43643083 43642937 ID=Msa0164360-mRNA-1:exon:12515;Parent=Msa0164360-mRNA-1
chr1_4 exon 43643170 43643309 43643170 ID=Msa0164360-mRNA-1:exon:12514;Parent=Msa0164360-mRNA-1
chr1_4 exon 43643884 43644291 43643884 ID=Msa0164360-mRNA-1:exon:12513;Parent=Msa0164360-mRNA-1
chr1_4 exon 43644788 43645039 43644788 ID=Msa0164360-mRNA-1:exon:12512;Parent=Msa0164360-mRNA-1
chr1_4 exon 43646899 43647620 43646899 ID=Msa0164360-mRNA-1:exon:12511;Parent=Msa0164360-mRNA-1
chr1_4 exon 43648027 43648173 43648027 ID=Msa0164360-mRNA-1:exon:12510;Parent=Msa0164360-mRNA-1
chr1_4 exon 43648267 43648406 43648267 ID=Msa0164360-mRNA-1:exon:12509;Parent=Msa0164360-mRNA-1
chr1_4 exon 43648798 43649205 43648798 ID=Msa0164360-mRNA-1:exon:12508;Parent=Msa0164360-mRNA-1
chr1_4 exon 43650449 43650859 43650449 ID=Msa0164360-mRNA-1:exon:12507;Parent=Msa0164360-mRNA-1
chr1_4 exon 43658712 43658822 43658712 ID=Msa0164360-mRNA-1:exon:12506;Parent=Msa0164360-mRNA-1
chr1_4 five_prime_UTR 43658712 43658822 43658712 ID=Msa0164360-mRNA-1:five_prime_utr;Parent=Msa0164360-mRNA-1
chr1_4 five_prime_UTR 43650807 43650859 43650807 ID=Msa0164360-mRNA-1:five_prime_utr;Parent=Msa0164360-mRNA-1
chr1_4 CDS 43650449 43650806 43650449 ID=Msa0164360-mRNA-1:cds;Parent=Msa0164360-mRNA-1
chr1_4 CDS 43648798 43649205 43648798 ID=Msa0164360-mRNA-1:cds;Parent=Msa0164360-mRNA-1
chr1_4 CDS 43648267 43648406 43648267 ID=Msa0164360-mRNA-1:cds;Parent=Msa0164360-mRNA-1
chr1_4 CDS 43648027 43648173 43648027 ID=Msa0164360-mRNA-1:cds;Parent=Msa0164360-mRNA-1
chr1_4 CDS 43646925 43647620 43646925 ID=Msa0164360-mRNA-1:cds;Parent=Msa0164360-mRNA-1
chr1_4 three_prime_UTR 43646899 43646924 43646899 ID=Msa0164360-mRNA-1:three_prime_utr;Parent=Msa0164360-mRNA-1
chr1_4 three_prime_UTR 43644788 43645039 43644788 ID=Msa0164360-mRNA-1:three_prime_utr;Parent=Msa0164360-mRNA-1
chr1_4 three_prime_UTR 43643884 43644291 43643884 ID=Msa0164360-mRNA-1:three_prime_utr;Parent=Msa0164360-mRNA-1
chr1_4 three_prime_UTR 43643170 43643309 43643170 ID=Msa0164360-mRNA-1:three_prime_utr;Parent=Msa0164360-mRNA-1
chr1_4 three_prime_UTR 43642937 43643083 43642937 ID=Msa0164360-mRNA-1:three_prime_utr;Parent=Msa0164360-mRNA-1
chr1_4 three_prime_UTR 43641734 43642589 43641734 ID=Msa0164360-mRNA-1:three_prime_utr;Parent=Msa0164360-mRNA-1
Gene Sequence

>Msa0164360

ATGGCACCAAAGTTAGCGAAATCAGGATCATTTCGTTATACTTTAGCTGAGAAAAAGGAAAGACTTCTATCCATGAAGGGTGGTGATCATCATGGTTATTCTCGTATAGGAAATGGTTTGCTACAAGAACAAGAGGAGGAATCTAAGATGGTCAAGTTCAAAAAGATGATGAAGCTCGTTGCTGAAAAAGCATGGGAAATGGGTCGTTCTGATCCAAGGAAGATCATTTTTGCTGCTAAAATGGGTCTTGCTTTGGCCCTTATCTCCCTTTTGATTTTTCTTAAAGAACCCTTCGATTTTAGCCGTCACTCTGTTTGGGCTATTCTCACCGTCGTCGTCGTCTTTGAATTCAGTATAGGGGCAACTCTGAACAGAGGGTTTAACAGAGGATTAGGGACATTGTCAGCTGGAGGACTTGCTGTCGGAATGGGAGAGTTATCAGCATTGGCAGGAGAATGGGAAGAAGTTATAGTGATTATCAGTACATTCATTGTTGGATTTTGTATTACATATGCAAAATTGTACCCAACTTTGAAGCCTTATGAATATGGGTTCCGTGTGTTCTTGATTACTTATTGCTACATTACGGTATCTGGTTATCATAGTGGCGAATTTCTTGATACATCTATAAGTAGATTTTTGCTCATTGCACTTGGTGCTGCTGTATCTTTGGGAGTTAATATCTGCATATATCCTATCTGGGCTGGAGAGGATTTACATAATCTTTTGATAAAAAATTTCACGGGTGTTGCAACATCTTTGGAAGGGGTCGTAAATCACTACCTTAATTGTGTAGAATACAAGAAGGTGCCATCCAAAATTCTGACTTACCAAGCTGCTGCTGATGACCCAGTTTACAGTGGCTACAGATCAGCTGTTGAATCTACAAGTAAAGAGGACTCATTGTTGGGATTTGCTGTGTGGGAACCACCTCATGGTAAATACAAAATGCTTAACTATCCATGGAAGAATTATGTCAAAGTAAGCGGGGCTCTAAGACATTGTGCATTCATGGTCATGGCTATGCATGGATGCATACTTTCTGAAATTCAGGCTCCAGCTGAGAAGAGACATGTTTTCCTCAATGAGCTTAAGAGGGTAGGTTCCGAAGGAGCAAGAGTGTTGCGCGAACTTGGAAACAAAGTAAAAAAGATGGAGAAACTAGACAGAGGAGATTTGCTGTTTGATGTACACGAGGCAGCAGAAGAATTACAACAAAAGATCGATAAAAAATCTTACCTCCTTGTAAACTCAGAGTTCTGGGAGATCGGAAACCGTCCAAGAGATGAAAGTAATGATGATCATCCTAAAGGCCTATTTCACATGGATGAAGATAGAAAATTCCTAGAGTACAAGTCTCTAAGTGAAGCTGTACTTGATCTAAGATCAATTGAAGTTCAAAACAATTGGGATGAAAAAACTACAGATAATAATAGTAATAACCATGCTGTGCCTCCTATTGCCAATGAAAACATGCTTGTGAAACAAATGTCTTGGCCTGCTCATGTTTACTACAAACCAGAAGTCAAAGCAAAAGAGGAAGAATCAAAAACTTATGAAAGTGCTAGTTCGTTGTCTCTAACGACATTTACATCACTTCTGATAGAATTTGTAGCAAGGCTTCAAAATTTAGTGGACTCATTTGAAGAATTGGGTGAGAAAGCTAACTTTAAGGACCCCCTTGAACAGCAAGACGCGGTGGCCTCTGGCGGGTTTTGGACAAAATTGTTTAACTACTTCAAATCCTAG
Protein sequence

>Msa0164360

MAPKLAKSGSFRYTLAEKKERLLSMKGGDHHGYSRIGNGLLQEQEEESKMVKFKKMMKLVAEKAWEMGRSDPRKIIFAAKMGLALALISLLIFLKEPFDFSRHSVWAILTVVVVFEFSIGATLNRGFNRGLGTLSAGGLAVGMGELSALAGEWEEVIVIISTFIVGFCITYAKLYPTLKPYEYGFRVFLITYCYITVSGYHSGEFLDTSISRFLLIALGAAVSLGVNICIYPIWAGEDLHNLLIKNFTGVATSLEGVVNHYLNCVEYKKVPSKILTYQAAADDPVYSGYRSAVESTSKEDSLLGFAVWEPPHGKYKMLNYPWKNYVKVSGALRHCAFMVMAMHGCILSEIQAPAEKRHVFLNELKRVGSEGARVLRELGNKVKKMEKLDRGDLLFDVHEAAEELQQKIDKKSYLLVNSEFWEIGNRPRDESNDDHPKGLFHMDEDRKFLEYKSLSEAVLDLRSIEVQNNWDEKTTDNNSNNHAVPPIANENMLVKQMSWPAHVYYKPEVKAKEEESKTYESASSLSLTTFTSLLIEFVARLQNLVDSFEELGEKANFKDPLEQQDAVASGGFWTKLFNYFKS*