Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1154070 | XP_003623634.1 | 91.156 | 294 | 15 | 2 | 1 | 283 | 1 | 294 | 0.0 | 548 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1154070 | sp|K4BIZ9|WRK70_SOLLC | 41.209 | 182 | 91 | 5 | 14 | 189 | 12 | 183 | 1.44e-37 | 137 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1154070 | G7KY64 | 91.156 | 294 | 15 | 2 | 1 | 283 | 1 | 294 | 0.0 | 548 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1154070 | TF | WRKY |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0054240 | Msa1154070 | 0.843353 | 1.475961e-58 | -8.615850e-47 |
| Msa0054310 | Msa1154070 | 0.817853 | 2.658772e-52 | -8.615850e-47 |
| Msa0054330 | Msa1154070 | 0.838876 | 2.216144e-57 | -8.615850e-47 |
| Msa0055710 | Msa1154070 | 0.813104 | 3.030161e-51 | -8.615850e-47 |
| Msa0085290 | Msa1154070 | 0.829615 | 4.661622e-55 | -8.615850e-47 |
| Msa0088550 | Msa1154070 | 0.817731 | 2.832367e-52 | -8.615850e-47 |
| Msa0094100 | Msa1154070 | 0.802372 | 5.789496e-49 | -8.615850e-47 |
| Msa0100070 | Msa1154070 | 0.857113 | 2.036357e-62 | -8.615850e-47 |
| Msa0101810 | Msa1154070 | -0.813320 | 2.716435e-51 | -8.615850e-47 |
| Msa0607180 | Msa1154070 | 0.835209 | 1.916975e-56 | -8.615850e-47 |
| Msa0620790 | Msa1154070 | 0.803954 | 2.724438e-49 | -8.615850e-47 |
| Msa0623080 | Msa1154070 | 0.843911 | 1.047087e-58 | -8.615850e-47 |
| Msa0626280 | Msa1154070 | 0.806843 | 6.757069e-50 | -8.615850e-47 |
| Msa0647360 | Msa1154070 | 0.833683 | 4.631728e-56 | -8.615850e-47 |
| Msa0653020 | Msa1154070 | 0.812276 | 4.599558e-51 | -8.615850e-47 |
| Msa0658570 | Msa1154070 | 0.820743 | 5.837624e-53 | -8.615850e-47 |
| Msa0686850 | Msa1154070 | 0.834966 | 2.207456e-56 | -8.615850e-47 |
| Msa0689010 | Msa1154070 | 0.824355 | 8.441252e-54 | -8.615850e-47 |
| Msa0690440 | Msa1154070 | 0.804180 | 2.444146e-49 | -8.615850e-47 |
| Msa0696740 | Msa1154070 | 0.859035 | 5.462660e-63 | -8.615850e-47 |
| Msa0696770 | Msa1154070 | 0.861819 | 7.845518e-64 | -8.615850e-47 |
| Msa0703490 | Msa1154070 | 0.816607 | 5.069528e-52 | -8.615850e-47 |
| Msa0715720 | Msa1154070 | 0.818682 | 1.725689e-52 | -8.615850e-47 |
| Msa0722930 | Msa1154070 | 0.800254 | 1.571103e-48 | -8.615850e-47 |
| Msa0730270 | Msa1154070 | 0.820007 | 8.610769e-53 | -8.615850e-47 |
| Msa0733200 | Msa1154070 | 0.820545 | 6.480970e-53 | -8.615850e-47 |
| Msa0736060 | Msa1154070 | 0.800035 | 1.740688e-48 | -8.615850e-47 |
| Msa0770580 | Msa1154070 | 0.806060 | 9.880528e-50 | -8.615850e-47 |
| Msa0773610 | Msa1154070 | 0.810648 | 1.038198e-50 | -8.615850e-47 |
| Msa0777930 | Msa1154070 | 0.819656 | 1.035921e-52 | -8.615850e-47 |
| Msa0802470 | Msa1154070 | -0.801629 | 8.226383e-49 | -8.615850e-47 |
| Msa0813200 | Msa1154070 | 0.814765 | 1.304217e-51 | -8.615850e-47 |
| Msa0124110 | Msa1154070 | 0.853569 | 2.191320e-61 | -8.615850e-47 |
| Msa0135360 | Msa1154070 | 0.812320 | 4.498117e-51 | -8.615850e-47 |
| Msa0141230 | Msa1154070 | 0.861919 | 7.312777e-64 | -8.615850e-47 |
| Msa0148720 | Msa1154070 | 0.809696 | 1.665491e-50 | -8.615850e-47 |
| Msa0165430 | Msa1154070 | 0.815427 | 9.297176e-52 | -8.615850e-47 |
| Msa0173990 | Msa1154070 | 0.828959 | 6.726064e-55 | -8.615850e-47 |
| Msa0179860 | Msa1154070 | 0.809542 | 1.797430e-50 | -8.615850e-47 |
| Msa0185640 | Msa1154070 | -0.807127 | 5.882190e-50 | -8.615850e-47 |
| Msa0197660 | Msa1154070 | 0.801345 | 9.409539e-49 | -8.615850e-47 |
| Msa0201330 | Msa1154070 | 0.844237 | 8.563233e-59 | -8.615850e-47 |
| Msa0201370 | Msa1154070 | 0.863246 | 2.854888e-64 | -8.615850e-47 |
| Msa0201390 | Msa1154070 | 0.821485 | 3.938466e-53 | -8.615850e-47 |
| Msa0202750 | Msa1154070 | 0.824017 | 1.013369e-53 | -8.615850e-47 |
| Msa0212310 | Msa1154070 | 0.849796 | 2.569131e-60 | -8.615850e-47 |
| Msa0217400 | Msa1154070 | 0.807683 | 4.483942e-50 | -8.615850e-47 |
| Msa0223410 | Msa1154070 | -0.800217 | 1.598222e-48 | -8.615850e-47 |
| Msa0371570 | Msa1154070 | 0.819666 | 1.030184e-52 | -8.615850e-47 |
| Msa0399210 | Msa1154070 | 0.800126 | 1.668319e-48 | -8.615850e-47 |
| Msa0419990 | Msa1154070 | 0.806878 | 6.642843e-50 | -8.615850e-47 |
| Msa0425890 | Msa1154070 | 0.805987 | 1.023844e-49 | -8.615850e-47 |
| Msa0426110 | Msa1154070 | 0.843472 | 1.372475e-58 | -8.615850e-47 |
| Msa0448550 | Msa1154070 | -0.820452 | 6.808569e-53 | -8.615850e-47 |
| Msa0466390 | Msa1154070 | 0.816496 | 5.367787e-52 | -8.615850e-47 |
| Msa0472330 | Msa1154070 | 0.800716 | 1.265144e-48 | -8.615850e-47 |
| Msa0992350 | Msa1154070 | 0.817996 | 2.467582e-52 | -8.615850e-47 |
| Msa0996130 | Msa1154070 | 0.842342 | 2.742555e-58 | -8.615850e-47 |
| Msa1008490 | Msa1154070 | 0.801143 | 1.034635e-48 | -8.615850e-47 |
| Msa1026500 | Msa1154070 | 0.991916 | 2.949797e-190 | -8.615850e-47 |
| Msa1026510 | Msa1154070 | 0.881517 | 2.247540e-70 | -8.615850e-47 |
| Msa1029090 | Msa1154070 | 0.890843 | 6.827727e-74 | -8.615850e-47 |
| Msa1043830 | Msa1154070 | 0.801769 | 7.701903e-49 | -8.615850e-47 |
| Msa1044090 | Msa1154070 | 0.821554 | 3.796514e-53 | -8.615850e-47 |
| Msa1055430 | Msa1154070 | 0.816394 | 5.657373e-52 | -8.615850e-47 |
| Msa1073070 | Msa1154070 | -0.806899 | 6.573184e-50 | -8.615850e-47 |
| Msa1074570 | Msa1154070 | 0.956935 | 9.080737e-115 | -8.615850e-47 |
| Msa1074580 | Msa1154070 | 0.871287 | 7.667804e-67 | -8.615850e-47 |
| Msa1082500 | Msa1154070 | 0.806121 | 9.592592e-50 | -8.615850e-47 |
| Msa1098560 | Msa1154070 | 0.817767 | 2.779487e-52 | -8.615850e-47 |
| Msa0243910 | Msa1154070 | 0.829627 | 4.630910e-55 | -8.615850e-47 |
| Msa0243930 | Msa1154070 | 0.854655 | 1.065026e-61 | -8.615850e-47 |
| Msa0243940 | Msa1154070 | 0.816094 | 6.600057e-52 | -8.615850e-47 |
| Msa0245880 | Msa1154070 | 0.857053 | 2.120125e-62 | -8.615850e-47 |
| Msa0265820 | Msa1154070 | 0.810732 | 9.959285e-51 | -8.615850e-47 |
| Msa0266000 | Msa1154070 | -0.811684 | 6.189053e-51 | -8.615850e-47 |
| Msa0270440 | Msa1154070 | -0.802859 | 4.593953e-49 | -8.615850e-47 |
| Msa0282590 | Msa1154070 | 0.857739 | 1.329416e-62 | -8.615850e-47 |
| Msa0282600 | Msa1154070 | 0.836805 | 7.545344e-57 | -8.615850e-47 |
| Msa0311580 | Msa1154070 | 0.805882 | 1.077276e-49 | -8.615850e-47 |
| Msa0317510 | Msa1154070 | 0.805001 | 1.647688e-49 | -8.615850e-47 |
| Msa0331920 | Msa1154070 | 0.808877 | 2.495017e-50 | -8.615850e-47 |
| Msa0333720 | Msa1154070 | -0.800463 | 1.424397e-48 | -8.615850e-47 |
| Msa0335040 | Msa1154070 | 0.812582 | 3.942990e-51 | -8.615850e-47 |
| Msa0338110 | Msa1154070 | 0.804406 | 2.193582e-49 | -8.615850e-47 |
| Msa0340450 | Msa1154070 | 0.821183 | 4.623805e-53 | -8.615850e-47 |
| Msa0342340 | Msa1154070 | -0.808312 | 3.293975e-50 | -8.615850e-47 |
| Msa0343590 | Msa1154070 | 0.807997 | 3.844903e-50 | -8.615850e-47 |
| Msa0356890 | Msa1154070 | -0.821764 | 3.393760e-53 | -8.615850e-47 |
| Msa0362740 | Msa1154070 | 0.848982 | 4.331331e-60 | -8.615850e-47 |
| Msa1107800 | Msa1154070 | 0.847215 | 1.331230e-59 | -8.615850e-47 |
| Msa1111750 | Msa1154070 | 0.887462 | 1.396856e-72 | -8.615850e-47 |
| Msa1111760 | Msa1154070 | 0.990779 | 2.784995e-184 | -8.615850e-47 |
| Msa1121660 | Msa1154070 | 0.867221 | 1.605200e-65 | -8.615850e-47 |
| Msa1135590 | Msa1154070 | 0.801569 | 8.462787e-49 | -8.615850e-47 |
| Msa1139240 | Msa1154070 | 0.803047 | 4.200672e-49 | -8.615850e-47 |
| Msa1154070 | Msa1154080 | 0.887485 | 1.368901e-72 | -8.615850e-47 |
| Msa1154070 | Msa1156180 | 0.893286 | 7.237737e-75 | -8.615850e-47 |
| Msa1154070 | Msa1177070 | 0.814949 | 1.187096e-51 | -8.615850e-47 |
| Msa1154070 | Msa1179120 | 0.864174 | 1.470137e-64 | -8.615850e-47 |
| Msa1154070 | Msa1205010 | -0.800483 | 1.410993e-48 | -8.615850e-47 |
| Msa1154070 | Msa1228210 | 0.822286 | 2.569460e-53 | -8.615850e-47 |
| Msa1154070 | Msa1244250 | 0.801770 | 7.696253e-49 | -8.615850e-47 |
| Msa1154070 | Msa1249940 | 0.840701 | 7.419822e-58 | -8.615850e-47 |
| Msa1154070 | Msa1256540 | -0.809156 | 2.174455e-50 | -8.615850e-47 |
| Msa1154070 | Msa1261470 | 0.815304 | 9.900052e-52 | -8.615850e-47 |
| Msa1154070 | Msa1271280 | 0.816027 | 6.831235e-52 | -8.615850e-47 |
| Msa1154070 | Msa1271290 | 0.810257 | 1.260836e-50 | -8.615850e-47 |
| Msa1154070 | Msa1271300 | 0.815522 | 8.853478e-52 | -8.615850e-47 |
| Msa1154070 | Msa1278840 | 0.802537 | 5.351383e-49 | -8.615850e-47 |
| Msa1154070 | Msa1284140 | 0.804703 | 1.902280e-49 | -8.615850e-47 |
| Msa1154070 | Msa1289280 | 0.803796 | 2.938566e-49 | -8.615850e-47 |
| Msa1154070 | Msa1296960 | -0.804728 | 1.879422e-49 | -8.615850e-47 |
| Msa1154070 | Msa1304180 | 0.809212 | 2.115530e-50 | -8.615850e-47 |
| Msa1154070 | Msa1308380 | 0.822849 | 1.900597e-53 | -8.615850e-47 |
| Msa1154070 | Msa1314170 | 0.838990 | 2.070382e-57 | -8.615850e-47 |
| Msa1154070 | Msa1316980 | 0.814944 | 1.190522e-51 | -8.615850e-47 |
| Msa1154070 | Msa1335770 | 0.819689 | 1.017668e-52 | -8.615850e-47 |
| Msa1154070 | Msa1358960 | 0.802994 | 4.307775e-49 | -8.615850e-47 |
| Msa1154070 | Msa1363890 | 0.808666 | 2.769142e-50 | -8.615850e-47 |
| Msa1154070 | Msa1376890 | 0.812490 | 4.129197e-51 | -8.615850e-47 |
| Msa1154070 | Msa1381940 | 0.862519 | 4.784499e-64 | -8.615850e-47 |
| Msa1154070 | Msa1411090 | 0.804339 | 2.265524e-49 | -8.615850e-47 |
| Msa1154070 | Msa1431430 | 0.800115 | 1.676441e-48 | -8.615850e-47 |
| Msa1154070 | Msa1447440 | 0.817677 | 2.913684e-52 | -8.615850e-47 |
| Msa1154070 | Msa1454000 | 0.823975 | 1.036917e-53 | -8.615850e-47 |
| Msa0483650 | Msa1154070 | 0.801316 | 9.534947e-49 | -8.615850e-47 |
| Msa0487360 | Msa1154070 | 0.805117 | 1.558375e-49 | -8.615850e-47 |
| Msa0517330 | Msa1154070 | 0.802347 | 5.856399e-49 | -8.615850e-47 |
| Msa0524890 | Msa1154070 | -0.841808 | 3.796757e-58 | -8.615850e-47 |
| Msa0528970 | Msa1154070 | 0.800283 | 1.550102e-48 | -8.615850e-47 |
| Msa0533290 | Msa1154070 | 0.803194 | 3.915739e-49 | -8.615850e-47 |
| Msa0553460 | Msa1154070 | 0.805202 | 1.495726e-49 | -8.615850e-47 |
| Msa0555020 | Msa1154070 | 0.800443 | 1.437756e-48 | -8.615850e-47 |
| Msa0558690 | Msa1154070 | 0.812846 | 3.452596e-51 | -8.615850e-47 |
| Msa0559010 | Msa1154070 | 0.812990 | 3.209394e-51 | -8.615850e-47 |
| Msa0559250 | Msa1154070 | 0.834543 | 2.819867e-56 | -8.615850e-47 |
| Msa0567020 | Msa1154070 | 0.812497 | 4.116130e-51 | -8.615850e-47 |
| Msa0882010 | Msa1154070 | 0.807380 | 5.198774e-50 | -8.615850e-47 |
| Msa0885100 | Msa1154070 | 0.805246 | 1.464255e-49 | -8.615850e-47 |
| Msa0885130 | Msa1154070 | 0.808026 | 3.791756e-50 | -8.615850e-47 |
| Msa0896300 | Msa1154070 | 0.800837 | 1.194763e-48 | -8.615850e-47 |
| Msa0946680 | Msa1154070 | 0.837793 | 4.213688e-57 | -8.615850e-47 |
| Msa0951720 | Msa1154070 | 0.814529 | 1.470962e-51 | -8.615850e-47 |
| Msa0956390 | Msa1154070 | 0.819941 | 8.916756e-53 | -8.615850e-47 |
| Msa0961420 | Msa1154070 | -0.818815 | 1.610107e-52 | -8.615850e-47 |
| Msa0961490 | Msa1154070 | 0.822774 | 1.979187e-53 | -8.615850e-47 |
| Msa0964130 | Msa1154070 | 0.849948 | 2.329249e-60 | -8.615850e-47 |
| Msa0965520 | Msa1154070 | 0.800904 | 1.157980e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1154070 | MtrunA17_Chr7g0244971 | 91.156 | 294 | 15 | 2 | 1 | 283 | 1 | 294 | 0.0 | 548 |
| Msa1154070 | MtrunA17_Chr7g0244981 | 87.719 | 285 | 31 | 4 | 1 | 283 | 1 | 283 | 0.0 | 506 |
| Msa1154070 | MtrunA17_Chr8g0350621 | 40.458 | 262 | 131 | 6 | 13 | 264 | 5 | 251 | 1.56e-60 | 192 |
| Msa1154070 | MtrunA17_Chr8g0334541 | 48.077 | 208 | 94 | 5 | 14 | 220 | 4 | 198 | 1.55e-57 | 186 |
| Msa1154070 | MtrunA17_Chr2g0315371 | 39.683 | 252 | 118 | 8 | 11 | 231 | 12 | 260 | 5.29e-49 | 164 |
| Msa1154070 | MtrunA17_Chr2g0315381 | 41.152 | 243 | 115 | 5 | 17 | 231 | 17 | 259 | 8.98e-45 | 154 |
| Msa1154070 | MtrunA17_Chr2g0315361 | 37.838 | 259 | 123 | 6 | 11 | 233 | 12 | 268 | 6.63e-42 | 146 |
| Msa1154070 | MtrunA17_Chr5g0428351 | 39.407 | 236 | 108 | 12 | 5 | 238 | 81 | 283 | 2.47e-38 | 137 |
| Msa1154070 | MtrunA17_Chr3g0128671 | 41.530 | 183 | 86 | 6 | 21 | 191 | 23 | 196 | 3.75e-38 | 136 |
| Msa1154070 | MtrunA17_Chr8g0350631 | 68.831 | 77 | 23 | 1 | 144 | 220 | 5 | 80 | 2.12e-31 | 114 |
| Msa1154070 | MtrunA17_Chr7g0275531 | 31.980 | 197 | 106 | 4 | 12 | 195 | 9 | 190 | 1.07e-26 | 106 |
| Msa1154070 | MtrunA17_Chr3g0126391 | 33.503 | 197 | 95 | 5 | 15 | 184 | 7 | 194 | 1.36e-26 | 106 |
| Msa1154070 | MtrunA17_Chr8g0347251 | 51.765 | 85 | 33 | 1 | 106 | 182 | 111 | 195 | 3.26e-23 | 97.4 |
| Msa1154070 | MtrunA17_Chr8g0387981 | 31.863 | 204 | 104 | 7 | 1 | 182 | 1 | 191 | 3.49e-21 | 92.0 |
| Msa1154070 | MtrunA17_Chr8g0350641 | 33.088 | 136 | 82 | 4 | 14 | 143 | 7 | 139 | 1.77e-15 | 71.6 |
| Msa1154070 | MtrunA17_Chr5g0431811 | 46.875 | 64 | 34 | 0 | 121 | 184 | 670 | 733 | 1.45e-14 | 73.9 |
| Msa1154070 | MtrunA17_Chr7g0224801 | 51.667 | 60 | 26 | 1 | 122 | 181 | 92 | 148 | 1.48e-14 | 70.1 |
| Msa1154070 | MtrunA17_Chr2g0315401 | 55.000 | 60 | 26 | 1 | 151 | 209 | 19 | 78 | 1.63e-14 | 69.3 |
| Msa1154070 | MtrunA17_Chr8g0383351 | 40.964 | 83 | 39 | 3 | 98 | 180 | 142 | 214 | 2.47e-13 | 68.2 |
| Msa1154070 | MtrunA17_Chr8g0386241 | 35.088 | 114 | 68 | 3 | 76 | 189 | 59 | 166 | 8.78e-13 | 65.5 |
| Msa1154070 | MtrunA17_Chr7g0270831 | 35.345 | 116 | 72 | 2 | 66 | 180 | 158 | 271 | 1.33e-12 | 67.4 |
| Msa1154070 | MtrunA17_Chr3g0129361 | 41.176 | 85 | 37 | 3 | 98 | 181 | 127 | 199 | 3.26e-12 | 64.7 |
| Msa1154070 | MtrunA17_Chr1g0194481 | 46.667 | 60 | 29 | 1 | 122 | 181 | 157 | 213 | 3.34e-12 | 65.9 |
| Msa1154070 | MtrunA17_Chr5g0418781 | 47.458 | 59 | 28 | 1 | 122 | 180 | 123 | 178 | 3.85e-12 | 65.1 |
| Msa1154070 | MtrunA17_Chr8g0335811 | 33.813 | 139 | 62 | 6 | 73 | 205 | 113 | 227 | 4.07e-12 | 64.3 |
| Msa1154070 | MtrunA17_Chr2g0322391 | 34.579 | 107 | 67 | 2 | 98 | 204 | 325 | 428 | 4.08e-12 | 66.2 |
| Msa1154070 | MtrunA17_Chr7g0270191 | 46.667 | 60 | 29 | 1 | 122 | 181 | 144 | 200 | 9.70e-12 | 64.3 |
| Msa1154070 | MtrunA17_Chr3g0099641 | 36.364 | 99 | 60 | 2 | 106 | 204 | 235 | 330 | 1.26e-11 | 64.7 |
| Msa1154070 | MtrunA17_Chr4g0051881 | 47.458 | 59 | 28 | 1 | 122 | 180 | 177 | 232 | 2.77e-11 | 63.2 |
| Msa1154070 | MtrunA17_Chr5g0443131 | 45.763 | 59 | 29 | 1 | 122 | 180 | 156 | 211 | 2.85e-11 | 62.8 |
| Msa1154070 | MtrunA17_Chr8g0348311 | 39.744 | 78 | 43 | 2 | 106 | 181 | 136 | 211 | 3.81e-11 | 62.8 |
| Msa1154070 | MtrunA17_Chr2g0315341 | 56.863 | 51 | 21 | 1 | 160 | 209 | 2 | 52 | 4.09e-11 | 59.3 |
| Msa1154070 | MtrunA17_Chr4g0068541 | 37.838 | 74 | 42 | 2 | 108 | 180 | 192 | 262 | 7.63e-11 | 62.0 |
| Msa1154070 | MtrunA17_Chr2g0294231 | 43.333 | 60 | 31 | 1 | 122 | 181 | 202 | 258 | 9.56e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1154070 | AT3G56400.1 | 41.758 | 182 | 81 | 5 | 14 | 182 | 10 | 179 | 3.38e-37 | 134 |
| Msa1154070 | AT2G40750.1 | 37.500 | 200 | 92 | 8 | 14 | 182 | 14 | 211 | 8.16e-28 | 110 |
| Msa1154070 | AT1G66550.1 | 34.158 | 202 | 112 | 7 | 14 | 212 | 8 | 191 | 1.28e-26 | 105 |
| Msa1154070 | AT2G46400.1 | 34.239 | 184 | 91 | 5 | 15 | 189 | 8 | 170 | 6.07e-26 | 104 |
| Msa1154070 | AT5G01900.1 | 34.392 | 189 | 96 | 5 | 10 | 187 | 3 | 174 | 3.96e-25 | 101 |
| Msa1154070 | AT1G66550.2 | 33.333 | 201 | 110 | 7 | 14 | 212 | 8 | 186 | 4.76e-25 | 100 |
| Msa1154070 | AT5G22570.1 | 32.432 | 185 | 103 | 5 | 14 | 191 | 9 | 178 | 4.57e-24 | 99.0 |
| Msa1154070 | AT4G11070.1 | 31.959 | 194 | 108 | 4 | 12 | 182 | 8 | 200 | 8.38e-23 | 95.9 |
| Msa1154070 | AT1G66560.1 | 33.721 | 172 | 98 | 5 | 15 | 185 | 9 | 165 | 5.40e-22 | 92.4 |
| Msa1154070 | AT1G66600.1 | 33.523 | 176 | 95 | 5 | 14 | 185 | 8 | 165 | 2.88e-21 | 90.5 |
| Msa1154070 | AT5G24110.1 | 33.333 | 180 | 83 | 4 | 16 | 182 | 17 | 172 | 1.60e-20 | 89.7 |
| Msa1154070 | AT2G40740.1 | 30.244 | 205 | 115 | 5 | 16 | 195 | 44 | 245 | 5.34e-20 | 87.8 |
| Msa1154070 | AT2G40740.3 | 30.244 | 205 | 115 | 5 | 16 | 195 | 53 | 254 | 6.96e-20 | 87.8 |
| Msa1154070 | AT4G11070.2 | 32.948 | 173 | 102 | 3 | 12 | 182 | 8 | 168 | 3.87e-19 | 85.5 |
| Msa1154070 | AT1G80590.1 | 36.522 | 115 | 65 | 2 | 124 | 233 | 86 | 197 | 6.28e-18 | 81.3 |
| Msa1154070 | AT4G23810.1 | 45.882 | 85 | 38 | 1 | 106 | 182 | 133 | 217 | 1.41e-17 | 81.6 |
| Msa1154070 | AT1G69310.4 | 37.097 | 124 | 71 | 4 | 69 | 188 | 89 | 209 | 1.43e-14 | 72.8 |
| Msa1154070 | AT1G69310.2 | 37.097 | 124 | 71 | 4 | 69 | 188 | 89 | 209 | 1.43e-14 | 72.8 |
| Msa1154070 | AT1G69310.1 | 37.097 | 124 | 71 | 4 | 69 | 188 | 89 | 209 | 1.43e-14 | 72.8 |
| Msa1154070 | AT5G45260.1 | 52.632 | 57 | 27 | 0 | 124 | 180 | 1209 | 1265 | 2.29e-13 | 70.9 |
| Msa1154070 | AT5G13080.1 | 45.070 | 71 | 36 | 1 | 122 | 192 | 66 | 133 | 1.22e-12 | 64.7 |
| Msa1154070 | AT5G41570.1 | 40.964 | 83 | 44 | 2 | 98 | 180 | 75 | 152 | 1.32e-12 | 65.5 |
| Msa1154070 | AT2G37260.1 | 45.833 | 72 | 35 | 2 | 117 | 188 | 344 | 411 | 2.04e-12 | 67.4 |
| Msa1154070 | AT2G37260.3 | 45.833 | 72 | 35 | 2 | 117 | 188 | 264 | 331 | 2.64e-12 | 66.6 |
| Msa1154070 | AT2G37260.2 | 45.833 | 72 | 35 | 2 | 117 | 188 | 262 | 329 | 2.74e-12 | 66.6 |
| Msa1154070 | AT5G49520.1 | 41.791 | 67 | 36 | 1 | 122 | 188 | 220 | 283 | 3.93e-12 | 66.2 |
| Msa1154070 | AT2G46130.1 | 45.763 | 59 | 29 | 1 | 122 | 180 | 29 | 84 | 4.75e-12 | 62.0 |
| Msa1154070 | AT1G64000.1 | 43.077 | 65 | 34 | 1 | 116 | 180 | 107 | 168 | 6.21e-12 | 63.9 |
| Msa1154070 | AT3G01970.1 | 38.202 | 89 | 44 | 2 | 122 | 210 | 64 | 141 | 8.10e-12 | 62.4 |
| Msa1154070 | AT4G04450.2 | 33.929 | 112 | 71 | 2 | 94 | 204 | 168 | 277 | 1.76e-11 | 64.7 |
| Msa1154070 | AT2G47260.1 | 46.667 | 60 | 29 | 1 | 122 | 181 | 173 | 229 | 2.02e-11 | 63.9 |
| Msa1154070 | AT4G04450.1 | 33.929 | 112 | 71 | 2 | 94 | 204 | 262 | 371 | 2.48e-11 | 64.3 |
| Msa1154070 | AT4G39410.1 | 38.542 | 96 | 44 | 4 | 93 | 188 | 201 | 281 | 2.48e-11 | 63.5 |
| Msa1154070 | AT2G44745.1 | 41.667 | 84 | 42 | 3 | 98 | 180 | 122 | 199 | 2.93e-11 | 62.4 |
| Msa1154070 | AT4G18170.1 | 36.538 | 104 | 54 | 4 | 80 | 180 | 132 | 226 | 3.32e-11 | 63.2 |
| Msa1154070 | AT1G62300.1 | 44.595 | 74 | 38 | 2 | 108 | 180 | 296 | 367 | 4.53e-11 | 63.5 |
| Msa1154070 | AT1G29860.1 | 44.444 | 63 | 32 | 1 | 122 | 184 | 135 | 194 | 5.54e-11 | 62.4 |
Find 74 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGATTGATGAATTGTTAAA+AGG | 0.184934 | 7_4:-41430931 | Msa1154070:CDS |
| TTCAAGAAAGTGGCCAATTA+AGG | 0.251647 | 7_4:+41428520 | None:intergenic |
| GGTGATATTGATAACATTAA+TGG | 0.251913 | 7_4:-41430865 | Msa1154070:CDS |
| TCCATTTCTCTCAGTGAAAA+AGG | 0.266907 | 7_4:-41428700 | Msa1154070:CDS |
| TGCTTTGCAGGAACTATTAC+AGG | 0.282092 | 7_4:-41428932 | Msa1154070:intron |
| CTGAGCTCTTGTATTATATA+GGG | 0.299186 | 7_4:+41431084 | None:intergenic |
| CAATATGATGTTGGCTCAAA+TGG | 0.300173 | 7_4:-41428371 | Msa1154070:three_prime_UTR |
| GATATGATTGTAGCTAGATT+TGG | 0.320624 | 7_4:-41428120 | Msa1154070:three_prime_UTR |
| GATTATTGTTCAAGAACAAT+AGG | 0.331883 | 7_4:+41430782 | None:intergenic |
| ACTGAGCTCTTGTATTATAT+AGG | 0.338023 | 7_4:+41431083 | None:intergenic |
| CAAGAGTACTTCCATTGTTA+AGG | 0.344618 | 7_4:-41430698 | Msa1154070:CDS |
| GGCTCAAATGGAACTGGACT+TGG | 0.346215 | 7_4:-41428359 | Msa1154070:three_prime_UTR |
| CTTTACAAAACAACCTACTA+TGG | 0.350539 | 7_4:-41428840 | Msa1154070:CDS |
| TGTATGATGATGTCCTTAAT+TGG | 0.353206 | 7_4:-41428533 | Msa1154070:CDS |
| TAATTCTCATTCACTTCAAA+TGG | 0.354743 | 7_4:+41428064 | None:intergenic |
| ACATCATCATACATGATATC+AGG | 0.372411 | 7_4:+41428543 | None:intergenic |
| TTTAAAAGATCTTCAGCAAC+TGG | 0.373083 | 7_4:+41430832 | None:intergenic |
| ATAAATATACCTTGGGAAAT+CGG | 0.385972 | 7_4:+41429326 | None:intergenic |
| CTCTAAAGAATCCTCAGATT+TGG | 0.392364 | 7_4:+41430729 | None:intergenic |
| TCTAATTAATTTCAAGAAAG+TGG | 0.395509 | 7_4:+41428510 | None:intergenic |
| GGTCATCAATGGAGAAAGTA+TGG | 0.401550 | 7_4:-41429369 | Msa1154070:CDS |
| CTTGATTCTCATGATCAGTT+AGG | 0.404590 | 7_4:-41428576 | Msa1154070:CDS |
| GGAGAATCCTCTATGATCTC+AGG | 0.407384 | 7_4:+41428789 | None:intergenic |
| CAGTCTTGTTTGGCTGGTGT+TGG | 0.412342 | 7_4:+41428723 | None:intergenic |
| ATTATTGTTCAAGAACAATA+GGG | 0.414455 | 7_4:+41430783 | None:intergenic |
| CCTTCAAATGATTACCTCTC+TGG | 0.419974 | 7_4:-41428645 | Msa1154070:CDS |
| GATGTTGGCTCAAATGGAAC+TGG | 0.431212 | 7_4:-41428365 | Msa1154070:three_prime_UTR |
| GAGAAATGGACAGTCTTGTT+TGG | 0.445787 | 7_4:+41428713 | None:intergenic |
| AGTCTTGTTTGGCTGGTGTT+GGG | 0.452762 | 7_4:+41428724 | None:intergenic |
| AGGTAATCATTTGAAGGAGG+AGG | 0.457187 | 7_4:+41428651 | None:intergenic |
| CCAGAGAGGTAATCATTTGA+AGG | 0.470477 | 7_4:+41428645 | None:intergenic |
| TGATTGATGAATTGTTAAAA+GGG | 0.474553 | 7_4:-41430930 | Msa1154070:CDS |
| CAGAAAAGTTTCACAAACAT+GGG | 0.477292 | 7_4:-41429421 | Msa1154070:CDS |
| AATGGACAGTCTTGTTTGGC+TGG | 0.477532 | 7_4:+41428717 | None:intergenic |
| AGAAATATTCTGAATGAAAG+TGG | 0.485810 | 7_4:-41430886 | Msa1154070:CDS |
| TCAGAAAAGTTTCACAAACA+TGG | 0.494934 | 7_4:-41429422 | Msa1154070:intron |
| CTAGCTCATGGTAGTGGTCG+TGG | 0.509082 | 7_4:-41430958 | Msa1154070:CDS |
| ACAAGTGTGATGGCCATAGT+AGG | 0.510474 | 7_4:+41428827 | None:intergenic |
| AACAATAATCCTACTTCTGA+GGG | 0.511593 | 7_4:-41430769 | Msa1154070:CDS |
| TCTGATCGTCCCGTGGAAGA+TGG | 0.520055 | 7_4:-41429390 | Msa1154070:CDS |
| AATCTTAGGAGGGTAGATAC+TGG | 0.522980 | 7_4:+41431008 | None:intergenic |
| GAAAATCTAGCTCATGGTAG+TGG | 0.526481 | 7_4:-41430964 | Msa1154070:CDS |
| CCGTGGAAGATGGTCATCAA+TGG | 0.528577 | 7_4:-41429380 | Msa1154070:CDS |
| AGCTAAGGAACATGGAAGAC+TGG | 0.529377 | 7_4:+41428760 | None:intergenic |
| GTAGAGGCTGTTACAAAAGA+AGG | 0.531049 | 7_4:-41430672 | Msa1154070:intron |
| AGAGAAGACTACACTAAAGA+TGG | 0.538967 | 7_4:-41428303 | Msa1154070:three_prime_UTR |
| GTTGTCAAAGCTAAGGAACA+TGG | 0.540400 | 7_4:+41428752 | None:intergenic |
| AAATCAGAGCCCTCAGAAGT+AGG | 0.544337 | 7_4:+41430760 | None:intergenic |
| GAACAATAATCCTACTTCTG+AGG | 0.546015 | 7_4:-41430770 | Msa1154070:CDS |
| TTTGGTATTGAAATCTTAGG+AGG | 0.546887 | 7_4:+41430997 | None:intergenic |
| GGAAAGAGTTGTCAAAGCTA+AGG | 0.561012 | 7_4:+41428745 | None:intergenic |
| ACTATGTAACAATATGATGT+TGG | 0.562103 | 7_4:-41428380 | Msa1154070:three_prime_UTR |
| TGCACTCACAAACATGATCA+AGG | 0.563442 | 7_4:-41428909 | Msa1154070:CDS |
| GAGAATCCTCTATGATCTCA+GGG | 0.568526 | 7_4:+41428790 | None:intergenic |
| GGACTTGGATTTGAACATTG+TGG | 0.570945 | 7_4:-41428344 | Msa1154070:three_prime_UTR |
| CCATTGATGACCATCTTCCA+CGG | 0.575191 | 7_4:+41429380 | None:intergenic |
| GCAAGATTCTACAAGTGTGA+TGG | 0.576779 | 7_4:+41428817 | None:intergenic |
| GCCTCTACGTTCCTTAACAA+TGG | 0.594370 | 7_4:+41430687 | None:intergenic |
| AGTTTCACAAACATGGGAGA+AGG | 0.598123 | 7_4:-41429415 | Msa1154070:CDS |
| TTGGTATTGAAATCTTAGGA+GGG | 0.600467 | 7_4:+41430998 | None:intergenic |
| ACAAGTGCAACAAATTCAAG+AGG | 0.601952 | 7_4:-41428871 | Msa1154070:CDS |
| AAAGTCGGTCAATATCATCA+TGG | 0.607816 | 7_4:-41428245 | Msa1154070:three_prime_UTR |
| AACATGGAAGACTGGTCACA+AGG | 0.611016 | 7_4:+41428768 | None:intergenic |
| CATTGATGACCATCTTCCAC+GGG | 0.612085 | 7_4:+41429381 | None:intergenic |
| ATATTAGTCATCAACAAAGT+CGG | 0.614924 | 7_4:-41428260 | Msa1154070:three_prime_UTR |
| TTTGCAACTCACCAAATCTG+AGG | 0.616026 | 7_4:-41430740 | Msa1154070:CDS |
| TGAGCTCTTGTATTATATAG+GGG | 0.620923 | 7_4:+41431085 | None:intergenic |
| GCAAAGCCCTGAGATCATAG+AGG | 0.632964 | 7_4:-41428796 | Msa1154070:CDS |
| TCTTGCACACCGATTTCCCA+AGG | 0.637507 | 7_4:-41429335 | Msa1154070:intron |
| GAGAGGTAATCATTTGAAGG+AGG | 0.645608 | 7_4:+41428648 | None:intergenic |
| TCCATTGTTAAGGAACGTAG+AGG | 0.656442 | 7_4:-41430688 | Msa1154070:CDS |
| GAAGGAGTCTGATCGTCCCG+TGG | 0.657169 | 7_4:-41429397 | Msa1154070:CDS |
| GCAAGATGTAGTACAACGAG+AGG | 0.666237 | 7_4:-41428206 | Msa1154070:three_prime_UTR |
| CATCAAAAGTGAGTCCAGAG+AGG | 0.707648 | 7_4:+41428631 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGATTTTCATTTTTCATTTT+TGG | + | chr7_4:41428160-41428179 | None:intergenic | 15.0% |
| !!! | CCAAAATTTTTCTTATAAAT+AGG | + | chr7_4:41428910-41428929 | None:intergenic | 15.0% |
| !!! | CCTATTTATAAGAAAAATTT+TGG | - | chr7_4:41428907-41428926 | Msa1154070:CDS | 15.0% |
| !! | AATGTATTTGGTTAAAAAAT+TGG | - | chr7_4:41428942-41428961 | Msa1154070:intron | 15.0% |
| !! | CAAAATAAATAAAAATGAGA+GGG | + | chr7_4:41429324-41429343 | None:intergenic | 15.0% |
| !! | ACAAAATAAATAAAAATGAG+AGG | + | chr7_4:41429325-41429344 | None:intergenic | 15.0% |
| !!! | TCTCATTTTTATTTATTTTG+TGG | - | chr7_4:41429324-41429343 | Msa1154070:intron | 15.0% |
| !!! | TTGTGTTTTTTTTTTTTTTG+TGG | - | chr7_4:41429545-41429564 | Msa1154070:intron | 15.0% |
| !! | TTAATTTCTTTACATCTTAA+AGG | - | chr7_4:41430019-41430038 | Msa1154070:intron | 15.0% |
| !!! | ATTTTTGGTATTGAAATCTT+AGG | + | chr7_4:41428145-41428164 | None:intergenic | 20.0% |
| !! | TGATTGATGAATTGTTAAAA+GGG | - | chr7_4:41428206-41428225 | Msa1154070:three_prime_UTR | 20.0% |
| !! | ATTATTGTTCAAGAACAATA+GGG | + | chr7_4:41428356-41428375 | None:intergenic | 20.0% |
| !! | AGTAAAAAAAGTTGAATATG+TGG | + | chr7_4:41428524-41428543 | None:intergenic | 20.0% |
| !! | GAAAAATCATAGGTTAAAAT+AGG | + | chr7_4:41428572-41428591 | None:intergenic | 20.0% |
| !! | TATAGAATTATAGATGTGTT+GGG | + | chr7_4:41428618-41428637 | None:intergenic | 20.0% |
| !! | ATATAGAATTATAGATGTGT+TGG | + | chr7_4:41428619-41428638 | None:intergenic | 20.0% |
| !!! | AATTTTAGATGTATGAAAAG+TGG | + | chr7_4:41428642-41428661 | None:intergenic | 20.0% |
| !!! | TTTTCCTTTTTTTTCTTCTT+CGG | - | chr7_4:41428712-41428731 | Msa1154070:CDS | 20.0% |
| !!! | TTATTTGAACTTTTAAGATG+AGG | - | chr7_4:41428822-41428841 | Msa1154070:CDS | 20.0% |
| !!! | ATTTTTCTTATAAATAGGAC+CGG | + | chr7_4:41428905-41428924 | None:intergenic | 20.0% |
| !! | TCAACAAAAGTTAATGTATT+TGG | - | chr7_4:41428930-41428949 | Msa1154070:intron | 20.0% |
| !! | CCTATTTATAAGAGAAATTT+GGG | + | chr7_4:41428992-41429011 | None:intergenic | 20.0% |
| !! | TCCTATTTATAAGAGAAATT+TGG | + | chr7_4:41428993-41429012 | None:intergenic | 20.0% |
| !! | ATATTACTCATATGTTGTAA+AGG | + | chr7_4:41429043-41429062 | None:intergenic | 20.0% |
| !! | TTACAACATATGAGTAATAT+TGG | - | chr7_4:41429043-41429062 | Msa1154070:intron | 20.0% |
| !! | TACAACATATGAGTAATATT+GGG | - | chr7_4:41429044-41429063 | Msa1154070:intron | 20.0% |
| !!! | TTTTGATGAGAGAAAATTAT+TGG | + | chr7_4:41429123-41429142 | None:intergenic | 20.0% |
| !! | ATGATGAACAATAATTGATA+GGG | + | chr7_4:41429251-41429270 | None:intergenic | 20.0% |
| !! | AAAAAACACAACAAAATAAG+AGG | + | chr7_4:41429536-41429555 | None:intergenic | 20.0% |
| !! | TGAAAAAGAATTGCATAATT+GGG | + | chr7_4:41429697-41429716 | None:intergenic | 20.0% |
| !! | GACAATCTTAAAAGTAAAAT+GGG | + | chr7_4:41429857-41429876 | None:intergenic | 20.0% |
| !! | TGACAATCTTAAAAGTAAAA+TGG | + | chr7_4:41429858-41429877 | None:intergenic | 20.0% |
| !! | TTCAAATAGTGAAATTTGAT+TGG | + | chr7_4:41429887-41429906 | None:intergenic | 20.0% |
| !!! | TAAAATGTTAAATGAGTTGA+AGG | - | chr7_4:41430066-41430085 | Msa1154070:intron | 20.0% |
| !! | TATTAAGAAAGAAGAATTAG+AGG | + | chr7_4:41430146-41430165 | None:intergenic | 20.0% |
| !! | TCTAATTAATTTCAAGAAAG+TGG | + | chr7_4:41430629-41430648 | None:intergenic | 20.0% |
| !! | AAAAATGAAAATCTAGCTCA+TGG | - | chr7_4:41428166-41428185 | Msa1154070:three_prime_UTR | 25.0% |
| ! | GTGATTGATGAATTGTTAAA+AGG | - | chr7_4:41428205-41428224 | Msa1154070:three_prime_UTR | 25.0% |
| ! | AGAAATATTCTGAATGAAAG+TGG | - | chr7_4:41428250-41428269 | Msa1154070:three_prime_UTR | 25.0% |
| !! | GGTGATATTGATAACATTAA+TGG | - | chr7_4:41428271-41428290 | Msa1154070:three_prime_UTR | 25.0% |
| ! | GATTATTGTTCAAGAACAAT+AGG | + | chr7_4:41428357-41428376 | None:intergenic | 25.0% |
| ! | TAGTGTGTATGAAAAATCAT+AGG | + | chr7_4:41428582-41428601 | None:intergenic | 25.0% |
| !! | TTTTTCATACACACTATTCA+TGG | - | chr7_4:41428586-41428605 | Msa1154070:CDS | 25.0% |
| ! | CCCAAATTTCTCTTATAAAT+AGG | - | chr7_4:41428989-41429008 | Msa1154070:intron | 25.0% |
| ! | ATTTCTCTTATAAATAGGAC+CGG | - | chr7_4:41428994-41429013 | Msa1154070:intron | 25.0% |
| ! | ACAACATATGAGTAATATTG+GGG | - | chr7_4:41429045-41429064 | Msa1154070:intron | 25.0% |
| !! | ATGAGAGAAAATTATTGGTT+AGG | + | chr7_4:41429118-41429137 | None:intergenic | 25.0% |
| !!! | GTGATTTTAGTGTATTTTAG+AGG | + | chr7_4:41429181-41429200 | None:intergenic | 25.0% |
| ! | GATGATGAACAATAATTGAT+AGG | + | chr7_4:41429252-41429271 | None:intergenic | 25.0% |
| !! | TTTCATAGTCTTACATTGAT+TGG | - | chr7_4:41429637-41429656 | Msa1154070:intron | 25.0% |
| !!! | GATTGGTTTTGAGTTTTTTT+TGG | - | chr7_4:41429654-41429673 | Msa1154070:intron | 25.0% |
| ! | CTGAAAAAGAATTGCATAAT+TGG | + | chr7_4:41429698-41429717 | None:intergenic | 25.0% |
| ! | ATAAATATACCTTGGGAAAT+CGG | + | chr7_4:41429813-41429832 | None:intergenic | 25.0% |
| ! | AACTCGTATAAATATACCTT+GGG | + | chr7_4:41429820-41429839 | None:intergenic | 25.0% |
| ! | AAACTCGTATAAATATACCT+TGG | + | chr7_4:41429821-41429840 | None:intergenic | 25.0% |
| ! | ATAGTGAAATTTGATTGGAT+TGG | + | chr7_4:41429882-41429901 | None:intergenic | 25.0% |
| ! | TGAATATTTATATGCTTTGC+AGG | - | chr7_4:41430192-41430211 | Msa1154070:intron | 25.0% |
| ! | ACTATGTAACAATATGATGT+TGG | - | chr7_4:41430756-41430775 | Msa1154070:CDS | 25.0% |
| ! | ATATTAGTCATCAACAAAGT+CGG | - | chr7_4:41430876-41430895 | Msa1154070:CDS | 25.0% |
| ! | TAATTCTCATTCACTTCAAA+TGG | + | chr7_4:41431075-41431094 | None:intergenic | 25.0% |
| TGAGCTCTTGTATTATATAG+GGG | + | chr7_4:41428054-41428073 | None:intergenic | 30.0% | |
| CTGAGCTCTTGTATTATATA+GGG | + | chr7_4:41428055-41428074 | None:intergenic | 30.0% | |
| ACTGAGCTCTTGTATTATAT+AGG | + | chr7_4:41428056-41428075 | None:intergenic | 30.0% | |
| ! | TTGGTATTGAAATCTTAGGA+GGG | + | chr7_4:41428141-41428160 | None:intergenic | 30.0% |
| ! | TTTGGTATTGAAATCTTAGG+AGG | + | chr7_4:41428142-41428161 | None:intergenic | 30.0% |
| TTTAAAAGATCTTCAGCAAC+TGG | + | chr7_4:41428307-41428326 | None:intergenic | 30.0% | |
| ! | AGTTGCTGAAGATCTTTTAA+AGG | - | chr7_4:41428306-41428325 | Msa1154070:three_prime_UTR | 30.0% |
| AACAATAATCCTACTTCTGA+GGG | - | chr7_4:41428367-41428386 | Msa1154070:three_prime_UTR | 30.0% | |
| CTTTCCGAAGAAGAAAAAAA+AGG | + | chr7_4:41428719-41428738 | None:intergenic | 30.0% | |
| ATTGATAGGGTCCAATATTA+GGG | + | chr7_4:41429238-41429257 | None:intergenic | 30.0% | |
| AATTGATAGGGTCCAATATT+AGG | + | chr7_4:41429239-41429258 | None:intergenic | 30.0% | |
| TGAGTAGTGTTAATTTCAGT+CGG | + | chr7_4:41429391-41429410 | None:intergenic | 30.0% | |
| ! | GTTGTTTCCTCTAGTTATTA+TGG | - | chr7_4:41429583-41429602 | Msa1154070:intron | 30.0% |
| ! | TCCTCTAGTTATTATGGTTT+TGG | - | chr7_4:41429589-41429608 | Msa1154070:intron | 30.0% |
| TCAGAAAAGTTTCACAAACA+TGG | - | chr7_4:41429714-41429733 | Msa1154070:intron | 30.0% | |
| CAGAAAAGTTTCACAAACAT+GGG | - | chr7_4:41429715-41429734 | Msa1154070:intron | 30.0% | |
| !! | TAGTAGGTTGTTTTGTAAAG+AGG | + | chr7_4:41430296-41430315 | None:intergenic | 30.0% |
| CTTTACAAAACAACCTACTA+TGG | - | chr7_4:41430296-41430315 | Msa1154070:intron | 30.0% | |
| ACATCATCATACATGATATC+AGG | + | chr7_4:41430596-41430615 | None:intergenic | 30.0% | |
| ! | TGTATGATGATGTCCTTAAT+TGG | - | chr7_4:41430603-41430622 | Msa1154070:intron | 30.0% |
| ACACGCAAAAACTTAAACAA+AGG | + | chr7_4:41430682-41430701 | None:intergenic | 30.0% | |
| GATATGATTGTAGCTAGATT+TGG | - | chr7_4:41431016-41431035 | Msa1154070:five_prime_UTR | 30.0% | |
| GAACAATAATCCTACTTCTG+AGG | - | chr7_4:41428366-41428385 | Msa1154070:three_prime_UTR | 35.0% | |
| ! | CTCTAAAGAATCCTCAGATT+TGG | + | chr7_4:41428410-41428429 | None:intergenic | 35.0% |
| !! | CAAGAGTACTTCCATTGTTA+AGG | - | chr7_4:41428438-41428457 | Msa1154070:three_prime_UTR | 35.0% |
| TTGCTAATTAATACTCCCTC+CGG | - | chr7_4:41428883-41428902 | Msa1154070:CDS | 35.0% | |
| TTCTTATAAATAGGACCGGA+GGG | + | chr7_4:41428901-41428920 | None:intergenic | 35.0% | |
| TTTCTTATAAATAGGACCGG+AGG | + | chr7_4:41428902-41428921 | None:intergenic | 35.0% | |
| ACATATGAGTAATATTGGGG+TGG | - | chr7_4:41429048-41429067 | Msa1154070:intron | 35.0% | |
| CATATGAGTAATATTGGGGT+GGG | - | chr7_4:41429049-41429068 | Msa1154070:intron | 35.0% | |
| ATATGAGTAATATTGGGGTG+GGG | - | chr7_4:41429050-41429069 | Msa1154070:intron | 35.0% | |
| TATCCACTACATGTGATGAA+AGG | - | chr7_4:41429282-41429301 | Msa1154070:intron | 35.0% | |
| AATTTCAGTCGGGAAATTGT+CGG | + | chr7_4:41429380-41429399 | None:intergenic | 35.0% | |
| GAGTAGTGTTAATTTCAGTC+GGG | + | chr7_4:41429390-41429409 | None:intergenic | 35.0% | |
| !!! | GTGATAGTTTTGGTCAAACT+TGG | + | chr7_4:41429417-41429436 | None:intergenic | 35.0% |
| GCCAAAACCATAATAACTAG+AGG | + | chr7_4:41429593-41429612 | None:intergenic | 35.0% | |
| ACAAGTGCAACAAATTCAAG+AGG | - | chr7_4:41430265-41430284 | Msa1154070:intron | 35.0% | |
| !! | TAGGTTGTTTTGTAAAGAGG+TGG | + | chr7_4:41430293-41430312 | None:intergenic | 35.0% |
| TCCATTTCTCTCAGTGAAAA+AGG | - | chr7_4:41430436-41430455 | Msa1154070:intron | 35.0% | |
| !! | TCCTTTTTCACTGAGAGAAA+TGG | + | chr7_4:41430440-41430459 | None:intergenic | 35.0% |
| ATTTCTCTCAGTGAAAAAGG+AGG | - | chr7_4:41430439-41430458 | Msa1154070:intron | 35.0% | |
| !! | CACTTTTGATGATCCAGAAA+AGG | - | chr7_4:41430517-41430536 | Msa1154070:intron | 35.0% |
| CTTGATTCTCATGATCAGTT+AGG | - | chr7_4:41430560-41430579 | Msa1154070:intron | 35.0% | |
| TTCAAGAAAGTGGCCAATTA+AGG | + | chr7_4:41430619-41430638 | None:intergenic | 35.0% | |
| !! | CAATATGATGTTGGCTCAAA+TGG | - | chr7_4:41430765-41430784 | Msa1154070:CDS | 35.0% |
| AGAGAAGACTACACTAAAGA+TGG | - | chr7_4:41430833-41430852 | Msa1154070:CDS | 35.0% | |
| AAAGTCGGTCAATATCATCA+TGG | - | chr7_4:41430891-41430910 | Msa1154070:CDS | 35.0% | |
| AATCTTAGGAGGGTAGATAC+TGG | + | chr7_4:41428131-41428150 | None:intergenic | 40.0% | |
| ! | GAAAATCTAGCTCATGGTAG+TGG | - | chr7_4:41428172-41428191 | Msa1154070:three_prime_UTR | 40.0% |
| TTTGCAACTCACCAAATCTG+AGG | - | chr7_4:41428396-41428415 | Msa1154070:three_prime_UTR | 40.0% | |
| TCCATTGTTAAGGAACGTAG+AGG | - | chr7_4:41428448-41428467 | Msa1154070:three_prime_UTR | 40.0% | |
| GTAGAGGCTGTTACAAAAGA+AGG | - | chr7_4:41428464-41428483 | Msa1154070:three_prime_UTR | 40.0% | |
| TCTCTTATAAATAGGACCGG+AGG | - | chr7_4:41428997-41429016 | Msa1154070:intron | 40.0% | |
| CTCTTATAAATAGGACCGGA+GGG | - | chr7_4:41428998-41429017 | Msa1154070:intron | 40.0% | |
| CCAATAATAAGTACTCCCTC+CGG | + | chr7_4:41429016-41429035 | None:intergenic | 40.0% | |
| TAGGAGAGAGATAGAGACAA+AGG | + | chr7_4:41429099-41429118 | None:intergenic | 40.0% | |
| ATAGGGTCCAATATTAGGGT+GGG | + | chr7_4:41429234-41429253 | None:intergenic | 40.0% | |
| AGTCCTTTCATCACATGTAG+TGG | + | chr7_4:41429288-41429307 | None:intergenic | 40.0% | |
| !!! | ATTGTCGGGTTGCTTTTTGT+CGG | + | chr7_4:41429365-41429384 | None:intergenic | 40.0% |
| ATTTCAGTCGGGAAATTGTC+GGG | + | chr7_4:41429379-41429398 | None:intergenic | 40.0% | |
| AGTTTCACAAACATGGGAGA+AGG | - | chr7_4:41429721-41429740 | Msa1154070:intron | 40.0% | |
| GGTCATCAATGGAGAAAGTA+TGG | - | chr7_4:41429767-41429786 | Msa1154070:intron | 40.0% | |
| !!! | CGGTGTGCAAGATCTTTTTT+TGG | + | chr7_4:41429793-41429812 | None:intergenic | 40.0% |
| TGCTTTGCAGGAACTATTAC+AGG | - | chr7_4:41430204-41430223 | Msa1154070:intron | 40.0% | |
| TGCACTCACAAACATGATCA+AGG | - | chr7_4:41430227-41430246 | Msa1154070:intron | 40.0% | |
| GCAAGATTCTACAAGTGTGA+TGG | + | chr7_4:41430322-41430341 | None:intergenic | 40.0% | |
| GAGAATCCTCTATGATCTCA+GGG | + | chr7_4:41430349-41430368 | None:intergenic | 40.0% | |
| GTTGTCAAAGCTAAGGAACA+TGG | + | chr7_4:41430387-41430406 | None:intergenic | 40.0% | |
| GGAAAGAGTTGTCAAAGCTA+AGG | + | chr7_4:41430394-41430413 | None:intergenic | 40.0% | |
| !! | GAGAAATGGACAGTCTTGTT+TGG | + | chr7_4:41430426-41430445 | None:intergenic | 40.0% |
| AGTGAAAAAGGAGGATTGCA+AGG | - | chr7_4:41430448-41430467 | Msa1154070:intron | 40.0% | |
| AGGTAATCATTTGAAGGAGG+AGG | + | chr7_4:41430488-41430507 | None:intergenic | 40.0% | |
| GAGAGGTAATCATTTGAAGG+AGG | + | chr7_4:41430491-41430510 | None:intergenic | 40.0% | |
| CCAGAGAGGTAATCATTTGA+AGG | + | chr7_4:41430494-41430513 | None:intergenic | 40.0% | |
| CCTTCAAATGATTACCTCTC+TGG | - | chr7_4:41430491-41430510 | Msa1154070:intron | 40.0% | |
| ! | GATAGTGTGACATCCTTTTC+TGG | + | chr7_4:41430533-41430552 | None:intergenic | 40.0% |
| GGACTTGGATTTGAACATTG+TGG | - | chr7_4:41430792-41430811 | Msa1154070:CDS | 40.0% | |
| AAATCAGAGCCCTCAGAAGT+AGG | + | chr7_4:41428379-41428398 | None:intergenic | 45.0% | |
| GCCTCTACGTTCCTTAACAA+TGG | + | chr7_4:41428452-41428471 | None:intergenic | 45.0% | |
| !! | CCGGAGGGAGTACTTATTAT+TGG | - | chr7_4:41429013-41429032 | Msa1154070:intron | 45.0% |
| ! | GGCTTTAGTGACTTTGCGTT+GGG | + | chr7_4:41429212-41429231 | None:intergenic | 45.0% |
| CTAAAGCCCCACCCTAATAT+TGG | - | chr7_4:41429224-41429243 | Msa1154070:intron | 45.0% | |
| TAGGGTCCAATATTAGGGTG+GGG | + | chr7_4:41429233-41429252 | None:intergenic | 45.0% | |
| GATAGGGTCCAATATTAGGG+TGG | + | chr7_4:41429235-41429254 | None:intergenic | 45.0% | |
| !!! | TTGTCGGGTTGCTTTTTGTC+GGG | + | chr7_4:41429364-41429383 | None:intergenic | 45.0% |
| ! | GAGTCATGGGGTGATAGTTT+TGG | + | chr7_4:41429427-41429446 | None:intergenic | 45.0% |
| ACCCCATGACTCCTTTATTG+TGG | - | chr7_4:41429435-41429454 | Msa1154070:intron | 45.0% | |
| CCCACAATAAAGGAGTCATG+GGG | + | chr7_4:41429439-41429458 | None:intergenic | 45.0% | |
| CCCCATGACTCCTTTATTGT+GGG | - | chr7_4:41429436-41429455 | Msa1154070:intron | 45.0% | |
| GCCCACAATAAAGGAGTCAT+GGG | + | chr7_4:41429440-41429459 | None:intergenic | 45.0% | |
| CGTCCAATCAAAACTTGCGT+TGG | + | chr7_4:41429462-41429481 | None:intergenic | 45.0% | |
| !!! | CGCAAGTTTTGATTGGACGA+CGG | - | chr7_4:41429463-41429482 | Msa1154070:intron | 45.0% |
| TTGATTGGACGACGGCATTT+CGG | - | chr7_4:41429471-41429490 | Msa1154070:intron | 45.0% | |
| ! | CATTGATGACCATCTTCCAC+GGG | + | chr7_4:41429758-41429777 | None:intergenic | 45.0% |
| ! | CCATTGATGACCATCTTCCA+CGG | + | chr7_4:41429759-41429778 | None:intergenic | 45.0% |
| ACAAGTGTGATGGCCATAGT+AGG | + | chr7_4:41430312-41430331 | None:intergenic | 45.0% | |
| GGAGAATCCTCTATGATCTC+AGG | + | chr7_4:41430350-41430369 | None:intergenic | 45.0% | |
| ! | AACATGGAAGACTGGTCACA+AGG | + | chr7_4:41430371-41430390 | None:intergenic | 45.0% |
| AGCTAAGGAACATGGAAGAC+TGG | + | chr7_4:41430379-41430398 | None:intergenic | 45.0% | |
| !! | AGTCTTGTTTGGCTGGTGTT+GGG | + | chr7_4:41430415-41430434 | None:intergenic | 45.0% |
| !! | AATGGACAGTCTTGTTTGGC+TGG | + | chr7_4:41430422-41430441 | None:intergenic | 45.0% |
| CATCAAAAGTGAGTCCAGAG+AGG | + | chr7_4:41430508-41430527 | None:intergenic | 45.0% | |
| !! | GATGTTGGCTCAAATGGAAC+TGG | - | chr7_4:41430771-41430790 | Msa1154070:CDS | 45.0% |
| GCAAGATGTAGTACAACGAG+AGG | - | chr7_4:41430930-41430949 | Msa1154070:CDS | 45.0% | |
| !! | TATATATATATATATATGTA+TGG | - | chr7_4:41430972-41430991 | Msa1154070:CDS | 5.0% |
| GACTTTGCGTTGGGTGACTT+TGG | + | chr7_4:41429203-41429222 | None:intergenic | 50.0% | |
| ! | GGGCTTTAGTGACTTTGCGT+TGG | + | chr7_4:41429213-41429232 | None:intergenic | 50.0% |
| GGCCCACAATAAAGGAGTCA+TGG | + | chr7_4:41429441-41429460 | None:intergenic | 50.0% | |
| ! | CTTGCGTTGGCCCACAATAA+AGG | + | chr7_4:41429449-41429468 | None:intergenic | 50.0% |
| !! | GGGCCAACGCAAGTTTTGAT+TGG | - | chr7_4:41429456-41429475 | Msa1154070:intron | 50.0% |
| TGATTGGACGACGGCATTTC+GGG | - | chr7_4:41429472-41429491 | Msa1154070:intron | 50.0% | |
| ACGGCATTTCGGGAAGCAAT+CGG | - | chr7_4:41429482-41429501 | Msa1154070:intron | 50.0% | |
| CCGTGGAAGATGGTCATCAA+TGG | - | chr7_4:41429756-41429775 | Msa1154070:intron | 50.0% | |
| !! | TCTTGCACACCGATTTCCCA+AGG | - | chr7_4:41429801-41429820 | Msa1154070:intron | 50.0% |
| GCAAAGCCCTGAGATCATAG+AGG | - | chr7_4:41430340-41430359 | Msa1154070:intron | 50.0% | |
| !! | CAGTCTTGTTTGGCTGGTGT+TGG | + | chr7_4:41430416-41430435 | None:intergenic | 50.0% |
| GGCTCAAATGGAACTGGACT+TGG | - | chr7_4:41430777-41430796 | Msa1154070:CDS | 50.0% | |
| !! | CTAGCTCATGGTAGTGGTCG+TGG | - | chr7_4:41428178-41428197 | Msa1154070:three_prime_UTR | 55.0% |
| ! | GGCTTCCGTGACTTTGGCTT+CGG | - | chr7_4:41429071-41429090 | Msa1154070:intron | 55.0% |
| !! | AGGCACCGAAGCCAAAGTCA+CGG | + | chr7_4:41429079-41429098 | None:intergenic | 55.0% |
| CGGCATTTCGGGAAGCAATC+GGG | - | chr7_4:41429483-41429502 | Msa1154070:intron | 55.0% | |
| TCTGATCGTCCCGTGGAAGA+TGG | - | chr7_4:41429746-41429765 | Msa1154070:intron | 55.0% | |
| GAAGGAGTCTGATCGTCCCG+TGG | - | chr7_4:41429739-41429758 | Msa1154070:intron | 60.0% | |
| GGGTGGGGCTTCCGTGACTT+TGG | - | chr7_4:41429065-41429084 | Msa1154070:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 41428042 | 41431116 | 41428042 | ID=Msa1154070;Name=Msa1154070 |
| chr7_4 | mRNA | 41428042 | 41431116 | 41428042 | ID=Msa1154070-mRNA-1;Parent=Msa1154070;Name=Msa1154070-mRNA-1;_AED=0.25;_eAED=0.25;_QI=121|1|1|1|1|1|3|479|283 |
| chr7_4 | exon | 41428042 | 41428944 | 41428042 | ID=Msa1154070-mRNA-1:exon:10033;Parent=Msa1154070-mRNA-1 |
| chr7_4 | exon | 41429336 | 41429440 | 41429336 | ID=Msa1154070-mRNA-1:exon:10032;Parent=Msa1154070-mRNA-1 |
| chr7_4 | exon | 41430673 | 41431116 | 41430673 | ID=Msa1154070-mRNA-1:exon:10031;Parent=Msa1154070-mRNA-1 |
| chr7_4 | five_prime_UTR | 41430996 | 41431116 | 41430996 | ID=Msa1154070-mRNA-1:five_prime_utr;Parent=Msa1154070-mRNA-1 |
| chr7_4 | CDS | 41430673 | 41430995 | 41430673 | ID=Msa1154070-mRNA-1:cds;Parent=Msa1154070-mRNA-1 |
| chr7_4 | CDS | 41429336 | 41429440 | 41429336 | ID=Msa1154070-mRNA-1:cds;Parent=Msa1154070-mRNA-1 |
| chr7_4 | CDS | 41428521 | 41428944 | 41428521 | ID=Msa1154070-mRNA-1:cds;Parent=Msa1154070-mRNA-1 |
| chr7_4 | three_prime_UTR | 41428042 | 41428520 | 41428042 | ID=Msa1154070-mRNA-1:three_prime_utr;Parent=Msa1154070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
