Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1156180 | XP_013449374.1 | 96.577 | 409 | 4 | 1 | 1 | 399 | 1 | 409 | 0.0 | 804 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1156180 | sp|O04153|CALR3_ARATH | 73.710 | 407 | 87 | 5 | 12 | 400 | 8 | 412 | 0.0 | 580 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1156180 | A0A072U156 | 96.577 | 409 | 4 | 1 | 1 | 399 | 1 | 409 | 0.0 | 804 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0042410 | Msa1156180 | 0.804026 | 2.631876e-49 | -8.615850e-47 |
Msa0054240 | Msa1156180 | 0.802189 | 6.312769e-49 | -8.615850e-47 |
Msa0055730 | Msa1156180 | 0.806726 | 7.151133e-50 | -8.615850e-47 |
Msa0079650 | Msa1156180 | 0.807163 | 5.779763e-50 | -8.615850e-47 |
Msa0085290 | Msa1156180 | 0.834565 | 2.784480e-56 | -8.615850e-47 |
Msa0088550 | Msa1156180 | 0.807528 | 4.837012e-50 | -8.615850e-47 |
Msa0100070 | Msa1156180 | 0.806802 | 6.891366e-50 | -8.615850e-47 |
Msa0607180 | Msa1156180 | 0.866229 | 3.321585e-65 | -8.615850e-47 |
Msa0621900 | Msa1156180 | 0.803622 | 3.193565e-49 | -8.615850e-47 |
Msa0623080 | Msa1156180 | 0.815065 | 1.118797e-51 | -8.615850e-47 |
Msa0647360 | Msa1156180 | 0.869361 | 3.279103e-66 | -8.615850e-47 |
Msa0686850 | Msa1156180 | 0.846465 | 2.134954e-59 | -8.615850e-47 |
Msa0689010 | Msa1156180 | 0.830613 | 2.660818e-55 | -8.615850e-47 |
Msa0696740 | Msa1156180 | 0.836007 | 1.204239e-56 | -8.615850e-47 |
Msa0696770 | Msa1156180 | 0.832047 | 1.180941e-55 | -8.615850e-47 |
Msa0703490 | Msa1156180 | 0.802794 | 4.736883e-49 | -8.615850e-47 |
Msa0762850 | Msa1156180 | 0.800456 | 1.428929e-48 | -8.615850e-47 |
Msa0762890 | Msa1156180 | 0.805345 | 1.395895e-49 | -8.615850e-47 |
Msa0131420 | Msa1156180 | 0.804730 | 1.877445e-49 | -8.615850e-47 |
Msa0135360 | Msa1156180 | 0.801791 | 7.623251e-49 | -8.615850e-47 |
Msa0141230 | Msa1156180 | 0.834983 | 2.186034e-56 | -8.615850e-47 |
Msa0153430 | Msa1156180 | 0.803295 | 3.731279e-49 | -8.615850e-47 |
Msa0153450 | Msa1156180 | 0.826935 | 2.064090e-54 | -8.615850e-47 |
Msa0179860 | Msa1156180 | 0.802764 | 4.805988e-49 | -8.615850e-47 |
Msa0201330 | Msa1156180 | 0.811113 | 8.236594e-51 | -8.615850e-47 |
Msa0201370 | Msa1156180 | 0.845583 | 3.710648e-59 | -8.615850e-47 |
Msa0201390 | Msa1156180 | 0.814720 | 1.334461e-51 | -8.615850e-47 |
Msa0202750 | Msa1156180 | 0.844207 | 8.720569e-59 | -8.615850e-47 |
Msa0212310 | Msa1156180 | 0.861529 | 9.626582e-64 | -8.615850e-47 |
Msa0418960 | Msa1156180 | 0.818406 | 1.992660e-52 | -8.615850e-47 |
Msa0425890 | Msa1156180 | 0.817781 | 2.759210e-52 | -8.615850e-47 |
Msa0426110 | Msa1156180 | 0.838758 | 2.377015e-57 | -8.615850e-47 |
Msa0445040 | Msa1156180 | 0.817412 | 3.341824e-52 | -8.615850e-47 |
Msa0445280 | Msa1156180 | 0.820891 | 5.398541e-53 | -8.615850e-47 |
Msa0472330 | Msa1156180 | 0.808070 | 3.710888e-50 | -8.615850e-47 |
Msa0996130 | Msa1156180 | 0.848714 | 5.139736e-60 | -8.615850e-47 |
Msa1026500 | Msa1156180 | 0.881445 | 2.385521e-70 | -8.615850e-47 |
Msa1026510 | Msa1156180 | 0.824458 | 7.983528e-54 | -8.615850e-47 |
Msa1029090 | Msa1156180 | 0.987519 | 1.497543e-170 | -8.615850e-47 |
Msa1037710 | Msa1156180 | 0.812436 | 4.242791e-51 | -8.615850e-47 |
Msa1044090 | Msa1156180 | 0.827067 | 1.920038e-54 | -8.615850e-47 |
Msa1055430 | Msa1156180 | 0.800570 | 1.354913e-48 | -8.615850e-47 |
Msa1058120 | Msa1156180 | 0.800291 | 1.543783e-48 | -8.615850e-47 |
Msa1069490 | Msa1156180 | 0.809804 | 1.578492e-50 | -8.615850e-47 |
Msa1074570 | Msa1156180 | 0.865628 | 5.146213e-65 | -8.615850e-47 |
Msa1074580 | Msa1156180 | 0.820192 | 7.810788e-53 | -8.615850e-47 |
Msa0243930 | Msa1156180 | 0.842954 | 1.885723e-58 | -8.615850e-47 |
Msa0243940 | Msa1156180 | 0.821602 | 3.700051e-53 | -8.615850e-47 |
Msa0245880 | Msa1156180 | 0.862378 | 5.289323e-64 | -8.615850e-47 |
Msa0256270 | Msa1156180 | 0.822025 | 2.952979e-53 | -8.615850e-47 |
Msa0282590 | Msa1156180 | 0.840302 | 9.438766e-58 | -8.615850e-47 |
Msa0282600 | Msa1156180 | 0.801334 | 9.458205e-49 | -8.615850e-47 |
Msa0308580 | Msa1156180 | 0.803819 | 2.906153e-49 | -8.615850e-47 |
Msa0347180 | Msa1156180 | 0.832137 | 1.121971e-55 | -8.615850e-47 |
Msa1107800 | Msa1156180 | 0.833331 | 5.670056e-56 | -8.615850e-47 |
Msa1111750 | Msa1156180 | 0.825287 | 5.088109e-54 | -8.615850e-47 |
Msa1111760 | Msa1156180 | 0.893225 | 7.663039e-75 | -8.615850e-47 |
Msa1121660 | Msa1156180 | 0.950880 | 6.582330e-109 | -8.615850e-47 |
Msa1154070 | Msa1156180 | 0.893286 | 7.237737e-75 | -8.615850e-47 |
Msa1154080 | Msa1156180 | 0.821390 | 4.140892e-53 | -8.615850e-47 |
Msa1156180 | Msa1179120 | 0.836881 | 7.214161e-57 | -8.615850e-47 |
Msa1156180 | Msa1181550 | 0.806237 | 9.067981e-50 | -8.615850e-47 |
Msa1156180 | Msa1249940 | 0.802172 | 6.363914e-49 | -8.615850e-47 |
Msa1156180 | Msa1261470 | 0.815027 | 1.140611e-51 | -8.615850e-47 |
Msa1156180 | Msa1265950 | 0.816967 | 4.208395e-52 | -8.615850e-47 |
Msa1156180 | Msa1304180 | 0.817809 | 2.719706e-52 | -8.615850e-47 |
Msa1156180 | Msa1314170 | 0.800021 | 1.752181e-48 | -8.615850e-47 |
Msa1156180 | Msa1381940 | 0.833045 | 6.679905e-56 | -8.615850e-47 |
Msa1156180 | Msa1431010 | 0.808788 | 2.606904e-50 | -8.615850e-47 |
Msa1156180 | Msa1447440 | 0.804851 | 1.771433e-49 | -8.615850e-47 |
Msa1156180 | Msa1454000 | 0.820922 | 5.310614e-53 | -8.615850e-47 |
Msa1156180 | Msa1461250 | -0.802107 | 6.564435e-49 | -8.615850e-47 |
Msa0488940 | Msa1156180 | 0.816887 | 4.386754e-52 | -8.615850e-47 |
Msa0506300 | Msa1156180 | 0.840045 | 1.101207e-57 | -8.615850e-47 |
Msa0524890 | Msa1156180 | -0.818781 | 1.639035e-52 | -8.615850e-47 |
Msa0547760 | Msa1156180 | 0.816502 | 5.350070e-52 | -8.615850e-47 |
Msa0553120 | Msa1156180 | 0.800396 | 1.469702e-48 | -8.615850e-47 |
Msa0559250 | Msa1156180 | 0.805056 | 1.604819e-49 | -8.615850e-47 |
Msa0567020 | Msa1156180 | 0.800552 | 1.365886e-48 | -8.615850e-47 |
Msa0946680 | Msa1156180 | 0.955185 | 5.425835e-113 | -8.615850e-47 |
Msa0961460 | Msa1156180 | 0.824905 | 6.265416e-54 | -8.615850e-47 |
Msa0961490 | Msa1156180 | 0.849533 | 3.042378e-60 | -8.615850e-47 |
Msa0964130 | Msa1156180 | 0.828770 | 7.474226e-55 | -8.615850e-47 |
Msa0976640 | Msa1156180 | 0.806774 | 6.986193e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1156180 | MtrunA17_Chr7g0249551 | 96.569 | 408 | 4 | 1 | 1 | 398 | 1 | 408 | 0.0 | 802 |
Msa1156180 | MtrunA17_Chr4g0033731 | 78.977 | 352 | 63 | 2 | 6 | 346 | 4 | 355 | 0.0 | 583 |
Msa1156180 | MtrunA17_Chr1g0192661 | 61.905 | 336 | 118 | 1 | 22 | 347 | 21 | 356 | 1.54e-150 | 432 |
Msa1156180 | MtrunA17_Chr8g0385501 | 31.144 | 411 | 197 | 14 | 1 | 336 | 1 | 400 | 1.89e-47 | 169 |
Msa1156180 | MtrunA17_Chr3g0131441 | 32.683 | 410 | 193 | 15 | 1 | 338 | 1 | 399 | 2.60e-47 | 169 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1156180 | AT1G08450.1 | 73.710 | 407 | 87 | 5 | 12 | 400 | 8 | 412 | 0.0 | 580 |
Msa1156180 | AT1G08450.3 | 68.305 | 407 | 84 | 6 | 12 | 400 | 8 | 387 | 0.0 | 518 |
Msa1156180 | AT1G08450.2 | 65.985 | 391 | 86 | 4 | 11 | 400 | 14 | 358 | 1.92e-169 | 479 |
Msa1156180 | AT1G09210.1 | 60.674 | 356 | 129 | 2 | 11 | 355 | 8 | 363 | 7.52e-157 | 449 |
Msa1156180 | AT1G56340.2 | 61.064 | 357 | 128 | 2 | 10 | 355 | 7 | 363 | 4.00e-156 | 447 |
Msa1156180 | AT1G56340.1 | 61.064 | 357 | 128 | 2 | 10 | 355 | 7 | 363 | 1.20e-155 | 446 |
Msa1156180 | AT5G61790.1 | 33.666 | 401 | 182 | 14 | 10 | 337 | 5 | 394 | 4.66e-53 | 185 |
Msa1156180 | AT5G07340.1 | 33.947 | 380 | 172 | 13 | 26 | 337 | 28 | 396 | 1.62e-47 | 170 |
Msa1156180 | AT5G07340.2 | 34.211 | 380 | 171 | 13 | 26 | 337 | 36 | 404 | 1.97e-47 | 170 |
Find 98 sgRNAs with CRISPR-Local
Find 658 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATGCTGGATTTGGTATCTT+TGG | 0.251014 | 7_4:+44426695 | None:intergenic |
CACTGCAGGTCCTTCTTTAC+CGG | 0.255730 | 7_4:+44428148 | None:intergenic |
TTTGTTAATCAAAAGAAATT+TGG | 0.279487 | 7_4:-44428633 | Msa1156180:CDS |
TCAAGCACACGGCTGGGAAA+TGG | 0.314152 | 7_4:-44429124 | Msa1156180:CDS |
TTCCATTTCCCTTTGTAGTT+AGG | 0.319731 | 7_4:+44426529 | None:intergenic |
CAACTAACCTCTTTAGCCTT+TGG | 0.340138 | 7_4:+44426890 | None:intergenic |
GTTCATGTACCTCCTCCTCT+TGG | 0.352586 | 7_4:+44425698 | None:intergenic |
GTTTGGCATCATTAGATGTT+TGG | 0.355336 | 7_4:+44428781 | None:intergenic |
TTCCATGGTCCTTTGTATGC+TGG | 0.361782 | 7_4:+44426680 | None:intergenic |
ACCTCAGGTTTGACAGCATT+AGG | 0.362351 | 7_4:+44427048 | None:intergenic |
GTGTCTGTTCCACATAAATC+TGG | 0.363941 | 7_4:+44428214 | None:intergenic |
ATGAAGATGAAGATGGAATA+TGG | 0.364616 | 7_4:-44426724 | Msa1156180:CDS |
TGCAGAGATCGCAAAGTGTT+TGG | 0.365410 | 7_4:+44428764 | None:intergenic |
GATAATAGAGAGCGAGATTC+CGG | 0.368628 | 7_4:-44428055 | Msa1156180:CDS |
GGTCCTTTGTATGCTGGATT+TGG | 0.374372 | 7_4:+44426686 | None:intergenic |
TCATCTTCATCCCAACTATC+AGG | 0.377430 | 7_4:+44426737 | None:intergenic |
GAATAAGCAACACACCTATA+TGG | 0.379411 | 7_4:+44428600 | None:intergenic |
TCTATGCCGACATATTTGAT+AGG | 0.381388 | 7_4:+44426344 | None:intergenic |
CCTCAGGTTTGACAGCATTA+GGG | 0.383111 | 7_4:+44427049 | None:intergenic |
CTATTCGCAGCCCGCAGATT+GGG | 0.390617 | 7_4:-44427094 | Msa1156180:intron |
ACCTCTTTAGCCTTTGGATC+AGG | 0.399373 | 7_4:+44426896 | None:intergenic |
CAAGCACACGGCTGGGAAAT+GGG | 0.400621 | 7_4:-44429123 | Msa1156180:CDS |
TTCATGTACCTCCTCCTCTT+GGG | 0.404891 | 7_4:+44425699 | None:intergenic |
ATCCTAACTACAAAGGGAAA+TGG | 0.410266 | 7_4:-44426531 | Msa1156180:CDS |
AATATGTCGGCATAGAAGTT+TGG | 0.412710 | 7_4:-44426337 | Msa1156180:CDS |
ATTCTCTACAGTGTAATGTT+TGG | 0.413800 | 7_4:-44428238 | Msa1156180:intron |
AAAATTGCTTATTCCGCAAA+TGG | 0.420029 | 7_4:-44429852 | Msa1156180:exon |
CCTATTCGCAGCCCGCAGAT+TGG | 0.426278 | 7_4:-44427095 | Msa1156180:intron |
TTTGGATCAGGAATTTCTGC+TGG | 0.426476 | 7_4:+44426908 | None:intergenic |
TCTGAATTAGCCTGATAGTT+GGG | 0.429924 | 7_4:-44426747 | Msa1156180:intron |
GGCTTAAGCACATAAAGATC+GGG | 0.434356 | 7_4:+44426365 | None:intergenic |
CTGTTCTTGTTGCTGAACTC+TGG | 0.437882 | 7_4:+44428735 | None:intergenic |
CAACAAGTACCTTTATCATC+TGG | 0.442115 | 7_4:+44429092 | None:intergenic |
CCAATCTGTATACAGGCTTC+CGG | 0.442635 | 7_4:+44428036 | None:intergenic |
CTCTGAATTAGCCTGATAGT+TGG | 0.446966 | 7_4:-44426748 | Msa1156180:intron |
CCGGAAGCCTGTATACAGAT+TGG | 0.462529 | 7_4:-44428036 | Msa1156180:CDS |
CACACGGCTGGGAAATGGGC+TGG | 0.464724 | 7_4:-44429119 | Msa1156180:CDS |
GGTTACATGAAGCTCCTCTC+TGG | 0.465293 | 7_4:-44428657 | Msa1156180:CDS |
AGATGGATGGCGAAGTCGTT+GGG | 0.466818 | 7_4:-44429189 | Msa1156180:CDS |
GAATATCCCAATCTGTATAC+AGG | 0.467718 | 7_4:+44428029 | None:intergenic |
CAACAAACCTTTCGTTTCCA+TGG | 0.469118 | 7_4:+44426665 | None:intergenic |
CGGAAGCCTGTATACAGATT+GGG | 0.473200 | 7_4:-44428035 | Msa1156180:CDS |
GCTGGAGATCCAGATGATAA+AGG | 0.477830 | 7_4:-44429101 | Msa1156180:intron |
TCCTGATCCAAAGGCTAAAG+AGG | 0.483883 | 7_4:-44426897 | Msa1156180:intron |
GTTAATCAAAAGAAATTTGG+TGG | 0.491208 | 7_4:-44428630 | Msa1156180:CDS |
AGCCGTGTGCTTGAACGAAC+CGG | 0.494358 | 7_4:+44429133 | None:intergenic |
TTGGATCAGGAATTTCTGCT+GGG | 0.499650 | 7_4:+44426909 | None:intergenic |
AAGAAAAGCCCAAGAGGAGG+AGG | 0.504679 | 7_4:-44425707 | Msa1156180:intron |
TCAAGAATCCTAACTACAAA+GGG | 0.508174 | 7_4:-44426537 | Msa1156180:CDS |
ACTTGTCAGTTTCACACTGC+AGG | 0.509837 | 7_4:+44428134 | None:intergenic |
TCAAAATTACCCGGTAAAGA+AGG | 0.510564 | 7_4:-44428158 | Msa1156180:CDS |
GAGCAAGAGAAGACGGTGAA+AGG | 0.515516 | 7_4:-44425582 | Msa1156180:CDS |
TTCTCTGTCGTCCCAATCTG+CGG | 0.522625 | 7_4:+44427083 | None:intergenic |
AGAACACTGTATGTAGCATC+TGG | 0.525406 | 7_4:+44428082 | None:intergenic |
AGATGCTACATACAGTGTTC+TGG | 0.526327 | 7_4:-44428080 | Msa1156180:CDS |
AGGCTTAAGCACATAAAGAT+CGG | 0.527530 | 7_4:+44426364 | None:intergenic |
TTAATCAAAAGAAATTTGGT+GGG | 0.527656 | 7_4:-44428629 | Msa1156180:CDS |
ATCTGTCTCTATGTCTGTCA+CGG | 0.542268 | 7_4:+44425530 | None:intergenic |
ATGTTTGGACCAGATTTATG+TGG | 0.542362 | 7_4:-44428223 | Msa1156180:CDS |
AAAAGTAGCGAAGGCAAAGC+CGG | 0.546475 | 7_4:-44429152 | Msa1156180:CDS |
ATCAAGAATCCTAACTACAA+AGG | 0.551395 | 7_4:-44426538 | Msa1156180:CDS |
ATGAAGATGGAATATGGAAG+AGG | 0.552425 | 7_4:-44426718 | Msa1156180:CDS |
TCTCTGTCGTCCCAATCTGC+GGG | 0.553759 | 7_4:+44427084 | None:intergenic |
ACATAGAGACAGATATAGAA+AGG | 0.555956 | 7_4:-44425521 | Msa1156180:intron |
TGTCGGCATAGAAGTTTGGC+AGG | 0.557113 | 7_4:-44426333 | Msa1156180:intron |
AAGGGAAATGGAAAACTCCA+TGG | 0.558271 | 7_4:-44426519 | Msa1156180:CDS |
TTGGTGGGGATACGCCATAT+AGG | 0.559039 | 7_4:-44428614 | Msa1156180:intron |
TAATCAAAAGAAATTTGGTG+GGG | 0.560107 | 7_4:-44428628 | Msa1156180:CDS |
GCTCAAAGAGCAAGAGAAGA+CGG | 0.562934 | 7_4:-44425589 | Msa1156180:CDS |
AAGATGGATGGCGAAGTCGT+TGG | 0.569423 | 7_4:-44429190 | Msa1156180:CDS |
GAAAATAAGAAAAGCCCAAG+AGG | 0.570219 | 7_4:-44425713 | Msa1156180:CDS |
AGTTGGGATGAAGATGAAGA+TGG | 0.576627 | 7_4:-44426731 | Msa1156180:CDS |
ACTCCATGGATTGATAATCC+AGG | 0.577290 | 7_4:-44426505 | Msa1156180:intron |
AGCCGGTTCGTTCAAGCACA+CGG | 0.577430 | 7_4:-44429135 | Msa1156180:CDS |
AGCAGAAATTCCTGATCCAA+AGG | 0.579110 | 7_4:-44426906 | Msa1156180:CDS |
GTTCGTTCAAGCACACGGCT+GGG | 0.581442 | 7_4:-44429130 | Msa1156180:CDS |
CAAGAGATTGAATGTGGTGG+AGG | 0.581822 | 7_4:-44428678 | Msa1156180:CDS |
CAAGAGAAGACGGTGAAAGG+CGG | 0.587834 | 7_4:-44425579 | Msa1156180:CDS |
ACTGCAGGTCCTTCTTTACC+GGG | 0.588635 | 7_4:+44428149 | None:intergenic |
ATACCTGGATTATCAATCCA+TGG | 0.589530 | 7_4:+44426502 | None:intergenic |
GTCGTTGGGTAAGATCAGAC+TGG | 0.597270 | 7_4:-44429175 | Msa1156180:CDS |
CTTAAGCCTATCAAATATGT+CGG | 0.600649 | 7_4:-44426350 | Msa1156180:CDS |
TTTGAACAAGAGATTGAATG+TGG | 0.613935 | 7_4:-44428684 | Msa1156180:CDS |
AATAAGAAAAGCCCAAGAGG+AGG | 0.620304 | 7_4:-44425710 | Msa1156180:CDS |
ATTGCTTATTCCGCAAATGG+CGG | 0.631161 | 7_4:-44429849 | Msa1156180:exon |
CATGTCATAGTCTCTTACCA+AGG | 0.632816 | 7_4:-44428181 | Msa1156180:CDS |
CAAAGGACCATGGAAACGAA+AGG | 0.637290 | 7_4:-44426672 | Msa1156180:intron |
ATCCAGCATACAAAGGACCA+TGG | 0.638923 | 7_4:-44426682 | Msa1156180:CDS |
TCAGACTGGAAAAGTAGCGA+AGG | 0.639971 | 7_4:-44429161 | Msa1156180:CDS |
TTACCAAGGTCAAAATTACC+CGG | 0.651196 | 7_4:-44428167 | Msa1156180:CDS |
ATACCAAATCCAGCATACAA+AGG | 0.656179 | 7_4:-44426689 | Msa1156180:CDS |
TTTGATTAACAAATCCAGAG+AGG | 0.658404 | 7_4:+44428643 | None:intergenic |
CCCTAATGCTGTCAAACCTG+AGG | 0.659724 | 7_4:-44427049 | Msa1156180:intron |
GAACAAGAGATTGAATGTGG+TGG | 0.669177 | 7_4:-44428681 | Msa1156180:CDS |
CTTGGTAAGAGACTATGACA+TGG | 0.669207 | 7_4:+44428182 | None:intergenic |
GAAAGGCGGAGAAAAGAGAG+AGG | 0.679954 | 7_4:-44425565 | Msa1156180:CDS |
GCTTAAGCACATAAAGATCG+GGG | 0.701732 | 7_4:+44426366 | None:intergenic |
TGAAGTGTTTGCCAACAGAG+AGG | 0.753342 | 7_4:-44426097 | Msa1156180:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTAGCTTAATTATTTTTT+TGG | + | chr7_4:44419503-44419522 | None:intergenic | 10.0% |
!! | TTAAAGAAAAAATAATACTT+TGG | + | chr7_4:44419842-44419861 | None:intergenic | 10.0% |
!!! | TAAAATTAATGCATATATTT+TGG | - | chr7_4:44420957-44420976 | Msa1156180:intron | 10.0% |
!!! | TTTTAATGAATATGTTATTT+TGG | - | chr7_4:44424941-44424960 | Msa1156180:intron | 10.0% |
!!! | TATTGAGTTTATTTATTTTT+TGG | - | chr7_4:44425736-44425755 | Msa1156180:CDS | 10.0% |
!!! | ATTGAGTTTATTTATTTTTT+GGG | - | chr7_4:44425737-44425756 | Msa1156180:CDS | 10.0% |
!!! | TTTTAATTAAGTCTAATTTT+TGG | - | chr7_4:44426273-44426292 | Msa1156180:intron | 10.0% |
!!! | CTATTTGATATAATTTTTTT+AGG | + | chr7_4:44427662-44427681 | None:intergenic | 10.0% |
!! | TTAAAAATAAGAAGAAAATT+TGG | - | chr7_4:44428418-44428437 | Msa1156180:intron | 10.0% |
!!! | TTAATTAATTGTGTTTTTTT+AGG | - | chr7_4:44429868-44429887 | Msa1156180:five_prime_UTR | 10.0% |
!!! | TAATTAATTGTGTTTTTTTA+GGG | - | chr7_4:44429869-44429888 | Msa1156180:five_prime_UTR | 10.0% |
!! | TATTACTTCAAGAATTTAAT+TGG | - | chr7_4:44417652-44417671 | Msa1156180:intron | 15.0% |
!! | TATGATTATGATTATAAGAA+TGG | - | chr7_4:44417755-44417774 | Msa1156180:intron | 15.0% |
!! | TAAAAATGAATAAAAGACAT+AGG | - | chr7_4:44417822-44417841 | Msa1156180:intron | 15.0% |
!!! | AATGTAAAATGGATTATTAT+AGG | - | chr7_4:44418141-44418160 | Msa1156180:intron | 15.0% |
!!! | TTAACTATTAGATGTTATTT+TGG | - | chr7_4:44418164-44418183 | Msa1156180:intron | 15.0% |
!!! | TCTTGTAATTTTATTGTAAA+AGG | - | chr7_4:44418230-44418249 | Msa1156180:intron | 15.0% |
!!! | CTTGTAATTTTATTGTAAAA+GGG | - | chr7_4:44418231-44418250 | Msa1156180:intron | 15.0% |
!! | TTTGTTAATCAAAAGAAATT+TGG | - | chr7_4:44418520-44418539 | Msa1156180:intron | 15.0% |
!! | TTTGATTAATATTAAAGTAG+AGG | + | chr7_4:44418655-44418674 | None:intergenic | 15.0% |
!!! | ACTTTTATACATAAAAGATA+AGG | + | chr7_4:44419367-44419386 | None:intergenic | 15.0% |
!! | ATGTATAAAAGTTAGATATA+AGG | - | chr7_4:44419375-44419394 | Msa1156180:intron | 15.0% |
!!! | AAAAATACATGGATTATTAA+AGG | + | chr7_4:44419449-44419468 | None:intergenic | 15.0% |
!! | TGAAGTTATAAAAAAATACA+TGG | + | chr7_4:44419460-44419479 | None:intergenic | 15.0% |
!!! | CATTTTGAAACAATTTTTTT+TGG | + | chr7_4:44419738-44419757 | None:intergenic | 15.0% |
!! | AGAAAAAGTTATTATTACAT+TGG | + | chr7_4:44419778-44419797 | None:intergenic | 15.0% |
!! | GTAACATATTATTAATTGAA+GGG | + | chr7_4:44419812-44419831 | None:intergenic | 15.0% |
!! | TGTAACATATTATTAATTGA+AGG | + | chr7_4:44419813-44419832 | None:intergenic | 15.0% |
!!! | AACTCATTTATTTTTTTCAT+TGG | - | chr7_4:44420199-44420218 | Msa1156180:intron | 15.0% |
!! | ACTCATAAATAAACAATATT+AGG | + | chr7_4:44421797-44421816 | None:intergenic | 15.0% |
!!! | ATATTTCTAATGACATTATT+AGG | + | chr7_4:44421874-44421893 | None:intergenic | 15.0% |
!!! | ATGACTTTTTTTTTTTTTGA+AGG | + | chr7_4:44422167-44422186 | None:intergenic | 15.0% |
!!! | TCATAACATTAGTTTAAAAA+GGG | - | chr7_4:44422183-44422202 | Msa1156180:intron | 15.0% |
!! | ACTTAATAATGATATATAGT+TGG | - | chr7_4:44422553-44422572 | Msa1156180:intron | 15.0% |
!!! | ATAGTTAAGACTTAAAATTT+TGG | - | chr7_4:44424137-44424156 | Msa1156180:intron | 15.0% |
!!! | TTGTATCTAAATTTTAGTTT+TGG | - | chr7_4:44424760-44424779 | Msa1156180:intron | 15.0% |
!!! | TGTATCTAAATTTTAGTTTT+GGG | - | chr7_4:44424761-44424780 | Msa1156180:intron | 15.0% |
!!! | TATTTTTTTCATTGTCAAAT+TGG | + | chr7_4:44424855-44424874 | None:intergenic | 15.0% |
!!! | TAATTTTATGAATTTGTTGA+AGG | + | chr7_4:44424995-44425014 | None:intergenic | 15.0% |
!! | GTAAATTAGAAAAAGAAATA+AGG | + | chr7_4:44425114-44425133 | None:intergenic | 15.0% |
!!! | AAAGAACAAATTTTTTTTAC+CGG | - | chr7_4:44426360-44426379 | Msa1156180:CDS | 15.0% |
!!! | ATTATTATGATTTGTTTTGT+TGG | - | chr7_4:44426740-44426759 | Msa1156180:CDS | 15.0% |
!!! | TTAGACATTTAAAATTGATA+TGG | - | chr7_4:44427101-44427120 | Msa1156180:intron | 15.0% |
!!! | TAAGTTGTTGTTAATTTTAT+GGG | + | chr7_4:44427192-44427211 | None:intergenic | 15.0% |
!!! | ATAAGTTGTTGTTAATTTTA+TGG | + | chr7_4:44427193-44427212 | None:intergenic | 15.0% |
!!! | ATTTTAAATTCCTTCATTTT+TGG | - | chr7_4:44427706-44427725 | Msa1156180:intron | 15.0% |
!! | AATGTATTTCAAAGTAAATA+AGG | + | chr7_4:44427967-44427986 | None:intergenic | 15.0% |
!! | TATATAATACTACAGATTAA+CGG | + | chr7_4:44428036-44428055 | None:intergenic | 15.0% |
!! | AAATATGACATTGTAAAATT+TGG | - | chr7_4:44428078-44428097 | Msa1156180:CDS | 15.0% |
!! | TCAGTAAATTTAAATGATTA+TGG | - | chr7_4:44428219-44428238 | Msa1156180:CDS | 15.0% |
!! | GTTAATTAGTTACTTATTAA+TGG | - | chr7_4:44428344-44428363 | Msa1156180:intron | 15.0% |
!!! | CATTTATTTTGATTGATTTA+TGG | + | chr7_4:44428487-44428506 | None:intergenic | 15.0% |
!!! | CTTTATTTTTTATGCTTTAA+AGG | - | chr7_4:44428766-44428785 | Msa1156180:CDS | 15.0% |
!! | TCTTAAAATTATCACAAAAA+TGG | - | chr7_4:44429207-44429226 | Msa1156180:intron | 15.0% |
!!! | TATCTTATTTATATTTGAGA+AGG | + | chr7_4:44429355-44429374 | None:intergenic | 15.0% |
!!! | TACTCTTTTATATTTTCTTT+TGG | + | chr7_4:44429403-44429422 | None:intergenic | 15.0% |
!! | AGGTATTAAAATAAAATAGA+AGG | - | chr7_4:44429477-44429496 | Msa1156180:intron | 15.0% |
!! | GGTATTAAAATAAAATAGAA+GGG | - | chr7_4:44429478-44429497 | Msa1156180:intron | 15.0% |
!! | TTAATGCATATAAATTAATG+TGG | - | chr7_4:44429745-44429764 | Msa1156180:intron | 15.0% |
!! | AGTGAAAAGTTAGTTAAATT+TGG | - | chr7_4:44417484-44417503 | Msa1156180:intron | 20.0% |
!! | AATAGAAATTTAAACATACG+TGG | + | chr7_4:44417605-44417624 | None:intergenic | 20.0% |
!! | CATTAATATCACATTATCAA+TGG | + | chr7_4:44417929-44417948 | None:intergenic | 20.0% |
!! | ATAATGTGATATTAATGTGT+TGG | - | chr7_4:44417932-44417951 | Msa1156180:intron | 20.0% |
!! | AAATGCAAATTAGTGAAATA+CGG | - | chr7_4:44418267-44418286 | Msa1156180:intron | 20.0% |
!!! | GTTCAAATTTTATAGAATAC+TGG | + | chr7_4:44418456-44418475 | None:intergenic | 20.0% |
!! | TTAATCAAAAGAAATTTGGT+GGG | - | chr7_4:44418524-44418543 | Msa1156180:intron | 20.0% |
!! | TCAAAAGCTAATTAAACTAA+CGG | - | chr7_4:44418708-44418727 | Msa1156180:intron | 20.0% |
!!! | ATCTTTTATAAAACACTGTT+TGG | + | chr7_4:44419329-44419348 | None:intergenic | 20.0% |
!! | AAATTATCCTAATCAACTAT+TGG | + | chr7_4:44419876-44419895 | None:intergenic | 20.0% |
!! | AATAGTTGATTAGGATAATT+TGG | - | chr7_4:44419875-44419894 | Msa1156180:intron | 20.0% |
!! | TCTAAATAGAGAAATATATG+AGG | - | chr7_4:44420342-44420361 | Msa1156180:intron | 20.0% |
!! | ACAAAGAACAAGAAATAAAT+TGG | + | chr7_4:44420680-44420699 | None:intergenic | 20.0% |
!! | ATTAATAGAGGATAGATAAA+AGG | + | chr7_4:44421823-44421842 | None:intergenic | 20.0% |
!!! | CACGTATATTTTATTAATAG+AGG | + | chr7_4:44421835-44421854 | None:intergenic | 20.0% |
!! | CTCTATTAATAAAATATACG+TGG | - | chr7_4:44421833-44421852 | Msa1156180:intron | 20.0% |
!!! | GTCATAACATTAGTTTAAAA+AGG | - | chr7_4:44422182-44422201 | Msa1156180:intron | 20.0% |
!!! | CATAACATTAGTTTAAAAAG+GGG | - | chr7_4:44422184-44422203 | Msa1156180:intron | 20.0% |
!! | AATCAGATAAAAGATAACAA+AGG | + | chr7_4:44422453-44422472 | None:intergenic | 20.0% |
!!! | CAAGGTTTTATTAGAAAATT+TGG | - | chr7_4:44423205-44423224 | Msa1156180:intron | 20.0% |
!!! | AAATTTGGCTATTTTGAATA+AGG | - | chr7_4:44423220-44423239 | Msa1156180:intron | 20.0% |
!! | AAGTAGTAACAATAATAATG+AGG | - | chr7_4:44423516-44423535 | Msa1156180:intron | 20.0% |
!! | AAAAAAAAAACTACCAAAAG+TGG | + | chr7_4:44423854-44423873 | None:intergenic | 20.0% |
!!! | CTTTTGGTAGTTTTTTTTTT+TGG | - | chr7_4:44423854-44423873 | Msa1156180:intron | 20.0% |
!!! | TTTTTTTTTTTGGACACTTT+TGG | - | chr7_4:44423864-44423883 | Msa1156180:intron | 20.0% |
!!! | AAATCTGCTTCAATATTTTT+GGG | - | chr7_4:44424458-44424477 | Msa1156180:intron | 20.0% |
!!! | TATCTAATGTCTTAAGATTT+TGG | - | chr7_4:44424600-44424619 | Msa1156180:intron | 20.0% |
!!! | ATCTAATGTCTTAAGATTTT+GGG | - | chr7_4:44424601-44424620 | Msa1156180:intron | 20.0% |
!!! | AAATCATAATGGAAAAACTA+AGG | + | chr7_4:44425066-44425085 | None:intergenic | 20.0% |
!! | AAAAAGAAATAAGGTGAAAA+GGG | + | chr7_4:44425105-44425124 | None:intergenic | 20.0% |
!! | CTAATATATCCAATATCTTA+AGG | - | chr7_4:44425392-44425411 | Msa1156180:intron | 20.0% |
!! | AATTCAAAACCTTAAGATAT+TGG | + | chr7_4:44425404-44425423 | None:intergenic | 20.0% |
!!! | GAAGGTATTTTAAATAATAG+AGG | + | chr7_4:44425625-44425644 | None:intergenic | 20.0% |
!! | TAAATGAGATGATCAATATA+AGG | - | chr7_4:44426052-44426071 | Msa1156180:intron | 20.0% |
!! | AAATGAGATGATCAATATAA+GGG | - | chr7_4:44426053-44426072 | Msa1156180:intron | 20.0% |
!! | CTTTATTCTTTATAACCTTA+TGG | - | chr7_4:44426335-44426354 | Msa1156180:CDS | 20.0% |
!! | TTATATGACATAGTCAAATA+TGG | + | chr7_4:44426534-44426553 | None:intergenic | 20.0% |
!! | TTGACTATGTCATATAATTA+TGG | - | chr7_4:44426537-44426556 | Msa1156180:CDS | 20.0% |
!!! | CATTTTTATTCCAAATATCT+AGG | + | chr7_4:44426637-44426656 | None:intergenic | 20.0% |
!! | AATAATATTGATACATCTCA+TGG | + | chr7_4:44426726-44426745 | None:intergenic | 20.0% |
!!! | ACATTCATGCAATTTTTTTT+TGG | - | chr7_4:44426824-44426843 | Msa1156180:intron | 20.0% |
!! | GTCAATGTTTCAAATTTAAA+AGG | - | chr7_4:44427924-44427943 | Msa1156180:intron | 20.0% |
!! | AATGCTGACAAAAAAAAAAA+CGG | - | chr7_4:44428113-44428132 | Msa1156180:intron | 20.0% |
!! | GGGATTAAAATAAAATAGAA+GGG | - | chr7_4:44428134-44428153 | Msa1156180:intron | 20.0% |
!! | ATCGTAAAATATAAAAAGTG+AGG | - | chr7_4:44428302-44428321 | Msa1156180:intron | 20.0% |
!! | AGGAAATATGCTAAATTTAA+TGG | - | chr7_4:44428322-44428341 | Msa1156180:intron | 20.0% |
!! | TAGTTAGTAATGCATTTATT+AGG | - | chr7_4:44428372-44428391 | Msa1156180:intron | 20.0% |
!! | ACCATTTGAATTCAATTATT+TGG | - | chr7_4:44428673-44428692 | Msa1156180:CDS | 20.0% |
!! | ACCAAATAATTGAATTCAAA+TGG | + | chr7_4:44428677-44428696 | None:intergenic | 20.0% |
!! | TTCATGTATTAATCATATTG+AGG | - | chr7_4:44428696-44428715 | Msa1156180:CDS | 20.0% |
!! | ATATTGCATAATATATGTAG+GGG | + | chr7_4:44429637-44429656 | None:intergenic | 20.0% |
!! | GATATTGCATAATATATGTA+GGG | + | chr7_4:44429638-44429657 | None:intergenic | 20.0% |
!! | AGATATTGCATAATATATGT+AGG | + | chr7_4:44429639-44429658 | None:intergenic | 20.0% |
!! | AAGAAAAAAGATTGAAAATG+TGG | + | chr7_4:44429706-44429725 | None:intergenic | 20.0% |
!!! | TTCACTTATATTTTTACCGT+TGG | + | chr7_4:44417470-44417489 | None:intergenic | 25.0% |
! | AAACAAAAAAAAGTGATGTG+TGG | - | chr7_4:44417865-44417884 | Msa1156180:intron | 25.0% |
! | GCTATGAATGAAATGTAAAA+TGG | - | chr7_4:44418130-44418149 | Msa1156180:intron | 25.0% |
!!! | ATTTTGGAGTTAGTTTGTTT+TGG | - | chr7_4:44418180-44418199 | Msa1156180:intron | 25.0% |
! | CGTGTAAAAATTATGTATGA+GGG | - | chr7_4:44418203-44418222 | Msa1156180:intron | 25.0% |
!! | GTAATTTTATTGTAAAAGGG+AGG | - | chr7_4:44418234-44418253 | Msa1156180:intron | 25.0% |
! | AAATGGTAGTAATAGGAATT+TGG | - | chr7_4:44418301-44418320 | Msa1156180:intron | 25.0% |
! | GTTAATCAAAAGAAATTTGG+TGG | - | chr7_4:44418523-44418542 | Msa1156180:intron | 25.0% |
!! | TAATCAAAAGAAATTTGGTG+GGG | - | chr7_4:44418525-44418544 | Msa1156180:intron | 25.0% |
! | CAAAAACTAAGTGAAGAAAA+TGG | + | chr7_4:44418578-44418597 | None:intergenic | 25.0% |
!! | TGTTGTTCTTCTCTTTTTAT+TGG | - | chr7_4:44418770-44418789 | Msa1156180:intron | 25.0% |
! | AAAATACCATGTTACAACAA+GGG | + | chr7_4:44418805-44418824 | None:intergenic | 25.0% |
! | TAAAATACCATGTTACAACA+AGG | + | chr7_4:44418806-44418825 | None:intergenic | 25.0% |
!! | CTGTTGAAAAGTATAAAATG+CGG | + | chr7_4:44418874-44418893 | None:intergenic | 25.0% |
!!! | ATAAGGAACTTTTCTAAAAG+TGG | - | chr7_4:44419392-44419411 | Msa1156180:intron | 25.0% |
!! | GAAATAAGGCTAAATTTGTT+TGG | + | chr7_4:44419540-44419559 | None:intergenic | 25.0% |
!!! | GCATAAGTGTTTTAGAAATA+AGG | + | chr7_4:44419554-44419573 | None:intergenic | 25.0% |
!! | TTTTAATGCCAAAATAAGTC+TGG | - | chr7_4:44419596-44419615 | Msa1156180:intron | 25.0% |
! | AAATCACTTTATGGAAAAAC+AGG | + | chr7_4:44419675-44419694 | None:intergenic | 25.0% |
! | GTATAAGGTAAATCACTTTA+TGG | + | chr7_4:44419684-44419703 | None:intergenic | 25.0% |
! | AAACAAACCAATAGTTGATT+AGG | - | chr7_4:44419866-44419885 | Msa1156180:intron | 25.0% |
!! | AAATGAGTTTTCCATACAAA+TGG | + | chr7_4:44420188-44420207 | None:intergenic | 25.0% |
!!! | ATTTTTTTCATTGGTATTGC+AGG | - | chr7_4:44420208-44420227 | Msa1156180:intron | 25.0% |
!!! | TTTTTTTCATTGGTATTGCA+GGG | - | chr7_4:44420209-44420228 | Msa1156180:intron | 25.0% |
! | ATCGGAAAATAGATTTATAG+AGG | + | chr7_4:44420313-44420332 | None:intergenic | 25.0% |
! | CTATTTAGAAGTCATCATAT+CGG | + | chr7_4:44420331-44420350 | None:intergenic | 25.0% |
! | AAGAGATGATAATTGATGAA+AGG | + | chr7_4:44420572-44420591 | None:intergenic | 25.0% |
! | GAAATAAATTGGAATATACC+TGG | + | chr7_4:44420669-44420688 | None:intergenic | 25.0% |
!! | TAAGCATTTACTAGTTTGAA+TGG | + | chr7_4:44420729-44420748 | None:intergenic | 25.0% |
! | AATAAAATCTCACTTCGAAA+AGG | + | chr7_4:44421280-44421299 | None:intergenic | 25.0% |
!!! | CTTGATGTACATTTTTTTCA+AGG | + | chr7_4:44421305-44421324 | None:intergenic | 25.0% |
! | TTAAATATGTGTCTTCTCTT+AGG | - | chr7_4:44421350-44421369 | Msa1156180:intron | 25.0% |
! | TAAATATGTGTCTTCTCTTA+GGG | - | chr7_4:44421351-44421370 | Msa1156180:intron | 25.0% |
! | GACAAGAGAAATAAAGATAA+TGG | + | chr7_4:44421496-44421515 | None:intergenic | 25.0% |
! | TAAGAGTTTAGATTCTGTTA+AGG | + | chr7_4:44421528-44421547 | None:intergenic | 25.0% |
! | AAACTCTTAATTATTTGTGC+AGG | - | chr7_4:44421539-44421558 | Msa1156180:intron | 25.0% |
! | TAACTAAATGACTGTACATA+AGG | + | chr7_4:44421913-44421932 | None:intergenic | 25.0% |
! | TATTCTTTCTGATGATAAGT+AGG | - | chr7_4:44422046-44422065 | Msa1156180:intron | 25.0% |
! | AAGAAAAAGTTGACCATATT+TGG | + | chr7_4:44422109-44422128 | None:intergenic | 25.0% |
! | AAACTAATGTTATGACTTGA+AGG | + | chr7_4:44422143-44422162 | None:intergenic | 25.0% |
! | TAGTTATCAGTGTATTATGT+TGG | - | chr7_4:44422243-44422262 | Msa1156180:intron | 25.0% |
! | ACTTTCATCTCAAATTCATT+TGG | - | chr7_4:44422287-44422306 | Msa1156180:intron | 25.0% |
! | CTTTCATCTCAAATTCATTT+GGG | - | chr7_4:44422288-44422307 | Msa1156180:intron | 25.0% |
! | TCCATCTGTTGTTAATTTAT+TGG | - | chr7_4:44422528-44422547 | Msa1156180:intron | 25.0% |
! | TCCAATAAATTAACAACAGA+TGG | + | chr7_4:44422532-44422551 | None:intergenic | 25.0% |
! | CTTAAAAATATTGTGATCGA+TGG | - | chr7_4:44422652-44422671 | Msa1156180:intron | 25.0% |
! | ACAATTTCAAACAAAAGTCT+TGG | + | chr7_4:44422891-44422910 | None:intergenic | 25.0% |
!!! | GACTTTTGTTTGAAATTGTT+CGG | - | chr7_4:44422892-44422911 | Msa1156180:intron | 25.0% |
!!! | ACTTTTGTTTGAAATTGTTC+GGG | - | chr7_4:44422893-44422912 | Msa1156180:intron | 25.0% |
!!! | AGACAAGTTTGGAATTTTAT+CGG | + | chr7_4:44423144-44423163 | None:intergenic | 25.0% |
! | ATGAAATTGCAAATTAACCA+TGG | - | chr7_4:44423919-44423938 | Msa1156180:intron | 25.0% |
! | TCTTACAAAATCATTAACCA+TGG | + | chr7_4:44423939-44423958 | None:intergenic | 25.0% |
! | TACAATATTCTCTTCCTTTA+AGG | + | chr7_4:44424038-44424057 | None:intergenic | 25.0% |
! | TGTATGTTAAATCTCAACAT+TGG | - | chr7_4:44424068-44424087 | Msa1156180:intron | 25.0% |
! | CTCAACATTGGATAAAATAT+TGG | - | chr7_4:44424080-44424099 | Msa1156180:intron | 25.0% |
! | AACATTGGATAAAATATTGG+AGG | - | chr7_4:44424083-44424102 | Msa1156180:intron | 25.0% |
!! | CAAATCTGCTTCAATATTTT+TGG | - | chr7_4:44424457-44424476 | Msa1156180:intron | 25.0% |
!! | ATTAGGTTGTATCATAACAT+TGG | + | chr7_4:44424668-44424687 | None:intergenic | 25.0% |
! | GTTATGATACAACCTAATAA+AGG | - | chr7_4:44424670-44424689 | Msa1156180:intron | 25.0% |
! | AAAACAAATCGTCATATTGT+TGG | + | chr7_4:44424711-44424730 | None:intergenic | 25.0% |
!!! | GATTTGTTTTGTTAGTCTTA+TGG | - | chr7_4:44424721-44424740 | Msa1156180:intron | 25.0% |
!! | AACATATATTTTGTCAACGT+AGG | + | chr7_4:44424890-44424909 | None:intergenic | 25.0% |
! | GAAAAAGAAATAAGGTGAAA+AGG | + | chr7_4:44425106-44425125 | None:intergenic | 25.0% |
! | AGATAATCAAATAAGCTCAA+AGG | + | chr7_4:44425217-44425236 | None:intergenic | 25.0% |
!!! | TAAGGTTTTGAATTTAGATG+TGG | - | chr7_4:44425410-44425429 | Msa1156180:intron | 25.0% |
!!! | GAGTTTATTTATTTTTTGGG+TGG | - | chr7_4:44425740-44425759 | Msa1156180:CDS | 25.0% |
!!! | TTGGTAATTTTATGGTTTAC+AGG | + | chr7_4:44425782-44425801 | None:intergenic | 25.0% |
!!! | GCGAATTATTGGTAATTTTA+TGG | + | chr7_4:44425790-44425809 | None:intergenic | 25.0% |
! | TTGAAAATAGAGCGAATTAT+TGG | + | chr7_4:44425801-44425820 | None:intergenic | 25.0% |
! | ATCTACAGTTGTATCTAATA+TGG | + | chr7_4:44426019-44426038 | None:intergenic | 25.0% |
! | GGAATGATTAAAAAAATTGC+AGG | + | chr7_4:44426130-44426149 | None:intergenic | 25.0% |
!!! | ATTTTTTCATGTTGTGTCTT+TGG | - | chr7_4:44426162-44426181 | Msa1156180:CDS | 25.0% |
!! | AACACATTAGAACTTTTCTA+TGG | + | chr7_4:44426198-44426217 | None:intergenic | 25.0% |
!! | AAATTTGTTCTTTGTCCATA+AGG | + | chr7_4:44426353-44426372 | None:intergenic | 25.0% |
! | TATATGTATGCCTAGATATT+TGG | - | chr7_4:44426624-44426643 | Msa1156180:intron | 25.0% |
! | TAATATTAATCTCACTTGTG+TGG | - | chr7_4:44426657-44426676 | Msa1156180:intron | 25.0% |
!!! | GAAGAACTTTGAAATAATAG+AGG | + | chr7_4:44426873-44426892 | None:intergenic | 25.0% |
! | AAAGATATGACGTCTTAATT+TGG | + | chr7_4:44426949-44426968 | None:intergenic | 25.0% |
! | ATAAAGAAATTCTTCACCTT+TGG | - | chr7_4:44427007-44427026 | Msa1156180:intron | 25.0% |
!!! | TAATTTTATGGGTTTGTTGA+AGG | + | chr7_4:44427181-44427200 | None:intergenic | 25.0% |
!! | ATGAGTTGAATCATCATATT+CGG | + | chr7_4:44427574-44427593 | None:intergenic | 25.0% |
! | TCTTCAATAGATGTAATATG+TGG | - | chr7_4:44427878-44427897 | Msa1156180:intron | 25.0% |
! | CTTCAATAGATGTAATATGT+GGG | - | chr7_4:44427879-44427898 | Msa1156180:intron | 25.0% |
! | TTTCAAAGTAAATAAGGATG+CGG | + | chr7_4:44427961-44427980 | None:intergenic | 25.0% |
! | ATGCTGACAAAAAAAAAAAC+GGG | - | chr7_4:44428114-44428133 | Msa1156180:intron | 25.0% |
! | CGGGATTAAAATAAAATAGA+AGG | - | chr7_4:44428133-44428152 | Msa1156180:intron | 25.0% |
! | ATAAGCAATTGCATGATTTA+CGG | - | chr7_4:44428279-44428298 | Msa1156180:intron | 25.0% |
!! | CTAAATAAAGCTTGCTTATT+GGG | + | chr7_4:44428601-44428620 | None:intergenic | 25.0% |
!! | TCTAAATAAAGCTTGCTTAT+TGG | + | chr7_4:44428602-44428621 | None:intergenic | 25.0% |
!! | GTACATTTGATAAAAAGCAT+TGG | + | chr7_4:44428747-44428766 | None:intergenic | 25.0% |
! | GTTAAAGAGAACTCAAATAT+CGG | - | chr7_4:44428983-44429002 | Msa1156180:intron | 25.0% |
! | TTAAAGAGAACTCAAATATC+GGG | - | chr7_4:44428984-44429003 | Msa1156180:intron | 25.0% |
!! | ATGCTAATAGCATTTGAAAT+TGG | - | chr7_4:44429099-44429118 | Msa1156180:intron | 25.0% |
!! | TTTGAAATTGGATATGAGAA+AGG | - | chr7_4:44429111-44429130 | Msa1156180:CDS | 25.0% |
! | ATCATTAATGCTCTTTAGAT+TGG | + | chr7_4:44429150-44429169 | None:intergenic | 25.0% |
!!! | CTAAAGAGCATTAATGATTT+TGG | - | chr7_4:44429152-44429171 | Msa1156180:CDS | 25.0% |
! | TTCTTATTCACTCTTCTTAT+TGG | + | chr7_4:44429182-44429201 | None:intergenic | 25.0% |
! | TCCCAGTAATATAAAATAGA+AGG | - | chr7_4:44429511-44429530 | Msa1156180:intron | 25.0% |
!! | CCCTTCTATTTTATATTACT+GGG | + | chr7_4:44429515-44429534 | None:intergenic | 25.0% |
! | CCCAGTAATATAAAATAGAA+GGG | - | chr7_4:44429512-44429531 | Msa1156180:intron | 25.0% |
!! | TCCCTTCTATTTTATATTAC+TGG | + | chr7_4:44429516-44429535 | None:intergenic | 25.0% |
! | AGAAAGTGGTTATATTTGTT+TGG | - | chr7_4:44429538-44429557 | Msa1156180:intron | 25.0% |
!! | CTAAAAAATTCTCCTTTTCA+AGG | - | chr7_4:44429577-44429596 | Msa1156180:intron | 25.0% |
AAAATTGCTTATTCCGCAAA+TGG | - | chr7_4:44417301-44417320 | Msa1156180:intron | 30.0% | |
! | TGCTGAAATTTTCATTCCAA+CGG | - | chr7_4:44417451-44417470 | Msa1156180:intron | 30.0% |
!! | TGTGTTGGATTTTGAAAAGA+TGG | - | chr7_4:44417947-44417966 | Msa1156180:intron | 30.0% |
!! | TTGGATTTTGAAAAGATGGA+TGG | - | chr7_4:44417951-44417970 | Msa1156180:intron | 30.0% |
GCGTGTAAAAATTATGTATG+AGG | - | chr7_4:44418202-44418221 | Msa1156180:intron | 30.0% | |
GAGTACAAAATGGTAGTAAT+AGG | - | chr7_4:44418294-44418313 | Msa1156180:intron | 30.0% | |
!!! | TTTTTGAGTGATCTTGTTGT+AGG | - | chr7_4:44418346-44418365 | Msa1156180:intron | 30.0% |
TTTGAACAAGAGATTGAATG+TGG | - | chr7_4:44418469-44418488 | Msa1156180:intron | 30.0% | |
TTTGATTAACAAATCCAGAG+AGG | + | chr7_4:44418513-44418532 | None:intergenic | 30.0% | |
GTGTTTGTAAAAATGATGCA+AGG | + | chr7_4:44418834-44418853 | None:intergenic | 30.0% | |
ATTCTCTACAGTGTAATGTT+TGG | - | chr7_4:44418915-44418934 | Msa1156180:intron | 30.0% | |
!! | TTGAGATCTTTGATTTTTCG+TGG | + | chr7_4:44419155-44419174 | None:intergenic | 30.0% |
ACGAAAAATCAAAGATCTCA+AGG | - | chr7_4:44419154-44419173 | Msa1156180:intron | 30.0% | |
!! | CTTCTTTTAAGGAGAAGAAA+AGG | + | chr7_4:44419301-44419320 | None:intergenic | 30.0% |
!! | GTTTGGCTTAACTTCTTTTA+AGG | + | chr7_4:44419312-44419331 | None:intergenic | 30.0% |
!! | AAACGACACTCATTTTGAAA+CGG | + | chr7_4:44419712-44419731 | None:intergenic | 30.0% |
TGCACACATATTAAGGAATA+TGG | + | chr7_4:44419932-44419951 | None:intergenic | 30.0% | |
TTCCTTAATATGTGTGCAAT+TGG | - | chr7_4:44419934-44419953 | Msa1156180:intron | 30.0% | |
ATTAGAACTTTGAATACCTC+AGG | + | chr7_4:44420123-44420142 | None:intergenic | 30.0% | |
TAATCTTTCCCCTATGATAA+AGG | - | chr7_4:44420139-44420158 | Msa1156180:intron | 30.0% | |
!!! | CTAGTTTTAGTCCATTTGTA+TGG | - | chr7_4:44420174-44420193 | Msa1156180:intron | 30.0% |
ATGAAGATGAAGATGGAATA+TGG | - | chr7_4:44420429-44420448 | Msa1156180:intron | 30.0% | |
! | TTGATTTTCTGTCAACATAG+AGG | + | chr7_4:44420600-44420619 | None:intergenic | 30.0% |
ATCAAGAATCCTAACTACAA+AGG | - | chr7_4:44420615-44420634 | Msa1156180:intron | 30.0% | |
TCAAGAATCCTAACTACAAA+GGG | - | chr7_4:44420616-44420635 | Msa1156180:intron | 30.0% | |
CTTAAGCCTATCAAATATGT+CGG | - | chr7_4:44420803-44420822 | Msa1156180:intron | 30.0% | |
ATACAAGTCATCACTGAATT+TGG | + | chr7_4:44420864-44420883 | None:intergenic | 30.0% | |
!!! | ACAACTTGTTTTGCATATTC+AGG | + | chr7_4:44421033-44421052 | None:intergenic | 30.0% |
! | CTCAATATCTAACTTGTAAG+TGG | - | chr7_4:44421112-44421131 | Msa1156180:intron | 30.0% |
AGAGAAGACACATATTTAAG+AGG | + | chr7_4:44421349-44421368 | None:intergenic | 30.0% | |
TTAAACTGACCTTTACTTTG+TGG | - | chr7_4:44421380-44421399 | Msa1156180:intron | 30.0% | |
TACATGAACATACACTACTT+CGG | - | chr7_4:44421469-44421488 | Msa1156180:intron | 30.0% | |
ACATAGAGACAGATATAGAA+AGG | - | chr7_4:44421632-44421651 | Msa1156180:intron | 30.0% | |
ATATTGATCGTATGCATGTA+TGG | + | chr7_4:44421664-44421683 | None:intergenic | 30.0% | |
ATTTGTCTTGTCCTCAAAAA+GGG | + | chr7_4:44421719-44421738 | None:intergenic | 30.0% | |
TATTTGTCTTGTCCTCAAAA+AGG | + | chr7_4:44421720-44421739 | None:intergenic | 30.0% | |
AATGACATTATTAGGAATGC+TGG | + | chr7_4:44421866-44421885 | None:intergenic | 30.0% | |
AAGTAGGATAACAGATATAG+AGG | - | chr7_4:44422062-44422081 | Msa1156180:intron | 30.0% | |
! | AATGTTTTCTTTTGATGTGC+AGG | - | chr7_4:44422403-44422422 | Msa1156180:intron | 30.0% |
GGAACATACTACAAATATCA+AGG | + | chr7_4:44422511-44422530 | None:intergenic | 30.0% | |
!!! | AACACTTGTTTTTGTACATC+AGG | + | chr7_4:44422707-44422726 | None:intergenic | 30.0% |
TCTAACGCAATTTAAATGCA+TGG | - | chr7_4:44422752-44422771 | Msa1156180:intron | 30.0% | |
GTAAATCACATTCAATGGAT+TGG | - | chr7_4:44422774-44422793 | Msa1156180:intron | 30.0% | |
!! | ACATTCAATGGATTGGTTAA+TGG | - | chr7_4:44422781-44422800 | Msa1156180:intron | 30.0% |
CAAATGAACACAATTAACTC+TGG | - | chr7_4:44422835-44422854 | Msa1156180:intron | 30.0% | |
ATTTCAAACAAAAGTCTTGG+CGG | + | chr7_4:44422888-44422907 | None:intergenic | 30.0% | |
!! | CTTTTGTTTGAAATTGTTCG+GGG | - | chr7_4:44422894-44422913 | Msa1156180:intron | 30.0% |
!! | TTTTGTTTGAAATTGTTCGG+GGG | - | chr7_4:44422895-44422914 | Msa1156180:intron | 30.0% |
! | TATTGAAGATTTTGTCCAAC+AGG | + | chr7_4:44423001-44423020 | None:intergenic | 30.0% |
AATCTTCAATACTGTGTTAG+TGG | - | chr7_4:44423010-44423029 | Msa1156180:intron | 30.0% | |
AATTCAGCAATGCAATAAGA+TGG | - | chr7_4:44423118-44423137 | Msa1156180:intron | 30.0% | |
ATTCCAAACTTGTCTAAAGA+TGG | - | chr7_4:44423149-44423168 | Msa1156180:intron | 30.0% | |
TAACCATCTTTAGACAAGTT+TGG | + | chr7_4:44423155-44423174 | None:intergenic | 30.0% | |
! | ATATTCTTGTCAAGTTGTCT+CGG | + | chr7_4:44423308-44423327 | None:intergenic | 30.0% |
! | TTTGAAATACCACAGTAACA+GGG | + | chr7_4:44423343-44423362 | None:intergenic | 30.0% |
! | ATTTGAAATACCACAGTAAC+AGG | + | chr7_4:44423344-44423363 | None:intergenic | 30.0% |
ATTGGCAATTATCTTACCAT+TGG | + | chr7_4:44423429-44423448 | None:intergenic | 30.0% | |
AACATGTTACAGAACAACAA+AGG | - | chr7_4:44423493-44423512 | Msa1156180:intron | 30.0% | |
CTCTATTGAGTTAGTTGATT+CGG | - | chr7_4:44423579-44423598 | Msa1156180:intron | 30.0% | |
GTTGAATAGCTAGACTTTAA+TGG | - | chr7_4:44423801-44423820 | Msa1156180:intron | 30.0% | |
TAGAATTTCGTCATCCTTAA+AGG | - | chr7_4:44424021-44424040 | Msa1156180:intron | 30.0% | |
! | ATGTGAAATGTCATTTCTGT+AGG | + | chr7_4:44424253-44424272 | None:intergenic | 30.0% |
ACAGAAATGACATTTCACAT+CGG | - | chr7_4:44424253-44424272 | Msa1156180:intron | 30.0% | |
TTGAAATCGACATTTCACAT+CGG | - | chr7_4:44424276-44424295 | Msa1156180:intron | 30.0% | |
! | AACATCAGCTTTAGTTACAT+CGG | + | chr7_4:44424309-44424328 | None:intergenic | 30.0% |
ATGCAATAGTGTGAAAAGAT+AGG | - | chr7_4:44424417-44424436 | Msa1156180:intron | 30.0% | |
GAAAAGATAGGATTTCACAT+CGG | - | chr7_4:44424429-44424448 | Msa1156180:intron | 30.0% | |
! | ATATTGTTGGAACTTTTCGT+GGG | + | chr7_4:44424698-44424717 | None:intergenic | 30.0% |
! | GAAGGAATTTAAAGTAACAG+AGG | + | chr7_4:44424816-44424835 | None:intergenic | 30.0% |
TGAAGGAGTTGAAAATTACT+TGG | + | chr7_4:44424978-44424997 | None:intergenic | 30.0% | |
!! | GCTTTATTTGTGAGAGTATA+GGG | + | chr7_4:44425036-44425055 | None:intergenic | 30.0% |
!! | TGCTTTATTTGTGAGAGTAT+AGG | + | chr7_4:44425037-44425056 | None:intergenic | 30.0% |
!! | TCTCTTTTCTTCTGAAAGAA+AGG | - | chr7_4:44425136-44425155 | Msa1156180:intron | 30.0% |
AACAAGGTAAAAAATGTGGA+TGG | + | chr7_4:44425191-44425210 | None:intergenic | 30.0% | |
GTGATGATCAAACCTATTAT+AGG | - | chr7_4:44425469-44425488 | Msa1156180:intron | 30.0% | |
CCACAAAAAATCAAAAGTGA+AGG | + | chr7_4:44425643-44425662 | None:intergenic | 30.0% | |
!!! | CCTTCACTTTTGATTTTTTG+TGG | - | chr7_4:44425640-44425659 | Msa1156180:intron | 30.0% |
! | ATTTTATGGTTTACAGGAGT+TGG | + | chr7_4:44425776-44425795 | None:intergenic | 30.0% |
! | CTCTATTTTCAATGTTTCCA+CGG | - | chr7_4:44425809-44425828 | Msa1156180:intron | 30.0% |
GAGATTGTGATAAATGATAC+CGG | + | chr7_4:44426382-44426401 | None:intergenic | 30.0% | |
! | ACAAGATAAAAAAGGTTGGT+TGG | + | chr7_4:44426496-44426515 | None:intergenic | 30.0% |
CACAACAAGATAAAAAAGGT+TGG | + | chr7_4:44426500-44426519 | None:intergenic | 30.0% | |
GATGCACAACAAGATAAAAA+AGG | + | chr7_4:44426504-44426523 | None:intergenic | 30.0% | |
!! | TAACTACTTTTCTCCTTTTC+CGG | + | chr7_4:44426915-44426934 | None:intergenic | 30.0% |
AAAGGAGAAAAGTAGTTATG+AGG | - | chr7_4:44426917-44426936 | Msa1156180:CDS | 30.0% | |
! | ATATGACGTCTTAATTTGGT+TGG | + | chr7_4:44426945-44426964 | None:intergenic | 30.0% |
! | CTTTTGTAAGATCTCACAAA+AGG | - | chr7_4:44427031-44427050 | Msa1156180:intron | 30.0% |
CCTTAAGACATTAGGTATAT+GGG | + | chr7_4:44427503-44427522 | None:intergenic | 30.0% | |
ACCTTAAGACATTAGGTATA+TGG | + | chr7_4:44427504-44427523 | None:intergenic | 30.0% | |
! | TACCTAATGTCTTAAGGTTT+TGG | - | chr7_4:44427506-44427525 | Msa1156180:intron | 30.0% |
! | ACCTAATGTCTTAAGGTTTT+GGG | - | chr7_4:44427507-44427526 | Msa1156180:intron | 30.0% |
!!! | TAAGGTTTTGGGTCAAAATA+TGG | - | chr7_4:44427518-44427537 | Msa1156180:intron | 30.0% |
!!! | ATTCCTTCATTTTTGGTCTT+TGG | - | chr7_4:44427713-44427732 | Msa1156180:intron | 30.0% |
!!! | TTCATTTTTGGTCTTTGGTA+GGG | - | chr7_4:44427718-44427737 | Msa1156180:intron | 30.0% |
!! | ATTCCTTCACTTTTGATCTT+TGG | - | chr7_4:44424828-44424847 | Msa1156180:intron | 30.0% |
TTACCAAAGATCAAAAGTGA+AGG | + | chr7_4:44427814-44427833 | None:intergenic | 30.0% | |
TAAGGTTAATAAAGACACAG+AGG | - | chr7_4:44428175-44428194 | Msa1156180:CDS | 30.0% | |
! | GTGATTTTTATGAAGTCATG+TGG | + | chr7_4:44428259-44428278 | None:intergenic | 30.0% |
CCAAAAACATTTAACCTGTA+AGG | + | chr7_4:44428454-44428473 | None:intergenic | 30.0% | |
! | CCTTACAGGTTAAATGTTTT+TGG | - | chr7_4:44428451-44428470 | Msa1156180:intron | 30.0% |
AATGGTTAATAAGCTCTCTA+AGG | + | chr7_4:44428659-44428678 | None:intergenic | 30.0% | |
ATAATAATTTCCCAACCACT+CGG | - | chr7_4:44428807-44428826 | Msa1156180:intron | 30.0% | |
TAAAGAGAACTCAAATATCG+GGG | - | chr7_4:44428985-44429004 | Msa1156180:intron | 30.0% | |
ATTAGCATCTTATATAGAGG+AGG | + | chr7_4:44429087-44429106 | None:intergenic | 30.0% | |
GCTATTAGCATCTTATATAG+AGG | + | chr7_4:44429090-44429109 | None:intergenic | 30.0% | |
!!! | CTCAAAGTGGTTTTTTACTT+TGG | + | chr7_4:44429270-44429289 | None:intergenic | 30.0% |
!!! | TTTCTTTTGGTGCTTAGATT+TGG | + | chr7_4:44429390-44429409 | None:intergenic | 30.0% |
!! | TCCTTTTCAAGGATAATAAG+TGG | - | chr7_4:44429588-44429607 | Msa1156180:intron | 30.0% |
!! | CCTTTTCAAGGATAATAAGT+GGG | - | chr7_4:44429589-44429608 | Msa1156180:intron | 30.0% |
!! | CTTTTCAAGGATAATAAGTG+GGG | - | chr7_4:44429590-44429609 | Msa1156180:intron | 30.0% |
! | TTTAAGTTATAAGTGTCCCA+TGG | + | chr7_4:44429681-44429700 | None:intergenic | 30.0% |
CACGTTTAATGCACAATATT+AGG | - | chr7_4:44429787-44429806 | Msa1156180:CDS | 30.0% | |
CAAAAAAAAGTGATGTGTGG+TGG | - | chr7_4:44417868-44417887 | Msa1156180:intron | 35.0% | |
CAACAAGTACCTTTATCATC+TGG | + | chr7_4:44418064-44418083 | None:intergenic | 35.0% | |
TGCAAATTAGTGAAATACGG+TGG | - | chr7_4:44418270-44418289 | Msa1156180:intron | 35.0% | |
GCAAATTAGTGAAATACGGT+GGG | - | chr7_4:44418271-44418290 | Msa1156180:intron | 35.0% | |
CAAATTAGTGAAATACGGTG+GGG | - | chr7_4:44418272-44418291 | Msa1156180:intron | 35.0% | |
GTTTGGCATCATTAGATGTT+TGG | + | chr7_4:44418375-44418394 | None:intergenic | 35.0% | |
GAATAAGCAACACACCTATA+TGG | + | chr7_4:44418556-44418575 | None:intergenic | 35.0% | |
AAAAGAGAAGAACAACAGCA+TGG | + | chr7_4:44418767-44418786 | None:intergenic | 35.0% | |
ATGTTTGGACCAGATTTATG+TGG | - | chr7_4:44418930-44418949 | Msa1156180:intron | 35.0% | |
TTACCAAGGTCAAAATTACC+CGG | - | chr7_4:44418986-44419005 | Msa1156180:intron | 35.0% | |
TCAAAATTACCCGGTAAAGA+AGG | - | chr7_4:44418995-44419014 | Msa1156180:intron | 35.0% | |
GAATATCCCAATCTGTATAC+AGG | + | chr7_4:44419127-44419146 | None:intergenic | 35.0% | |
!! | GATCTTTGATTTTTCGTGGA+GGG | + | chr7_4:44419151-44419170 | None:intergenic | 35.0% |
!! | AGATCTTTGATTTTTCGTGG+AGG | + | chr7_4:44419152-44419171 | None:intergenic | 35.0% |
CAAAGATCTCAAGGCAAAAA+AGG | - | chr7_4:44419163-44419182 | Msa1156180:intron | 35.0% | |
! | AAAGCACCATGTTATGCTAA+AGG | + | chr7_4:44419234-44419253 | None:intergenic | 35.0% |
!!! | CTCTAAAGCTACTTTTGATC+TGG | - | chr7_4:44419265-44419284 | Msa1156180:intron | 35.0% |
!! | CTTTTCTAAAAGTGGTTGAG+AGG | - | chr7_4:44419400-44419419 | Msa1156180:intron | 35.0% |
TAAGACTCTTAAGCTACGTT+TGG | + | chr7_4:44419622-44419641 | None:intergenic | 35.0% | |
AGCCAATTGCACACATATTA+AGG | + | chr7_4:44419939-44419958 | None:intergenic | 35.0% | |
!! | AAGCGACACTCATTTTGAAA+CGG | - | chr7_4:44419960-44419979 | Msa1156180:intron | 35.0% |
ACATTTAGGTCTCATTGTTG+CGG | - | chr7_4:44419991-44420010 | Msa1156180:intron | 35.0% | |
CTCTTGTTCCTTTATCATAG+GGG | + | chr7_4:44420150-44420169 | None:intergenic | 35.0% | |
CCTCTTGTTCCTTTATCATA+GGG | + | chr7_4:44420151-44420170 | None:intergenic | 35.0% | |
TCCTCTTGTTCCTTTATCAT+AGG | + | chr7_4:44420152-44420171 | None:intergenic | 35.0% | |
! | TCTGAATTAGCCTGATAGTT+GGG | - | chr7_4:44420406-44420425 | Msa1156180:intron | 35.0% |
ATGAAGATGGAATATGGAAG+AGG | - | chr7_4:44420435-44420454 | Msa1156180:intron | 35.0% | |
! | TATGCTGGATTTGGTATCTT+TGG | + | chr7_4:44420461-44420480 | None:intergenic | 35.0% |
ATACCAAATCCAGCATACAA+AGG | - | chr7_4:44420464-44420483 | Msa1156180:intron | 35.0% | |
!! | AGGTTTGTTGATAAAGTTGC+AGG | - | chr7_4:44420501-44420520 | Msa1156180:intron | 35.0% |
ATCCTAACTACAAAGGGAAA+TGG | - | chr7_4:44420622-44420641 | Msa1156180:intron | 35.0% | |
TTCCATTTCCCTTTGTAGTT+AGG | + | chr7_4:44420627-44420646 | None:intergenic | 35.0% | |
ATACCTGGATTATCAATCCA+TGG | + | chr7_4:44420654-44420673 | None:intergenic | 35.0% | |
AGGCTTAAGCACATAAAGAT+CGG | + | chr7_4:44420792-44420811 | None:intergenic | 35.0% | |
TCTATGCCGACATATTTGAT+AGG | + | chr7_4:44420812-44420831 | None:intergenic | 35.0% | |
AATATGTCGGCATAGAAGTT+TGG | - | chr7_4:44420816-44420835 | Msa1156180:intron | 35.0% | |
!!! | TAATGCATATATTTTGGCCC+AGG | - | chr7_4:44420963-44420982 | Msa1156180:intron | 35.0% |
!!! | TATATTTTGGCCCAGGTTAA+AGG | - | chr7_4:44420970-44420989 | Msa1156180:intron | 35.0% |
! | TCTAACTTGTAAGTGGCAAT+TGG | - | chr7_4:44421119-44421138 | Msa1156180:intron | 35.0% |
! | CTAACTTGTAAGTGGCAATT+GGG | - | chr7_4:44421120-44421139 | Msa1156180:intron | 35.0% |
CAGCGAAAAATCAATACACA+CGG | + | chr7_4:44421185-44421204 | None:intergenic | 35.0% | |
! | GATTGAAAAAGAGGCTTTTG+AGG | - | chr7_4:44421410-44421429 | Msa1156180:intron | 35.0% |
GAAAATAAGAAAAGCCCAAG+AGG | - | chr7_4:44421440-44421459 | Msa1156180:intron | 35.0% | |
TAGATTCTGTTAAGGCAACA+AGG | + | chr7_4:44421520-44421539 | None:intergenic | 35.0% | |
CTCTTAATTATTTGTGCAGG+AGG | - | chr7_4:44421542-44421561 | Msa1156180:intron | 35.0% | |
AATAGCACAGATACTCAGAT+TGG | - | chr7_4:44421736-44421755 | Msa1156180:intron | 35.0% | |
GATAATCATCCATGTAATCG+CGG | + | chr7_4:44422000-44422019 | None:intergenic | 35.0% | |
!!! | CAGATATAGAGGTGTCATTT+TGG | - | chr7_4:44422073-44422092 | Msa1156180:intron | 35.0% |
!!! | ATATAGAGGTGTCATTTTGG+TGG | - | chr7_4:44422076-44422095 | Msa1156180:intron | 35.0% |
TGGTGGTCAATTTCCAAATA+TGG | - | chr7_4:44422093-44422112 | Msa1156180:intron | 35.0% | |
TGAACTCTGATGGTATAAAG+CGG | - | chr7_4:44422427-44422446 | Msa1156180:intron | 35.0% | |
AAACTCGTGCACATTACAAT+AGG | + | chr7_4:44422599-44422618 | None:intergenic | 35.0% | |
!!! | GTAATGTGCACGAGTTTTTT+AGG | - | chr7_4:44422602-44422621 | Msa1156180:intron | 35.0% |
GCATGGTAAATCACATTCAA+TGG | - | chr7_4:44422769-44422788 | Msa1156180:intron | 35.0% | |
! | TTTGGTTGATATAGACCTGT+TGG | - | chr7_4:44422983-44423002 | Msa1156180:intron | 35.0% |
TCAATACTGTGTTAGTGGAA+AGG | - | chr7_4:44423015-44423034 | Msa1156180:intron | 35.0% | |
CAATACTGTGTTAGTGGAAA+GGG | - | chr7_4:44423016-44423035 | Msa1156180:intron | 35.0% | |
CTACCATTGTTGCAGAATAA+CGG | + | chr7_4:44423083-44423102 | None:intergenic | 35.0% | |
AAGGAAACTGAGTATAGTAG+AGG | - | chr7_4:44423239-44423258 | Msa1156180:intron | 35.0% | |
CTCTGAATCATGTTTCTCAT+TGG | + | chr7_4:44423447-44423466 | None:intergenic | 35.0% | |
CAATGAGAAACATGATTCAG+AGG | - | chr7_4:44423445-44423464 | Msa1156180:intron | 35.0% | |
TGTTCTGTAACATGTTCTCT+TGG | + | chr7_4:44423489-44423508 | None:intergenic | 35.0% | |
TTGCAATTGCTTACTGCAAA+AGG | + | chr7_4:44423640-44423659 | None:intergenic | 35.0% | |
! | TTACAAAGTGTTCCCATTAG+TGG | - | chr7_4:44423664-44423683 | Msa1156180:intron | 35.0% |
!! | CTGAACTGGTTTGTATTTCT+TGG | - | chr7_4:44423747-44423766 | Msa1156180:intron | 35.0% |
! | TAGCTATTCAACACTTGCTA+TGG | + | chr7_4:44423793-44423812 | None:intergenic | 35.0% |
! | AGTGTTCTTTGTACCACTTT+TGG | - | chr7_4:44423838-44423857 | Msa1156180:intron | 35.0% |
!! | AGTTTTGATGCTCTCTCTTT+TGG | - | chr7_4:44423888-44423907 | Msa1156180:intron | 35.0% |
! | AATGTCATTTCTGTAGGAGT+GGG | + | chr7_4:44424247-44424266 | None:intergenic | 35.0% |
! | AAATGTCATTTCTGTAGGAG+TGG | + | chr7_4:44424248-44424267 | None:intergenic | 35.0% |
TGAAATCGACATTTCACATC+GGG | - | chr7_4:44424277-44424296 | Msa1156180:intron | 35.0% | |
TGGTTTACGACATATCACAA+CGG | + | chr7_4:44424365-44424384 | None:intergenic | 35.0% | |
TGATATGTCGTAAACCACAT+CGG | - | chr7_4:44424368-44424387 | Msa1156180:intron | 35.0% | |
!!! | GCTTCAATATTTTTGGGAAG+CGG | - | chr7_4:44424464-44424483 | Msa1156180:intron | 35.0% |
! | TTTTCGTGGGAACCTTTATT+AGG | + | chr7_4:44424685-44424704 | None:intergenic | 35.0% |
! | CATATTGTTGGAACTTTTCG+TGG | + | chr7_4:44424699-44424718 | None:intergenic | 35.0% |
GGTCTAAAGATCAAAAGTGA+AGG | + | chr7_4:44424834-44424853 | None:intergenic | 35.0% | |
GTACACGAGACAAATCATAA+TGG | + | chr7_4:44425077-44425096 | None:intergenic | 35.0% | |
AAGACATCCATCTATGAAAC+TGG | - | chr7_4:44425163-44425182 | Msa1156180:intron | 35.0% | |
GCACAACAAGGTAAAAAATG+TGG | + | chr7_4:44425195-44425214 | None:intergenic | 35.0% | |
TACAGATAGTCTAACACTTG+AGG | - | chr7_4:44425251-44425270 | Msa1156180:intron | 35.0% | |
ACAGATAGTCTAACACTTGA+GGG | - | chr7_4:44425252-44425271 | Msa1156180:intron | 35.0% | |
! | GTTCTTAGAGTGCCTATAAT+AGG | + | chr7_4:44425484-44425503 | None:intergenic | 35.0% |
GTTGGTTGTGATTTAATGGA+GGG | + | chr7_4:44426478-44426497 | None:intergenic | 35.0% | |
! | GTTGGTTGGTTGTGATTTAA+TGG | + | chr7_4:44426482-44426501 | None:intergenic | 35.0% |
TCTTCCCCATTATTAGAGTA+TGG | - | chr7_4:44426888-44426907 | Msa1156180:intron | 35.0% | |
CTTCCCCATTATTAGAGTAT+GGG | - | chr7_4:44426889-44426908 | Msa1156180:intron | 35.0% | |
GAGATCTTACAAAAGACCAA+AGG | + | chr7_4:44427026-44427045 | None:intergenic | 35.0% | |
! | GTTGAAGGAGTTTGAGATTA+TGG | + | chr7_4:44427166-44427185 | None:intergenic | 35.0% |
!! | TAAAAAAGGTGGGTTGATGA+CGG | + | chr7_4:44427328-44427347 | None:intergenic | 35.0% |
CATACCATGGTAAAAAAGGT+GGG | + | chr7_4:44427338-44427357 | None:intergenic | 35.0% | |
GAGATACCTAATAAGGTTAG+AGG | + | chr7_4:44427361-44427380 | None:intergenic | 35.0% | |
! | ACTTGGTGAGATACCTAATA+AGG | + | chr7_4:44427368-44427387 | None:intergenic | 35.0% |
GACTCTTTGTATTTGTGACT+TGG | + | chr7_4:44427385-44427404 | None:intergenic | 35.0% | |
TGTGAGTTAACCTTCTACAT+TGG | - | chr7_4:44427438-44427457 | Msa1156180:intron | 35.0% | |
CCCATATACCTAATGTCTTA+AGG | - | chr7_4:44427500-44427519 | Msa1156180:intron | 35.0% | |
ACCCAAAACCTTAAGACATT+AGG | + | chr7_4:44427511-44427530 | None:intergenic | 35.0% | |
! | TATGGTGTCAATCTCATTTG+TGG | - | chr7_4:44427536-44427555 | Msa1156180:intron | 35.0% |
! | ATGGTGTCAATCTCATTTGT+GGG | - | chr7_4:44427537-44427556 | Msa1156180:intron | 35.0% |
CTACCAAAGACCAAAAATGA+AGG | + | chr7_4:44427719-44427738 | None:intergenic | 35.0% | |
!!! | CTTCATTTTTGGTCTTTGGT+AGG | - | chr7_4:44427717-44427736 | Msa1156180:intron | 35.0% |
! | AAGACATTGACGTTTTTCCA+TGG | + | chr7_4:44427750-44427769 | None:intergenic | 35.0% |
ATAAAATAGAAGGGAGCAGA+TGG | - | chr7_4:44428143-44428162 | Msa1156180:CDS | 35.0% | |
AGCAGATGGAGTAGTAAATA+AGG | - | chr7_4:44428157-44428176 | Msa1156180:CDS | 35.0% | |
AGAGGAAAAGACGTAATCAA+TGG | - | chr7_4:44428193-44428212 | Msa1156180:CDS | 35.0% | |
AAAGAGAACTCAAATATCGG+GGG | - | chr7_4:44428986-44429005 | Msa1156180:intron | 35.0% | |
!!! | AGTGGTTTTTTACTTTGGAG+TGG | + | chr7_4:44429265-44429284 | None:intergenic | 35.0% |
AATCGAGATCAAACTCAAAG+TGG | + | chr7_4:44429283-44429302 | None:intergenic | 35.0% | |
AGAAAAAGCAGCGAGTATTA+AGG | - | chr7_4:44429457-44429476 | Msa1156180:intron | 35.0% | |
AAATAGAAGGGAGTAGAAAG+TGG | - | chr7_4:44429524-44429543 | Msa1156180:intron | 35.0% | |
CCCACTTATTATCCTTGAAA+AGG | + | chr7_4:44429592-44429611 | None:intergenic | 35.0% | |
TGCATAATATATGTAGGGGT+CGG | + | chr7_4:44429633-44429652 | None:intergenic | 35.0% | |
!!! | TGTGTACCTTTTTTCGTGTA+TGG | - | chr7_4:44429810-44429829 | Msa1156180:CDS | 35.0% |
ATTGCTTATTCCGCAAATGG+CGG | - | chr7_4:44417304-44417323 | Msa1156180:intron | 40.0% | |
!!! | ATCTTCGAAGAGCGTTTTGA+AGG | - | chr7_4:44417401-44417420 | Msa1156180:intron | 40.0% |
! | GTTTGATATGCCAACTTGCT+TGG | + | chr7_4:44417849-44417868 | None:intergenic | 40.0% |
GAACAAGAGATTGAATGTGG+TGG | - | chr7_4:44418472-44418491 | Msa1156180:intron | 40.0% | |
!! | AAAGTAGAGGTCATTTTGCG+AGG | + | chr7_4:44418642-44418661 | None:intergenic | 40.0% |
GAAGAACAACAGCATGGATA+TGG | + | chr7_4:44418761-44418780 | None:intergenic | 40.0% | |
GTGTCTGTTCCACATAAATC+TGG | + | chr7_4:44418942-44418961 | None:intergenic | 40.0% | |
CTTGGTAAGAGACTATGACA+TGG | + | chr7_4:44418974-44418993 | None:intergenic | 40.0% | |
CATGTCATAGTCTCTTACCA+AGG | - | chr7_4:44418972-44418991 | Msa1156180:intron | 40.0% | |
!! | TTACCGGGTAATTTTGACCT+TGG | + | chr7_4:44418992-44419011 | None:intergenic | 40.0% |
AGAACACTGTATGTAGCATC+TGG | + | chr7_4:44419074-44419093 | None:intergenic | 40.0% | |
AGATGCTACATACAGTGTTC+TGG | - | chr7_4:44419073-44419092 | Msa1156180:intron | 40.0% | |
GATAATAGAGAGCGAGATTC+CGG | - | chr7_4:44419098-44419117 | Msa1156180:intron | 40.0% | |
CACTGTCCTTTAGCATAACA+TGG | - | chr7_4:44419225-44419244 | Msa1156180:intron | 40.0% | |
! | ACGTTTGGCCAGACTTATTT+TGG | + | chr7_4:44419607-44419626 | None:intergenic | 40.0% |
! | TTTGAAACGGAGGGAGTATA+AGG | + | chr7_4:44419699-44419718 | None:intergenic | 40.0% |
!!! | GACACTCATTTTGAAACGGA+GGG | + | chr7_4:44419964-44419983 | None:intergenic | 40.0% |
!!! | GACACTCATTTTGAAACGGA+GGG | - | chr7_4:44419964-44419983 | Msa1156180:intron | 40.0% |
AAACGGAGGGAGTAACATTT+AGG | - | chr7_4:44419977-44419996 | Msa1156180:intron | 40.0% | |
CCCTATGATAAAGGAACAAG+AGG | - | chr7_4:44420148-44420167 | Msa1156180:intron | 40.0% | |
TTGGATCAGGAATTTCTGCT+GGG | + | chr7_4:44420247-44420266 | None:intergenic | 40.0% | |
TTTGGATCAGGAATTTCTGC+TGG | + | chr7_4:44420248-44420267 | None:intergenic | 40.0% | |
AGCAGAAATTCCTGATCCAA+AGG | - | chr7_4:44420247-44420266 | Msa1156180:intron | 40.0% | |
! | CAACTAACCTCTTTAGCCTT+TGG | + | chr7_4:44420266-44420285 | None:intergenic | 40.0% |
! | AGGTTAGTTGAGTAGAAGAG+TGG | - | chr7_4:44420276-44420295 | Msa1156180:intron | 40.0% |
! | CTCTGAATTAGCCTGATAGT+TGG | - | chr7_4:44420405-44420424 | Msa1156180:intron | 40.0% |
TCATCTTCATCCCAACTATC+AGG | + | chr7_4:44420419-44420438 | None:intergenic | 40.0% | |
AGTTGGGATGAAGATGAAGA+TGG | - | chr7_4:44420422-44420441 | Msa1156180:intron | 40.0% | |
CAACAAACCTTTCGTTTCCA+TGG | + | chr7_4:44420491-44420510 | None:intergenic | 40.0% | |
AAGGGAAATGGAAAACTCCA+TGG | - | chr7_4:44420634-44420653 | Msa1156180:intron | 40.0% | |
! | ACTCCATGGATTGATAATCC+AGG | - | chr7_4:44420648-44420667 | Msa1156180:intron | 40.0% |
!! | CATCTTCAAACTCTGAGACA+CGG | + | chr7_4:44420766-44420785 | None:intergenic | 40.0% |
GCTTAAGCACATAAAGATCG+GGG | + | chr7_4:44420790-44420809 | None:intergenic | 40.0% | |
GGCTTAAGCACATAAAGATC+GGG | + | chr7_4:44420791-44420810 | None:intergenic | 40.0% | |
ATCCATTCAGCCTAATAGCT+CGG | + | chr7_4:44420925-44420944 | None:intergenic | 40.0% | |
CAAAAAACTCACCTCTCTGT+TGG | + | chr7_4:44421070-44421089 | None:intergenic | 40.0% | |
!!! | CGTGTGTATTGATTTTTCGC+TGG | - | chr7_4:44421183-44421202 | Msa1156180:intron | 40.0% |
TCTCACTTCGAAAAGGCTTA+AGG | + | chr7_4:44421273-44421292 | None:intergenic | 40.0% | |
! | TCTGAGATGCCACAAAGTAA+AGG | + | chr7_4:44421392-44421411 | None:intergenic | 40.0% |
GGCATCTCAGATTGAAAAAG+AGG | - | chr7_4:44421401-44421420 | Msa1156180:intron | 40.0% | |
AATAAGAAAAGCCCAAGAGG+AGG | - | chr7_4:44421443-44421462 | Msa1156180:intron | 40.0% | |
ATCTGTCTCTATGTCTGTCA+CGG | + | chr7_4:44421626-44421645 | None:intergenic | 40.0% | |
! | GAACATTCACTCCCTTTTTG+AGG | - | chr7_4:44421705-44421724 | Msa1156180:intron | 40.0% |
ACATAAGGCTCAACTCAAAG+TGG | + | chr7_4:44421898-44421917 | None:intergenic | 40.0% | |
ATAGGCTTTGCAACAATGCT+TGG | + | chr7_4:44422581-44422600 | None:intergenic | 40.0% | |
TCTTGGCGGCTAATATTCTT+GGG | + | chr7_4:44422874-44422893 | None:intergenic | 40.0% | |
! | GAGGAATCATCTAAAGCTAG+TGG | + | chr7_4:44422929-44422948 | None:intergenic | 40.0% |
!! | AGCTTTAGATGATTCCTCAG+AGG | - | chr7_4:44422931-44422950 | Msa1156180:intron | 40.0% |
CTCTGATCATAGTGACCAAA+TGG | + | chr7_4:44422962-44422981 | None:intergenic | 40.0% | |
! | GGTCACTATGATCAGAGTTT+TGG | - | chr7_4:44422965-44422984 | Msa1156180:intron | 40.0% |
GAAGATCATGCCTTCAATGT+GGG | - | chr7_4:44423038-44423057 | Msa1156180:intron | 40.0% | |
CGTTATTCTGCAACAATGGT+AGG | - | chr7_4:44423081-44423100 | Msa1156180:intron | 40.0% | |
TGCATTGCTGAATTGAATGC+TGG | + | chr7_4:44423112-44423131 | None:intergenic | 40.0% | |
!! | TAGTAGAGGTACTGTAACTG+TGG | - | chr7_4:44423253-44423272 | Msa1156180:intron | 40.0% |
! | GGAAAAGCAACAGTTAGTCT+CGG | - | chr7_4:44423274-44423293 | Msa1156180:intron | 40.0% |
TACCACAGTAACAGGGATAT+TGG | + | chr7_4:44423336-44423355 | None:intergenic | 40.0% | |
GCAACTCTACAAACTTCCAA+TGG | - | chr7_4:44423410-44423429 | Msa1156180:intron | 40.0% | |
TGAGGCTGCTGATAAGAATA+TGG | - | chr7_4:44423534-44423553 | Msa1156180:intron | 40.0% | |
!! | CTTACTGCAAAAGGTATCTC+TGG | + | chr7_4:44423631-44423650 | None:intergenic | 40.0% |
! | AAAGTGTTCCCATTAGTGGT+TGG | - | chr7_4:44423668-44423687 | Msa1156180:intron | 40.0% |
CTCTCTATCCAACCACTAAT+GGG | + | chr7_4:44423679-44423698 | None:intergenic | 40.0% | |
!! | TACTAGTTCTGTTGCTGAAC+TGG | - | chr7_4:44423733-44423752 | Msa1156180:intron | 40.0% |
ACTTTAATGGTAGCACTCAG+TGG | - | chr7_4:44423814-44423833 | Msa1156180:intron | 40.0% | |
ACGTCATTCACTTGTCACAT+CGG | - | chr7_4:44424331-44424350 | Msa1156180:intron | 40.0% | |
GATATGTCGTAAACCACATC+GGG | - | chr7_4:44424369-44424388 | Msa1156180:intron | 40.0% | |
!!! | ATATTTTTGGGAAGCGGAAG+TGG | - | chr7_4:44424470-44424489 | Msa1156180:intron | 40.0% |
TAGGGAATAGAATGAGTTGC+TGG | + | chr7_4:44425018-44425037 | None:intergenic | 40.0% | |
! | ATAAGCTCAAAGGCACAACA+AGG | + | chr7_4:44425207-44425226 | None:intergenic | 40.0% |
TGTGGTGTGAATTTCACATG+TGG | - | chr7_4:44425428-44425447 | Msa1156180:intron | 40.0% | |
GTGGTGTGAATTTCACATGT+GGG | - | chr7_4:44425429-44425448 | Msa1156180:intron | 40.0% | |
TGGTGTGAATTTCACATGTG+GGG | - | chr7_4:44425430-44425449 | Msa1156180:intron | 40.0% | |
! | AGACTTTTTGCGTCTGTGAT+TGG | + | chr7_4:44425950-44425969 | None:intergenic | 40.0% |
! | GGTTGGTTGTGATTTAATGG+AGG | + | chr7_4:44426479-44426498 | None:intergenic | 40.0% |
ACATCTCATGGAGCTTACAT+TGG | + | chr7_4:44426714-44426733 | None:intergenic | 40.0% | |
!! | GTTGATGACGGTTTCAAAGA+GGG | + | chr7_4:44427316-44427335 | None:intergenic | 40.0% |
!!! | TCAACCCACCTTTTTTACCA+TGG | - | chr7_4:44427331-44427350 | Msa1156180:intron | 40.0% |
GCATACCATGGTAAAAAAGG+TGG | + | chr7_4:44427339-44427358 | None:intergenic | 40.0% | |
GAGGCATACCATGGTAAAAA+AGG | + | chr7_4:44427342-44427361 | None:intergenic | 40.0% | |
! | ATAAGGTTAGAGGCATACCA+TGG | + | chr7_4:44427351-44427370 | None:intergenic | 40.0% |
GGTATGCCTCTAACCTTATT+AGG | - | chr7_4:44427352-44427371 | Msa1156180:intron | 40.0% | |
ACTCTTGCATCCAATGTAGA+AGG | + | chr7_4:44427451-44427470 | None:intergenic | 40.0% | |
TTCTACATTGGATGCAAGAG+TGG | - | chr7_4:44427450-44427469 | Msa1156180:intron | 40.0% | |
! | TGGTGTCAATCTCATTTGTG+GGG | - | chr7_4:44427538-44427557 | Msa1156180:intron | 40.0% |
! | ATATGTGGGAGTGCAGATAA+AGG | - | chr7_4:44427893-44427912 | Msa1156180:intron | 40.0% |
! | TTGGCTAATTTGCACCTTAC+AGG | - | chr7_4:44428437-44428456 | Msa1156180:intron | 40.0% |
AGGATAATAAGTGGGGTTTC+CGG | - | chr7_4:44429597-44429616 | Msa1156180:intron | 40.0% | |
CAAGTGCCATACACGAAAAA+AGG | + | chr7_4:44429819-44429838 | None:intergenic | 40.0% | |
!! | GAAGCATTTTCCGCCATTTG+CGG | + | chr7_4:44417317-44417336 | None:intergenic | 45.0% |
AGACATAGGACCAAGCAAGT+TGG | - | chr7_4:44417836-44417855 | Msa1156180:intron | 45.0% | |
TCAGACTGGAAAAGTAGCGA+AGG | - | chr7_4:44417992-44418011 | Msa1156180:intron | 45.0% | |
AAAAGTAGCGAAGGCAAAGC+CGG | - | chr7_4:44418001-44418020 | Msa1156180:intron | 45.0% | |
GCTGGAGATCCAGATGATAA+AGG | - | chr7_4:44418052-44418071 | Msa1156180:intron | 45.0% | |
! | ATACGGTGGGGAGTACAAAA+TGG | - | chr7_4:44418284-44418303 | Msa1156180:intron | 45.0% |
! | TGCAGAGATCGCAAAGTGTT+TGG | + | chr7_4:44418392-44418411 | None:intergenic | 45.0% |
CTGTTCTTGTTGCTGAACTC+TGG | + | chr7_4:44418421-44418440 | None:intergenic | 45.0% | |
CAAGAGATTGAATGTGGTGG+AGG | - | chr7_4:44418475-44418494 | Msa1156180:intron | 45.0% | |
! | GCTTGACCCTTGTTGTAACA+TGG | - | chr7_4:44418796-44418815 | Msa1156180:intron | 45.0% |
ACTTGTCAGTTTCACACTGC+AGG | + | chr7_4:44419022-44419041 | None:intergenic | 45.0% | |
CCAATCTGTATACAGGCTTC+CGG | + | chr7_4:44419120-44419139 | None:intergenic | 45.0% | |
CGGAAGCCTGTATACAGATT+GGG | - | chr7_4:44419118-44419137 | Msa1156180:intron | 45.0% | |
!!! | CGACACTCATTTTGAAACGG+AGG | + | chr7_4:44419963-44419982 | None:intergenic | 45.0% |
!!! | CGACACTCATTTTGAAACGG+AGG | - | chr7_4:44419963-44419982 | Msa1156180:intron | 45.0% |
CCTCAGGTTTGACAGCATTA+GGG | + | chr7_4:44420107-44420126 | None:intergenic | 45.0% | |
ACCTCAGGTTTGACAGCATT+AGG | + | chr7_4:44420108-44420127 | None:intergenic | 45.0% | |
TCCTGATCCAAAGGCTAAAG+AGG | - | chr7_4:44420256-44420275 | Msa1156180:intron | 45.0% | |
! | ACCTCTTTAGCCTTTGGATC+AGG | + | chr7_4:44420260-44420279 | None:intergenic | 45.0% |
GGTCCTTTGTATGCTGGATT+TGG | + | chr7_4:44420470-44420489 | None:intergenic | 45.0% | |
ATCCAGCATACAAAGGACCA+TGG | - | chr7_4:44420471-44420490 | Msa1156180:intron | 45.0% | |
TTCCATGGTCCTTTGTATGC+TGG | + | chr7_4:44420476-44420495 | None:intergenic | 45.0% | |
CAAAGGACCATGGAAACGAA+AGG | - | chr7_4:44420481-44420500 | Msa1156180:intron | 45.0% | |
!! | ATTTTGGCCCAGGTTAAAGG+CGG | - | chr7_4:44420973-44420992 | Msa1156180:intron | 45.0% |
TACTGAACCGCCTTTAACCT+GGG | + | chr7_4:44420983-44421002 | None:intergenic | 45.0% | |
ATACTGAACCGCCTTTAACC+TGG | + | chr7_4:44420984-44421003 | None:intergenic | 45.0% | |
! | TGAAGTGTTTGCCAACAGAG+AGG | - | chr7_4:44421056-44421075 | Msa1156180:intron | 45.0% |
TTCATGTACCTCCTCCTCTT+GGG | + | chr7_4:44421457-44421476 | None:intergenic | 45.0% | |
GCTCAAAGAGCAAGAGAAGA+CGG | - | chr7_4:44421564-44421583 | Msa1156180:intron | 45.0% | |
ATGTGCAGGATGAACTCTGA+TGG | - | chr7_4:44422417-44422436 | Msa1156180:intron | 45.0% | |
CTTGGCGGCTAATATTCTTG+GGG | + | chr7_4:44422873-44422892 | None:intergenic | 45.0% | |
GTCTTGGCGGCTAATATTCT+TGG | + | chr7_4:44422875-44422894 | None:intergenic | 45.0% | |
! | TGTTTGAAATTGTTCGGGGG+TGG | - | chr7_4:44422898-44422917 | Msa1156180:intron | 45.0% |
! | GTTTGAAATTGTTCGGGGGT+GGG | - | chr7_4:44422899-44422918 | Msa1156180:intron | 45.0% |
TAGATGATTCCTCAGAGGCT+AGG | - | chr7_4:44422936-44422955 | Msa1156180:intron | 45.0% | |
GGAAGATCATGCCTTCAATG+TGG | - | chr7_4:44423037-44423056 | Msa1156180:intron | 45.0% | |
GTACTCAGTTCCCACATTGA+AGG | + | chr7_4:44423051-44423070 | None:intergenic | 45.0% | |
CAGCCGTTATTCTGCAACAA+TGG | - | chr7_4:44423077-44423096 | Msa1156180:intron | 45.0% | |
CAGACCAGCAATGTTGACAA+GGG | - | chr7_4:44423182-44423201 | Msa1156180:intron | 45.0% | |
AGCCAATATCCCTGTTACTG+TGG | - | chr7_4:44423331-44423350 | Msa1156180:intron | 45.0% | |
GCAACACTCTAAGTCTAGCT+TGG | - | chr7_4:44423372-44423391 | Msa1156180:intron | 45.0% | |
! | CTCTAAGTCTAGCTTGGCTA+AGG | - | chr7_4:44423378-44423397 | Msa1156180:intron | 45.0% |
CCTCTCTATCCAACCACTAA+TGG | + | chr7_4:44423680-44423699 | None:intergenic | 45.0% | |
CCATTAGTGGTTGGATAGAG+AGG | - | chr7_4:44423677-44423696 | Msa1156180:intron | 45.0% | |
!! | ACACTTGCTATGGCACAAAC+AGG | + | chr7_4:44423783-44423802 | None:intergenic | 45.0% |
GTGTCAATTCACACAAGCGT+TGG | - | chr7_4:44424208-44424227 | Msa1156180:intron | 45.0% | |
TCTGTAGGAGTGGGACTTAT+GGG | + | chr7_4:44424238-44424257 | None:intergenic | 45.0% | |
TTCTGTAGGAGTGGGACTTA+TGG | + | chr7_4:44424239-44424258 | None:intergenic | 45.0% | |
! | GATGGTGCCAGTTTCATAGA+TGG | + | chr7_4:44425173-44425192 | None:intergenic | 45.0% |
! | AGTAGTGAGTGTTTTGTCCG+TGG | + | chr7_4:44425829-44425848 | None:intergenic | 45.0% |
TTGCGTCTGTGATTGGAGAA+GGG | + | chr7_4:44425943-44425962 | None:intergenic | 45.0% | |
TTTGCGTCTGTGATTGGAGA+AGG | + | chr7_4:44425944-44425963 | None:intergenic | 45.0% | |
CGGCCCATACTCTAATAATG+GGG | + | chr7_4:44426895-44426914 | None:intergenic | 45.0% | |
CCGGCCCATACTCTAATAAT+GGG | + | chr7_4:44426896-44426915 | None:intergenic | 45.0% | |
CCCATTATTAGAGTATGGGC+CGG | - | chr7_4:44426893-44426912 | Msa1156180:intron | 45.0% | |
TCCGGCCCATACTCTAATAA+TGG | + | chr7_4:44426897-44426916 | None:intergenic | 45.0% | |
ATTAGAGTATGGGCCGGAAA+AGG | - | chr7_4:44426899-44426918 | Msa1156180:CDS | 45.0% | |
!! | GGTTGATGACGGTTTCAAAG+AGG | + | chr7_4:44427317-44427336 | None:intergenic | 45.0% |
CTTTGGTAGGGAACAAACCA+TGG | - | chr7_4:44427730-44427749 | Msa1156180:intron | 45.0% | |
GCTGTATATTCCGAGTGGTT+GGG | + | chr7_4:44428820-44428839 | None:intergenic | 45.0% | |
TGCTGTATATTCCGAGTGGT+TGG | + | chr7_4:44428821-44428840 | None:intergenic | 45.0% | |
ACACTGCTGTATATTCCGAG+TGG | + | chr7_4:44428825-44428844 | None:intergenic | 45.0% | |
TATAGAGGAGGTAGCTCAGA+TGG | + | chr7_4:44429075-44429094 | None:intergenic | 45.0% | |
GGATAATAAGTGGGGTTTCC+GGG | - | chr7_4:44429598-44429617 | Msa1156180:intron | 45.0% | |
TCCAGTTGAGCTATAAGCCA+TGG | - | chr7_4:44429661-44429680 | Msa1156180:intron | 45.0% | |
CCAGTTGAGCTATAAGCCAT+GGG | - | chr7_4:44429662-44429681 | Msa1156180:intron | 45.0% | |
!!! | TGAAAAAATTTAAAATAATA+CGG | + | chr7_4:44426151-44426170 | None:intergenic | 5.0% |
!!! | TTTCTTTATTTTTTTAATAA+AGG | + | chr7_4:44426996-44427015 | None:intergenic | 5.0% |
AAGATGGATGGCGAAGTCGT+TGG | - | chr7_4:44417963-44417982 | Msa1156180:intron | 50.0% | |
AGATGGATGGCGAAGTCGTT+GGG | - | chr7_4:44417964-44417983 | Msa1156180:intron | 50.0% | |
GTCGTTGGGTAAGATCAGAC+TGG | - | chr7_4:44417978-44417997 | Msa1156180:intron | 50.0% | |
GGTTACATGAAGCTCCTCTC+TGG | - | chr7_4:44418496-44418515 | Msa1156180:intron | 50.0% | |
TTGGTGGGGATACGCCATAT+AGG | - | chr7_4:44418539-44418558 | Msa1156180:intron | 50.0% | |
ACTGCAGGTCCTTCTTTACC+GGG | + | chr7_4:44419007-44419026 | None:intergenic | 50.0% | |
CACTGCAGGTCCTTCTTTAC+CGG | + | chr7_4:44419008-44419027 | None:intergenic | 50.0% | |
CCGGAAGCCTGTATACAGAT+TGG | - | chr7_4:44419117-44419136 | Msa1156180:intron | 50.0% | |
TTCTCTGTCGTCCCAATCTG+CGG | + | chr7_4:44420073-44420092 | None:intergenic | 50.0% | |
CCCTAATGCTGTCAAACCTG+AGG | - | chr7_4:44420104-44420123 | Msa1156180:intron | 50.0% | |
TGTCGGCATAGAAGTTTGGC+AGG | - | chr7_4:44420820-44420839 | Msa1156180:intron | 50.0% | |
TGCCGAGCTATTAGGCTGAA+TGG | - | chr7_4:44420920-44420939 | Msa1156180:intron | 50.0% | |
AAGAAAAGCCCAAGAGGAGG+AGG | - | chr7_4:44421446-44421465 | Msa1156180:intron | 50.0% | |
GTTCATGTACCTCCTCCTCT+TGG | + | chr7_4:44421458-44421477 | None:intergenic | 50.0% | |
GAGCAAGAGAAGACGGTGAA+AGG | - | chr7_4:44421571-44421590 | Msa1156180:intron | 50.0% | |
CAAGAGAAGACGGTGAAAGG+CGG | - | chr7_4:44421574-44421593 | Msa1156180:intron | 50.0% | |
GAAAGGCGGAGAAAAGAGAG+AGG | - | chr7_4:44421588-44421607 | Msa1156180:intron | 50.0% | |
!! | GGAGGGAAAGCACTTGTAAG+TGG | + | chr7_4:44421963-44421982 | None:intergenic | 50.0% |
CCTTGTCAACATTGCTGGTC+TGG | + | chr7_4:44423184-44423203 | None:intergenic | 50.0% | |
CCAGACCAGCAATGTTGACA+AGG | - | chr7_4:44423181-44423200 | Msa1156180:intron | 50.0% | |
CTTGCCCTTGTCAACATTGC+TGG | + | chr7_4:44423189-44423208 | None:intergenic | 50.0% | |
CAGCAATGTTGACAAGGGCA+AGG | - | chr7_4:44423187-44423206 | Msa1156180:intron | 50.0% | |
! | TCTAGCTTGGCTAAGGACAC+AGG | - | chr7_4:44423385-44423404 | Msa1156180:intron | 50.0% |
ACGAAATTCTAGCCCGTGCT+TGG | + | chr7_4:44424012-44424031 | None:intergenic | 50.0% | |
TGTAGGAGTGGGACTTATGG+GGG | + | chr7_4:44424236-44424255 | None:intergenic | 50.0% | |
CTGTAGGAGTGGGACTTATG+GGG | + | chr7_4:44424237-44424256 | None:intergenic | 50.0% | |
ATGTCGTAAACCACATCGGG+CGG | - | chr7_4:44424372-44424391 | Msa1156180:intron | 50.0% | |
GTATCTGCTATCCACCACCA+CGG | + | chr7_4:44424497-44424516 | None:intergenic | 50.0% | |
CCCATGGCTTATAGCTCAAC+TGG | + | chr7_4:44429665-44429684 | None:intergenic | 50.0% | |
!! | AGCCGGTTCGTTCAAGCACA+CGG | - | chr7_4:44418018-44418037 | Msa1156180:intron | 55.0% |
AGCCGTGTGCTTGAACGAAC+CGG | + | chr7_4:44418023-44418042 | None:intergenic | 55.0% | |
GTTCGTTCAAGCACACGGCT+GGG | - | chr7_4:44418023-44418042 | Msa1156180:intron | 55.0% | |
TCAAGCACACGGCTGGGAAA+TGG | - | chr7_4:44418029-44418048 | Msa1156180:intron | 55.0% | |
CAAGCACACGGCTGGGAAAT+GGG | - | chr7_4:44418030-44418049 | Msa1156180:intron | 55.0% | |
! | CAATCTGCGGGCTGCGAATA+GGG | + | chr7_4:44420060-44420079 | None:intergenic | 55.0% |
CTATTCGCAGCCCGCAGATT+GGG | - | chr7_4:44420059-44420078 | Msa1156180:intron | 55.0% | |
TCTCTGTCGTCCCAATCTGC+GGG | + | chr7_4:44420072-44420091 | None:intergenic | 55.0% | |
CTACGACGTGCCGAGCTATT+AGG | - | chr7_4:44420912-44420931 | Msa1156180:intron | 55.0% | |
TCCTCAGAGGCTAGGCCATT+TGG | - | chr7_4:44422944-44422963 | Msa1156180:intron | 55.0% | |
ACCAAATGGCCTAGCCTCTG+AGG | + | chr7_4:44422948-44422967 | None:intergenic | 55.0% | |
ATAGACACCCGTGCCAAGCA+CGG | - | chr7_4:44423996-44424015 | Msa1156180:intron | 55.0% | |
ATTCTAGCCCGTGCTTGGCA+CGG | + | chr7_4:44424007-44424026 | None:intergenic | 55.0% | |
GGTTCGTTCAAGCACACGGC+TGG | - | chr7_4:44418022-44418041 | Msa1156180:intron | 60.0% | |
! | CCAATCTGCGGGCTGCGAAT+AGG | + | chr7_4:44420061-44420080 | None:intergenic | 60.0% |
CCTATTCGCAGCCCGCAGAT+TGG | - | chr7_4:44420058-44420077 | Msa1156180:intron | 60.0% | |
CGGCGATGCTGCACATAGGA+GGG | + | chr7_4:44421980-44421999 | None:intergenic | 60.0% | |
ATCGCGGCGATGCTGCACAT+AGG | + | chr7_4:44421984-44422003 | None:intergenic | 60.0% | |
GCAGCATCGCCGCGATTACA+TGG | - | chr7_4:44421988-44422007 | Msa1156180:intron | 60.0% | |
GGTGTCCGAGCTCAACCACT+CGG | - | chr7_4:44422309-44422328 | Msa1156180:intron | 60.0% | |
GTGTCCGAGCTCAACCACTC+GGG | - | chr7_4:44422310-44422329 | Msa1156180:intron | 60.0% | |
GTAGCCCGAGTGGTTGAGCT+CGG | + | chr7_4:44422317-44422336 | None:intergenic | 60.0% | |
ACCACTCGGGCTACGTCTAG+AGG | - | chr7_4:44422323-44422342 | Msa1156180:intron | 60.0% | |
TCCTCTAGACGTAGCCCGAG+TGG | + | chr7_4:44422327-44422346 | None:intergenic | 60.0% | |
TAGACACCCGTGCCAAGCAC+GGG | - | chr7_4:44423997-44424016 | Msa1156180:intron | 60.0% | |
TTCTAGCCCGTGCTTGGCAC+GGG | + | chr7_4:44424006-44424025 | None:intergenic | 60.0% | |
AGGGGTCGGAGTTCGAATCC+CGG | + | chr7_4:44429619-44429638 | None:intergenic | 60.0% | |
CACACGGCTGGGAAATGGGC+TGG | - | chr7_4:44418034-44418053 | Msa1156180:intron | 65.0% | |
GCGGCGATGCTGCACATAGG+AGG | + | chr7_4:44421981-44422000 | None:intergenic | 65.0% | |
CAGTGACTGTCCGCCCGATG+TGG | + | chr7_4:44424385-44424404 | None:intergenic | 65.0% | |
TGGGAAGCGGAAGTGGTCCG+TGG | - | chr7_4:44424477-44424496 | Msa1156180:intron | 65.0% | |
GAAGCGGAAGTGGTCCGTGG+TGG | - | chr7_4:44424480-44424499 | Msa1156180:intron | 65.0% | |
GCGGAAGTGGTCCGTGGTGG+TGG | - | chr7_4:44424483-44424502 | Msa1156180:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_4 | gene | 44417274 | 44429901 | 44417274 | ID=Msa1156180;Name=Msa1156180 |
chr7_4 | mRNA | 44417274 | 44429901 | 44417274 | ID=Msa1156180-mRNA-1;Parent=Msa1156180;Name=Msa1156180-mRNA-1;_AED=0.22;_eAED=0.22;_QI=46|0.78|0.73|0.86|0.85|0.93|15|0|403 |
chr7_4 | exon | 44417274 | 44417285 | 44417274 | ID=Msa1156180-mRNA-1:exon:11403;Parent=Msa1156180-mRNA-1 |
chr7_4 | exon | 44418382 | 44418387 | 44418382 | ID=Msa1156180-mRNA-1:exon:11402;Parent=Msa1156180-mRNA-1 |
chr7_4 | exon | 44425522 | 44425614 | 44425522 | ID=Msa1156180-mRNA-1:exon:11401;Parent=Msa1156180-mRNA-1 |
chr7_4 | exon | 44425708 | 44425764 | 44425708 | ID=Msa1156180-mRNA-1:exon:11400;Parent=Msa1156180-mRNA-1 |
chr7_4 | exon | 44426098 | 44426190 | 44426098 | ID=Msa1156180-mRNA-1:exon:11399;Parent=Msa1156180-mRNA-1 |
chr7_4 | exon | 44426334 | 44426401 | 44426334 | ID=Msa1156180-mRNA-1:exon:11398;Parent=Msa1156180-mRNA-1 |
chr7_4 | exon | 44426506 | 44426563 | 44426506 | ID=Msa1156180-mRNA-1:exon:11397;Parent=Msa1156180-mRNA-1 |
chr7_4 | exon | 44426673 | 44426759 | 44426673 | ID=Msa1156180-mRNA-1:exon:11396;Parent=Msa1156180-mRNA-1 |
chr7_4 | exon | 44426898 | 44426945 | 44426898 | ID=Msa1156180-mRNA-1:exon:11395;Parent=Msa1156180-mRNA-1 |
chr7_4 | exon | 44427050 | 44427106 | 44427050 | ID=Msa1156180-mRNA-1:exon:11394;Parent=Msa1156180-mRNA-1 |
chr7_4 | exon | 44427991 | 44428105 | 44427991 | ID=Msa1156180-mRNA-1:exon:11393;Parent=Msa1156180-mRNA-1 |
chr7_4 | exon | 44428136 | 44428249 | 44428136 | ID=Msa1156180-mRNA-1:exon:11392;Parent=Msa1156180-mRNA-1 |
chr7_4 | exon | 44428615 | 44428807 | 44428615 | ID=Msa1156180-mRNA-1:exon:11391;Parent=Msa1156180-mRNA-1 |
chr7_4 | exon | 44429102 | 44429209 | 44429102 | ID=Msa1156180-mRNA-1:exon:11390;Parent=Msa1156180-mRNA-1 |
chr7_4 | exon | 44429753 | 44429901 | 44429753 | ID=Msa1156180-mRNA-1:exon:11389;Parent=Msa1156180-mRNA-1 |
chr7_4 | five_prime_UTR | 44429856 | 44429901 | 44429856 | ID=Msa1156180-mRNA-1:five_prime_utr;Parent=Msa1156180-mRNA-1 |
chr7_4 | CDS | 44429753 | 44429855 | 44429753 | ID=Msa1156180-mRNA-1:cds;Parent=Msa1156180-mRNA-1 |
chr7_4 | CDS | 44429102 | 44429209 | 44429102 | ID=Msa1156180-mRNA-1:cds;Parent=Msa1156180-mRNA-1 |
chr7_4 | CDS | 44428615 | 44428807 | 44428615 | ID=Msa1156180-mRNA-1:cds;Parent=Msa1156180-mRNA-1 |
chr7_4 | CDS | 44428136 | 44428249 | 44428136 | ID=Msa1156180-mRNA-1:cds;Parent=Msa1156180-mRNA-1 |
chr7_4 | CDS | 44427991 | 44428105 | 44427991 | ID=Msa1156180-mRNA-1:cds;Parent=Msa1156180-mRNA-1 |
chr7_4 | CDS | 44427050 | 44427106 | 44427050 | ID=Msa1156180-mRNA-1:cds;Parent=Msa1156180-mRNA-1 |
chr7_4 | CDS | 44426898 | 44426945 | 44426898 | ID=Msa1156180-mRNA-1:cds;Parent=Msa1156180-mRNA-1 |
chr7_4 | CDS | 44426673 | 44426759 | 44426673 | ID=Msa1156180-mRNA-1:cds;Parent=Msa1156180-mRNA-1 |
chr7_4 | CDS | 44426506 | 44426563 | 44426506 | ID=Msa1156180-mRNA-1:cds;Parent=Msa1156180-mRNA-1 |
chr7_4 | CDS | 44426334 | 44426401 | 44426334 | ID=Msa1156180-mRNA-1:cds;Parent=Msa1156180-mRNA-1 |
chr7_4 | CDS | 44426098 | 44426190 | 44426098 | ID=Msa1156180-mRNA-1:cds;Parent=Msa1156180-mRNA-1 |
chr7_4 | CDS | 44425708 | 44425764 | 44425708 | ID=Msa1156180-mRNA-1:cds;Parent=Msa1156180-mRNA-1 |
chr7_4 | CDS | 44425522 | 44425614 | 44425522 | ID=Msa1156180-mRNA-1:cds;Parent=Msa1156180-mRNA-1 |
chr7_4 | CDS | 44418382 | 44418387 | 44418382 | ID=Msa1156180-mRNA-1:cds;Parent=Msa1156180-mRNA-1 |
chr7_4 | CDS | 44417274 | 44417285 | 44417274 | ID=Msa1156180-mRNA-1:cds;Parent=Msa1156180-mRNA-1 |
Gene Sequence |
Protein sequence |