Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0473850 | XP_003602603.1 | 92.778 | 360 | 23 | 1 | 1 | 360 | 1 | 357 | 0.0 | 691 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0473850 | sp|Q9FY82|NAC82_ARATH | 47.866 | 328 | 135 | 9 | 1 | 305 | 1 | 315 | 4.17e-90 | 281 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0473850 | G7JBJ4 | 92.778 | 360 | 23 | 1 | 1 | 360 | 1 | 357 | 0.0 | 691 |
Gene ID | Type | Classification |
---|---|---|
Msa0473850 | TF | NAC |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0377860 | Msa0473850 | 0.952535 | 1.965444e-110 | -8.615850e-47 |
Msa0377930 | Msa0473850 | 0.956561 | 2.204241e-114 | -8.615850e-47 |
Msa0473850 | Msa0518090 | 0.970870 | 2.804368e-132 | -8.615850e-47 |
Msa0473850 | Msa1313050 | -0.804226 | 2.391111e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0473850 | MtrunA17_Chr3g0130101 | 92.778 | 360 | 23 | 1 | 1 | 360 | 1 | 357 | 0.0 | 691 |
Msa0473850 | MtrunA17_Chr8g0364791 | 65.106 | 235 | 76 | 3 | 1 | 235 | 1 | 229 | 2.25e-106 | 319 |
Msa0473850 | MtrunA17_Chr8g0384201 | 64.255 | 235 | 78 | 3 | 1 | 235 | 1 | 229 | 8.79e-106 | 319 |
Msa0473850 | MtrunA17_Chr3g0092671 | 57.143 | 175 | 73 | 2 | 9 | 182 | 7 | 180 | 1.60e-68 | 224 |
Msa0473850 | MtrunA17_Chr1g0201021 | 50.754 | 199 | 93 | 1 | 1 | 194 | 13 | 211 | 4.42e-68 | 224 |
Msa0473850 | MtrunA17_Chr1g0197361 | 54.872 | 195 | 80 | 4 | 9 | 201 | 10 | 198 | 8.14e-68 | 223 |
Msa0473850 | MtrunA17_Chr1g0197351 | 56.742 | 178 | 70 | 2 | 7 | 178 | 42 | 218 | 2.72e-63 | 209 |
Msa0473850 | MtrunA17_Chr6g0481091 | 57.616 | 151 | 64 | 0 | 9 | 159 | 8 | 158 | 8.17e-61 | 195 |
Msa0473850 | MtrunA17_Chr3g0109821 | 55.215 | 163 | 69 | 3 | 9 | 168 | 8 | 169 | 7.67e-57 | 196 |
Msa0473850 | MtrunA17_Chr5g0433781 | 53.704 | 162 | 74 | 1 | 9 | 169 | 8 | 169 | 8.01e-57 | 195 |
Msa0473850 | MtrunA17_Chr2g0309891 | 55.333 | 150 | 66 | 1 | 9 | 157 | 8 | 157 | 4.30e-56 | 186 |
Msa0473850 | MtrunA17_Chr4g0060931 | 51.592 | 157 | 72 | 2 | 9 | 163 | 19 | 173 | 1.48e-50 | 172 |
Msa0473850 | MtrunA17_Chr5g0428991 | 39.453 | 256 | 144 | 5 | 10 | 259 | 28 | 278 | 2.77e-50 | 177 |
Msa0473850 | MtrunA17_Chr4g0018391 | 51.656 | 151 | 68 | 3 | 9 | 157 | 9 | 156 | 4.62e-50 | 171 |
Msa0473850 | MtrunA17_Chr3g0128151 | 43.961 | 207 | 96 | 3 | 10 | 209 | 25 | 218 | 6.21e-50 | 176 |
Msa0473850 | MtrunA17_Chr2g0309331 | 51.974 | 152 | 69 | 3 | 9 | 158 | 12 | 161 | 1.31e-49 | 169 |
Msa0473850 | MtrunA17_Chr1g0200561 | 49.686 | 159 | 75 | 3 | 9 | 165 | 21 | 176 | 1.64e-49 | 169 |
Msa0473850 | MtrunA17_Chr3g0091921 | 51.250 | 160 | 74 | 2 | 6 | 163 | 15 | 172 | 2.09e-49 | 168 |
Msa0473850 | MtrunA17_Chr8g0372121 | 41.346 | 208 | 109 | 5 | 9 | 214 | 8 | 204 | 4.03e-49 | 167 |
Msa0473850 | MtrunA17_Chr3g0124761 | 49.383 | 162 | 76 | 3 | 1 | 159 | 1 | 159 | 4.91e-49 | 166 |
Msa0473850 | MtrunA17_Chr5g0400461 | 46.286 | 175 | 84 | 2 | 9 | 176 | 8 | 179 | 5.58e-49 | 167 |
Msa0473850 | MtrunA17_Chr2g0316971 | 53.165 | 158 | 66 | 4 | 9 | 161 | 25 | 179 | 2.50e-48 | 167 |
Msa0473850 | MtrunA17_Chr4g0054791 | 39.474 | 228 | 114 | 4 | 9 | 212 | 8 | 235 | 3.02e-48 | 165 |
Msa0473850 | MtrunA17_Chr3g0128111 | 48.000 | 150 | 78 | 0 | 8 | 157 | 43 | 192 | 4.89e-48 | 162 |
Msa0473850 | MtrunA17_Chr5g0405211 | 49.669 | 151 | 71 | 3 | 9 | 157 | 10 | 157 | 4.95e-48 | 166 |
Msa0473850 | MtrunA17_Chr6g0484441 | 51.678 | 149 | 68 | 2 | 9 | 157 | 7 | 151 | 8.24e-48 | 164 |
Msa0473850 | MtrunA17_Chr4g0017921 | 50.331 | 151 | 71 | 2 | 9 | 158 | 10 | 157 | 9.57e-48 | 165 |
Msa0473850 | MtrunA17_Chr2g0318081 | 47.651 | 149 | 76 | 1 | 9 | 157 | 18 | 164 | 1.18e-47 | 165 |
Msa0473850 | MtrunA17_Chr4g0056541 | 50.993 | 151 | 69 | 3 | 9 | 157 | 9 | 156 | 1.56e-47 | 164 |
Msa0473850 | MtrunA17_Chr7g0252971 | 45.062 | 162 | 74 | 3 | 9 | 157 | 10 | 169 | 4.52e-47 | 163 |
Msa0473850 | MtrunA17_Chr7g0253011 | 51.282 | 156 | 66 | 4 | 9 | 157 | 19 | 171 | 5.82e-47 | 164 |
Msa0473850 | MtrunA17_Chr6g0453451 | 46.154 | 169 | 83 | 3 | 9 | 173 | 22 | 186 | 1.41e-46 | 161 |
Msa0473850 | MtrunA17_Chr8g0361731 | 45.732 | 164 | 76 | 4 | 5 | 157 | 12 | 173 | 1.47e-45 | 160 |
Msa0473850 | MtrunA17_Chr7g0263931 | 32.955 | 264 | 142 | 6 | 9 | 266 | 13 | 247 | 2.05e-45 | 158 |
Msa0473850 | MtrunA17_Chr3g0139331 | 48.408 | 157 | 75 | 3 | 9 | 163 | 13 | 165 | 3.93e-45 | 158 |
Msa0473850 | MtrunA17_Chr6g0453131 | 45.963 | 161 | 75 | 4 | 7 | 157 | 15 | 173 | 6.42e-45 | 158 |
Msa0473850 | MtrunA17_Chr5g0417791 | 47.403 | 154 | 75 | 2 | 9 | 158 | 5 | 156 | 1.79e-44 | 154 |
Msa0473850 | MtrunA17_Chr2g0318101 | 45.062 | 162 | 74 | 4 | 9 | 157 | 17 | 176 | 3.27e-44 | 155 |
Msa0473850 | MtrunA17_Chr4g0076731 | 45.570 | 158 | 81 | 3 | 3 | 159 | 50 | 203 | 4.50e-44 | 157 |
Msa0473850 | MtrunA17_Chr5g0398971 | 46.405 | 153 | 75 | 5 | 9 | 157 | 9 | 158 | 7.27e-44 | 154 |
Msa0473850 | MtrunA17_Chr7g0217721 | 43.503 | 177 | 82 | 4 | 10 | 170 | 22 | 196 | 9.51e-44 | 154 |
Msa0473850 | MtrunA17_Chr4g0042561 | 44.586 | 157 | 81 | 3 | 9 | 161 | 11 | 165 | 1.43e-43 | 152 |
Msa0473850 | MtrunA17_Chr5g0417001 | 44.172 | 163 | 79 | 4 | 5 | 157 | 12 | 172 | 2.31e-43 | 154 |
Msa0473850 | MtrunA17_Chr8g0359921 | 47.020 | 151 | 76 | 2 | 9 | 157 | 16 | 164 | 2.76e-43 | 152 |
Msa0473850 | MtrunA17_Chr7g0214071 | 47.561 | 164 | 71 | 5 | 9 | 167 | 17 | 170 | 4.08e-43 | 150 |
Msa0473850 | MtrunA17_Chr4g0047841 | 43.182 | 176 | 73 | 4 | 7 | 157 | 15 | 188 | 7.03e-43 | 152 |
Msa0473850 | MtrunA17_Chr2g0326361 | 47.097 | 155 | 74 | 4 | 9 | 157 | 16 | 168 | 7.36e-43 | 151 |
Msa0473850 | MtrunA17_Chr4g0038751 | 45.000 | 160 | 78 | 4 | 1 | 157 | 9 | 161 | 1.36e-42 | 150 |
Msa0473850 | MtrunA17_Chr8g0384721 | 45.806 | 155 | 77 | 3 | 9 | 159 | 9 | 160 | 1.83e-42 | 149 |
Msa0473850 | MtrunA17_Chr6g0461661 | 46.405 | 153 | 74 | 4 | 10 | 157 | 21 | 170 | 3.24e-42 | 151 |
Msa0473850 | MtrunA17_Chr8g0346001 | 43.125 | 160 | 81 | 2 | 9 | 158 | 17 | 176 | 3.25e-42 | 152 |
Msa0473850 | MtrunA17_Chr1g0147421 | 48.052 | 154 | 73 | 4 | 9 | 159 | 29 | 178 | 9.73e-42 | 149 |
Msa0473850 | MtrunA17_Chr3g0130731 | 46.104 | 154 | 77 | 3 | 9 | 159 | 9 | 159 | 1.58e-41 | 147 |
Msa0473850 | MtrunA17_Chr2g0312321 | 47.531 | 162 | 71 | 5 | 1 | 157 | 6 | 158 | 2.23e-41 | 147 |
Msa0473850 | MtrunA17_Chr7g0217711 | 48.889 | 135 | 67 | 1 | 10 | 144 | 22 | 154 | 6.89e-40 | 139 |
Msa0473850 | MtrunA17_Chr1g0183741 | 45.033 | 151 | 75 | 3 | 9 | 157 | 12 | 156 | 1.62e-39 | 141 |
Msa0473850 | MtrunA17_Chr7g0261411 | 44.667 | 150 | 75 | 3 | 9 | 156 | 12 | 155 | 8.73e-38 | 137 |
Msa0473850 | MtrunA17_Chr5g0442771 | 40.719 | 167 | 85 | 3 | 3 | 157 | 14 | 178 | 1.32e-37 | 137 |
Msa0473850 | MtrunA17_Chr8g0345671 | 47.297 | 148 | 69 | 5 | 10 | 154 | 14 | 155 | 1.78e-37 | 139 |
Msa0473850 | MtrunA17_Chr2g0311651 | 41.212 | 165 | 81 | 3 | 8 | 157 | 23 | 186 | 3.27e-37 | 136 |
Msa0473850 | MtrunA17_Chr2g0321741 | 46.875 | 128 | 60 | 2 | 27 | 154 | 12 | 131 | 4.50e-37 | 137 |
Msa0473850 | MtrunA17_Chr8g0385991 | 41.071 | 168 | 84 | 4 | 9 | 169 | 16 | 175 | 6.79e-37 | 133 |
Msa0473850 | MtrunA17_Chr8g0345691 | 43.624 | 149 | 75 | 5 | 10 | 155 | 15 | 157 | 7.75e-36 | 135 |
Msa0473850 | MtrunA17_Chr3g0144271 | 44.295 | 149 | 71 | 5 | 9 | 154 | 25 | 164 | 1.13e-35 | 134 |
Msa0473850 | MtrunA17_Chr2g0311661 | 40.606 | 165 | 82 | 4 | 8 | 157 | 22 | 185 | 3.31e-35 | 130 |
Msa0473850 | MtrunA17_Chr3g0131911 | 40.719 | 167 | 85 | 3 | 9 | 165 | 16 | 178 | 2.81e-34 | 126 |
Msa0473850 | MtrunA17_Chr8g0345711 | 46.825 | 126 | 63 | 3 | 10 | 132 | 15 | 139 | 1.02e-33 | 122 |
Msa0473850 | MtrunA17_Chr4g0026141 | 38.217 | 157 | 90 | 5 | 6 | 155 | 4 | 160 | 3.59e-30 | 116 |
Msa0473850 | MtrunA17_Chr2g0321631 | 39.355 | 155 | 86 | 6 | 9 | 155 | 6 | 160 | 3.84e-30 | 115 |
Msa0473850 | MtrunA17_Chr8g0345741 | 42.857 | 140 | 71 | 5 | 20 | 156 | 4 | 137 | 1.20e-29 | 111 |
Msa0473850 | MtrunA17_Chr3g0113001 | 44.167 | 120 | 64 | 1 | 57 | 173 | 13 | 132 | 2.01e-29 | 115 |
Msa0473850 | MtrunA17_Chr7g0266701 | 33.036 | 224 | 127 | 9 | 7 | 211 | 4 | 223 | 3.24e-29 | 113 |
Msa0473850 | MtrunA17_Chr8g0345731 | 41.722 | 151 | 78 | 6 | 10 | 154 | 27 | 173 | 1.46e-28 | 109 |
Msa0473850 | MtrunA17_Chr8g0345721 | 38.272 | 162 | 64 | 5 | 10 | 136 | 38 | 198 | 3.70e-27 | 106 |
Msa0473850 | MtrunA17_Chr4g0050701 | 38.125 | 160 | 77 | 6 | 9 | 158 | 13 | 160 | 1.07e-26 | 104 |
Msa0473850 | MtrunA17_Chr8g0345701 | 43.243 | 148 | 63 | 6 | 3 | 132 | 2 | 146 | 1.44e-26 | 103 |
Msa0473850 | MtrunA17_Chr3g0113031 | 45.631 | 103 | 51 | 2 | 73 | 170 | 4 | 106 | 9.54e-26 | 104 |
Msa0473850 | MtrunA17_Chr8g0384351 | 36.250 | 160 | 76 | 7 | 9 | 166 | 12 | 147 | 2.70e-20 | 87.4 |
Msa0473850 | MtrunA17_Chr3g0130321 | 33.516 | 182 | 98 | 8 | 1 | 168 | 1 | 173 | 4.42e-19 | 84.7 |
Msa0473850 | MtrunA17_Chr7g0243371 | 48.750 | 80 | 39 | 1 | 57 | 134 | 12 | 91 | 4.45e-19 | 82.0 |
Msa0473850 | MtrunA17_Chr7g0251651 | 29.851 | 134 | 89 | 4 | 1 | 132 | 11 | 141 | 2.27e-14 | 70.9 |
Msa0473850 | MtrunA17_Chr7g0251661 | 29.839 | 124 | 83 | 3 | 10 | 132 | 13 | 133 | 3.51e-13 | 66.6 |
Msa0473850 | MtrunA17_Chr1g0194791 | 60.870 | 46 | 17 | 1 | 9 | 53 | 48 | 93 | 4.78e-13 | 64.7 |
Msa0473850 | MtrunA17_Chr7g0274971 | 34.194 | 155 | 84 | 10 | 13 | 157 | 11 | 157 | 1.32e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0473850 | AT5G09330.5 | 47.866 | 328 | 135 | 9 | 1 | 305 | 1 | 315 | 4.24e-91 | 281 |
Msa0473850 | AT5G09330.2 | 47.866 | 328 | 135 | 9 | 1 | 305 | 1 | 315 | 4.24e-91 | 281 |
Msa0473850 | AT5G09330.4 | 47.866 | 328 | 135 | 9 | 1 | 305 | 1 | 315 | 4.24e-91 | 281 |
Msa0473850 | AT5G09330.3 | 47.866 | 328 | 135 | 9 | 1 | 305 | 1 | 315 | 4.24e-91 | 281 |
Msa0473850 | AT5G09330.1 | 47.866 | 328 | 135 | 9 | 1 | 305 | 1 | 315 | 4.24e-91 | 281 |
Msa0473850 | AT5G64060.1 | 55.042 | 238 | 99 | 3 | 1 | 238 | 1 | 230 | 6.90e-88 | 269 |
Msa0473850 | AT5G04410.1 | 61.538 | 182 | 69 | 1 | 7 | 188 | 9 | 189 | 1.06e-78 | 252 |
Msa0473850 | AT3G10500.1 | 63.253 | 166 | 61 | 0 | 7 | 172 | 9 | 174 | 1.84e-74 | 240 |
Msa0473850 | AT1G34190.1 | 47.867 | 211 | 109 | 1 | 5 | 215 | 14 | 223 | 1.19e-67 | 223 |
Msa0473850 | AT3G10480.2 | 56.725 | 171 | 73 | 1 | 7 | 177 | 27 | 196 | 8.56e-65 | 212 |
Msa0473850 | AT3G10480.1 | 56.977 | 172 | 72 | 2 | 7 | 177 | 27 | 197 | 1.36e-64 | 212 |
Msa0473850 | AT3G10490.1 | 55.114 | 176 | 77 | 2 | 7 | 181 | 27 | 201 | 3.41e-64 | 204 |
Msa0473850 | AT3G10490.2 | 55.114 | 176 | 77 | 2 | 7 | 181 | 27 | 201 | 5.55e-63 | 207 |
Msa0473850 | AT1G34180.3 | 50.267 | 187 | 92 | 1 | 5 | 190 | 14 | 200 | 1.29e-62 | 207 |
Msa0473850 | AT1G34180.1 | 50.267 | 187 | 92 | 1 | 5 | 190 | 14 | 200 | 1.03e-61 | 207 |
Msa0473850 | AT3G17730.1 | 58.278 | 151 | 63 | 0 | 9 | 159 | 8 | 158 | 2.69e-60 | 194 |
Msa0473850 | AT1G34180.4 | 47.236 | 199 | 92 | 2 | 5 | 190 | 14 | 212 | 1.88e-59 | 199 |
Msa0473850 | AT3G10480.3 | 48.293 | 205 | 71 | 3 | 7 | 177 | 27 | 230 | 3.16e-59 | 200 |
Msa0473850 | AT1G65910.1 | 52.273 | 176 | 83 | 1 | 7 | 181 | 6 | 181 | 1.10e-58 | 201 |
Msa0473850 | AT1G34180.2 | 47.236 | 199 | 92 | 2 | 5 | 190 | 14 | 212 | 1.36e-58 | 199 |
Msa0473850 | AT1G33060.1 | 54.054 | 148 | 68 | 0 | 10 | 157 | 27 | 174 | 1.56e-54 | 189 |
Msa0473850 | AT1G33060.2 | 54.054 | 148 | 68 | 0 | 10 | 157 | 27 | 174 | 1.66e-54 | 189 |
Msa0473850 | AT3G03200.1 | 55.333 | 150 | 66 | 1 | 9 | 157 | 8 | 157 | 6.47e-54 | 184 |
Msa0473850 | AT5G24590.2 | 46.860 | 207 | 92 | 5 | 10 | 215 | 16 | 205 | 1.17e-53 | 183 |
Msa0473850 | AT5G17260.1 | 52.667 | 150 | 70 | 1 | 9 | 157 | 8 | 157 | 8.45e-53 | 182 |
Msa0473850 | AT2G27300.1 | 53.378 | 148 | 61 | 2 | 7 | 154 | 14 | 153 | 1.20e-52 | 177 |
Msa0473850 | AT3G49530.2 | 51.333 | 150 | 72 | 1 | 10 | 158 | 16 | 165 | 3.76e-51 | 176 |
Msa0473850 | AT4G35580.1 | 54.054 | 148 | 68 | 0 | 10 | 157 | 12 | 159 | 4.19e-51 | 178 |
Msa0473850 | AT1G54330.1 | 52.903 | 155 | 70 | 1 | 9 | 163 | 8 | 159 | 4.50e-51 | 172 |
Msa0473850 | AT4G35580.3 | 54.054 | 148 | 68 | 0 | 10 | 157 | 12 | 159 | 5.03e-51 | 178 |
Msa0473850 | AT4G35580.2 | 54.054 | 148 | 68 | 0 | 10 | 157 | 12 | 159 | 5.17e-51 | 178 |
Msa0473850 | AT4G17980.1 | 51.266 | 158 | 73 | 2 | 4 | 157 | 3 | 160 | 5.81e-51 | 171 |
Msa0473850 | AT5G61430.1 | 52.866 | 157 | 70 | 2 | 9 | 163 | 18 | 172 | 7.36e-51 | 173 |
Msa0473850 | AT4G17980.2 | 51.266 | 158 | 73 | 2 | 4 | 157 | 3 | 160 | 1.15e-50 | 171 |
Msa0473850 | AT3G49530.1 | 51.333 | 150 | 72 | 1 | 10 | 158 | 16 | 165 | 1.33e-50 | 176 |
Msa0473850 | AT5G22290.1 | 47.126 | 174 | 76 | 3 | 3 | 167 | 17 | 183 | 1.37e-50 | 172 |
Msa0473850 | AT5G39610.1 | 54.430 | 158 | 66 | 3 | 9 | 163 | 22 | 176 | 1.90e-50 | 170 |
Msa0473850 | AT5G46590.1 | 49.359 | 156 | 77 | 2 | 4 | 157 | 3 | 158 | 1.22e-49 | 168 |
Msa0473850 | AT1G71930.2 | 48.734 | 158 | 78 | 2 | 7 | 163 | 9 | 164 | 3.06e-49 | 168 |
Msa0473850 | AT1G71930.1 | 48.734 | 158 | 78 | 2 | 7 | 163 | 9 | 164 | 3.06e-49 | 168 |
Msa0473850 | AT4G10350.1 | 50.331 | 151 | 74 | 1 | 9 | 158 | 11 | 161 | 4.00e-49 | 169 |
Msa0473850 | AT3G44290.2 | 51.020 | 147 | 64 | 2 | 8 | 154 | 15 | 153 | 6.98e-49 | 164 |
Msa0473850 | AT5G07680.2 | 51.592 | 157 | 72 | 2 | 9 | 163 | 5 | 159 | 8.94e-49 | 167 |
Msa0473850 | AT3G18400.1 | 51.678 | 149 | 69 | 2 | 9 | 157 | 7 | 152 | 9.59e-49 | 167 |
Msa0473850 | AT1G32870.2 | 51.786 | 168 | 77 | 2 | 7 | 172 | 10 | 175 | 1.06e-48 | 172 |
Msa0473850 | AT5G07680.1 | 51.592 | 157 | 72 | 2 | 9 | 163 | 19 | 173 | 1.21e-48 | 167 |
Msa0473850 | AT1G32870.1 | 51.786 | 168 | 77 | 2 | 7 | 172 | 10 | 175 | 1.26e-48 | 172 |
Msa0473850 | AT1G12260.2 | 47.561 | 164 | 77 | 4 | 9 | 168 | 9 | 167 | 1.67e-48 | 167 |
Msa0473850 | AT1G12260.1 | 47.561 | 164 | 77 | 4 | 9 | 168 | 9 | 167 | 2.60e-48 | 168 |
Msa0473850 | AT1G32870.3 | 51.786 | 168 | 77 | 2 | 7 | 172 | 46 | 211 | 3.27e-48 | 171 |
Msa0473850 | AT3G44290.1 | 51.370 | 146 | 63 | 2 | 9 | 154 | 16 | 153 | 5.81e-48 | 165 |
Msa0473850 | AT2G18060.3 | 41.500 | 200 | 104 | 4 | 9 | 206 | 11 | 199 | 6.42e-48 | 166 |
Msa0473850 | AT2G18060.1 | 41.500 | 200 | 104 | 4 | 9 | 206 | 11 | 199 | 6.42e-48 | 166 |
Msa0473850 | AT5G18270.2 | 44.811 | 212 | 105 | 6 | 9 | 215 | 23 | 227 | 6.81e-48 | 165 |
Msa0473850 | AT5G46590.2 | 52.174 | 138 | 65 | 1 | 4 | 140 | 3 | 140 | 1.20e-47 | 163 |
Msa0473850 | AT1G01720.1 | 46.746 | 169 | 83 | 3 | 1 | 165 | 1 | 166 | 1.90e-47 | 162 |
Msa0473850 | AT5G18270.1 | 44.340 | 212 | 106 | 6 | 9 | 215 | 23 | 227 | 1.98e-47 | 164 |
Msa0473850 | AT1G33280.1 | 49.669 | 151 | 72 | 2 | 9 | 158 | 10 | 157 | 2.17e-47 | 163 |
Msa0473850 | AT2G24430.2 | 50.318 | 157 | 73 | 3 | 3 | 157 | 12 | 165 | 3.41e-47 | 163 |
Msa0473850 | AT2G24430.1 | 50.318 | 157 | 73 | 3 | 3 | 157 | 12 | 165 | 3.41e-47 | 163 |
Msa0473850 | AT1G77450.1 | 48.701 | 154 | 73 | 3 | 9 | 159 | 12 | 162 | 3.69e-47 | 160 |
Msa0473850 | AT3G29035.1 | 49.697 | 165 | 79 | 2 | 9 | 171 | 26 | 188 | 5.65e-47 | 162 |
Msa0473850 | AT1G62700.1 | 48.701 | 154 | 70 | 4 | 9 | 158 | 9 | 157 | 7.71e-47 | 164 |
Msa0473850 | AT1G62700.2 | 48.701 | 154 | 70 | 4 | 9 | 158 | 9 | 157 | 7.71e-47 | 164 |
Msa0473850 | AT4G36160.1 | 48.026 | 152 | 74 | 3 | 9 | 158 | 12 | 160 | 1.44e-46 | 163 |
Msa0473850 | AT4G36160.3 | 48.026 | 152 | 74 | 3 | 9 | 158 | 12 | 160 | 1.44e-46 | 163 |
Msa0473850 | AT4G36160.2 | 48.026 | 152 | 74 | 3 | 9 | 158 | 16 | 164 | 1.54e-46 | 163 |
Msa0473850 | AT1G69490.1 | 38.756 | 209 | 110 | 3 | 9 | 201 | 11 | 217 | 2.11e-46 | 159 |
Msa0473850 | AT4G27410.2 | 46.980 | 149 | 77 | 1 | 9 | 157 | 16 | 162 | 2.96e-46 | 160 |
Msa0473850 | AT1G52890.1 | 47.333 | 150 | 77 | 1 | 9 | 158 | 16 | 163 | 3.62e-46 | 160 |
Msa0473850 | AT3G15170.1 | 48.765 | 162 | 77 | 3 | 6 | 163 | 19 | 178 | 7.30e-46 | 159 |
Msa0473850 | AT3G15500.1 | 46.667 | 150 | 78 | 1 | 9 | 158 | 16 | 163 | 9.48e-46 | 159 |
Msa0473850 | AT5G53950.1 | 50.311 | 161 | 72 | 4 | 2 | 157 | 12 | 169 | 3.04e-45 | 159 |
Msa0473850 | AT5G08790.1 | 46.626 | 163 | 78 | 4 | 3 | 159 | 2 | 161 | 3.33e-45 | 157 |
Msa0473850 | AT1G56010.2 | 45.506 | 178 | 90 | 4 | 1 | 174 | 14 | 188 | 3.45e-45 | 158 |
Msa0473850 | AT3G04060.1 | 49.677 | 155 | 73 | 3 | 9 | 160 | 22 | 174 | 6.63e-45 | 157 |
Msa0473850 | AT1G79580.3 | 48.026 | 152 | 74 | 3 | 9 | 158 | 19 | 167 | 7.23e-45 | 158 |
Msa0473850 | AT1G79580.5 | 48.026 | 152 | 74 | 3 | 9 | 158 | 19 | 167 | 7.23e-45 | 158 |
Msa0473850 | AT1G79580.4 | 48.026 | 152 | 74 | 3 | 9 | 158 | 19 | 167 | 7.23e-45 | 158 |
Msa0473850 | AT1G79580.2 | 48.026 | 152 | 74 | 3 | 9 | 158 | 19 | 167 | 7.23e-45 | 158 |
Msa0473850 | AT1G79580.1 | 48.026 | 152 | 74 | 3 | 9 | 158 | 19 | 167 | 7.23e-45 | 158 |
Msa0473850 | AT1G32510.1 | 45.000 | 160 | 80 | 2 | 6 | 157 | 5 | 164 | 2.01e-44 | 154 |
Msa0473850 | AT5G62380.2 | 48.684 | 152 | 73 | 3 | 9 | 158 | 9 | 157 | 2.93e-44 | 156 |
Msa0473850 | AT5G62380.1 | 48.684 | 152 | 73 | 3 | 9 | 158 | 9 | 157 | 2.93e-44 | 156 |
Msa0473850 | AT5G66300.1 | 45.181 | 166 | 85 | 4 | 9 | 171 | 14 | 176 | 4.09e-44 | 154 |
Msa0473850 | AT3G12977.1 | 46.753 | 154 | 79 | 2 | 9 | 161 | 20 | 171 | 1.48e-43 | 152 |
Msa0473850 | AT1G61110.1 | 47.531 | 162 | 70 | 4 | 9 | 157 | 18 | 177 | 2.73e-43 | 152 |
Msa0473850 | AT2G02450.1 | 44.516 | 155 | 81 | 3 | 6 | 159 | 50 | 200 | 4.01e-43 | 154 |
Msa0473850 | AT3G04070.2 | 44.099 | 161 | 76 | 3 | 9 | 157 | 12 | 170 | 4.65e-43 | 152 |
Msa0473850 | AT2G02450.2 | 44.516 | 155 | 81 | 3 | 6 | 159 | 50 | 200 | 4.81e-43 | 154 |
Msa0473850 | AT4G27410.3 | 40.462 | 173 | 88 | 1 | 9 | 166 | 16 | 188 | 1.00e-42 | 151 |
Msa0473850 | AT5G39820.1 | 42.857 | 175 | 75 | 5 | 6 | 157 | 19 | 191 | 1.01e-42 | 152 |
Msa0473850 | AT1G26870.1 | 44.785 | 163 | 77 | 4 | 6 | 157 | 15 | 175 | 1.41e-42 | 153 |
Msa0473850 | AT5G13180.1 | 48.125 | 160 | 71 | 4 | 9 | 164 | 16 | 167 | 2.37e-42 | 148 |
Msa0473850 | AT1G76420.1 | 48.366 | 153 | 74 | 3 | 9 | 159 | 24 | 173 | 3.39e-42 | 150 |
Msa0473850 | AT3G15510.1 | 43.069 | 202 | 89 | 9 | 11 | 198 | 21 | 210 | 3.42e-42 | 151 |
Msa0473850 | AT5G63790.1 | 44.785 | 163 | 81 | 4 | 3 | 159 | 45 | 204 | 6.27e-42 | 149 |
Msa0473850 | AT5G63790.2 | 44.785 | 163 | 81 | 4 | 3 | 159 | 55 | 214 | 7.95e-42 | 149 |
Msa0473850 | AT3G04070.1 | 35.507 | 276 | 156 | 7 | 9 | 277 | 12 | 272 | 8.92e-42 | 150 |
Msa0473850 | AT2G33480.1 | 51.634 | 153 | 63 | 4 | 9 | 158 | 17 | 161 | 1.87e-41 | 146 |
Msa0473850 | AT2G17040.1 | 44.444 | 153 | 75 | 4 | 8 | 157 | 7 | 152 | 3.15e-41 | 146 |
Msa0473850 | AT2G33480.2 | 50.000 | 152 | 65 | 3 | 9 | 158 | 17 | 159 | 3.99e-41 | 145 |
Msa0473850 | AT2G43000.1 | 42.949 | 156 | 86 | 2 | 3 | 157 | 14 | 167 | 2.87e-40 | 143 |
Msa0473850 | AT1G32770.1 | 41.975 | 162 | 83 | 2 | 9 | 159 | 18 | 179 | 3.86e-40 | 145 |
Msa0473850 | AT3G61910.1 | 43.636 | 165 | 75 | 4 | 9 | 157 | 13 | 175 | 8.98e-40 | 144 |
Msa0473850 | AT2G46770.1 | 40.964 | 166 | 80 | 3 | 9 | 158 | 18 | 181 | 2.33e-39 | 143 |
Msa0473850 | AT1G52880.1 | 45.283 | 159 | 73 | 4 | 11 | 157 | 21 | 177 | 1.08e-38 | 140 |
Msa0473850 | AT5G04395.1 | 43.452 | 168 | 77 | 4 | 2 | 155 | 24 | 187 | 1.95e-36 | 130 |
Msa0473850 | AT4G28530.1 | 43.114 | 167 | 71 | 4 | 9 | 157 | 12 | 172 | 6.01e-36 | 134 |
Msa0473850 | AT3G12910.1 | 38.953 | 172 | 85 | 4 | 3 | 157 | 17 | 185 | 3.79e-34 | 128 |
Msa0473850 | AT5G61430.2 | 55.046 | 109 | 47 | 1 | 57 | 163 | 1 | 109 | 7.84e-34 | 126 |
Msa0473850 | AT1G56010.1 | 47.863 | 117 | 58 | 1 | 61 | 174 | 5 | 121 | 1.51e-30 | 117 |
Msa0473850 | AT3G12977.2 | 49.524 | 105 | 52 | 1 | 59 | 162 | 15 | 119 | 1.73e-30 | 116 |
Msa0473850 | AT4G10350.2 | 50.526 | 95 | 47 | 0 | 64 | 158 | 20 | 114 | 1.26e-29 | 115 |
Msa0473850 | AT3G10490.4 | 53.922 | 102 | 45 | 2 | 81 | 181 | 1 | 101 | 4.26e-29 | 115 |
Msa0473850 | AT3G10490.3 | 53.922 | 102 | 45 | 2 | 81 | 181 | 1 | 101 | 4.26e-29 | 115 |
Msa0473850 | AT4G01520.1 | 40.000 | 155 | 79 | 5 | 10 | 157 | 7 | 154 | 5.71e-29 | 114 |
Msa0473850 | AT4G01550.1 | 40.698 | 172 | 83 | 7 | 10 | 171 | 7 | 169 | 1.29e-28 | 115 |
Msa0473850 | AT5G22380.1 | 38.217 | 157 | 90 | 5 | 10 | 159 | 8 | 164 | 2.15e-28 | 111 |
Msa0473850 | AT4G01540.3 | 40.000 | 155 | 79 | 5 | 10 | 157 | 7 | 154 | 4.27e-28 | 114 |
Msa0473850 | AT3G44350.2 | 38.710 | 155 | 90 | 5 | 10 | 159 | 8 | 162 | 5.39e-28 | 110 |
Msa0473850 | AT4G01540.4 | 40.000 | 155 | 79 | 5 | 10 | 157 | 7 | 154 | 6.52e-28 | 113 |
Msa0473850 | AT4G01540.2 | 40.000 | 155 | 79 | 5 | 10 | 157 | 7 | 154 | 6.62e-28 | 113 |
Msa0473850 | AT4G01540.1 | 40.000 | 155 | 79 | 5 | 10 | 157 | 7 | 154 | 6.94e-28 | 114 |
Msa0473850 | AT1G02230.1 | 40.127 | 157 | 77 | 6 | 6 | 154 | 1 | 148 | 2.51e-25 | 105 |
Msa0473850 | AT3G44350.1 | 37.908 | 153 | 90 | 5 | 10 | 157 | 8 | 160 | 2.79e-25 | 100 |
Msa0473850 | AT3G04420.2 | 37.333 | 150 | 87 | 2 | 10 | 157 | 6 | 150 | 2.57e-24 | 101 |
Msa0473850 | AT3G04420.1 | 37.333 | 150 | 87 | 2 | 10 | 157 | 6 | 150 | 7.06e-24 | 101 |
Msa0473850 | AT2G33480.3 | 49.524 | 105 | 49 | 3 | 57 | 158 | 1 | 104 | 1.45e-23 | 97.4 |
Msa0473850 | AT1G02250.1 | 38.816 | 152 | 77 | 5 | 10 | 154 | 6 | 148 | 1.13e-21 | 95.1 |
Msa0473850 | AT5G64530.1 | 35.329 | 167 | 74 | 7 | 9 | 157 | 5 | 155 | 1.25e-20 | 88.6 |
Msa0473850 | AT5G64530.2 | 40.909 | 132 | 58 | 6 | 9 | 136 | 5 | 120 | 6.49e-20 | 85.9 |
Msa0473850 | AT1G01010.1 | 38.608 | 158 | 74 | 7 | 10 | 154 | 6 | 153 | 6.59e-20 | 90.9 |
Msa0473850 | AT1G02220.1 | 35.294 | 153 | 79 | 5 | 10 | 155 | 6 | 145 | 1.14e-19 | 89.7 |
Msa0473850 | AT2G18060.2 | 36.364 | 121 | 65 | 3 | 87 | 206 | 2 | 111 | 3.16e-19 | 87.0 |
Msa0473850 | AT4G28530.2 | 38.281 | 128 | 59 | 3 | 9 | 118 | 12 | 137 | 4.74e-19 | 87.0 |
Msa0473850 | AT5G22290.2 | 42.222 | 90 | 37 | 2 | 87 | 167 | 1 | 84 | 8.44e-18 | 82.0 |
Msa0473850 | AT2G43000.2 | 39.080 | 87 | 52 | 1 | 72 | 157 | 3 | 89 | 2.28e-15 | 74.3 |
Msa0473850 | AT3G56530.1 | 30.263 | 152 | 95 | 4 | 9 | 155 | 54 | 199 | 2.45e-14 | 73.6 |
Msa0473850 | AT5G14000.2 | 33.071 | 127 | 79 | 3 | 10 | 134 | 18 | 140 | 1.70e-12 | 65.1 |
Msa0473850 | AT5G14000.1 | 33.071 | 127 | 79 | 3 | 10 | 134 | 18 | 140 | 3.79e-12 | 65.5 |
Msa0473850 | AT3G55210.1 | 25.904 | 166 | 99 | 6 | 6 | 155 | 10 | 167 | 3.44e-11 | 63.5 |
Msa0473850 | AT1G28470.1 | 30.939 | 181 | 99 | 9 | 10 | 173 | 80 | 251 | 3.58e-11 | 63.9 |
Msa0473850 | AT3G04430.1 | 30.435 | 138 | 72 | 6 | 13 | 133 | 6 | 136 | 4.43e-11 | 62.0 |
Find 165 sgRNAs with CRISPR-Local
Find 398 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGTTTCTGTTTGTTGAATT+TGG | 0.123004 | 3_3:+76579819 | Msa0473850:five_prime_UTR |
CTTCTCCGTCTTCAATTATT+AGG | 0.126880 | 3_3:+76579680 | Msa0473850:five_prime_UTR |
TCCCAGTCTTTCTCATTAAA+TGG | 0.189856 | 3_3:-76581735 | None:intergenic |
TGTTTCTGTTTGTTGAATTT+GGG | 0.192648 | 3_3:+76579820 | Msa0473850:five_prime_UTR |
TGAATTTGAACATTGATTTC+TGG | 0.198998 | 3_3:+76584187 | Msa0473850:three_prime_UTR |
GTATTTATAATAGGATTATT+TGG | 0.207819 | 3_3:-76579337 | None:intergenic |
TGTCATTTACTTCAGAAATA+TGG | 0.230925 | 3_3:-76581839 | None:intergenic |
TCCATACTGTGCACCATTCC+TGG | 0.233076 | 3_3:-76581709 | None:intergenic |
ATCTCATTTGGAATTAAATA+AGG | 0.245537 | 3_3:-76583783 | None:intergenic |
GTACCTTATATGACATAATT+TGG | 0.249762 | 3_3:+76584062 | Msa0473850:three_prime_UTR |
CAATCAGTTCGGTCTCCTTT+AGG | 0.274643 | 3_3:-76580393 | None:intergenic |
AGCTGTTTCTGTTTCTGTTT+GGG | 0.308393 | 3_3:+76579874 | Msa0473850:five_prime_UTR |
TGACATTGCTGTTGCGCTTA+AGG | 0.311635 | 3_3:+76579788 | Msa0473850:five_prime_UTR |
TTCTCCGTCTTCAATTATTA+GGG | 0.314791 | 3_3:+76579681 | Msa0473850:five_prime_UTR |
AAGCTGTTTCTGTTTCTGTT+TGG | 0.317698 | 3_3:+76579873 | Msa0473850:five_prime_UTR |
GGAAGGGTAGTATTTATAAT+AGG | 0.328380 | 3_3:-76579346 | None:intergenic |
CTGCCAAATTATGTCATATA+AGG | 0.338830 | 3_3:-76584065 | None:intergenic |
GCTTGATCACAGTTATTTGT+TGG | 0.357488 | 3_3:+76584244 | Msa0473850:three_prime_UTR |
GTGCAATATTTCTTTCCAAC+AGG | 0.361824 | 3_3:-76580243 | None:intergenic |
TCAAGCAACTCAAAGAAATC+AGG | 0.367048 | 3_3:-76583939 | None:intergenic |
TTTCTGTTTCTGTTTGGGTT+TGG | 0.370100 | 3_3:+76579879 | Msa0473850:five_prime_UTR |
GGGGTTGCTTCTCTCTCTTC+CGG | 0.374828 | 3_3:-76579280 | None:intergenic |
GGTGCAGACACAGCAGCAAC+AGG | 0.376155 | 3_3:-76581792 | None:intergenic |
GAAACAAAATTGATGATTCC+AGG | 0.377486 | 3_3:+76579928 | Msa0473850:CDS |
TGTTTAGTCTGCCAGGATAA+TGG | 0.379048 | 3_3:-76583972 | None:intergenic |
TGTTTAGTCTGCCAGGATAA+TGG | 0.379048 | 3_3:-76584031 | None:intergenic |
ACAATCGTCGCAGCAGGCTT+TGG | 0.383872 | 3_3:+76579625 | Msa0473850:five_prime_UTR |
CCCAGGAATGGTGCACAGTA+TGG | 0.387270 | 3_3:+76581708 | Msa0473850:CDS |
AGAACTCCTATGTGATTTGT+AGG | 0.387741 | 3_3:+76581661 | Msa0473850:intron |
AACCATTTAATGAGAAAGAC+TGG | 0.390374 | 3_3:+76581733 | Msa0473850:CDS |
AGTTCAGCAATGACATGAAA+AGG | 0.397881 | 3_3:-76580024 | None:intergenic |
CCCTCTGCAAGTGGATGTAT+TGG | 0.400344 | 3_3:+76581867 | Msa0473850:CDS |
ATTCATCAGTTTACATATGT+TGG | 0.409632 | 3_3:-76584216 | None:intergenic |
GCACGGGAGGGAGGATGAAT+CGG | 0.411671 | 3_3:+76580262 | Msa0473850:CDS |
TATTAACAGCTTGGTTGGAT+TGG | 0.414108 | 3_3:+76583824 | Msa0473850:CDS |
CCATACTGTGCACCATTCCT+GGG | 0.415740 | 3_3:-76581708 | None:intergenic |
GGAATATCTTCTTCCGCCAT+TGG | 0.422112 | 3_3:+76579646 | Msa0473850:five_prime_UTR |
ACATAAAATCGCCTCGTTCG+CGG | 0.439243 | 3_3:+76579398 | Msa0473850:five_prime_UTR |
GGAGATATTAACAGCTTGGT+TGG | 0.445872 | 3_3:+76583819 | Msa0473850:CDS |
TCCATCATGTTTAGTCTGCC+AGG | 0.448649 | 3_3:-76584038 | None:intergenic |
GGAAAATTGTTGCTTGGTGG+AGG | 0.453529 | 3_3:-76579301 | None:intergenic |
GACGATGAAAATGCATTGGC+CGG | 0.464243 | 3_3:+76581999 | Msa0473850:CDS |
ACCTAGAGGTGCCATTATCC+TGG | 0.465437 | 3_3:+76583961 | Msa0473850:CDS |
ACCTAGAGGTGCCATTATCC+TGG | 0.465437 | 3_3:+76584020 | Msa0473850:three_prime_UTR |
ATGAATCGGGCAACAGAAGT+AGG | 0.466475 | 3_3:+76580276 | Msa0473850:CDS |
CTAAAGGAGACCGAACTGAT+TGG | 0.467195 | 3_3:+76580394 | Msa0473850:CDS |
TGGTACTTCTTTACCCCTGT+TGG | 0.468244 | 3_3:+76580228 | Msa0473850:CDS |
GCCATCATGTTTAGTCTGCC+AGG | 0.468396 | 3_3:-76583979 | None:intergenic |
ATAAACGAAAAGCTATTTGC+TGG | 0.469573 | 3_3:+76583891 | Msa0473850:CDS |
AAAAGGAAGGTCCTGGTCCC+AGG | 0.470057 | 3_3:+76581691 | Msa0473850:CDS |
AAAATTGTTGCTTGGTGGAG+GGG | 0.475271 | 3_3:-76579299 | None:intergenic |
TAAAGGAGACCGAACTGATT+GGG | 0.479184 | 3_3:+76580395 | Msa0473850:CDS |
CACGGGAGGGAGGATGAATC+GGG | 0.479266 | 3_3:+76580263 | Msa0473850:CDS |
TGAAGAGAAAATGTTGAGAC+TGG | 0.482912 | 3_3:-76579596 | None:intergenic |
CTTTGAGTTGCTTGACCTAG+AGG | 0.489029 | 3_3:+76583947 | Msa0473850:CDS |
CGACAGAAGGTTGATAATCC+TGG | 0.495670 | 3_3:+76583735 | Msa0473850:intron |
ACGACACACCCTTCAGCTCT+AGG | 0.498439 | 3_3:+76581933 | Msa0473850:CDS |
TCAGCGTTGTTTGCTTGACC+AGG | 0.500954 | 3_3:-76583753 | None:intergenic |
CATTTACAAGTATGCTCCAT+GGG | 0.502977 | 3_3:+76580050 | Msa0473850:CDS |
CCGTTGTAAGACATTGTATG+TGG | 0.504987 | 3_3:+76584147 | Msa0473850:three_prime_UTR |
TCACCCCACTGATGTTGAGC+TGG | 0.506550 | 3_3:+76579960 | Msa0473850:CDS |
CTATCAAGATTGATGCCCTC+TGG | 0.507191 | 3_3:+76581909 | Msa0473850:CDS |
CACACTGGCAAAGCTCCTAA+AGG | 0.508822 | 3_3:+76580378 | Msa0473850:CDS |
GGGCAACAGAAGTAGGGTAC+TGG | 0.511584 | 3_3:+76580283 | Msa0473850:CDS |
GTAGGGTACTGGAAGACTAC+AGG | 0.511858 | 3_3:+76580294 | Msa0473850:CDS |
GGTGCTTTCTCATCCTTCTC+CGG | 0.514866 | 3_3:+76579419 | Msa0473850:five_prime_UTR |
GTTTCTGTTTGTTGAATTTG+GGG | 0.517264 | 3_3:+76579821 | Msa0473850:five_prime_UTR |
GCTTGATTGCCTAGAGCTGA+AGG | 0.517653 | 3_3:-76581942 | None:intergenic |
TGAATAACAATCGTCGCAGC+AGG | 0.518056 | 3_3:+76579619 | Msa0473850:five_prime_UTR |
CTTTGCCAGTGTGAAACACC+AGG | 0.519578 | 3_3:-76580368 | None:intergenic |
GTTCAGCAATGACATGAAAA+GGG | 0.521712 | 3_3:-76580023 | None:intergenic |
CCTGGGAGATATTAACAGCT+TGG | 0.523071 | 3_3:+76583815 | Msa0473850:CDS |
GTGGAACACCATTGTCAGCT+AGG | 0.523981 | 3_3:-76580449 | None:intergenic |
GAGAAAATGTTGAGACTGGA+AGG | 0.524796 | 3_3:-76579592 | None:intergenic |
GATTTGTAGGGTATTTCAAA+AGG | 0.527496 | 3_3:+76581674 | Msa0473850:CDS |
GAGAGTGTATGAAGCACGGA+AGG | 0.527886 | 3_3:-76579363 | None:intergenic |
AGCTTGGTTGGATTGGATGA+TGG | 0.527918 | 3_3:+76583831 | Msa0473850:CDS |
TGTAGGGTATTTCAAAAGGA+AGG | 0.527921 | 3_3:+76581678 | Msa0473850:CDS |
GCTACAACGGATGGTGATGA+TGG | 0.530888 | 3_3:-76579570 | None:intergenic |
TCCAATACATCCACTTGCAG+AGG | 0.532823 | 3_3:-76581868 | None:intergenic |
TTTCGACGATGAAAATGCAT+TGG | 0.532966 | 3_3:+76581995 | Msa0473850:CDS |
ATCGTCGAAAATAGCAAGCA+TGG | 0.533664 | 3_3:-76581982 | None:intergenic |
AATGGAAAATTGTTGCTTGG+TGG | 0.535723 | 3_3:-76579304 | None:intergenic |
AAGAGGAAGCTTACCGGAGA+AGG | 0.538649 | 3_3:-76579432 | None:intergenic |
CATGCATAACCCAATCAGTT+CGG | 0.542397 | 3_3:-76580404 | None:intergenic |
CAAGCAACTCAAAGAAATCA+GGG | 0.542667 | 3_3:-76583938 | None:intergenic |
TCTTCCGGTGAGTGAGTAAG+AGG | 0.544744 | 3_3:-76579265 | None:intergenic |
AGCTGACAATGGTGTTCCAC+AGG | 0.546378 | 3_3:+76580452 | Msa0473850:CDS |
GAAAATTGTTGCTTGGTGGA+GGG | 0.547369 | 3_3:-76579300 | None:intergenic |
AGAAATATTGCACGGGAGGG+AGG | 0.549227 | 3_3:+76580253 | Msa0473850:CDS |
TCTTGATAGACATGATAAAG+AGG | 0.553266 | 3_3:-76581895 | None:intergenic |
TCCAAACCTGGTAGATCCCA+TGG | 0.553951 | 3_3:-76580066 | None:intergenic |
AAACAAAATTGATGATTCCA+GGG | 0.554783 | 3_3:+76579929 | Msa0473850:CDS |
GAACATAAGAATCAAGTGGT+GGG | 0.560868 | 3_3:+76580333 | Msa0473850:CDS |
TGCAATATTTCTTTCCAACA+GGG | 0.561122 | 3_3:-76580242 | None:intergenic |
GAAGGTCCTGGTCCCAGGAA+TGG | 0.561485 | 3_3:+76581696 | Msa0473850:CDS |
ACAAGAATTTACTCAAACAA+AGG | 0.564360 | 3_3:-76584272 | None:intergenic |
GACTGGAAGGCTACAACGGA+TGG | 0.568610 | 3_3:-76579579 | None:intergenic |
TCAGAAATATGGCTTGAGCT+AGG | 0.568979 | 3_3:-76581828 | None:intergenic |
GATAAATCTTTGCTCAAGAG+TGG | 0.570392 | 3_3:+76580195 | Msa0473850:intron |
GTTGGATTGGATGATGGAAG+CGG | 0.572350 | 3_3:+76583837 | Msa0473850:CDS |
GGAAGACTACAGGGAAGGAT+AGG | 0.572952 | 3_3:+76580304 | Msa0473850:CDS |
CTAATAATTGAAGACGGAGA+AGG | 0.573119 | 3_3:-76579679 | None:intergenic |
ACATTTACAAGTATGCTCCA+TGG | 0.574983 | 3_3:+76580049 | Msa0473850:CDS |
TCCTGGCAGACTAAACATGA+TGG | 0.576156 | 3_3:+76584037 | Msa0473850:three_prime_UTR |
ACGATGAAAATGCATTGGCC+GGG | 0.583391 | 3_3:+76582000 | Msa0473850:CDS |
GTATTTCAAAAGGAAGGTCC+TGG | 0.583445 | 3_3:+76581684 | Msa0473850:CDS |
GAACTCCTATGTGATTTGTA+GGG | 0.583857 | 3_3:+76581662 | Msa0473850:intron |
TGAAGGGTGTGTCGTGCCAG+AGG | 0.584025 | 3_3:-76581925 | None:intergenic |
TCCACCTCTTACTCACTCAC+CGG | 0.586162 | 3_3:+76579261 | None:intergenic |
AACATAAGAATCAAGTGGTG+GGG | 0.590194 | 3_3:+76580334 | Msa0473850:CDS |
GAAGGGTGTGTCGTGCCAGA+GGG | 0.592236 | 3_3:-76581924 | None:intergenic |
TTCTGAGTTACTTGACCTAG+AGG | 0.592289 | 3_3:+76584006 | Msa0473850:three_prime_UTR |
TGAATCGGGCAACAGAAGTA+GGG | 0.592463 | 3_3:+76580277 | Msa0473850:CDS |
GGTCAAGCAAACAACGCTGA+AGG | 0.593547 | 3_3:+76583756 | Msa0473850:CDS |
CAACAAACAGAAACAAACTC+TGG | 0.595937 | 3_3:-76579812 | None:intergenic |
ATTACCAGCTCAACATCAGT+GGG | 0.596276 | 3_3:-76579964 | None:intergenic |
ATGAGAAAGCACCGCGAACG+AGG | 0.596637 | 3_3:-76579409 | None:intergenic |
GGAAAGAAATATTGCACGGG+AGG | 0.596853 | 3_3:+76580249 | Msa0473850:CDS |
GACATGCATCCCTCTGCAAG+TGG | 0.596887 | 3_3:+76581858 | Msa0473850:CDS |
AGAACCCTGGTGTTTCACAC+TGG | 0.601634 | 3_3:+76580363 | Msa0473850:CDS |
GAGAGAGAGTGTATGAAGCA+CGG | 0.602258 | 3_3:-76579367 | None:intergenic |
GCCAGGATAATGGCACCTCT+AGG | 0.602723 | 3_3:-76583962 | None:intergenic |
GCCAGGATAATGGCACCTCT+AGG | 0.602723 | 3_3:-76584021 | None:intergenic |
TGTGCACCATTCCTGGGACC+AGG | 0.603992 | 3_3:-76581702 | None:intergenic |
GTGGGGTGAAAACGAAACCC+TGG | 0.604367 | 3_3:-76579946 | None:intergenic |
CATTACCAGCTCAACATCAG+TGG | 0.606060 | 3_3:-76579965 | None:intergenic |
AGCAACTCAAAGAAATCAGG+GGG | 0.608948 | 3_3:-76583936 | None:intergenic |
TCCGGTGAGTGAGTAAGAGG+TGG | 0.610007 | 3_3:-76579262 | None:intergenic |
TCCTGGCAGACTAAACATGA+TGG | 0.610442 | 3_3:+76583978 | Msa0473850:CDS |
CCAAGCTGTTAATATCTCCC+AGG | 0.614179 | 3_3:-76583815 | None:intergenic |
CTTGATTGCCTAGAGCTGAA+GGG | 0.615214 | 3_3:-76581941 | None:intergenic |
GAATGAAAACAATGGATCTG+AGG | 0.618267 | 3_3:+76582022 | Msa0473850:CDS |
GCAATATTTCTTTCCAACAG+GGG | 0.618582 | 3_3:-76580241 | None:intergenic |
CCAATACATCCACTTGCAGA+GGG | 0.625389 | 3_3:-76581867 | None:intergenic |
GAGCTAGGTAGAATGAGAGC+TGG | 0.627457 | 3_3:-76581813 | None:intergenic |
GTTGGAAAGAAATATTGCAC+GGG | 0.629534 | 3_3:+76580246 | Msa0473850:CDS |
TGAACATAAGAATCAAGTGG+TGG | 0.630537 | 3_3:+76580332 | Msa0473850:CDS |
TGTTGGAAAGAAATATTGCA+CGG | 0.632190 | 3_3:+76580245 | Msa0473850:CDS |
TTTCTGTTTGTTGAATTTGG+GGG | 0.633894 | 3_3:+76579822 | Msa0473850:five_prime_UTR |
ACCATTTAATGAGAAAGACT+GGG | 0.636505 | 3_3:+76581734 | Msa0473850:CDS |
AGAAGGAAGATCAAGTCCAA+TGG | 0.639679 | 3_3:-76579662 | None:intergenic |
TATGCTCCATGGGATCTACC+AGG | 0.645247 | 3_3:+76580060 | Msa0473850:CDS |
TAGGGTACTGGAAGACTACA+GGG | 0.648401 | 3_3:+76580295 | Msa0473850:CDS |
TTGGCCGGGAATGAAAACAA+TGG | 0.650090 | 3_3:+76582014 | Msa0473850:CDS |
ACAACCCTAATAATTGAAGA+CGG | 0.651257 | 3_3:-76579685 | None:intergenic |
GACAAAGACCTAGCTGACAA+TGG | 0.652509 | 3_3:+76580441 | Msa0473850:CDS |
AGAGTGTATGAAGCACGGAA+GGG | 0.653850 | 3_3:-76579362 | None:intergenic |
TTGAGACTGGAAGGCTACAA+CGG | 0.654683 | 3_3:-76579583 | None:intergenic |
GTGCAGACACAGCAGCAACA+GGG | 0.657913 | 3_3:-76581791 | None:intergenic |
AAATACCCTACAAATCACAT+AGG | 0.659266 | 3_3:-76581667 | None:intergenic |
TCAAGAGTGGTGATTTGCAA+TGG | 0.660182 | 3_3:+76580208 | Msa0473850:CDS |
CCACATACAATGTCTTACAA+CGG | 0.670248 | 3_3:-76584147 | None:intergenic |
AGGAAGATCAAGTCCAATGG+CGG | 0.670387 | 3_3:-76579659 | None:intergenic |
GTGATGATAAGAAAAGTCAT+CGG | 0.671182 | 3_3:-76579543 | None:intergenic |
GAAAGAAATATTGCACGGGA+GGG | 0.676449 | 3_3:+76580250 | Msa0473850:CDS |
GATTGAACATAAGAATCAAG+TGG | 0.676975 | 3_3:+76580329 | Msa0473850:CDS |
GTACTGGAAGACTACAGGGA+AGG | 0.680520 | 3_3:+76580299 | Msa0473850:CDS |
AAGCAACTCAAAGAAATCAG+GGG | 0.683918 | 3_3:-76583937 | None:intergenic |
AAGAAAAGTCATCGGCACAG+TGG | 0.690558 | 3_3:-76579535 | None:intergenic |
GAAAGACTGGGATAGCGAAG+AGG | 0.695888 | 3_3:+76581746 | Msa0473850:CDS |
TTTGCCAGTGTGAAACACCA+GGG | 0.703208 | 3_3:-76580367 | None:intergenic |
GGTGGGGATGATAAGAACCC+TGG | 0.707991 | 3_3:+76580350 | Msa0473850:CDS |
GCAACTCAAAGAAATCAGGG+GGG | 0.804791 | 3_3:-76583935 | None:intergenic |
TTACCAGCTCAACATCAGTG+GGG | 0.822926 | 3_3:-76579963 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATGTTAAAAATAAAAAAGA+GGG | - | chr3_3:76579723-76579742 | None:intergenic | 10.0% |
!! | AATTATTATTAGTATTAACA+AGG | + | chr3_3:76580950-76580969 | Msa0473850:intron | 10.0% |
!! | ATTATTATTAGTATTAACAA+GGG | + | chr3_3:76580951-76580970 | Msa0473850:intron | 10.0% |
!! | TTATTATTAGTATTAATAAG+GGG | + | chr3_3:76580987-76581006 | Msa0473850:intron | 10.0% |
!! | AAAAAAAATAAAAAAAGTTG+AGG | - | chr3_3:76582160-76582179 | None:intergenic | 10.0% |
!!! | ATTTTTGTTAAAAAAATTTG+GGG | + | chr3_3:76583080-76583099 | Msa0473850:intron | 10.0% |
!! | TTATTTGGAAAAAAGAAAAA+TGG | - | chr3_3:76579325-76579344 | None:intergenic | 15.0% |
!! | GTATTTATAATAGGATTATT+TGG | - | chr3_3:76579340-76579359 | None:intergenic | 15.0% |
!! | CAATGTTAAAAATAAAAAAG+AGG | - | chr3_3:76579724-76579743 | None:intergenic | 15.0% |
!! | ATAACTAAAAAACAAAAACT+AGG | - | chr3_3:76579762-76579781 | None:intergenic | 15.0% |
!!! | ACTAATAATAATTTGTCTTA+GGG | - | chr3_3:76580943-76580962 | None:intergenic | 15.0% |
!!! | TACTAATAATAATTTGTCTT+AGG | - | chr3_3:76580944-76580963 | None:intergenic | 15.0% |
!! | TTATTATTAGTATTAACAAG+GGG | + | chr3_3:76580952-76580971 | Msa0473850:intron | 15.0% |
!!! | ACTAATAATAATTTGTCTTA+GGG | - | chr3_3:76580943-76580962 | None:intergenic | 15.0% |
!!! | TACTAATAATAATTTGTCTT+AGG | - | chr3_3:76580944-76580963 | None:intergenic | 15.0% |
!! | TTGAAATAAGACTTATATTT+AGG | + | chr3_3:76581045-76581064 | Msa0473850:intron | 15.0% |
!!! | ATTTCTCTTATTTGTTTTTT+TGG | + | chr3_3:76581204-76581223 | Msa0473850:intron | 15.0% |
!!! | TTTTTGTTAAAAAAATTTGG+GGG | + | chr3_3:76583081-76583100 | Msa0473850:intron | 15.0% |
!!! | TTATAGTATTTTCATCTTTT+TGG | - | chr3_3:76583875-76583894 | None:intergenic | 15.0% |
!!! | AATTTGATAATGCAATGTTA+GGG | + | chr3_3:76579510-76579529 | Msa0473850:intron | 20.0% |
!!! | TTTTCTTTTTGATTTTTCGA+TGG | + | chr3_3:76579903-76579922 | Msa0473850:exon | 20.0% |
!! | ATATGTCAATAATCAAAAAC+TGG | - | chr3_3:76580618-76580637 | None:intergenic | 20.0% |
!!! | TATTTGTTTTTTTGGAAACT+TGG | + | chr3_3:76581212-76581231 | Msa0473850:intron | 20.0% |
!! | TCAAAGATAACTAAAAAAAG+AGG | - | chr3_3:76582212-76582231 | None:intergenic | 20.0% |
!! | AGCAAAAAAAAATGAGAAAT+CGG | + | chr3_3:76582410-76582429 | Msa0473850:intron | 20.0% |
!! | TACTTTCTACACATATTTAT+AGG | - | chr3_3:76582475-76582494 | None:intergenic | 20.0% |
!!! | TATTGTATTCTGCATTTTTT+GGG | + | chr3_3:76582954-76582973 | Msa0473850:intron | 20.0% |
!! | ATGAAAGTTTGTAAATTAGT+TGG | + | chr3_3:76583373-76583392 | Msa0473850:intron | 20.0% |
!!! | TGCTTCTTAATTTATTTCTT+TGG | - | chr3_3:76583407-76583426 | None:intergenic | 20.0% |
!! | AAAGAAATAAATTAAGAAGC+AGG | + | chr3_3:76583406-76583425 | Msa0473850:intron | 20.0% |
!!! | ATCTCATTTGGAATTAAATA+AGG | - | chr3_3:76583786-76583805 | None:intergenic | 20.0% |
! | AAAAATGGAAAATTGTTGCT+TGG | - | chr3_3:76579310-76579329 | None:intergenic | 25.0% |
!!! | GAATTTGATAATGCAATGTT+AGG | + | chr3_3:76579509-76579528 | Msa0473850:intron | 25.0% |
!!! | TTGTTTCTGTTTGTTGAATT+TGG | + | chr3_3:76579819-76579838 | Msa0473850:five_prime_UTR | 25.0% |
!! | TGTTTCTGTTTGTTGAATTT+GGG | + | chr3_3:76579820-76579839 | Msa0473850:five_prime_UTR | 25.0% |
!!! | TGGAATCATCAATTTTGTTT+CGG | - | chr3_3:76579929-76579948 | None:intergenic | 25.0% |
!! | AAACAAAATTGATGATTCCA+GGG | + | chr3_3:76579929-76579948 | Msa0473850:CDS | 25.0% |
! | GAGGAATTATGTTTATCAAT+TGG | + | chr3_3:76580491-76580510 | Msa0473850:intron | 25.0% |
!!! | CAAAAGTATTCTCTCAAAAA+AGG | + | chr3_3:76581403-76581422 | Msa0473850:intron | 25.0% |
!! | TGTCATTTACTTCAGAAATA+TGG | - | chr3_3:76581842-76581861 | None:intergenic | 25.0% |
! | TTATATAAAACATCACACTC+TGG | + | chr3_3:76582254-76582273 | Msa0473850:intron | 25.0% |
!!! | TTCTCATTTTTTTTTGCTAC+AGG | - | chr3_3:76582408-76582427 | None:intergenic | 25.0% |
! | GTACAAAATTCTTATGCATT+AGG | + | chr3_3:76582606-76582625 | Msa0473850:intron | 25.0% |
!!! | TTTTTTTTACGCCCTATTTT+TGG | + | chr3_3:76582744-76582763 | Msa0473850:intron | 25.0% |
! | TTACAAAGATAACAAAGAGA+AGG | - | chr3_3:76582778-76582797 | None:intergenic | 25.0% |
!!! | GTATTGTATTCTGCATTTTT+TGG | + | chr3_3:76582953-76582972 | Msa0473850:intron | 25.0% |
!!! | TGCATTTTTTGGGTATATTT+TGG | + | chr3_3:76582964-76582983 | Msa0473850:intron | 25.0% |
! | AAACTTTCATTTGCACAAAA+GGG | - | chr3_3:76583363-76583382 | None:intergenic | 25.0% |
!!! | TTTTTAATGGTTAGTCAAAG+GGG | - | chr3_3:76583520-76583539 | None:intergenic | 25.0% |
!!! | GTTTTTAATGGTTAGTCAAA+GGG | - | chr3_3:76583521-76583540 | None:intergenic | 25.0% |
!!! | AGTTTTTAATGGTTAGTCAA+AGG | - | chr3_3:76583522-76583541 | None:intergenic | 25.0% |
! | TTTGACTAACCATTAAAAAC+TGG | + | chr3_3:76583521-76583540 | Msa0473850:intron | 25.0% |
!! | AATTCCAAATGAGATTTTTG+AGG | + | chr3_3:76583791-76583810 | Msa0473850:CDS | 25.0% |
! | GTACCTTATATGACATAATT+TGG | + | chr3_3:76584062-76584081 | Msa0473850:three_prime_UTR | 25.0% |
!! | TAGTTTTCTCTAGTCATATA+AGG | - | chr3_3:76584108-76584127 | None:intergenic | 25.0% |
!!! | TGAATTTGAACATTGATTTC+TGG | + | chr3_3:76584187-76584206 | Msa0473850:three_prime_UTR | 25.0% |
! | ATTCATCAGTTTACATATGT+TGG | - | chr3_3:76584219-76584238 | None:intergenic | 25.0% |
GGAAGGGTAGTATTTATAAT+AGG | - | chr3_3:76579349-76579368 | None:intergenic | 30.0% | |
ATTTCATATTCTGAGCGATT+GGG | - | chr3_3:76579488-76579507 | None:intergenic | 30.0% | |
AATTTCATATTCTGAGCGAT+TGG | - | chr3_3:76579489-76579508 | None:intergenic | 30.0% | |
GTGATGATAAGAAAAGTCAT+CGG | - | chr3_3:76579546-76579565 | None:intergenic | 30.0% | |
! | GATGACTTTTCTTATCATCA+CGG | + | chr3_3:76579545-76579564 | Msa0473850:five_prime_UTR | 30.0% |
TTCTCCGTCTTCAATTATTA+GGG | + | chr3_3:76579681-76579700 | Msa0473850:five_prime_UTR | 30.0% | |
ACAACCCTAATAATTGAAGA+CGG | - | chr3_3:76579688-76579707 | None:intergenic | 30.0% | |
! | GTTTCTGTTTGTTGAATTTG+GGG | + | chr3_3:76579821-76579840 | Msa0473850:five_prime_UTR | 30.0% |
! | TTTCTGTTTGTTGAATTTGG+GGG | + | chr3_3:76579822-76579841 | Msa0473850:five_prime_UTR | 30.0% |
! | GAAACAAAATTGATGATTCC+AGG | + | chr3_3:76579928-76579947 | Msa0473850:CDS | 30.0% |
!! | TGGTAATGTATTTTCTCAAG+AGG | + | chr3_3:76579980-76579999 | Msa0473850:CDS | 30.0% |
! | TTTTCTCAAGAGGAAGATTT+TGG | + | chr3_3:76579990-76580009 | Msa0473850:CDS | 30.0% |
! | TTTCTCAAGAGGAAGATTTT+GGG | + | chr3_3:76579991-76580010 | Msa0473850:CDS | 30.0% |
!! | GTTTTAAGCTTTTTGTCTGT+CGG | + | chr3_3:76580107-76580126 | Msa0473850:intron | 30.0% |
TGCAATATTTCTTTCCAACA+GGG | - | chr3_3:76580245-76580264 | None:intergenic | 30.0% | |
TGTTGGAAAGAAATATTGCA+CGG | + | chr3_3:76580245-76580264 | Msa0473850:CDS | 30.0% | |
GATTGAACATAAGAATCAAG+TGG | + | chr3_3:76580329-76580348 | Msa0473850:CDS | 30.0% | |
! | CCAACAAAAGCTGTAATTTT+AGG | - | chr3_3:76580648-76580667 | None:intergenic | 30.0% |
! | CCTAAAATTACAGCTTTTGT+TGG | + | chr3_3:76580645-76580664 | Msa0473850:intron | 30.0% |
GAGTTTAACATGAAAACACA+TGG | - | chr3_3:76580690-76580709 | None:intergenic | 30.0% | |
GACAAAGCTGTTTATATCAA+AGG | - | chr3_3:76580806-76580825 | None:intergenic | 30.0% | |
TAATGTATCCATTGTGTGTA+TGG | + | chr3_3:76580862-76580881 | Msa0473850:intron | 30.0% | |
!!! | TAGGAACAATTTTTTCCCAA+AGG | + | chr3_3:76581064-76581083 | Msa0473850:intron | 30.0% |
! | CTTTGAAAAAAATGGAAGGA+TGG | + | chr3_3:76581134-76581153 | Msa0473850:intron | 30.0% |
!!! | TTTTTTGGAAACTTGGTATC+CGG | + | chr3_3:76581219-76581238 | Msa0473850:intron | 30.0% |
!!! | ATTGTATTGGAGGAGTATTT+TGG | + | chr3_3:76581284-76581303 | Msa0473850:intron | 30.0% |
ACTTGGTATATTCTTAGTCT+GGG | + | chr3_3:76581558-76581577 | Msa0473850:intron | 30.0% | |
!!! | TTTTTTTCTGATTGTTCTCC+TGG | + | chr3_3:76581601-76581620 | Msa0473850:intron | 30.0% |
AGAACAGTTAAGATAAAACC+AGG | - | chr3_3:76581622-76581641 | None:intergenic | 30.0% | |
AAATACCCTACAAATCACAT+AGG | - | chr3_3:76581670-76581689 | None:intergenic | 30.0% | |
! | GATTTGTAGGGTATTTCAAA+AGG | + | chr3_3:76581674-76581693 | Msa0473850:CDS | 30.0% |
AACCATTTAATGAGAAAGAC+TGG | + | chr3_3:76581733-76581752 | Msa0473850:CDS | 30.0% | |
ACCATTTAATGAGAAAGACT+GGG | + | chr3_3:76581734-76581753 | Msa0473850:CDS | 30.0% | |
TCTTGATAGACATGATAAAG+AGG | - | chr3_3:76581898-76581917 | None:intergenic | 30.0% | |
CACATATTTATAGGTCATGT+GGG | - | chr3_3:76582466-76582485 | None:intergenic | 30.0% | |
ACACATATTTATAGGTCATG+TGG | - | chr3_3:76582467-76582486 | None:intergenic | 30.0% | |
! | ATGTATCACGTGTTATTAGA+AGG | + | chr3_3:76582666-76582685 | Msa0473850:intron | 30.0% |
CTTTCTATCAGTTTGATCAT+TGG | + | chr3_3:76582898-76582917 | Msa0473850:intron | 30.0% | |
ATAGGAAACTAAGACAAAAG+AGG | - | chr3_3:76583017-76583036 | None:intergenic | 30.0% | |
ACAAATGTCCAATGTTCTAA+TGG | - | chr3_3:76583048-76583067 | None:intergenic | 30.0% | |
TAGTCTAACATTCATTACCT+AGG | - | chr3_3:76583211-76583230 | None:intergenic | 30.0% | |
AACTTTCATTTGCACAAAAG+GGG | - | chr3_3:76583362-76583381 | None:intergenic | 30.0% | |
CAAACTTTCATTTGCACAAA+AGG | - | chr3_3:76583364-76583383 | None:intergenic | 30.0% | |
AACAAAAGAGACAGTAAGAT+TGG | - | chr3_3:76583446-76583465 | None:intergenic | 30.0% | |
!! | TCTTACTGTCTCTTTTGTTT+AGG | + | chr3_3:76583447-76583466 | Msa0473850:intron | 30.0% |
!! | CTTACTGTCTCTTTTGTTTA+GGG | + | chr3_3:76583448-76583467 | Msa0473850:intron | 30.0% |
ACTAACCATTAAAAACTGGA+AGG | + | chr3_3:76583525-76583544 | Msa0473850:intron | 30.0% | |
TTTGATCCTACTAATCAAGA+TGG | + | chr3_3:76583566-76583585 | Msa0473850:intron | 30.0% | |
!! | ATTTTCATCTTTTTGGCCAT+AGG | - | chr3_3:76583868-76583887 | None:intergenic | 30.0% |
ATAAACGAAAAGCTATTTGC+TGG | + | chr3_3:76583891-76583910 | Msa0473850:CDS | 30.0% | |
CTGCCAAATTATGTCATATA+AGG | - | chr3_3:76584068-76584087 | None:intergenic | 30.0% | |
! | AATGGAAAATTGTTGCTTGG+TGG | - | chr3_3:76579307-76579326 | None:intergenic | 35.0% |
GATGAGAATGAATGAAGAAG+AGG | - | chr3_3:76579452-76579471 | None:intergenic | 35.0% | |
TTTCATATTCTGAGCGATTG+GGG | - | chr3_3:76579487-76579506 | None:intergenic | 35.0% | |
TGAAGAGAAAATGTTGAGAC+TGG | - | chr3_3:76579599-76579618 | None:intergenic | 35.0% | |
CTAATAATTGAAGACGGAGA+AGG | - | chr3_3:76579682-76579701 | None:intergenic | 35.0% | |
CTTCTCCGTCTTCAATTATT+AGG | + | chr3_3:76579680-76579699 | Msa0473850:five_prime_UTR | 35.0% | |
CAACAAACAGAAACAAACTC+TGG | - | chr3_3:76579815-76579834 | None:intergenic | 35.0% | |
!! | AAGCTGTTTCTGTTTCTGTT+TGG | + | chr3_3:76579873-76579892 | Msa0473850:five_prime_UTR | 35.0% |
!! | AGCTGTTTCTGTTTCTGTTT+GGG | + | chr3_3:76579874-76579893 | Msa0473850:five_prime_UTR | 35.0% |
!! | TTTCTGTTTCTGTTTGGGTT+TGG | + | chr3_3:76579879-76579898 | Msa0473850:five_prime_UTR | 35.0% |
GTTCAGCAATGACATGAAAA+GGG | - | chr3_3:76580026-76580045 | None:intergenic | 35.0% | |
AGTTCAGCAATGACATGAAA+AGG | - | chr3_3:76580027-76580046 | None:intergenic | 35.0% | |
ACATTTACAAGTATGCTCCA+TGG | + | chr3_3:76580049-76580068 | Msa0473850:CDS | 35.0% | |
CATTTACAAGTATGCTCCAT+GGG | + | chr3_3:76580050-76580069 | Msa0473850:CDS | 35.0% | |
GATAAATCTTTGCTCAAGAG+TGG | + | chr3_3:76580195-76580214 | Msa0473850:intron | 35.0% | |
GCAATATTTCTTTCCAACAG+GGG | - | chr3_3:76580244-76580263 | None:intergenic | 35.0% | |
GTGCAATATTTCTTTCCAAC+AGG | - | chr3_3:76580246-76580265 | None:intergenic | 35.0% | |
GTTGGAAAGAAATATTGCAC+GGG | + | chr3_3:76580246-76580265 | Msa0473850:CDS | 35.0% | |
TGAACATAAGAATCAAGTGG+TGG | + | chr3_3:76580332-76580351 | Msa0473850:CDS | 35.0% | |
GAACATAAGAATCAAGTGGT+GGG | + | chr3_3:76580333-76580352 | Msa0473850:CDS | 35.0% | |
AACATAAGAATCAAGTGGTG+GGG | + | chr3_3:76580334-76580353 | Msa0473850:CDS | 35.0% | |
!! | TGTTTTGTTGGATGTACGTA+TGG | + | chr3_3:76580522-76580541 | Msa0473850:intron | 35.0% |
CTCAAGCTGTAAATGATTCA+TGG | + | chr3_3:76580707-76580726 | Msa0473850:intron | 35.0% | |
AGTAACATCCATACACACAA+TGG | - | chr3_3:76580873-76580892 | None:intergenic | 35.0% | |
!!! | ATTTTTTCCCAAAGGTCTGT+TGG | + | chr3_3:76581072-76581091 | Msa0473850:intron | 35.0% |
!!! | TTTTTTCCCAAAGGTCTGTT+GGG | + | chr3_3:76581073-76581092 | Msa0473850:intron | 35.0% |
!! | AGGGCTTTGAAAAAAATGGA+AGG | + | chr3_3:76581130-76581149 | Msa0473850:intron | 35.0% |
AAAAAAATGGAAGGATGGAG+TGG | + | chr3_3:76581139-76581158 | Msa0473850:intron | 35.0% | |
AACTAAACCCCTCCTAATTT+GGG | + | chr3_3:76581252-76581271 | Msa0473850:intron | 35.0% | |
! | AATTTGAGTTCCCCCAAATT+AGG | - | chr3_3:76581267-76581286 | None:intergenic | 35.0% |
!!! | TATTGGAGGAGTATTTTGGA+GGG | + | chr3_3:76581288-76581307 | Msa0473850:intron | 35.0% |
CCTAATACAAGTCCTCTTTA+GGG | - | chr3_3:76581500-76581519 | None:intergenic | 35.0% | |
CCTAAAGAGGACTTGTATTA+GGG | + | chr3_3:76581498-76581517 | Msa0473850:intron | 35.0% | |
!!! | TTGACTGTTTTAGCATGACT+TGG | + | chr3_3:76581541-76581560 | Msa0473850:intron | 35.0% |
! | GACTTGGTATATTCTTAGTC+TGG | + | chr3_3:76581557-76581576 | Msa0473850:intron | 35.0% |
! | AGAACTCCTATGTGATTTGT+AGG | + | chr3_3:76581661-76581680 | Msa0473850:intron | 35.0% |
! | GAACTCCTATGTGATTTGTA+GGG | + | chr3_3:76581662-76581681 | Msa0473850:intron | 35.0% |
! | TGTAGGGTATTTCAAAAGGA+AGG | + | chr3_3:76581678-76581697 | Msa0473850:CDS | 35.0% |
TCCCAGTCTTTCTCATTAAA+TGG | - | chr3_3:76581738-76581757 | None:intergenic | 35.0% | |
TTTCGACGATGAAAATGCAT+TGG | + | chr3_3:76581995-76582014 | Msa0473850:CDS | 35.0% | |
! | AGATCCATTGTTTTCATTCC+CGG | - | chr3_3:76582021-76582040 | None:intergenic | 35.0% |
GAATGAAAACAATGGATCTG+AGG | + | chr3_3:76582022-76582041 | Msa0473850:CDS | 35.0% | |
! | GCACTTTTAGTGTTATGCAA+GGG | + | chr3_3:76582317-76582336 | Msa0473850:intron | 35.0% |
! | TTATAGGTCATGTGGGTTTT+GGG | - | chr3_3:76582459-76582478 | None:intergenic | 35.0% |
! | TTTATAGGTCATGTGGGTTT+TGG | - | chr3_3:76582460-76582479 | None:intergenic | 35.0% |
ATATGACTACCTCCAATATC+TGG | + | chr3_3:76582694-76582713 | Msa0473850:intron | 35.0% | |
AAATGACTGTTCACCAGAAA+TGG | - | chr3_3:76582727-76582746 | None:intergenic | 35.0% | |
AAGATAACAAAGAGAAGGAG+AGG | - | chr3_3:76582773-76582792 | None:intergenic | 35.0% | |
TGCTATCTTTCATTTGCTCT+CGG | + | chr3_3:76582809-76582828 | Msa0473850:intron | 35.0% | |
AGTCTTAACAGTAGCATAAG+TGG | - | chr3_3:76582864-76582883 | None:intergenic | 35.0% | |
!! | TCATTGGTCTTAACATATGC+TGG | + | chr3_3:76582914-76582933 | Msa0473850:intron | 35.0% |
TGCAAGTGCAATTAATCAGA+AGG | - | chr3_3:76583141-76583160 | None:intergenic | 35.0% | |
TTAAATGTTCTACATGGCCT+AGG | + | chr3_3:76583191-76583210 | Msa0473850:intron | 35.0% | |
TGTCTGCTTCGTTGTTATAT+TGG | + | chr3_3:76583303-76583322 | Msa0473850:intron | 35.0% | |
CTTCGTTGTTATATTGGACT+TGG | + | chr3_3:76583309-76583328 | Msa0473850:intron | 35.0% | |
! | TTCAGCCTTCCAGTTTTTAA+TGG | - | chr3_3:76583533-76583552 | None:intergenic | 35.0% |
ATGTGATTATGTTCGACAGA+AGG | + | chr3_3:76583722-76583741 | Msa0473850:intron | 35.0% | |
AGGTCCTCAAAAATCTCATT+TGG | - | chr3_3:76583798-76583817 | None:intergenic | 35.0% | |
!! | AAATGAGATTTTTGAGGACC+TGG | + | chr3_3:76583797-76583816 | Msa0473850:CDS | 35.0% |
!! | AATGAGATTTTTGAGGACCT+GGG | + | chr3_3:76583798-76583817 | Msa0473850:CDS | 35.0% |
TATTAACAGCTTGGTTGGAT+TGG | + | chr3_3:76583824-76583843 | Msa0473850:CDS | 35.0% | |
AAGCAACTCAAAGAAATCAG+GGG | - | chr3_3:76583940-76583959 | None:intergenic | 35.0% | |
CAAGCAACTCAAAGAAATCA+GGG | - | chr3_3:76583941-76583960 | None:intergenic | 35.0% | |
TCAAGCAACTCAAAGAAATC+AGG | - | chr3_3:76583942-76583961 | None:intergenic | 35.0% | |
CCACATACAATGTCTTACAA+CGG | - | chr3_3:76584150-76584169 | None:intergenic | 35.0% | |
GCTTGATCACAGTTATTTGT+TGG | + | chr3_3:76584244-76584263 | Msa0473850:three_prime_UTR | 35.0% | |
! | AAAATTGTTGCTTGGTGGAG+GGG | - | chr3_3:76579302-76579321 | None:intergenic | 40.0% |
! | GAAAATTGTTGCTTGGTGGA+GGG | - | chr3_3:76579303-76579322 | None:intergenic | 40.0% |
ATGAAGAAGAGGAAGCTTAC+CGG | - | chr3_3:76579441-76579460 | None:intergenic | 40.0% | |
GAGAAAATGTTGAGACTGGA+AGG | - | chr3_3:76579595-76579614 | None:intergenic | 40.0% | |
AGAAGGAAGATCAAGTCCAA+TGG | - | chr3_3:76579665-76579684 | None:intergenic | 40.0% | |
! | GTTTGTTGAATTTGGGGGTT+TGG | + | chr3_3:76579827-76579846 | Msa0473850:five_prime_UTR | 40.0% |
! | TTTGGGGGTTTGGTAGTTTA+AGG | + | chr3_3:76579837-76579856 | Msa0473850:five_prime_UTR | 40.0% |
ATTACCAGCTCAACATCAGT+GGG | - | chr3_3:76579967-76579986 | None:intergenic | 40.0% | |
AGTTTCGTTGAATCCAAACC+TGG | - | chr3_3:76580081-76580100 | None:intergenic | 40.0% | |
! | TCAAGAGTGGTGATTTGCAA+TGG | + | chr3_3:76580208-76580227 | Msa0473850:CDS | 40.0% |
GAAAGAAATATTGCACGGGA+GGG | + | chr3_3:76580250-76580269 | Msa0473850:CDS | 40.0% | |
TAAAGGAGACCGAACTGATT+GGG | + | chr3_3:76580395-76580414 | Msa0473850:CDS | 40.0% | |
CATGCATAACCCAATCAGTT+CGG | - | chr3_3:76580407-76580426 | None:intergenic | 40.0% | |
ATTCAAAGATGTCGTACCTG+TGG | - | chr3_3:76580471-76580490 | None:intergenic | 40.0% | |
AGGTACGACATCTTTGAATG+AGG | + | chr3_3:76580472-76580491 | Msa0473850:intron | 40.0% | |
! | TTGGTTGCGAACTGTTTTGT+TGG | + | chr3_3:76580510-76580529 | Msa0473850:intron | 40.0% |
GATGTACGTATGGCGTTTAA+TGG | + | chr3_3:76580532-76580551 | Msa0473850:intron | 40.0% | |
TGGCTTTCACGTGTAACAAA+GGG | - | chr3_3:76580598-76580617 | None:intergenic | 40.0% | |
GGACAGTGAGAGTAATAAGA+TGG | - | chr3_3:76580785-76580804 | None:intergenic | 40.0% | |
! | TTTTTCCCAAAGGTCTGTTG+GGG | + | chr3_3:76581074-76581093 | Msa0473850:intron | 40.0% |
!! | GGAGAGGGCTTTGAAAAAAA+TGG | + | chr3_3:76581126-76581145 | Msa0473850:intron | 40.0% |
! | AAGGAATGAAGAGGTTTGGT+AGG | + | chr3_3:76581162-76581181 | Msa0473850:intron | 40.0% |
! | AGGAATGAAGAGGTTTGGTA+GGG | + | chr3_3:76581163-76581182 | Msa0473850:intron | 40.0% |
CAAATTAGGAGGGGTTTAGT+TGG | - | chr3_3:76581253-76581272 | None:intergenic | 40.0% | |
CAACTAAACCCCTCCTAATT+TGG | + | chr3_3:76581251-76581270 | Msa0473850:intron | 40.0% | |
ACTAAACCCCTCCTAATTTG+GGG | + | chr3_3:76581253-76581272 | Msa0473850:intron | 40.0% | |
TGGGGGAACTCAAATTGTAT+TGG | + | chr3_3:76581271-76581290 | Msa0473850:intron | 40.0% | |
GGGAACTCAAATTGTATTGG+AGG | + | chr3_3:76581274-76581293 | Msa0473850:intron | 40.0% | |
!!! | GTATTGGAGGAGTATTTTGG+AGG | + | chr3_3:76581287-76581306 | Msa0473850:intron | 40.0% |
!!! | AGGAGTATTTTGGAGGGTTT+TGG | + | chr3_3:76581294-76581313 | Msa0473850:intron | 40.0% |
CCCTAAAGAGGACTTGTATT+AGG | + | chr3_3:76581497-76581516 | Msa0473850:intron | 40.0% | |
CCCTAATACAAGTCCTCTTT+AGG | - | chr3_3:76581501-76581520 | None:intergenic | 40.0% | |
GTATTTCAAAAGGAAGGTCC+TGG | + | chr3_3:76581684-76581703 | Msa0473850:CDS | 40.0% | |
TCAGAAATATGGCTTGAGCT+AGG | - | chr3_3:76581831-76581850 | None:intergenic | 40.0% | |
ATCGTCGAAAATAGCAAGCA+TGG | - | chr3_3:76581985-76582004 | None:intergenic | 40.0% | |
AAGTCAGAGCTACCAAAGTT+GGG | - | chr3_3:76582105-76582124 | None:intergenic | 40.0% | |
AAAGTCAGAGCTACCAAAGT+TGG | - | chr3_3:76582106-76582125 | None:intergenic | 40.0% | |
AAAAAGAGGAACAGTTCACG+AGG | - | chr3_3:76582198-76582217 | None:intergenic | 40.0% | |
TGCTGAATTGCATGACACAT+TGG | + | chr3_3:76582295-76582314 | Msa0473850:intron | 40.0% | |
! | GGCACTTTTAGTGTTATGCA+AGG | + | chr3_3:76582316-76582335 | Msa0473850:intron | 40.0% |
ACCAATCTCATCACCAACAA+TGG | + | chr3_3:76582365-76582384 | Msa0473850:intron | 40.0% | |
AATGGAAGCTTGCCAGATAT+TGG | - | chr3_3:76582709-76582728 | None:intergenic | 40.0% | |
AGGAGAGGTTGCCAAAAATA+GGG | - | chr3_3:76582758-76582777 | None:intergenic | 40.0% | |
AAGGAGAGGTTGCCAAAAAT+AGG | - | chr3_3:76582759-76582778 | None:intergenic | 40.0% | |
GAGAGCAAATGAAAGATAGC+AGG | - | chr3_3:76582810-76582829 | None:intergenic | 40.0% | |
GGAAACTAAGACAAAAGAGG+CGG | - | chr3_3:76583014-76583033 | None:intergenic | 40.0% | |
TCCAATGTTCTAATGGCAGA+TGG | - | chr3_3:76583041-76583060 | None:intergenic | 40.0% | |
AAAAATTTGGGGGCAAGAAG+TGG | + | chr3_3:76583091-76583110 | Msa0473850:intron | 40.0% | |
ACTCACTCCAAAGTGATTAG+TGG | + | chr3_3:76583165-76583184 | Msa0473850:intron | 40.0% | |
CTCACTCCAAAGTGATTAGT+GGG | + | chr3_3:76583166-76583185 | Msa0473850:intron | 40.0% | |
TCACTCCAAAGTGATTAGTG+GGG | + | chr3_3:76583167-76583186 | Msa0473850:intron | 40.0% | |
TTAAGCCCCACTAATCACTT+TGG | - | chr3_3:76583175-76583194 | None:intergenic | 40.0% | |
TGGGGCTTAAATGTTCTACA+TGG | + | chr3_3:76583185-76583204 | Msa0473850:intron | 40.0% | |
CGTTGTTATATTGGACTTGG+TGG | + | chr3_3:76583312-76583331 | Msa0473850:intron | 40.0% | |
!! | ACTGTCTCTTTTGTTTAGGG+AGG | + | chr3_3:76583451-76583470 | Msa0473850:intron | 40.0% |
!! | CTGTCTCTTTTGTTTAGGGA+GGG | + | chr3_3:76583452-76583471 | Msa0473850:intron | 40.0% |
GGAGATATTAACAGCTTGGT+TGG | + | chr3_3:76583819-76583838 | Msa0473850:CDS | 40.0% | |
AGCAACTCAAAGAAATCAGG+GGG | - | chr3_3:76583939-76583958 | None:intergenic | 40.0% | |
TGTTTAGTCTGCCAGGATAA+TGG | - | chr3_3:76583975-76583994 | None:intergenic | 40.0% | |
TTCTGAGTTACTTGACCTAG+AGG | + | chr3_3:76584006-76584025 | Msa0473850:three_prime_UTR | 40.0% | |
TGTTTAGTCTGCCAGGATAA+TGG | - | chr3_3:76583975-76583994 | None:intergenic | 40.0% | |
CCGTTGTAAGACATTGTATG+TGG | + | chr3_3:76584147-76584166 | Msa0473850:three_prime_UTR | 40.0% | |
! | GGAAAATTGTTGCTTGGTGG+AGG | - | chr3_3:76579304-76579323 | None:intergenic | 45.0% |
AGAGTGTATGAAGCACGGAA+GGG | - | chr3_3:76579365-76579384 | None:intergenic | 45.0% | |
! | GAGAGAGAGTGTATGAAGCA+CGG | - | chr3_3:76579370-76579389 | None:intergenic | 45.0% |
ACATAAAATCGCCTCGTTCG+CGG | + | chr3_3:76579398-76579417 | Msa0473850:five_prime_UTR | 45.0% | |
AAGAAAAGTCATCGGCACAG+TGG | - | chr3_3:76579538-76579557 | None:intergenic | 45.0% | |
TTGAGACTGGAAGGCTACAA+CGG | - | chr3_3:76579586-76579605 | None:intergenic | 45.0% | |
TGAATAACAATCGTCGCAGC+AGG | + | chr3_3:76579619-76579638 | Msa0473850:five_prime_UTR | 45.0% | |
GGAATATCTTCTTCCGCCAT+TGG | + | chr3_3:76579646-76579665 | Msa0473850:five_prime_UTR | 45.0% | |
AGGAAGATCAAGTCCAATGG+CGG | - | chr3_3:76579662-76579681 | None:intergenic | 45.0% | |
! | TGACATTGCTGTTGCGCTTA+AGG | + | chr3_3:76579788-76579807 | Msa0473850:five_prime_UTR | 45.0% |
TTACCAGCTCAACATCAGTG+GGG | - | chr3_3:76579966-76579985 | None:intergenic | 45.0% | |
CATTACCAGCTCAACATCAG+TGG | - | chr3_3:76579968-76579987 | None:intergenic | 45.0% | |
TGGTACTTCTTTACCCCTGT+TGG | + | chr3_3:76580228-76580247 | Msa0473850:CDS | 45.0% | |
GGAAAGAAATATTGCACGGG+AGG | + | chr3_3:76580249-76580268 | Msa0473850:CDS | 45.0% | |
ATGAATCGGGCAACAGAAGT+AGG | + | chr3_3:76580276-76580295 | Msa0473850:CDS | 45.0% | |
TGAATCGGGCAACAGAAGTA+GGG | + | chr3_3:76580277-76580296 | Msa0473850:CDS | 45.0% | |
!! | TAGGGTACTGGAAGACTACA+GGG | + | chr3_3:76580295-76580314 | Msa0473850:CDS | 45.0% |
TTTGCCAGTGTGAAACACCA+GGG | - | chr3_3:76580370-76580389 | None:intergenic | 45.0% | |
CAATCAGTTCGGTCTCCTTT+AGG | - | chr3_3:76580396-76580415 | None:intergenic | 45.0% | |
CTAAAGGAGACCGAACTGAT+TGG | + | chr3_3:76580394-76580413 | Msa0473850:CDS | 45.0% | |
GACAAAGACCTAGCTGACAA+TGG | + | chr3_3:76580441-76580460 | Msa0473850:CDS | 45.0% | |
! | CTGGCTTTCACGTGTAACAA+AGG | - | chr3_3:76580599-76580618 | None:intergenic | 45.0% |
! | AAGCACGCACGAAGTATCTA+CGG | - | chr3_3:76580733-76580752 | None:intergenic | 45.0% |
! | CGTGCTTACATAGCATTGAG+TGG | + | chr3_3:76580746-76580765 | Msa0473850:intron | 45.0% |
! | TTTTCCCAAAGGTCTGTTGG+GGG | + | chr3_3:76581075-76581094 | Msa0473850:intron | 45.0% |
TTGGGGGCTTATGGAGTTAT+GGG | + | chr3_3:76581091-76581110 | Msa0473850:intron | 45.0% | |
AAATGGAAGGATGGAGTGGA+AGG | + | chr3_3:76581143-76581162 | Msa0473850:intron | 45.0% | |
ATGGAGTGGAAGGAATGAAG+AGG | + | chr3_3:76581153-76581172 | Msa0473850:intron | 45.0% | |
GTGGAAGGAATGAAGAGGTT+TGG | + | chr3_3:76581158-76581177 | Msa0473850:intron | 45.0% | |
! | GGAATGAAGAGGTTTGGTAG+GGG | + | chr3_3:76581164-76581183 | Msa0473850:intron | 45.0% |
CTAAACCCCTCCTAATTTGG+GGG | + | chr3_3:76581254-76581273 | Msa0473850:intron | 45.0% | |
TGAGTTCCCCCAAATTAGGA+GGG | - | chr3_3:76581263-76581282 | None:intergenic | 45.0% | |
TTGAGTTCCCCCAAATTAGG+AGG | - | chr3_3:76581264-76581283 | None:intergenic | 45.0% | |
GTCTGTTCAGATGTTTCGAG+GGG | - | chr3_3:76581478-76581497 | None:intergenic | 45.0% | |
GGTCTGTTCAGATGTTTCGA+GGG | - | chr3_3:76581479-76581498 | None:intergenic | 45.0% | |
CATCTGAACAGACCCTAAAG+AGG | + | chr3_3:76581485-76581504 | Msa0473850:intron | 45.0% | |
CCAATACATCCACTTGCAGA+GGG | - | chr3_3:76581870-76581889 | None:intergenic | 45.0% | |
TCCAATACATCCACTTGCAG+AGG | - | chr3_3:76581871-76581890 | None:intergenic | 45.0% | |
CTATCAAGATTGATGCCCTC+TGG | + | chr3_3:76581909-76581928 | Msa0473850:CDS | 45.0% | |
CTTGATTGCCTAGAGCTGAA+GGG | - | chr3_3:76581944-76581963 | None:intergenic | 45.0% | |
! | GACGATGAAAATGCATTGGC+CGG | + | chr3_3:76581999-76582018 | Msa0473850:CDS | 45.0% |
! | ACGATGAAAATGCATTGGCC+GGG | + | chr3_3:76582000-76582019 | Msa0473850:CDS | 45.0% |
TTGGCCGGGAATGAAAACAA+TGG | + | chr3_3:76582014-76582033 | Msa0473850:CDS | 45.0% | |
AGTCAGAGCTACCAAAGTTG+GGG | - | chr3_3:76582104-76582123 | None:intergenic | 45.0% | |
TTAGTGTTATGCAAGGGCCA+TGG | + | chr3_3:76582323-76582342 | Msa0473850:intron | 45.0% | |
AGCAAGAATGGTAACCACCA+TGG | - | chr3_3:76582343-76582362 | None:intergenic | 45.0% | |
TGAGATTGGTGCAGCAAGAA+TGG | - | chr3_3:76582355-76582374 | None:intergenic | 45.0% | |
!! | GCCATTGTTGGTGATGAGAT+TGG | - | chr3_3:76582369-76582388 | None:intergenic | 45.0% |
AGAAATCGGATCATGAGCCA+TGG | + | chr3_3:76582424-76582443 | Msa0473850:intron | 45.0% | |
ATCTGGCAAGCTTCCATTTC+TGG | + | chr3_3:76582711-76582730 | Msa0473850:intron | 45.0% | |
!! | TAGCATAAGTGGACTAGTGG+AGG | - | chr3_3:76582853-76582872 | None:intergenic | 45.0% |
!! | CAGTAGCATAAGTGGACTAG+TGG | - | chr3_3:76582856-76582875 | None:intergenic | 45.0% |
! | ACATATGCTGGCAGTGCTTT+TGG | + | chr3_3:76582926-76582945 | Msa0473850:intron | 45.0% |
GTTCTAATGGCAGATGGCAT+AGG | - | chr3_3:76583035-76583054 | None:intergenic | 45.0% | |
GCCATCTGCCATTAGAACAT+TGG | + | chr3_3:76583037-76583056 | Msa0473850:intron | 45.0% | |
! | TTTTCCTGCCTTCGACTAGA+AGG | - | chr3_3:76583117-76583136 | None:intergenic | 45.0% |
TTTGCACAAAAGGGGTAGCA+AGG | - | chr3_3:76583354-76583373 | None:intergenic | 45.0% | |
!! | CTTTTGTTTAGGGAGGGTGA+AGG | + | chr3_3:76583458-76583477 | Msa0473850:intron | 45.0% |
CCTCTGCCATCTTGATTAGT+AGG | - | chr3_3:76583575-76583594 | None:intergenic | 45.0% | |
CCTACTAATCAAGATGGCAG+AGG | + | chr3_3:76583572-76583591 | Msa0473850:intron | 45.0% | |
!! | CGACAGAAGGTTGATAATCC+TGG | + | chr3_3:76583735-76583754 | Msa0473850:intron | 45.0% |
CCAAGCTGTTAATATCTCCC+AGG | - | chr3_3:76583818-76583837 | None:intergenic | 45.0% | |
CCTGGGAGATATTAACAGCT+TGG | + | chr3_3:76583815-76583834 | Msa0473850:CDS | 45.0% | |
! | AGCTTGGTTGGATTGGATGA+TGG | + | chr3_3:76583831-76583850 | Msa0473850:CDS | 45.0% |
!! | GTTGGATTGGATGATGGAAG+CGG | + | chr3_3:76583837-76583856 | Msa0473850:CDS | 45.0% |
! | GATGGAAGCGGTTTTTCCTA+TGG | + | chr3_3:76583849-76583868 | Msa0473850:CDS | 45.0% |
GCAACTCAAAGAAATCAGGG+GGG | - | chr3_3:76583938-76583957 | None:intergenic | 45.0% | |
!! | CTTTGAGTTGCTTGACCTAG+AGG | + | chr3_3:76583947-76583966 | Msa0473850:CDS | 45.0% |
TCCTGGCAGACTAAACATGA+TGG | + | chr3_3:76583978-76583997 | Msa0473850:CDS | 45.0% | |
TCCTGGCAGACTAAACATGA+TGG | + | chr3_3:76583978-76583997 | Msa0473850:CDS | 45.0% | |
TCCATCATGTTTAGTCTGCC+AGG | - | chr3_3:76584041-76584060 | None:intergenic | 45.0% | |
!! | AATTATTATTAGTATTAATA+AGG | + | chr3_3:76580985-76581004 | Msa0473850:intron | 5.0% |
!! | ATTATTATTAGTATTAATAA+GGG | + | chr3_3:76580986-76581005 | Msa0473850:intron | 5.0% |
!!! | ATATTTTTGTTAAAAAAATT+TGG | + | chr3_3:76583078-76583097 | Msa0473850:intron | 5.0% |
!!! | TATTTTTGTTAAAAAAATTT+GGG | + | chr3_3:76583079-76583098 | Msa0473850:intron | 5.0% |
TCTTCCGGTGAGTGAGTAAG+AGG | - | chr3_3:76579268-76579287 | None:intergenic | 50.0% | |
! | GAGAGTGTATGAAGCACGGA+AGG | - | chr3_3:76579366-76579385 | None:intergenic | 50.0% |
GGTGCTTTCTCATCCTTCTC+CGG | + | chr3_3:76579419-76579438 | Msa0473850:five_prime_UTR | 50.0% | |
AAGAGGAAGCTTACCGGAGA+AGG | - | chr3_3:76579435-76579454 | None:intergenic | 50.0% | |
GAGCGATTGGGGAAAATGCA+TGG | - | chr3_3:76579476-76579495 | None:intergenic | 50.0% | |
! | GCTACAACGGATGGTGATGA+TGG | - | chr3_3:76579573-76579592 | None:intergenic | 50.0% |
TATGCTCCATGGGATCTACC+AGG | + | chr3_3:76580060-76580079 | Msa0473850:CDS | 50.0% | |
TCCATGGGATCTACCAGGTT+TGG | + | chr3_3:76580065-76580084 | Msa0473850:intron | 50.0% | |
TCCAAACCTGGTAGATCCCA+TGG | - | chr3_3:76580069-76580088 | None:intergenic | 50.0% | |
AGAAATATTGCACGGGAGGG+AGG | + | chr3_3:76580253-76580272 | Msa0473850:CDS | 50.0% | |
!! | GTAGGGTACTGGAAGACTAC+AGG | + | chr3_3:76580294-76580313 | Msa0473850:CDS | 50.0% |
GTACTGGAAGACTACAGGGA+AGG | + | chr3_3:76580299-76580318 | Msa0473850:CDS | 50.0% | |
GGAAGACTACAGGGAAGGAT+AGG | + | chr3_3:76580304-76580323 | Msa0473850:CDS | 50.0% | |
AGAACCCTGGTGTTTCACAC+TGG | + | chr3_3:76580363-76580382 | Msa0473850:CDS | 50.0% | |
CTTTGCCAGTGTGAAACACC+AGG | - | chr3_3:76580371-76580390 | None:intergenic | 50.0% | |
CACACTGGCAAAGCTCCTAA+AGG | + | chr3_3:76580378-76580397 | Msa0473850:CDS | 50.0% | |
GTGGAACACCATTGTCAGCT+AGG | - | chr3_3:76580452-76580471 | None:intergenic | 50.0% | |
AGCTGACAATGGTGTTCCAC+AGG | + | chr3_3:76580452-76580471 | Msa0473850:CDS | 50.0% | |
TAAGCCCCCAACAGACCTTT+GGG | - | chr3_3:76581082-76581101 | None:intergenic | 50.0% | |
ATAAGCCCCCAACAGACCTT+TGG | - | chr3_3:76581083-76581102 | None:intergenic | 50.0% | |
AAAGGTCTGTTGGGGGCTTA+TGG | + | chr3_3:76581082-76581101 | Msa0473850:intron | 50.0% | |
GTTGGGGGCTTATGGAGTTA+TGG | + | chr3_3:76581090-76581109 | Msa0473850:intron | 50.0% | |
TGGGGGCTTATGGAGTTATG+GGG | + | chr3_3:76581092-76581111 | Msa0473850:intron | 50.0% | |
GCTTATGGAGTTATGGGGGA+GGG | + | chr3_3:76581097-76581116 | Msa0473850:intron | 50.0% | |
CTTATGGAGTTATGGGGGAG+GGG | + | chr3_3:76581098-76581117 | Msa0473850:intron | 50.0% | |
! | ATGAAGAGGTTTGGTAGGGG+AGG | + | chr3_3:76581167-76581186 | Msa0473850:intron | 50.0% |
! | TGAAGAGGTTTGGTAGGGGA+GGG | + | chr3_3:76581168-76581187 | Msa0473850:intron | 50.0% |
GAGGGGTTTAGTTGGTCCTT+GGG | - | chr3_3:76581245-76581264 | None:intergenic | 50.0% | |
GAGTTCCCCCAAATTAGGAG+GGG | - | chr3_3:76581262-76581281 | None:intergenic | 50.0% | |
TTCAGATGTTTCGAGGGGAG+AGG | - | chr3_3:76581473-76581492 | None:intergenic | 50.0% | |
GGGTCTGTTCAGATGTTTCG+AGG | - | chr3_3:76581480-76581499 | None:intergenic | 50.0% | |
CCATACTGTGCACCATTCCT+GGG | - | chr3_3:76581711-76581730 | None:intergenic | 50.0% | |
TCCATACTGTGCACCATTCC+TGG | - | chr3_3:76581712-76581731 | None:intergenic | 50.0% | |
GAAAGACTGGGATAGCGAAG+AGG | + | chr3_3:76581746-76581765 | Msa0473850:CDS | 50.0% | |
GAGCTAGGTAGAATGAGAGC+TGG | - | chr3_3:76581816-76581835 | None:intergenic | 50.0% | |
CCCTCTGCAAGTGGATGTAT+TGG | + | chr3_3:76581867-76581886 | Msa0473850:CDS | 50.0% | |
GCTTGATTGCCTAGAGCTGA+AGG | - | chr3_3:76581945-76581964 | None:intergenic | 50.0% | |
!! | TACCAAAGTTGGGGAGCATC+TGG | - | chr3_3:76582095-76582114 | None:intergenic | 50.0% |
CTCATCACCAACAATGGCGA+TGG | + | chr3_3:76582371-76582390 | Msa0473850:intron | 50.0% | |
CAATCTGCCATCGCCATTGT+TGG | - | chr3_3:76582381-76582400 | None:intergenic | 50.0% | |
!! | GTTTTGGGTCTGTCTAGCCA+TGG | - | chr3_3:76582444-76582463 | None:intergenic | 50.0% |
GGAAGCTTGCCAGATATTGG+AGG | - | chr3_3:76582706-76582725 | None:intergenic | 50.0% | |
AGAAGTGGCCTTCTAGTCGA+AGG | + | chr3_3:76583106-76583125 | Msa0473850:intron | 50.0% | |
!! | ACCTAGAGGTGCCATTATCC+TGG | + | chr3_3:76583961-76583980 | Msa0473850:CDS | 50.0% |
GCCATCATGTTTAGTCTGCC+AGG | - | chr3_3:76583982-76584001 | None:intergenic | 50.0% | |
!! | ACCTAGAGGTGCCATTATCC+TGG | + | chr3_3:76583961-76583980 | Msa0473850:CDS | 50.0% |
TCCGGTGAGTGAGTAAGAGG+TGG | - | chr3_3:76579265-76579284 | None:intergenic | 55.0% | |
GGGGTTGCTTCTCTCTCTTC+CGG | - | chr3_3:76579283-76579302 | None:intergenic | 55.0% | |
!! | ATGAGAAAGCACCGCGAACG+AGG | - | chr3_3:76579412-76579431 | None:intergenic | 55.0% |
GACTGGAAGGCTACAACGGA+TGG | - | chr3_3:76579582-76579601 | None:intergenic | 55.0% | |
ACAATCGTCGCAGCAGGCTT+TGG | + | chr3_3:76579625-76579644 | Msa0473850:five_prime_UTR | 55.0% | |
GTGGGGTGAAAACGAAACCC+TGG | - | chr3_3:76579949-76579968 | None:intergenic | 55.0% | |
TCACCCCACTGATGTTGAGC+TGG | + | chr3_3:76579960-76579979 | Msa0473850:CDS | 55.0% | |
GGGCAACAGAAGTAGGGTAC+TGG | + | chr3_3:76580283-76580302 | Msa0473850:CDS | 55.0% | |
GGTGGGGATGATAAGAACCC+TGG | + | chr3_3:76580350-76580369 | Msa0473850:CDS | 55.0% | |
GGGGGCTTATGGAGTTATGG+GGG | + | chr3_3:76581093-76581112 | Msa0473850:intron | 55.0% | |
GGCTTATGGAGTTATGGGGG+AGG | + | chr3_3:76581096-76581115 | Msa0473850:intron | 55.0% | |
GTTTGGTAGGGGAGGGCTTT+GGG | + | chr3_3:76581175-76581194 | Msa0473850:intron | 55.0% | |
TTTGGTAGGGGAGGGCTTTG+GGG | + | chr3_3:76581176-76581195 | Msa0473850:intron | 55.0% | |
GAAACTTGGTATCCGGCCCA+AGG | + | chr3_3:76581226-76581245 | Msa0473850:intron | 55.0% | |
GGTTTAGTTGGTCCTTGGGC+CGG | - | chr3_3:76581241-76581260 | None:intergenic | 55.0% | |
GGAGGGGTTTAGTTGGTCCT+TGG | - | chr3_3:76581246-76581265 | None:intergenic | 55.0% | |
GATGTTTCGAGGGGAGAGGA+TGG | - | chr3_3:76581469-76581488 | None:intergenic | 55.0% | |
AAAAGGAAGGTCCTGGTCCC+AGG | + | chr3_3:76581691-76581710 | Msa0473850:CDS | 55.0% | |
CCCAGGAATGGTGCACAGTA+TGG | + | chr3_3:76581708-76581727 | Msa0473850:CDS | 55.0% | |
GTGCAGACACAGCAGCAACA+GGG | - | chr3_3:76581794-76581813 | None:intergenic | 55.0% | |
GACATGCATCCCTCTGCAAG+TGG | + | chr3_3:76581858-76581877 | Msa0473850:CDS | 55.0% | |
ACGACACACCCTTCAGCTCT+AGG | + | chr3_3:76581933-76581952 | Msa0473850:CDS | 55.0% | |
TGCCAGATGCTCCCCAACTT+TGG | + | chr3_3:76582090-76582109 | Msa0473850:intron | 55.0% | |
GTGTTATGCAAGGGCCATGG+TGG | + | chr3_3:76582326-76582345 | Msa0473850:intron | 55.0% | |
! | GCCAGGATAATGGCACCTCT+AGG | - | chr3_3:76583965-76583984 | None:intergenic | 55.0% |
! | GCCAGGATAATGGCACCTCT+AGG | - | chr3_3:76583965-76583984 | None:intergenic | 55.0% |
GCACGGGAGGGAGGATGAAT+CGG | + | chr3_3:76580262-76580281 | Msa0473850:CDS | 60.0% | |
CACGGGAGGGAGGATGAATC+GGG | + | chr3_3:76580263-76580282 | Msa0473850:CDS | 60.0% | |
AGTTATGGGGGAGGGGAGAG+AGG | + | chr3_3:76581105-76581124 | Msa0473850:intron | 60.0% | |
! | GGTTTGGTAGGGGAGGGCTT+TGG | + | chr3_3:76581174-76581193 | Msa0473850:intron | 60.0% |
!! | GAGAGGATGGCTTTGGGAGC+AGG | - | chr3_3:76581456-76581475 | None:intergenic | 60.0% |
CGAGGGGAGAGGATGGCTTT+GGG | - | chr3_3:76581462-76581481 | None:intergenic | 60.0% | |
TCGAGGGGAGAGGATGGCTT+TGG | - | chr3_3:76581463-76581482 | None:intergenic | 60.0% | |
GAAGGTCCTGGTCCCAGGAA+TGG | + | chr3_3:76581696-76581715 | Msa0473850:CDS | 60.0% | |
TGTGCACCATTCCTGGGACC+AGG | - | chr3_3:76581705-76581724 | None:intergenic | 60.0% | |
GGTGCAGACACAGCAGCAAC+AGG | - | chr3_3:76581795-76581814 | None:intergenic | 60.0% | |
! | GAAGGGTGTGTCGTGCCAGA+GGG | - | chr3_3:76581927-76581946 | None:intergenic | 60.0% |
! | TGAAGGGTGTGTCGTGCCAG+AGG | - | chr3_3:76581928-76581947 | None:intergenic | 60.0% |
GTGGCCTTCTAGTCGAAGGC+AGG | + | chr3_3:76583110-76583129 | Msa0473850:intron | 60.0% | |
TGGGGGAGGGGAGAGAGGAG+AGG | + | chr3_3:76581110-76581129 | Msa0473850:intron | 70.0% | |
GGGGGAGGGGAGAGAGGAGA+GGG | + | chr3_3:76581111-76581130 | Msa0473850:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_3 | gene | 76579262 | 76584281 | 76579262 | ID=Msa0473850;Name=Msa0473850 |
chr3_3 | mRNA | 76579262 | 76584281 | 76579262 | ID=Msa0473850-mRNA-1;Parent=Msa0473850;Name=Msa0473850-mRNA-1;_AED=0.04;_eAED=0.04;_QI=570|1|1|1|0.75|0.6|5|277|360 |
chr3_3 | exon | 76579262 | 76579440 | 76579262 | ID=Msa0473850-mRNA-1:exon:20104;Parent=Msa0473850-mRNA-1 |
chr3_3 | exon | 76579531 | 76580081 | 76579531 | ID=Msa0473850-mRNA-1:exon:20105;Parent=Msa0473850-mRNA-1 |
chr3_3 | exon | 76580196 | 76580473 | 76580196 | ID=Msa0473850-mRNA-1:exon:20106;Parent=Msa0473850-mRNA-1 |
chr3_3 | exon | 76581663 | 76582043 | 76581663 | ID=Msa0473850-mRNA-1:exon:20107;Parent=Msa0473850-mRNA-1 |
chr3_3 | exon | 76583741 | 76584281 | 76583741 | ID=Msa0473850-mRNA-1:exon:20108;Parent=Msa0473850-mRNA-1 |
chr3_3 | five_prime_UTR | 76579262 | 76579440 | 76579262 | ID=Msa0473850-mRNA-1:five_prime_utr;Parent=Msa0473850-mRNA-1 |
chr3_3 | five_prime_UTR | 76579531 | 76579921 | 76579531 | ID=Msa0473850-mRNA-1:five_prime_utr;Parent=Msa0473850-mRNA-1 |
chr3_3 | CDS | 76579922 | 76580081 | 76579922 | ID=Msa0473850-mRNA-1:cds;Parent=Msa0473850-mRNA-1 |
chr3_3 | CDS | 76580196 | 76580473 | 76580196 | ID=Msa0473850-mRNA-1:cds;Parent=Msa0473850-mRNA-1 |
chr3_3 | CDS | 76581663 | 76582043 | 76581663 | ID=Msa0473850-mRNA-1:cds;Parent=Msa0473850-mRNA-1 |
chr3_3 | CDS | 76583741 | 76584004 | 76583741 | ID=Msa0473850-mRNA-1:cds;Parent=Msa0473850-mRNA-1 |
chr3_3 | three_prime_UTR | 76584005 | 76584281 | 76584005 | ID=Msa0473850-mRNA-1:three_prime_utr;Parent=Msa0473850-mRNA-1 |
Gene Sequence |
Protein sequence |