Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0377860 | XP_003602603.1 | 92.500 | 360 | 24 | 1 | 1 | 360 | 1 | 357 | 0.0 | 689 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0377860 | sp|Q9FY82|NAC82_ARATH | 47.866 | 328 | 135 | 10 | 1 | 305 | 1 | 315 | 1.42e-89 | 280 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0377860 | G7JBJ4 | 92.500 | 360 | 24 | 1 | 1 | 360 | 1 | 357 | 0.0 | 689 |
Gene ID | Type | Classification |
---|---|---|
Msa0377860 | TF | NAC |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0014410 | Msa0377860 | -0.808120 | 3.620893e-50 | -8.615850e-47 |
Msa0154270 | Msa0377860 | -0.814291 | 1.659913e-51 | -8.615850e-47 |
Msa0377860 | Msa0377930 | 0.992091 | 2.993611e-191 | -8.615850e-47 |
Msa0377860 | Msa0473850 | 0.952535 | 1.965444e-110 | -8.615850e-47 |
Msa0377860 | Msa0518090 | 0.934478 | 3.795669e-96 | -8.615850e-47 |
Msa0377860 | Msa0629440 | 0.802425 | 5.644235e-49 | -8.615850e-47 |
Msa0377860 | Msa0667070 | 0.811513 | 6.741616e-51 | -8.615850e-47 |
Msa0377860 | Msa1204600 | 0.812099 | 5.026755e-51 | -8.615850e-47 |
Msa0377860 | Msa1241820 | -0.808686 | 2.741605e-50 | -8.615850e-47 |
Msa0377860 | Msa1313050 | -0.819337 | 1.224495e-52 | -8.615850e-47 |
Msa0377860 | Msa1329580 | 0.803085 | 4.124507e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0377860 | MtrunA17_Chr3g0130101 | 92.500 | 360 | 24 | 1 | 1 | 360 | 1 | 357 | 0.0 | 689 |
Msa0377860 | MtrunA17_Chr8g0364791 | 65.106 | 235 | 76 | 3 | 1 | 235 | 1 | 229 | 3.51e-106 | 318 |
Msa0377860 | MtrunA17_Chr8g0384201 | 64.255 | 235 | 78 | 3 | 1 | 235 | 1 | 229 | 1.08e-105 | 319 |
Msa0377860 | MtrunA17_Chr3g0092671 | 57.143 | 175 | 73 | 2 | 9 | 182 | 7 | 180 | 1.92e-68 | 224 |
Msa0377860 | MtrunA17_Chr1g0201021 | 50.754 | 199 | 93 | 1 | 1 | 194 | 13 | 211 | 4.42e-68 | 224 |
Msa0377860 | MtrunA17_Chr1g0197361 | 54.872 | 195 | 80 | 4 | 9 | 201 | 10 | 198 | 7.57e-68 | 224 |
Msa0377860 | MtrunA17_Chr1g0197351 | 56.742 | 178 | 70 | 2 | 7 | 178 | 42 | 218 | 2.75e-63 | 209 |
Msa0377860 | MtrunA17_Chr6g0481091 | 57.616 | 151 | 64 | 0 | 9 | 159 | 8 | 158 | 7.10e-61 | 195 |
Msa0377860 | MtrunA17_Chr3g0109821 | 55.215 | 163 | 69 | 3 | 9 | 168 | 8 | 169 | 7.67e-57 | 196 |
Msa0377860 | MtrunA17_Chr5g0433781 | 53.704 | 162 | 74 | 1 | 9 | 169 | 8 | 169 | 7.76e-57 | 195 |
Msa0377860 | MtrunA17_Chr2g0309891 | 55.333 | 150 | 66 | 1 | 9 | 157 | 8 | 157 | 4.25e-56 | 186 |
Msa0377860 | MtrunA17_Chr4g0060931 | 51.592 | 157 | 72 | 2 | 9 | 163 | 19 | 173 | 1.52e-50 | 172 |
Msa0377860 | MtrunA17_Chr5g0428991 | 39.453 | 256 | 144 | 5 | 10 | 259 | 28 | 278 | 2.79e-50 | 177 |
Msa0377860 | MtrunA17_Chr4g0018391 | 51.656 | 151 | 68 | 3 | 9 | 157 | 9 | 156 | 4.57e-50 | 171 |
Msa0377860 | MtrunA17_Chr3g0128151 | 43.961 | 207 | 96 | 3 | 10 | 209 | 25 | 218 | 5.96e-50 | 176 |
Msa0377860 | MtrunA17_Chr2g0309331 | 51.974 | 152 | 69 | 3 | 9 | 158 | 12 | 161 | 1.23e-49 | 169 |
Msa0377860 | MtrunA17_Chr1g0200561 | 49.686 | 159 | 75 | 3 | 9 | 165 | 21 | 176 | 1.61e-49 | 169 |
Msa0377860 | MtrunA17_Chr3g0091921 | 51.250 | 160 | 74 | 2 | 6 | 163 | 15 | 172 | 2.09e-49 | 168 |
Msa0377860 | MtrunA17_Chr8g0372121 | 41.346 | 208 | 109 | 5 | 9 | 214 | 8 | 204 | 3.90e-49 | 167 |
Msa0377860 | MtrunA17_Chr5g0400461 | 46.286 | 175 | 84 | 2 | 9 | 176 | 8 | 179 | 5.52e-49 | 167 |
Msa0377860 | MtrunA17_Chr3g0124761 | 49.383 | 162 | 76 | 3 | 1 | 159 | 1 | 159 | 5.70e-49 | 166 |
Msa0377860 | MtrunA17_Chr2g0316971 | 53.165 | 158 | 66 | 4 | 9 | 161 | 25 | 179 | 2.64e-48 | 167 |
Msa0377860 | MtrunA17_Chr4g0054791 | 39.474 | 228 | 114 | 4 | 9 | 212 | 8 | 235 | 3.02e-48 | 165 |
Msa0377860 | MtrunA17_Chr5g0405211 | 49.669 | 151 | 71 | 3 | 9 | 157 | 10 | 157 | 4.40e-48 | 166 |
Msa0377860 | MtrunA17_Chr3g0128111 | 48.000 | 150 | 78 | 0 | 8 | 157 | 43 | 192 | 4.94e-48 | 162 |
Msa0377860 | MtrunA17_Chr6g0484441 | 51.678 | 149 | 68 | 2 | 9 | 157 | 7 | 151 | 6.81e-48 | 164 |
Msa0377860 | MtrunA17_Chr4g0017921 | 50.331 | 151 | 71 | 2 | 9 | 158 | 10 | 157 | 9.27e-48 | 165 |
Msa0377860 | MtrunA17_Chr2g0318081 | 47.651 | 149 | 76 | 1 | 9 | 157 | 18 | 164 | 1.11e-47 | 165 |
Msa0377860 | MtrunA17_Chr4g0056541 | 50.993 | 151 | 69 | 3 | 9 | 157 | 9 | 156 | 1.61e-47 | 164 |
Msa0377860 | MtrunA17_Chr7g0252971 | 45.062 | 162 | 74 | 3 | 9 | 157 | 10 | 169 | 4.77e-47 | 162 |
Msa0377860 | MtrunA17_Chr7g0253011 | 51.282 | 156 | 66 | 4 | 9 | 157 | 19 | 171 | 5.70e-47 | 164 |
Msa0377860 | MtrunA17_Chr6g0453451 | 46.154 | 169 | 83 | 3 | 9 | 173 | 22 | 186 | 1.47e-46 | 161 |
Msa0377860 | MtrunA17_Chr8g0361731 | 45.732 | 164 | 76 | 4 | 5 | 157 | 12 | 173 | 1.67e-45 | 160 |
Msa0377860 | MtrunA17_Chr7g0263931 | 36.522 | 230 | 119 | 6 | 9 | 225 | 13 | 228 | 3.82e-45 | 157 |
Msa0377860 | MtrunA17_Chr3g0139331 | 48.408 | 157 | 75 | 3 | 9 | 163 | 13 | 165 | 4.65e-45 | 157 |
Msa0377860 | MtrunA17_Chr6g0453131 | 45.963 | 161 | 75 | 4 | 7 | 157 | 15 | 173 | 6.77e-45 | 158 |
Msa0377860 | MtrunA17_Chr5g0417791 | 47.403 | 154 | 75 | 2 | 9 | 158 | 5 | 156 | 1.68e-44 | 154 |
Msa0377860 | MtrunA17_Chr2g0318101 | 45.062 | 162 | 74 | 4 | 9 | 157 | 17 | 176 | 3.17e-44 | 155 |
Msa0377860 | MtrunA17_Chr4g0076731 | 45.570 | 158 | 81 | 3 | 3 | 159 | 50 | 203 | 4.89e-44 | 157 |
Msa0377860 | MtrunA17_Chr5g0398971 | 46.405 | 153 | 75 | 5 | 9 | 157 | 9 | 158 | 6.55e-44 | 155 |
Msa0377860 | MtrunA17_Chr7g0217721 | 43.503 | 177 | 82 | 4 | 10 | 170 | 22 | 196 | 8.83e-44 | 154 |
Msa0377860 | MtrunA17_Chr4g0042561 | 44.586 | 157 | 81 | 3 | 9 | 161 | 11 | 165 | 1.38e-43 | 152 |
Msa0377860 | MtrunA17_Chr5g0417001 | 44.172 | 163 | 79 | 4 | 5 | 157 | 12 | 172 | 2.41e-43 | 154 |
Msa0377860 | MtrunA17_Chr8g0359921 | 47.020 | 151 | 76 | 2 | 9 | 157 | 16 | 164 | 2.64e-43 | 152 |
Msa0377860 | MtrunA17_Chr7g0214071 | 47.561 | 164 | 71 | 5 | 9 | 167 | 17 | 170 | 4.03e-43 | 150 |
Msa0377860 | MtrunA17_Chr4g0047841 | 43.182 | 176 | 73 | 4 | 7 | 157 | 15 | 188 | 6.53e-43 | 152 |
Msa0377860 | MtrunA17_Chr2g0326361 | 47.097 | 155 | 74 | 4 | 9 | 157 | 16 | 168 | 7.36e-43 | 151 |
Msa0377860 | MtrunA17_Chr4g0038751 | 45.000 | 160 | 78 | 4 | 1 | 157 | 9 | 161 | 1.38e-42 | 150 |
Msa0377860 | MtrunA17_Chr8g0384721 | 45.806 | 155 | 77 | 3 | 9 | 159 | 9 | 160 | 1.93e-42 | 149 |
Msa0377860 | MtrunA17_Chr8g0346001 | 43.125 | 160 | 81 | 2 | 9 | 158 | 17 | 176 | 2.90e-42 | 152 |
Msa0377860 | MtrunA17_Chr6g0461661 | 46.405 | 153 | 74 | 4 | 10 | 157 | 21 | 170 | 3.04e-42 | 151 |
Msa0377860 | MtrunA17_Chr1g0147421 | 48.052 | 154 | 73 | 4 | 9 | 159 | 29 | 178 | 9.93e-42 | 149 |
Msa0377860 | MtrunA17_Chr3g0130731 | 46.104 | 154 | 77 | 3 | 9 | 159 | 9 | 159 | 1.53e-41 | 147 |
Msa0377860 | MtrunA17_Chr2g0312321 | 47.531 | 162 | 71 | 5 | 1 | 157 | 6 | 158 | 2.25e-41 | 147 |
Msa0377860 | MtrunA17_Chr7g0217711 | 48.889 | 135 | 67 | 1 | 10 | 144 | 22 | 154 | 6.54e-40 | 139 |
Msa0377860 | MtrunA17_Chr1g0183741 | 45.033 | 151 | 75 | 3 | 9 | 157 | 12 | 156 | 1.58e-39 | 141 |
Msa0377860 | MtrunA17_Chr7g0261411 | 44.667 | 150 | 75 | 3 | 9 | 156 | 12 | 155 | 9.89e-38 | 137 |
Msa0377860 | MtrunA17_Chr5g0442771 | 40.719 | 167 | 85 | 3 | 3 | 157 | 14 | 178 | 1.37e-37 | 137 |
Msa0377860 | MtrunA17_Chr8g0345671 | 47.297 | 148 | 69 | 5 | 10 | 154 | 14 | 155 | 1.74e-37 | 139 |
Msa0377860 | MtrunA17_Chr2g0311651 | 41.212 | 165 | 81 | 3 | 8 | 157 | 23 | 186 | 3.20e-37 | 136 |
Msa0377860 | MtrunA17_Chr2g0321741 | 46.875 | 128 | 60 | 2 | 27 | 154 | 12 | 131 | 4.50e-37 | 137 |
Msa0377860 | MtrunA17_Chr8g0385991 | 41.071 | 168 | 84 | 4 | 9 | 169 | 16 | 175 | 5.98e-37 | 133 |
Msa0377860 | MtrunA17_Chr8g0345691 | 43.919 | 148 | 74 | 5 | 10 | 154 | 15 | 156 | 6.72e-36 | 135 |
Msa0377860 | MtrunA17_Chr3g0144271 | 44.295 | 149 | 71 | 5 | 9 | 154 | 25 | 164 | 1.08e-35 | 134 |
Msa0377860 | MtrunA17_Chr2g0311661 | 40.606 | 165 | 82 | 4 | 8 | 157 | 22 | 185 | 3.08e-35 | 130 |
Msa0377860 | MtrunA17_Chr3g0131911 | 40.719 | 167 | 85 | 3 | 9 | 165 | 16 | 178 | 2.59e-34 | 126 |
Msa0377860 | MtrunA17_Chr8g0345711 | 46.825 | 126 | 63 | 3 | 10 | 132 | 15 | 139 | 1.04e-33 | 122 |
Msa0377860 | MtrunA17_Chr4g0026141 | 38.217 | 157 | 90 | 5 | 6 | 155 | 4 | 160 | 3.59e-30 | 116 |
Msa0377860 | MtrunA17_Chr2g0321631 | 39.355 | 155 | 86 | 6 | 9 | 155 | 6 | 160 | 3.88e-30 | 115 |
Msa0377860 | MtrunA17_Chr8g0345741 | 42.857 | 140 | 71 | 5 | 20 | 156 | 4 | 137 | 1.16e-29 | 111 |
Msa0377860 | MtrunA17_Chr3g0113001 | 44.167 | 120 | 64 | 1 | 57 | 173 | 13 | 132 | 2.23e-29 | 115 |
Msa0377860 | MtrunA17_Chr7g0266701 | 33.036 | 224 | 127 | 9 | 7 | 211 | 4 | 223 | 2.95e-29 | 113 |
Msa0377860 | MtrunA17_Chr8g0345731 | 41.722 | 151 | 78 | 6 | 10 | 154 | 27 | 173 | 1.59e-28 | 109 |
Msa0377860 | MtrunA17_Chr8g0345721 | 38.272 | 162 | 64 | 5 | 10 | 136 | 38 | 198 | 3.48e-27 | 106 |
Msa0377860 | MtrunA17_Chr4g0050701 | 38.125 | 160 | 77 | 6 | 9 | 158 | 13 | 160 | 1.10e-26 | 104 |
Msa0377860 | MtrunA17_Chr8g0345701 | 43.243 | 148 | 63 | 6 | 3 | 132 | 2 | 146 | 1.27e-26 | 104 |
Msa0377860 | MtrunA17_Chr3g0113031 | 45.631 | 103 | 51 | 2 | 73 | 170 | 4 | 106 | 1.12e-25 | 104 |
Msa0377860 | MtrunA17_Chr8g0384351 | 36.250 | 160 | 76 | 7 | 9 | 166 | 12 | 147 | 2.54e-20 | 87.4 |
Msa0377860 | MtrunA17_Chr3g0130321 | 33.516 | 182 | 98 | 8 | 1 | 168 | 1 | 173 | 4.38e-19 | 84.7 |
Msa0377860 | MtrunA17_Chr7g0243371 | 48.750 | 80 | 39 | 1 | 57 | 134 | 12 | 91 | 4.45e-19 | 82.0 |
Msa0377860 | MtrunA17_Chr7g0251651 | 29.851 | 134 | 89 | 4 | 1 | 132 | 11 | 141 | 2.46e-14 | 70.9 |
Msa0377860 | MtrunA17_Chr7g0251661 | 29.839 | 124 | 83 | 3 | 10 | 132 | 13 | 133 | 3.41e-13 | 66.6 |
Msa0377860 | MtrunA17_Chr1g0194791 | 60.870 | 46 | 17 | 1 | 9 | 53 | 48 | 93 | 4.78e-13 | 64.7 |
Msa0377860 | MtrunA17_Chr7g0274971 | 34.194 | 155 | 84 | 10 | 13 | 157 | 11 | 157 | 1.27e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0377860 | AT5G09330.5 | 47.866 | 328 | 135 | 10 | 1 | 305 | 1 | 315 | 1.45e-90 | 280 |
Msa0377860 | AT5G09330.2 | 47.866 | 328 | 135 | 10 | 1 | 305 | 1 | 315 | 1.45e-90 | 280 |
Msa0377860 | AT5G09330.4 | 47.866 | 328 | 135 | 10 | 1 | 305 | 1 | 315 | 1.45e-90 | 280 |
Msa0377860 | AT5G09330.3 | 47.866 | 328 | 135 | 10 | 1 | 305 | 1 | 315 | 1.45e-90 | 280 |
Msa0377860 | AT5G09330.1 | 47.866 | 328 | 135 | 10 | 1 | 305 | 1 | 315 | 1.45e-90 | 280 |
Msa0377860 | AT5G64060.1 | 55.042 | 238 | 99 | 3 | 1 | 238 | 1 | 230 | 6.19e-88 | 269 |
Msa0377860 | AT5G04410.1 | 61.538 | 182 | 69 | 1 | 7 | 188 | 9 | 189 | 1.01e-78 | 252 |
Msa0377860 | AT3G10500.1 | 63.253 | 166 | 61 | 0 | 7 | 172 | 9 | 174 | 1.94e-74 | 240 |
Msa0377860 | AT1G34190.1 | 47.867 | 211 | 109 | 1 | 5 | 215 | 14 | 223 | 1.15e-67 | 223 |
Msa0377860 | AT3G10480.2 | 56.725 | 171 | 73 | 1 | 7 | 177 | 27 | 196 | 8.12e-65 | 212 |
Msa0377860 | AT3G10480.1 | 56.977 | 172 | 72 | 2 | 7 | 177 | 27 | 197 | 1.36e-64 | 212 |
Msa0377860 | AT3G10490.1 | 55.114 | 176 | 77 | 2 | 7 | 181 | 27 | 201 | 3.41e-64 | 204 |
Msa0377860 | AT3G10490.2 | 55.114 | 176 | 77 | 2 | 7 | 181 | 27 | 201 | 5.05e-63 | 208 |
Msa0377860 | AT1G34180.3 | 50.267 | 187 | 92 | 1 | 5 | 190 | 14 | 200 | 1.27e-62 | 207 |
Msa0377860 | AT1G34180.1 | 50.267 | 187 | 92 | 1 | 5 | 190 | 14 | 200 | 1.07e-61 | 207 |
Msa0377860 | AT3G17730.1 | 58.278 | 151 | 63 | 0 | 9 | 159 | 8 | 158 | 2.42e-60 | 194 |
Msa0377860 | AT1G34180.4 | 47.236 | 199 | 92 | 2 | 5 | 190 | 14 | 212 | 1.96e-59 | 199 |
Msa0377860 | AT3G10480.3 | 48.293 | 205 | 71 | 3 | 7 | 177 | 27 | 230 | 3.33e-59 | 200 |
Msa0377860 | AT1G65910.1 | 52.273 | 176 | 83 | 1 | 7 | 181 | 6 | 181 | 1.21e-58 | 200 |
Msa0377860 | AT1G34180.2 | 47.236 | 199 | 92 | 2 | 5 | 190 | 14 | 212 | 1.33e-58 | 199 |
Msa0377860 | AT1G33060.1 | 54.054 | 148 | 68 | 0 | 10 | 157 | 27 | 174 | 1.62e-54 | 189 |
Msa0377860 | AT1G33060.2 | 54.054 | 148 | 68 | 0 | 10 | 157 | 27 | 174 | 1.72e-54 | 189 |
Msa0377860 | AT3G03200.1 | 55.333 | 150 | 66 | 1 | 9 | 157 | 8 | 157 | 6.40e-54 | 185 |
Msa0377860 | AT5G24590.2 | 46.860 | 207 | 92 | 5 | 10 | 215 | 16 | 205 | 1.05e-53 | 183 |
Msa0377860 | AT5G17260.1 | 52.667 | 150 | 70 | 1 | 9 | 157 | 8 | 157 | 8.54e-53 | 182 |
Msa0377860 | AT2G27300.1 | 53.378 | 148 | 61 | 2 | 7 | 154 | 14 | 153 | 1.25e-52 | 177 |
Msa0377860 | AT3G49530.2 | 51.333 | 150 | 72 | 1 | 10 | 158 | 16 | 165 | 3.53e-51 | 176 |
Msa0377860 | AT1G54330.1 | 52.903 | 155 | 70 | 1 | 9 | 163 | 8 | 159 | 4.27e-51 | 172 |
Msa0377860 | AT4G35580.1 | 54.054 | 148 | 68 | 0 | 10 | 157 | 12 | 159 | 4.32e-51 | 178 |
Msa0377860 | AT4G17980.1 | 51.266 | 158 | 73 | 2 | 4 | 157 | 3 | 160 | 5.00e-51 | 171 |
Msa0377860 | AT4G35580.2 | 54.054 | 148 | 68 | 0 | 10 | 157 | 12 | 159 | 5.39e-51 | 178 |
Msa0377860 | AT4G35580.3 | 54.054 | 148 | 68 | 0 | 10 | 157 | 12 | 159 | 5.52e-51 | 178 |
Msa0377860 | AT5G61430.1 | 52.866 | 157 | 70 | 2 | 9 | 163 | 18 | 172 | 7.36e-51 | 173 |
Msa0377860 | AT4G17980.2 | 51.266 | 158 | 73 | 2 | 4 | 157 | 3 | 160 | 1.04e-50 | 171 |
Msa0377860 | AT3G49530.1 | 51.333 | 150 | 72 | 1 | 10 | 158 | 16 | 165 | 1.23e-50 | 176 |
Msa0377860 | AT5G22290.1 | 47.126 | 174 | 76 | 3 | 3 | 167 | 17 | 183 | 1.30e-50 | 172 |
Msa0377860 | AT5G39610.1 | 54.430 | 158 | 66 | 3 | 9 | 163 | 22 | 176 | 1.98e-50 | 170 |
Msa0377860 | AT5G46590.1 | 49.359 | 156 | 77 | 2 | 4 | 157 | 3 | 158 | 1.20e-49 | 168 |
Msa0377860 | AT1G71930.2 | 48.734 | 158 | 78 | 2 | 7 | 163 | 9 | 164 | 2.90e-49 | 168 |
Msa0377860 | AT1G71930.1 | 48.734 | 158 | 78 | 2 | 7 | 163 | 9 | 164 | 2.90e-49 | 168 |
Msa0377860 | AT4G10350.1 | 50.331 | 151 | 74 | 1 | 9 | 158 | 11 | 161 | 3.87e-49 | 169 |
Msa0377860 | AT3G44290.2 | 51.020 | 147 | 64 | 2 | 8 | 154 | 15 | 153 | 7.21e-49 | 164 |
Msa0377860 | AT3G18400.1 | 51.678 | 149 | 69 | 2 | 9 | 157 | 7 | 152 | 8.53e-49 | 167 |
Msa0377860 | AT5G07680.2 | 51.592 | 157 | 72 | 2 | 9 | 163 | 5 | 159 | 8.94e-49 | 167 |
Msa0377860 | AT1G32870.2 | 51.786 | 168 | 77 | 2 | 7 | 172 | 10 | 175 | 9.97e-49 | 172 |
Msa0377860 | AT1G32870.1 | 51.786 | 168 | 77 | 2 | 7 | 172 | 10 | 175 | 1.22e-48 | 172 |
Msa0377860 | AT5G07680.1 | 51.592 | 157 | 72 | 2 | 9 | 163 | 19 | 173 | 1.32e-48 | 167 |
Msa0377860 | AT1G12260.2 | 47.561 | 164 | 77 | 4 | 9 | 168 | 9 | 167 | 1.60e-48 | 167 |
Msa0377860 | AT1G12260.1 | 47.561 | 164 | 77 | 4 | 9 | 168 | 9 | 167 | 2.41e-48 | 168 |
Msa0377860 | AT1G32870.3 | 51.786 | 168 | 77 | 2 | 7 | 172 | 46 | 211 | 2.86e-48 | 171 |
Msa0377860 | AT3G44290.1 | 51.370 | 146 | 63 | 2 | 9 | 154 | 16 | 153 | 5.69e-48 | 165 |
Msa0377860 | AT2G18060.3 | 41.500 | 200 | 104 | 4 | 9 | 206 | 11 | 199 | 6.09e-48 | 166 |
Msa0377860 | AT2G18060.1 | 41.500 | 200 | 104 | 4 | 9 | 206 | 11 | 199 | 6.09e-48 | 166 |
Msa0377860 | AT5G18270.2 | 44.811 | 212 | 105 | 6 | 9 | 215 | 23 | 227 | 6.26e-48 | 165 |
Msa0377860 | AT5G46590.2 | 52.174 | 138 | 65 | 1 | 4 | 140 | 3 | 140 | 1.21e-47 | 163 |
Msa0377860 | AT1G01720.1 | 46.746 | 169 | 83 | 3 | 1 | 165 | 1 | 166 | 1.74e-47 | 162 |
Msa0377860 | AT5G18270.1 | 44.340 | 212 | 106 | 6 | 9 | 215 | 23 | 227 | 1.88e-47 | 164 |
Msa0377860 | AT1G33280.1 | 49.669 | 151 | 72 | 2 | 9 | 158 | 10 | 157 | 2.15e-47 | 163 |
Msa0377860 | AT2G24430.2 | 50.318 | 157 | 73 | 3 | 3 | 157 | 12 | 165 | 3.26e-47 | 163 |
Msa0377860 | AT2G24430.1 | 50.318 | 157 | 73 | 3 | 3 | 157 | 12 | 165 | 3.26e-47 | 163 |
Msa0377860 | AT1G77450.1 | 48.701 | 154 | 73 | 3 | 9 | 159 | 12 | 162 | 4.02e-47 | 160 |
Msa0377860 | AT3G29035.1 | 49.697 | 165 | 79 | 2 | 9 | 171 | 26 | 188 | 5.65e-47 | 162 |
Msa0377860 | AT1G62700.1 | 48.701 | 154 | 70 | 4 | 9 | 158 | 9 | 157 | 7.71e-47 | 164 |
Msa0377860 | AT1G62700.2 | 48.701 | 154 | 70 | 4 | 9 | 158 | 9 | 157 | 7.71e-47 | 164 |
Msa0377860 | AT4G36160.1 | 48.026 | 152 | 74 | 3 | 9 | 158 | 12 | 160 | 1.48e-46 | 163 |
Msa0377860 | AT4G36160.3 | 48.026 | 152 | 74 | 3 | 9 | 158 | 12 | 160 | 1.48e-46 | 163 |
Msa0377860 | AT4G36160.2 | 48.026 | 152 | 74 | 3 | 9 | 158 | 16 | 164 | 1.57e-46 | 163 |
Msa0377860 | AT1G69490.1 | 38.756 | 209 | 110 | 3 | 9 | 201 | 11 | 217 | 2.30e-46 | 159 |
Msa0377860 | AT4G27410.2 | 45.513 | 156 | 83 | 1 | 9 | 164 | 16 | 169 | 3.02e-46 | 160 |
Msa0377860 | AT1G52890.1 | 47.333 | 150 | 77 | 1 | 9 | 158 | 16 | 163 | 3.43e-46 | 160 |
Msa0377860 | AT3G15170.1 | 48.765 | 162 | 77 | 3 | 6 | 163 | 19 | 178 | 6.43e-46 | 159 |
Msa0377860 | AT3G15500.1 | 46.667 | 150 | 78 | 1 | 9 | 158 | 16 | 163 | 9.18e-46 | 159 |
Msa0377860 | AT5G53950.1 | 50.311 | 161 | 72 | 4 | 2 | 157 | 12 | 169 | 3.27e-45 | 159 |
Msa0377860 | AT5G08790.1 | 46.626 | 163 | 78 | 4 | 3 | 159 | 2 | 161 | 3.29e-45 | 157 |
Msa0377860 | AT1G56010.2 | 45.506 | 178 | 90 | 4 | 1 | 174 | 14 | 188 | 3.83e-45 | 157 |
Msa0377860 | AT3G04060.1 | 49.677 | 155 | 73 | 3 | 9 | 160 | 22 | 174 | 6.43e-45 | 157 |
Msa0377860 | AT1G79580.3 | 48.026 | 152 | 74 | 3 | 9 | 158 | 19 | 167 | 6.71e-45 | 158 |
Msa0377860 | AT1G79580.5 | 48.026 | 152 | 74 | 3 | 9 | 158 | 19 | 167 | 6.71e-45 | 158 |
Msa0377860 | AT1G79580.4 | 48.026 | 152 | 74 | 3 | 9 | 158 | 19 | 167 | 6.71e-45 | 158 |
Msa0377860 | AT1G79580.2 | 48.026 | 152 | 74 | 3 | 9 | 158 | 19 | 167 | 6.71e-45 | 158 |
Msa0377860 | AT1G79580.1 | 48.026 | 152 | 74 | 3 | 9 | 158 | 19 | 167 | 6.71e-45 | 158 |
Msa0377860 | AT1G32510.1 | 45.000 | 160 | 80 | 2 | 6 | 157 | 5 | 164 | 1.99e-44 | 154 |
Msa0377860 | AT5G62380.2 | 48.684 | 152 | 73 | 3 | 9 | 158 | 9 | 157 | 2.75e-44 | 156 |
Msa0377860 | AT5G62380.1 | 48.684 | 152 | 73 | 3 | 9 | 158 | 9 | 157 | 2.75e-44 | 156 |
Msa0377860 | AT5G66300.1 | 45.181 | 166 | 85 | 4 | 9 | 171 | 14 | 176 | 4.18e-44 | 154 |
Msa0377860 | AT3G12977.1 | 46.753 | 154 | 79 | 2 | 9 | 161 | 20 | 171 | 1.49e-43 | 152 |
Msa0377860 | AT1G61110.1 | 47.531 | 162 | 70 | 4 | 9 | 157 | 18 | 177 | 2.43e-43 | 153 |
Msa0377860 | AT2G02450.1 | 44.516 | 155 | 81 | 3 | 6 | 159 | 50 | 200 | 3.69e-43 | 154 |
Msa0377860 | AT3G04070.2 | 44.099 | 161 | 76 | 3 | 9 | 157 | 12 | 170 | 4.45e-43 | 152 |
Msa0377860 | AT2G02450.2 | 44.516 | 155 | 81 | 3 | 6 | 159 | 50 | 200 | 5.68e-43 | 154 |
Msa0377860 | AT4G27410.3 | 40.936 | 171 | 86 | 1 | 9 | 164 | 16 | 186 | 9.79e-43 | 151 |
Msa0377860 | AT5G39820.1 | 42.857 | 175 | 75 | 5 | 6 | 157 | 19 | 191 | 9.98e-43 | 152 |
Msa0377860 | AT1G26870.1 | 44.785 | 163 | 77 | 4 | 6 | 157 | 15 | 175 | 1.39e-42 | 153 |
Msa0377860 | AT5G13180.1 | 48.125 | 160 | 71 | 4 | 9 | 164 | 16 | 167 | 2.61e-42 | 148 |
Msa0377860 | AT1G76420.1 | 48.366 | 153 | 74 | 3 | 9 | 159 | 24 | 173 | 3.42e-42 | 150 |
Msa0377860 | AT3G15510.1 | 43.069 | 202 | 89 | 9 | 11 | 198 | 21 | 210 | 3.46e-42 | 151 |
Msa0377860 | AT5G63790.1 | 44.785 | 163 | 81 | 4 | 3 | 159 | 45 | 204 | 6.40e-42 | 149 |
Msa0377860 | AT5G63790.2 | 44.785 | 163 | 81 | 4 | 3 | 159 | 55 | 214 | 7.47e-42 | 149 |
Msa0377860 | AT3G04070.1 | 39.720 | 214 | 109 | 6 | 9 | 215 | 12 | 212 | 1.70e-41 | 149 |
Msa0377860 | AT2G33480.1 | 51.634 | 153 | 63 | 4 | 9 | 158 | 17 | 161 | 1.77e-41 | 146 |
Msa0377860 | AT2G17040.1 | 44.444 | 153 | 75 | 4 | 8 | 157 | 7 | 152 | 2.83e-41 | 146 |
Msa0377860 | AT2G33480.2 | 50.000 | 152 | 65 | 3 | 9 | 158 | 17 | 159 | 3.87e-41 | 145 |
Msa0377860 | AT2G43000.1 | 42.949 | 156 | 86 | 2 | 3 | 157 | 14 | 167 | 2.72e-40 | 143 |
Msa0377860 | AT1G32770.1 | 41.975 | 162 | 83 | 2 | 9 | 159 | 18 | 179 | 3.66e-40 | 145 |
Msa0377860 | AT3G61910.1 | 43.636 | 165 | 75 | 4 | 9 | 157 | 13 | 175 | 9.17e-40 | 144 |
Msa0377860 | AT2G46770.1 | 40.964 | 166 | 80 | 3 | 9 | 158 | 18 | 181 | 2.49e-39 | 143 |
Msa0377860 | AT1G52880.1 | 45.283 | 159 | 73 | 4 | 11 | 157 | 21 | 177 | 1.07e-38 | 140 |
Msa0377860 | AT5G04395.1 | 43.452 | 168 | 77 | 4 | 2 | 155 | 24 | 187 | 1.85e-36 | 130 |
Msa0377860 | AT4G28530.1 | 43.114 | 167 | 71 | 4 | 9 | 157 | 12 | 172 | 5.53e-36 | 134 |
Msa0377860 | AT3G12910.1 | 38.953 | 172 | 85 | 4 | 3 | 157 | 17 | 185 | 3.91e-34 | 128 |
Msa0377860 | AT5G61430.2 | 55.046 | 109 | 47 | 1 | 57 | 163 | 1 | 109 | 8.00e-34 | 126 |
Msa0377860 | AT1G56010.1 | 47.863 | 117 | 58 | 1 | 61 | 174 | 5 | 121 | 1.44e-30 | 117 |
Msa0377860 | AT3G12977.2 | 49.524 | 105 | 52 | 1 | 59 | 162 | 15 | 119 | 1.76e-30 | 116 |
Msa0377860 | AT4G10350.2 | 50.526 | 95 | 47 | 0 | 64 | 158 | 20 | 114 | 1.22e-29 | 115 |
Msa0377860 | AT3G10490.4 | 53.922 | 102 | 45 | 2 | 81 | 181 | 1 | 101 | 4.43e-29 | 115 |
Msa0377860 | AT3G10490.3 | 53.922 | 102 | 45 | 2 | 81 | 181 | 1 | 101 | 4.43e-29 | 115 |
Msa0377860 | AT4G01520.1 | 40.000 | 155 | 79 | 5 | 10 | 157 | 7 | 154 | 5.21e-29 | 114 |
Msa0377860 | AT4G01550.1 | 40.698 | 172 | 83 | 7 | 10 | 171 | 7 | 169 | 1.25e-28 | 116 |
Msa0377860 | AT5G22380.1 | 38.217 | 157 | 90 | 5 | 10 | 159 | 8 | 164 | 2.15e-28 | 111 |
Msa0377860 | AT4G01540.3 | 40.000 | 155 | 79 | 5 | 10 | 157 | 7 | 154 | 3.94e-28 | 114 |
Msa0377860 | AT3G44350.2 | 38.710 | 155 | 90 | 5 | 10 | 159 | 8 | 162 | 5.56e-28 | 110 |
Msa0377860 | AT4G01540.4 | 40.000 | 155 | 79 | 5 | 10 | 157 | 7 | 154 | 6.39e-28 | 113 |
Msa0377860 | AT4G01540.1 | 40.000 | 155 | 79 | 5 | 10 | 157 | 7 | 154 | 6.60e-28 | 114 |
Msa0377860 | AT4G01540.2 | 40.000 | 155 | 79 | 5 | 10 | 157 | 7 | 154 | 7.03e-28 | 113 |
Msa0377860 | AT1G02230.1 | 40.127 | 157 | 77 | 6 | 6 | 154 | 1 | 148 | 2.61e-25 | 105 |
Msa0377860 | AT3G44350.1 | 37.908 | 153 | 90 | 5 | 10 | 157 | 8 | 160 | 2.85e-25 | 100 |
Msa0377860 | AT3G04420.2 | 37.333 | 150 | 87 | 2 | 10 | 157 | 6 | 150 | 2.51e-24 | 101 |
Msa0377860 | AT3G04420.1 | 40.800 | 125 | 72 | 1 | 10 | 132 | 6 | 130 | 6.99e-24 | 101 |
Msa0377860 | AT2G33480.3 | 49.524 | 105 | 49 | 3 | 57 | 158 | 1 | 104 | 1.67e-23 | 97.1 |
Msa0377860 | AT1G02250.1 | 38.816 | 152 | 77 | 5 | 10 | 154 | 6 | 148 | 1.08e-21 | 95.1 |
Msa0377860 | AT5G64530.1 | 35.329 | 167 | 74 | 7 | 9 | 157 | 5 | 155 | 1.19e-20 | 89.0 |
Msa0377860 | AT5G64530.2 | 40.909 | 132 | 58 | 6 | 9 | 136 | 5 | 120 | 6.36e-20 | 85.9 |
Msa0377860 | AT1G01010.1 | 38.608 | 158 | 74 | 7 | 10 | 154 | 6 | 153 | 6.85e-20 | 90.9 |
Msa0377860 | AT1G02220.1 | 35.294 | 153 | 79 | 5 | 10 | 155 | 6 | 145 | 1.18e-19 | 89.7 |
Msa0377860 | AT2G18060.2 | 36.364 | 121 | 65 | 3 | 87 | 206 | 2 | 111 | 3.04e-19 | 87.0 |
Msa0377860 | AT4G28530.2 | 38.281 | 128 | 59 | 3 | 9 | 118 | 12 | 137 | 4.30e-19 | 87.0 |
Msa0377860 | AT5G22290.2 | 42.222 | 90 | 37 | 2 | 87 | 167 | 1 | 84 | 8.36e-18 | 82.0 |
Msa0377860 | AT2G43000.2 | 39.080 | 87 | 52 | 1 | 72 | 157 | 3 | 89 | 2.28e-15 | 74.3 |
Msa0377860 | AT3G56530.1 | 30.263 | 152 | 95 | 4 | 9 | 155 | 54 | 199 | 2.21e-14 | 73.6 |
Msa0377860 | AT5G14000.2 | 33.071 | 127 | 79 | 3 | 10 | 134 | 18 | 140 | 1.67e-12 | 65.1 |
Msa0377860 | AT5G14000.1 | 33.071 | 127 | 79 | 3 | 10 | 134 | 18 | 140 | 3.68e-12 | 65.5 |
Msa0377860 | AT3G55210.1 | 25.904 | 166 | 99 | 6 | 6 | 155 | 10 | 167 | 3.38e-11 | 63.5 |
Msa0377860 | AT1G28470.1 | 30.939 | 181 | 99 | 9 | 10 | 173 | 80 | 251 | 3.82e-11 | 63.9 |
Msa0377860 | AT3G04430.1 | 30.435 | 138 | 72 | 6 | 13 | 133 | 6 | 136 | 4.26e-11 | 62.0 |
Find 165 sgRNAs with CRISPR-Local
Find 399 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGTTTCTGTTTGTTGAATT+TGG | 0.123004 | 3_1:+78537404 | Msa0377860:five_prime_UTR |
CTTCTCCGTCTTCAATTATT+AGG | 0.126880 | 3_1:+78537265 | Msa0377860:five_prime_UTR |
TCCCAGTCTTTCTCATTAAA+TGG | 0.189856 | 3_1:-78539320 | None:intergenic |
TGTTTCTGTTTGTTGAATTT+GGG | 0.192648 | 3_1:+78537405 | Msa0377860:five_prime_UTR |
TGAATTTGAACATTGATTTC+TGG | 0.198998 | 3_1:+78541772 | Msa0377860:three_prime_UTR |
GTATTTATAATAGGATTATT+TGG | 0.207819 | 3_1:-78536922 | None:intergenic |
TGTCATTTACTTCAGAAATA+TGG | 0.230925 | 3_1:-78539424 | None:intergenic |
TCCATACTGTGCACCATTCC+TGG | 0.233076 | 3_1:-78539294 | None:intergenic |
ATCTCATTTGGAATTAAATA+AGG | 0.245537 | 3_1:-78541368 | None:intergenic |
GTACCTTATATGACATAATT+TGG | 0.249762 | 3_1:+78541647 | Msa0377860:three_prime_UTR |
CAATCAGTTCGGTCTCCTTT+AGG | 0.274643 | 3_1:-78537978 | None:intergenic |
AGCTGTTTCTGTTTCTGTTT+GGG | 0.308393 | 3_1:+78537459 | Msa0377860:five_prime_UTR |
TGACATTGCTGTTGCGCTTA+AGG | 0.311635 | 3_1:+78537373 | Msa0377860:five_prime_UTR |
TTCTCCGTCTTCAATTATTA+GGG | 0.314791 | 3_1:+78537266 | Msa0377860:five_prime_UTR |
AAGCTGTTTCTGTTTCTGTT+TGG | 0.317698 | 3_1:+78537458 | Msa0377860:five_prime_UTR |
GGAAGGGTAGTATTTATAAT+AGG | 0.328380 | 3_1:-78536931 | None:intergenic |
CTGCCAAATTATGTCATATA+AGG | 0.338830 | 3_1:-78541650 | None:intergenic |
GCTTGATCACAGTTATTTGT+TGG | 0.357488 | 3_1:+78541829 | Msa0377860:three_prime_UTR |
GTGCAATATTTCTTTCCAAC+AGG | 0.361824 | 3_1:-78537828 | None:intergenic |
TCAAGCAACTCAAAGAAATC+AGG | 0.367048 | 3_1:-78541524 | None:intergenic |
TTTCTGTTTCTGTTTGGGTT+TGG | 0.370100 | 3_1:+78537464 | Msa0377860:five_prime_UTR |
GGGGTTGCTTCTCTCTCTTC+CGG | 0.374828 | 3_1:-78536865 | None:intergenic |
GGTGCAGACACAGCAGCAAC+AGG | 0.376155 | 3_1:-78539377 | None:intergenic |
GAAACAAAATTGATGATTCC+AGG | 0.377486 | 3_1:+78537513 | Msa0377860:CDS |
TGTTTAGTCTGCCAGGATAA+TGG | 0.379048 | 3_1:-78541557 | None:intergenic |
TGTTTAGTCTGCCAGGATAA+TGG | 0.379048 | 3_1:-78541616 | None:intergenic |
ACAATCGTCGCAGCAGGCTT+TGG | 0.383872 | 3_1:+78537210 | Msa0377860:five_prime_UTR |
CCCAGGAATGGTGCACAGTA+TGG | 0.387270 | 3_1:+78539293 | Msa0377860:CDS |
AGAACTCCTATGTGATTTGT+AGG | 0.387741 | 3_1:+78539246 | Msa0377860:intron |
AACCATTTAATGAGAAAGAC+TGG | 0.390374 | 3_1:+78539318 | Msa0377860:CDS |
AGTTCAGCAATGACATGAAA+AGG | 0.397881 | 3_1:-78537609 | None:intergenic |
CCCTCTGCAAGTGGATGTAT+TGG | 0.400344 | 3_1:+78539452 | Msa0377860:CDS |
ATTCATCAGTTTACATATGT+TGG | 0.409632 | 3_1:-78541801 | None:intergenic |
GCACGGGAGGGAGGATGAAT+CGG | 0.411671 | 3_1:+78537847 | Msa0377860:CDS |
TATTAACAGCTTGGTTGGAT+TGG | 0.414108 | 3_1:+78541409 | Msa0377860:CDS |
CCATACTGTGCACCATTCCT+GGG | 0.415740 | 3_1:-78539293 | None:intergenic |
GGAATATCTTCTTCCGCCAT+TGG | 0.422112 | 3_1:+78537231 | Msa0377860:five_prime_UTR |
ACATAAAATCGCCTCGTTCG+CGG | 0.439243 | 3_1:+78536983 | Msa0377860:five_prime_UTR |
GGAGATATTAACAGCTTGGT+TGG | 0.445872 | 3_1:+78541404 | Msa0377860:CDS |
TCCATCATGTTTAGTCTGCC+AGG | 0.448649 | 3_1:-78541623 | None:intergenic |
GGAAAATTGTTGCTTGGTGG+AGG | 0.453529 | 3_1:-78536886 | None:intergenic |
GACGATGAAAATGCATTGGC+CGG | 0.464243 | 3_1:+78539584 | Msa0377860:CDS |
ACCTAGAGGTGCCATTATCC+TGG | 0.465437 | 3_1:+78541546 | Msa0377860:CDS |
ACCTAGAGGTGCCATTATCC+TGG | 0.465437 | 3_1:+78541605 | Msa0377860:three_prime_UTR |
ATGAATCGGGCAACAGAAGT+AGG | 0.466475 | 3_1:+78537861 | Msa0377860:CDS |
CTAAAGGAGACCGAACTGAT+TGG | 0.467195 | 3_1:+78537979 | Msa0377860:CDS |
TGGTACTTCTTTACCCCTGT+TGG | 0.468244 | 3_1:+78537813 | Msa0377860:CDS |
GCCATCATGTTTAGTCTGCC+AGG | 0.468396 | 3_1:-78541564 | None:intergenic |
ATAAACGAAAAGCTATTTGC+TGG | 0.469573 | 3_1:+78541476 | Msa0377860:CDS |
AAAAGGAAGGTCCTGGTCCC+AGG | 0.470057 | 3_1:+78539276 | Msa0377860:CDS |
AAAATTGTTGCTTGGTGGAG+GGG | 0.475271 | 3_1:-78536884 | None:intergenic |
TAAAGGAGACCGAACTGATT+GGG | 0.479184 | 3_1:+78537980 | Msa0377860:CDS |
CACGGGAGGGAGGATGAATC+GGG | 0.479266 | 3_1:+78537848 | Msa0377860:CDS |
TGAAGAGAAAATGTTGAGAC+TGG | 0.482912 | 3_1:-78537181 | None:intergenic |
CTTTGAGTTGCTTGACCTAG+AGG | 0.489029 | 3_1:+78541532 | Msa0377860:CDS |
CGACAGAAGGTTGATAATCC+TGG | 0.495670 | 3_1:+78541320 | Msa0377860:intron |
ATGACACACCCTTCAGCTCT+AGG | 0.498439 | 3_1:+78539518 | Msa0377860:CDS |
TCAGCGTTGTTTGCTTGACC+AGG | 0.500954 | 3_1:-78541338 | None:intergenic |
CATTTACAAGTATGCTCCAT+GGG | 0.502977 | 3_1:+78537635 | Msa0377860:CDS |
CCGTTGTAAGACATTGTATG+TGG | 0.504987 | 3_1:+78541732 | Msa0377860:three_prime_UTR |
TCACCCCACTGATGTTGAGC+TGG | 0.506550 | 3_1:+78537545 | Msa0377860:CDS |
CTATCAAGATTGATGCCCTC+TGG | 0.507191 | 3_1:+78539494 | Msa0377860:CDS |
CACACTGGCAAAGCTCCTAA+AGG | 0.508822 | 3_1:+78537963 | Msa0377860:CDS |
GGGCAACAGAAGTAGGGTAC+TGG | 0.511584 | 3_1:+78537868 | Msa0377860:CDS |
GTAGGGTACTGGAAGACTAC+AGG | 0.511858 | 3_1:+78537879 | Msa0377860:CDS |
GGTGCTTTCTCATCCTTCTC+CGG | 0.514866 | 3_1:+78537004 | Msa0377860:five_prime_UTR |
GTTTCTGTTTGTTGAATTTG+GGG | 0.517264 | 3_1:+78537406 | Msa0377860:five_prime_UTR |
GCTTGATTGCCTAGAGCTGA+AGG | 0.517653 | 3_1:-78539527 | None:intergenic |
TGAATAACAATCGTCGCAGC+AGG | 0.518056 | 3_1:+78537204 | Msa0377860:five_prime_UTR |
CTTTGCCAGTGTGAAACACC+AGG | 0.519578 | 3_1:-78537953 | None:intergenic |
GTTCAGCAATGACATGAAAA+GGG | 0.521712 | 3_1:-78537608 | None:intergenic |
CCTGGGAGATATTAACAGCT+TGG | 0.523071 | 3_1:+78541400 | Msa0377860:CDS |
GTGGAACACCATTGTCAGCT+AGG | 0.523981 | 3_1:-78538034 | None:intergenic |
GAGAAAATGTTGAGACTGGA+AGG | 0.524796 | 3_1:-78537177 | None:intergenic |
GATTTGTAGGGTATTTCAAA+AGG | 0.527496 | 3_1:+78539259 | Msa0377860:CDS |
GAGAGTGTATGAAGCACGGA+AGG | 0.527886 | 3_1:-78536948 | None:intergenic |
AGCTTGGTTGGATTGGATGA+TGG | 0.527918 | 3_1:+78541416 | Msa0377860:CDS |
TGTAGGGTATTTCAAAAGGA+AGG | 0.527921 | 3_1:+78539263 | Msa0377860:CDS |
GCTACAACGGATGGTGATGA+TGG | 0.530888 | 3_1:-78537155 | None:intergenic |
TCCAATACATCCACTTGCAG+AGG | 0.532823 | 3_1:-78539453 | None:intergenic |
TTTCGACGATGAAAATGCAT+TGG | 0.532966 | 3_1:+78539580 | Msa0377860:CDS |
ATCGTCGAAAATAGCAAGCA+TGG | 0.533664 | 3_1:-78539567 | None:intergenic |
AATGGAAAATTGTTGCTTGG+TGG | 0.535723 | 3_1:-78536889 | None:intergenic |
AAGAGGAAGCTTACCGGAGA+AGG | 0.538649 | 3_1:-78537017 | None:intergenic |
CATGCATAACCCAATCAGTT+CGG | 0.542397 | 3_1:-78537989 | None:intergenic |
CAAGCAACTCAAAGAAATCA+GGG | 0.542667 | 3_1:-78541523 | None:intergenic |
TCTTCCGGTGAGTGAGTAAG+AGG | 0.544744 | 3_1:-78536850 | None:intergenic |
AGCTGACAATGGTGTTCCAC+AGG | 0.546378 | 3_1:+78538037 | Msa0377860:CDS |
GAAAATTGTTGCTTGGTGGA+GGG | 0.547369 | 3_1:-78536885 | None:intergenic |
AGAAATATTGCACGGGAGGG+AGG | 0.549227 | 3_1:+78537838 | Msa0377860:CDS |
TCTTGATAGACATGATAAAG+AGG | 0.553266 | 3_1:-78539480 | None:intergenic |
TCCAAACCTGGTAGATCCCA+TGG | 0.553951 | 3_1:-78537651 | None:intergenic |
AAACAAAATTGATGATTCCA+GGG | 0.554783 | 3_1:+78537514 | Msa0377860:CDS |
GAACATAAGAATCAAGTGGT+GGG | 0.560868 | 3_1:+78537918 | Msa0377860:CDS |
TGCAATATTTCTTTCCAACA+GGG | 0.561122 | 3_1:-78537827 | None:intergenic |
GAAGGTCCTGGTCCCAGGAA+TGG | 0.561485 | 3_1:+78539281 | Msa0377860:CDS |
ACAAGAATTTACTCAAACAA+AGG | 0.564360 | 3_1:-78541857 | None:intergenic |
GACTGGAAGGCTACAACGGA+TGG | 0.568610 | 3_1:-78537164 | None:intergenic |
TCAGAAATATGGCTTGAGCT+AGG | 0.568979 | 3_1:-78539413 | None:intergenic |
GATAAATCTTTGCTCAAGAG+TGG | 0.570392 | 3_1:+78537780 | Msa0377860:intron |
GTTGGATTGGATGATGGAAG+CGG | 0.572350 | 3_1:+78541422 | Msa0377860:CDS |
GGAAGACTACAGGGAAGGAT+AGG | 0.572952 | 3_1:+78537889 | Msa0377860:CDS |
CTAATAATTGAAGACGGAGA+AGG | 0.573119 | 3_1:-78537264 | None:intergenic |
ACATTTACAAGTATGCTCCA+TGG | 0.574983 | 3_1:+78537634 | Msa0377860:CDS |
TCCTGGCAGACTAAACATGA+TGG | 0.576156 | 3_1:+78541622 | Msa0377860:three_prime_UTR |
ACGATGAAAATGCATTGGCC+GGG | 0.583391 | 3_1:+78539585 | Msa0377860:CDS |
GTATTTCAAAAGGAAGGTCC+TGG | 0.583445 | 3_1:+78539269 | Msa0377860:CDS |
GAACTCCTATGTGATTTGTA+GGG | 0.583857 | 3_1:+78539247 | Msa0377860:intron |
TCCACCTCTTACTCACTCAC+CGG | 0.586162 | 3_1:+78536846 | None:intergenic |
AACATAAGAATCAAGTGGTG+GGG | 0.590194 | 3_1:+78537919 | Msa0377860:CDS |
TTCTGAGTTACTTGACCTAG+AGG | 0.592289 | 3_1:+78541591 | Msa0377860:three_prime_UTR |
TGAATCGGGCAACAGAAGTA+GGG | 0.592463 | 3_1:+78537862 | Msa0377860:CDS |
GGTCAAGCAAACAACGCTGA+AGG | 0.593547 | 3_1:+78541341 | Msa0377860:CDS |
CAACAAACAGAAACAAACTC+TGG | 0.595937 | 3_1:-78537397 | None:intergenic |
ATTACCAGCTCAACATCAGT+GGG | 0.596276 | 3_1:-78537549 | None:intergenic |
ATGAGAAAGCACCGCGAACG+AGG | 0.596637 | 3_1:-78536994 | None:intergenic |
GGAAAGAAATATTGCACGGG+AGG | 0.596853 | 3_1:+78537834 | Msa0377860:CDS |
GACATGCATCCCTCTGCAAG+TGG | 0.596887 | 3_1:+78539443 | Msa0377860:CDS |
AGAACCCTGGTGTTTCACAC+TGG | 0.601634 | 3_1:+78537948 | Msa0377860:CDS |
GAGAGAGAGTGTATGAAGCA+CGG | 0.602258 | 3_1:-78536952 | None:intergenic |
GCCAGGATAATGGCACCTCT+AGG | 0.602723 | 3_1:-78541547 | None:intergenic |
GCCAGGATAATGGCACCTCT+AGG | 0.602723 | 3_1:-78541606 | None:intergenic |
TGTGCACCATTCCTGGGACC+AGG | 0.603992 | 3_1:-78539287 | None:intergenic |
GTGGGGTGAAAACGAAACCC+TGG | 0.604367 | 3_1:-78537531 | None:intergenic |
CATTACCAGCTCAACATCAG+TGG | 0.606060 | 3_1:-78537550 | None:intergenic |
AGCAACTCAAAGAAATCAGG+GGG | 0.608948 | 3_1:-78541521 | None:intergenic |
TCCGGTGAGTGAGTAAGAGG+TGG | 0.610007 | 3_1:-78536847 | None:intergenic |
TCCTGGCAGACTAAACATGA+TGG | 0.610442 | 3_1:+78541563 | Msa0377860:CDS |
CCAAGCTGTTAATATCTCCC+AGG | 0.614179 | 3_1:-78541400 | None:intergenic |
CTTGATTGCCTAGAGCTGAA+GGG | 0.615214 | 3_1:-78539526 | None:intergenic |
GAATGAAAACAATGGATCTG+AGG | 0.618267 | 3_1:+78539607 | Msa0377860:CDS |
GCAATATTTCTTTCCAACAG+GGG | 0.618582 | 3_1:-78537826 | None:intergenic |
CCAATACATCCACTTGCAGA+GGG | 0.625389 | 3_1:-78539452 | None:intergenic |
GAGCTAGGTAGAATGAGAGC+TGG | 0.627457 | 3_1:-78539398 | None:intergenic |
GTTGGAAAGAAATATTGCAC+GGG | 0.629534 | 3_1:+78537831 | Msa0377860:CDS |
TGAACATAAGAATCAAGTGG+TGG | 0.630537 | 3_1:+78537917 | Msa0377860:CDS |
TGAAGGGTGTGTCATGCCAG+AGG | 0.630682 | 3_1:-78539510 | None:intergenic |
TGTTGGAAAGAAATATTGCA+CGG | 0.632190 | 3_1:+78537830 | Msa0377860:CDS |
TTTCTGTTTGTTGAATTTGG+GGG | 0.633894 | 3_1:+78537407 | Msa0377860:five_prime_UTR |
ACCATTTAATGAGAAAGACT+GGG | 0.636505 | 3_1:+78539319 | Msa0377860:CDS |
GAAGGGTGTGTCATGCCAGA+GGG | 0.638957 | 3_1:-78539509 | None:intergenic |
AGAAGGAAGATCAAGTCCAA+TGG | 0.639679 | 3_1:-78537247 | None:intergenic |
TATGCTCCATGGGATCTACC+AGG | 0.645247 | 3_1:+78537645 | Msa0377860:CDS |
TAGGGTACTGGAAGACTACA+GGG | 0.648401 | 3_1:+78537880 | Msa0377860:CDS |
TTGGCCGGGAATGAAAACAA+TGG | 0.650090 | 3_1:+78539599 | Msa0377860:CDS |
ACAACCCTAATAATTGAAGA+CGG | 0.651257 | 3_1:-78537270 | None:intergenic |
GACAAAGACCTAGCTGACAA+TGG | 0.652509 | 3_1:+78538026 | Msa0377860:CDS |
AGAGTGTATGAAGCACGGAA+GGG | 0.653850 | 3_1:-78536947 | None:intergenic |
TTGAGACTGGAAGGCTACAA+CGG | 0.654683 | 3_1:-78537168 | None:intergenic |
GTGCAGACACAGCAGCAACA+GGG | 0.657913 | 3_1:-78539376 | None:intergenic |
AAATACCCTACAAATCACAT+AGG | 0.659266 | 3_1:-78539252 | None:intergenic |
TCAAGAGTGGTGATTTGCAA+TGG | 0.660182 | 3_1:+78537793 | Msa0377860:CDS |
CCACATACAATGTCTTACAA+CGG | 0.670248 | 3_1:-78541732 | None:intergenic |
AGGAAGATCAAGTCCAATGG+CGG | 0.670387 | 3_1:-78537244 | None:intergenic |
GTGATGATAAGAAAAGTCAT+CGG | 0.671182 | 3_1:-78537128 | None:intergenic |
GAAAGAAATATTGCACGGGA+GGG | 0.676449 | 3_1:+78537835 | Msa0377860:CDS |
GATTGAACATAAGAATCAAG+TGG | 0.676975 | 3_1:+78537914 | Msa0377860:CDS |
GTACTGGAAGACTACAGGGA+AGG | 0.680520 | 3_1:+78537884 | Msa0377860:CDS |
AAGCAACTCAAAGAAATCAG+GGG | 0.683918 | 3_1:-78541522 | None:intergenic |
AAGAAAAGTCATCGGCACAG+TGG | 0.690558 | 3_1:-78537120 | None:intergenic |
GAAAGACTGGGATAGCGAAG+AGG | 0.695888 | 3_1:+78539331 | Msa0377860:CDS |
TTTGCCAGTGTGAAACACCA+GGG | 0.703208 | 3_1:-78537952 | None:intergenic |
GGTGGGGATGATAAGAACCC+TGG | 0.707991 | 3_1:+78537935 | Msa0377860:CDS |
GCAACTCAAAGAAATCAGGG+GGG | 0.804791 | 3_1:-78541520 | None:intergenic |
TTACCAGCTCAACATCAGTG+GGG | 0.822926 | 3_1:-78537548 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATGTTAAAAATAAAAAAGA+GGG | - | chr3_1:78537308-78537327 | None:intergenic | 10.0% |
!! | AATTATTATTAGTATTAACA+AGG | + | chr3_1:78538535-78538554 | Msa0377860:intron | 10.0% |
!! | ATTATTATTAGTATTAACAA+GGG | + | chr3_1:78538536-78538555 | Msa0377860:intron | 10.0% |
!! | TTATTATTAGTATTAATAAG+GGG | + | chr3_1:78538572-78538591 | Msa0377860:intron | 10.0% |
!! | AAAAAAAATAAAAAAAGTTG+AGG | - | chr3_1:78539745-78539764 | None:intergenic | 10.0% |
!!! | ATATTTTTGTTAAAAAAGAT+TGG | + | chr3_1:78540663-78540682 | Msa0377860:intron | 10.0% |
!!! | TATTTTTGTTAAAAAAGATT+GGG | + | chr3_1:78540664-78540683 | Msa0377860:intron | 10.0% |
!! | TTATTTGGAAAAAAGAAAAA+TGG | - | chr3_1:78536910-78536929 | None:intergenic | 15.0% |
!! | GTATTTATAATAGGATTATT+TGG | - | chr3_1:78536925-78536944 | None:intergenic | 15.0% |
!! | CAATGTTAAAAATAAAAAAG+AGG | - | chr3_1:78537309-78537328 | None:intergenic | 15.0% |
!! | ATAACTAAAAAACAAAAACT+AGG | - | chr3_1:78537347-78537366 | None:intergenic | 15.0% |
!!! | ACTAATAATAATTTGTCTTA+GGG | - | chr3_1:78538528-78538547 | None:intergenic | 15.0% |
!!! | TACTAATAATAATTTGTCTT+AGG | - | chr3_1:78538529-78538548 | None:intergenic | 15.0% |
!! | TTATTATTAGTATTAACAAG+GGG | + | chr3_1:78538537-78538556 | Msa0377860:intron | 15.0% |
!!! | ACTAATAATAATTTGTCTTA+GGG | - | chr3_1:78538528-78538547 | None:intergenic | 15.0% |
!!! | TACTAATAATAATTTGTCTT+AGG | - | chr3_1:78538529-78538548 | None:intergenic | 15.0% |
!! | TTGAAATAAGACTTATATTT+AGG | + | chr3_1:78538630-78538649 | Msa0377860:intron | 15.0% |
!!! | ATTTCTCTTATTTGTTTTTT+TGG | + | chr3_1:78538789-78538808 | Msa0377860:intron | 15.0% |
!!! | ATTTTTGTTAAAAAAGATTG+GGG | + | chr3_1:78540665-78540684 | Msa0377860:intron | 15.0% |
!!! | TTATAGTATTTTCATCTTTT+TGG | - | chr3_1:78541460-78541479 | None:intergenic | 15.0% |
!!! | AATTTGATAATGCAATGTTA+GGG | + | chr3_1:78537095-78537114 | Msa0377860:intron | 20.0% |
!!! | TTTTCTTTTTGATTTTTCGA+TGG | + | chr3_1:78537488-78537507 | Msa0377860:exon | 20.0% |
!! | ATATGTCAATAATCAAAAAC+TGG | - | chr3_1:78538203-78538222 | None:intergenic | 20.0% |
!!! | TATTTGTTTTTTTGGAAACT+TGG | + | chr3_1:78538797-78538816 | Msa0377860:intron | 20.0% |
!! | TCAAAGATAACTAAAAAAAG+AGG | - | chr3_1:78539797-78539816 | None:intergenic | 20.0% |
!! | AGCAAAAAAAAATGAGAAAT+CGG | + | chr3_1:78539995-78540014 | Msa0377860:intron | 20.0% |
!! | TACTTTCTACACATATTTAT+AGG | - | chr3_1:78540060-78540079 | None:intergenic | 20.0% |
!!! | TATTGTATTCTGCATTTTTT+GGG | + | chr3_1:78540539-78540558 | Msa0377860:intron | 20.0% |
!!! | TTTTTGTTAAAAAAGATTGG+GGG | + | chr3_1:78540666-78540685 | Msa0377860:intron | 20.0% |
!! | ATGAAAGTTTGTAAATTAGT+TGG | + | chr3_1:78540958-78540977 | Msa0377860:intron | 20.0% |
!!! | TGCTTCTTAATTTATTTCTT+TGG | - | chr3_1:78540992-78541011 | None:intergenic | 20.0% |
!! | AAAGAAATAAATTAAGAAGC+AGG | + | chr3_1:78540991-78541010 | Msa0377860:intron | 20.0% |
!!! | ATCTCATTTGGAATTAAATA+AGG | - | chr3_1:78541371-78541390 | None:intergenic | 20.0% |
! | AAAAATGGAAAATTGTTGCT+TGG | - | chr3_1:78536895-78536914 | None:intergenic | 25.0% |
!!! | GAATTTGATAATGCAATGTT+AGG | + | chr3_1:78537094-78537113 | Msa0377860:intron | 25.0% |
!!! | TTGTTTCTGTTTGTTGAATT+TGG | + | chr3_1:78537404-78537423 | Msa0377860:five_prime_UTR | 25.0% |
!! | TGTTTCTGTTTGTTGAATTT+GGG | + | chr3_1:78537405-78537424 | Msa0377860:five_prime_UTR | 25.0% |
!!! | TGGAATCATCAATTTTGTTT+CGG | - | chr3_1:78537514-78537533 | None:intergenic | 25.0% |
!! | AAACAAAATTGATGATTCCA+GGG | + | chr3_1:78537514-78537533 | Msa0377860:CDS | 25.0% |
!!! | CAAAAGTATTCTCTCAAAAA+AGG | + | chr3_1:78538988-78539007 | Msa0377860:intron | 25.0% |
!! | TGTCATTTACTTCAGAAATA+TGG | - | chr3_1:78539427-78539446 | None:intergenic | 25.0% |
! | TTATATAAAACATCACACTC+TGG | + | chr3_1:78539839-78539858 | Msa0377860:intron | 25.0% |
!!! | TTCTCATTTTTTTTTGCTAC+AGG | - | chr3_1:78539993-78540012 | None:intergenic | 25.0% |
! | GTACAAAATTCTTATGCATT+AGG | + | chr3_1:78540191-78540210 | Msa0377860:intron | 25.0% |
!!! | TTTTTTTTACGCCCTATTTT+TGG | + | chr3_1:78540329-78540348 | Msa0377860:intron | 25.0% |
! | TTACAAAGATAACAAAGAGA+AGG | - | chr3_1:78540363-78540382 | None:intergenic | 25.0% |
!!! | GTATTGTATTCTGCATTTTT+TGG | + | chr3_1:78540538-78540557 | Msa0377860:intron | 25.0% |
!!! | TGCATTTTTTGGGTATATTT+TGG | + | chr3_1:78540549-78540568 | Msa0377860:intron | 25.0% |
! | AAACTTTCATTTGCACAAAA+GGG | - | chr3_1:78540948-78540967 | None:intergenic | 25.0% |
!!! | TTTTTAATGGTTAGTCAAAG+GGG | - | chr3_1:78541105-78541124 | None:intergenic | 25.0% |
!!! | GTTTTTAATGGTTAGTCAAA+GGG | - | chr3_1:78541106-78541125 | None:intergenic | 25.0% |
!!! | AGTTTTTAATGGTTAGTCAA+AGG | - | chr3_1:78541107-78541126 | None:intergenic | 25.0% |
! | TTTGACTAACCATTAAAAAC+TGG | + | chr3_1:78541106-78541125 | Msa0377860:intron | 25.0% |
!! | AATTCCAAATGAGATTTTTG+AGG | + | chr3_1:78541376-78541395 | Msa0377860:CDS | 25.0% |
! | GTACCTTATATGACATAATT+TGG | + | chr3_1:78541647-78541666 | Msa0377860:three_prime_UTR | 25.0% |
!! | TAGTTTTCTCTAGTCATATA+AGG | - | chr3_1:78541693-78541712 | None:intergenic | 25.0% |
!!! | TGAATTTGAACATTGATTTC+TGG | + | chr3_1:78541772-78541791 | Msa0377860:three_prime_UTR | 25.0% |
! | ATTCATCAGTTTACATATGT+TGG | - | chr3_1:78541804-78541823 | None:intergenic | 25.0% |
GGAAGGGTAGTATTTATAAT+AGG | - | chr3_1:78536934-78536953 | None:intergenic | 30.0% | |
ATTTCATATTCTGAGCGATT+GGG | - | chr3_1:78537073-78537092 | None:intergenic | 30.0% | |
AATTTCATATTCTGAGCGAT+TGG | - | chr3_1:78537074-78537093 | None:intergenic | 30.0% | |
GTGATGATAAGAAAAGTCAT+CGG | - | chr3_1:78537131-78537150 | None:intergenic | 30.0% | |
! | GATGACTTTTCTTATCATCA+CGG | + | chr3_1:78537130-78537149 | Msa0377860:five_prime_UTR | 30.0% |
TTCTCCGTCTTCAATTATTA+GGG | + | chr3_1:78537266-78537285 | Msa0377860:five_prime_UTR | 30.0% | |
ACAACCCTAATAATTGAAGA+CGG | - | chr3_1:78537273-78537292 | None:intergenic | 30.0% | |
! | GTTTCTGTTTGTTGAATTTG+GGG | + | chr3_1:78537406-78537425 | Msa0377860:five_prime_UTR | 30.0% |
! | TTTCTGTTTGTTGAATTTGG+GGG | + | chr3_1:78537407-78537426 | Msa0377860:five_prime_UTR | 30.0% |
! | GAAACAAAATTGATGATTCC+AGG | + | chr3_1:78537513-78537532 | Msa0377860:CDS | 30.0% |
!! | TGGTAATGTATTTTCTCAAG+AGG | + | chr3_1:78537565-78537584 | Msa0377860:CDS | 30.0% |
! | TTTTCTCAAGAGGAAGATTT+TGG | + | chr3_1:78537575-78537594 | Msa0377860:CDS | 30.0% |
! | TTTCTCAAGAGGAAGATTTT+GGG | + | chr3_1:78537576-78537595 | Msa0377860:CDS | 30.0% |
!! | GTTTTAAGCTTTTTGTCTGT+CGG | + | chr3_1:78537692-78537711 | Msa0377860:intron | 30.0% |
TGCAATATTTCTTTCCAACA+GGG | - | chr3_1:78537830-78537849 | None:intergenic | 30.0% | |
TGTTGGAAAGAAATATTGCA+CGG | + | chr3_1:78537830-78537849 | Msa0377860:CDS | 30.0% | |
GATTGAACATAAGAATCAAG+TGG | + | chr3_1:78537914-78537933 | Msa0377860:CDS | 30.0% | |
GAGGAATTATGTTTACCAAT+TGG | + | chr3_1:78538076-78538095 | Msa0377860:intron | 30.0% | |
! | CCAACAAAAGCTGTAATTTT+AGG | - | chr3_1:78538233-78538252 | None:intergenic | 30.0% |
! | CCTAAAATTACAGCTTTTGT+TGG | + | chr3_1:78538230-78538249 | Msa0377860:intron | 30.0% |
GAGTTTAACATGAAAACACA+TGG | - | chr3_1:78538275-78538294 | None:intergenic | 30.0% | |
GACAAAGCTGTTTATATCAA+AGG | - | chr3_1:78538391-78538410 | None:intergenic | 30.0% | |
TAATGTATCCATTGTGTGTA+TGG | + | chr3_1:78538447-78538466 | Msa0377860:intron | 30.0% | |
!!! | TAGGAACAATTTTTTCCCAA+AGG | + | chr3_1:78538649-78538668 | Msa0377860:intron | 30.0% |
! | CTTTGAAAAAAATGGAAGGA+TGG | + | chr3_1:78538719-78538738 | Msa0377860:intron | 30.0% |
!!! | TTTTTTGGAAACTTGGTATC+CGG | + | chr3_1:78538804-78538823 | Msa0377860:intron | 30.0% |
!!! | ATTGTATTGGAGGAGTATTT+TGG | + | chr3_1:78538869-78538888 | Msa0377860:intron | 30.0% |
ACTTGGTATATTCTTAGTCT+GGG | + | chr3_1:78539143-78539162 | Msa0377860:intron | 30.0% | |
!!! | TTTTTTTCTGATTGTTCTCC+TGG | + | chr3_1:78539186-78539205 | Msa0377860:intron | 30.0% |
AGAACAGTTAAGATAAAACC+AGG | - | chr3_1:78539207-78539226 | None:intergenic | 30.0% | |
AAATACCCTACAAATCACAT+AGG | - | chr3_1:78539255-78539274 | None:intergenic | 30.0% | |
! | GATTTGTAGGGTATTTCAAA+AGG | + | chr3_1:78539259-78539278 | Msa0377860:CDS | 30.0% |
AACCATTTAATGAGAAAGAC+TGG | + | chr3_1:78539318-78539337 | Msa0377860:CDS | 30.0% | |
ACCATTTAATGAGAAAGACT+GGG | + | chr3_1:78539319-78539338 | Msa0377860:CDS | 30.0% | |
TCTTGATAGACATGATAAAG+AGG | - | chr3_1:78539483-78539502 | None:intergenic | 30.0% | |
CACATATTTATAGGTCATGT+GGG | - | chr3_1:78540051-78540070 | None:intergenic | 30.0% | |
ACACATATTTATAGGTCATG+TGG | - | chr3_1:78540052-78540071 | None:intergenic | 30.0% | |
! | ATGTATCACGTGTTATTAGA+AGG | + | chr3_1:78540251-78540270 | Msa0377860:intron | 30.0% |
CTTTCTATCAGTTTGATCAT+TGG | + | chr3_1:78540483-78540502 | Msa0377860:intron | 30.0% | |
ATAGGAAACTAAGACAAAAG+AGG | - | chr3_1:78540602-78540621 | None:intergenic | 30.0% | |
ACAAATGTCCAATGTTCTAA+TGG | - | chr3_1:78540633-78540652 | None:intergenic | 30.0% | |
TAGTCTAACATTCATTACCT+AGG | - | chr3_1:78540796-78540815 | None:intergenic | 30.0% | |
AACTTTCATTTGCACAAAAG+GGG | - | chr3_1:78540947-78540966 | None:intergenic | 30.0% | |
CAAACTTTCATTTGCACAAA+AGG | - | chr3_1:78540949-78540968 | None:intergenic | 30.0% | |
AACAAAAGAGACAGTAAGAT+TGG | - | chr3_1:78541031-78541050 | None:intergenic | 30.0% | |
!! | TCTTACTGTCTCTTTTGTTT+AGG | + | chr3_1:78541032-78541051 | Msa0377860:intron | 30.0% |
!! | CTTACTGTCTCTTTTGTTTA+GGG | + | chr3_1:78541033-78541052 | Msa0377860:intron | 30.0% |
ACTAACCATTAAAAACTGGA+AGG | + | chr3_1:78541110-78541129 | Msa0377860:intron | 30.0% | |
TTTGATCCTACTAATCAAGA+TGG | + | chr3_1:78541151-78541170 | Msa0377860:intron | 30.0% | |
!! | ATTTTCATCTTTTTGGCCAT+AGG | - | chr3_1:78541453-78541472 | None:intergenic | 30.0% |
ATAAACGAAAAGCTATTTGC+TGG | + | chr3_1:78541476-78541495 | Msa0377860:CDS | 30.0% | |
CTGCCAAATTATGTCATATA+AGG | - | chr3_1:78541653-78541672 | None:intergenic | 30.0% | |
! | AATGGAAAATTGTTGCTTGG+TGG | - | chr3_1:78536892-78536911 | None:intergenic | 35.0% |
GATGAGAATGAATGAAGAAG+AGG | - | chr3_1:78537037-78537056 | None:intergenic | 35.0% | |
TTTCATATTCTGAGCGATTG+GGG | - | chr3_1:78537072-78537091 | None:intergenic | 35.0% | |
TGAAGAGAAAATGTTGAGAC+TGG | - | chr3_1:78537184-78537203 | None:intergenic | 35.0% | |
CTAATAATTGAAGACGGAGA+AGG | - | chr3_1:78537267-78537286 | None:intergenic | 35.0% | |
CTTCTCCGTCTTCAATTATT+AGG | + | chr3_1:78537265-78537284 | Msa0377860:five_prime_UTR | 35.0% | |
CAACAAACAGAAACAAACTC+TGG | - | chr3_1:78537400-78537419 | None:intergenic | 35.0% | |
!! | AAGCTGTTTCTGTTTCTGTT+TGG | + | chr3_1:78537458-78537477 | Msa0377860:five_prime_UTR | 35.0% |
!! | AGCTGTTTCTGTTTCTGTTT+GGG | + | chr3_1:78537459-78537478 | Msa0377860:five_prime_UTR | 35.0% |
!! | TTTCTGTTTCTGTTTGGGTT+TGG | + | chr3_1:78537464-78537483 | Msa0377860:five_prime_UTR | 35.0% |
GTTCAGCAATGACATGAAAA+GGG | - | chr3_1:78537611-78537630 | None:intergenic | 35.0% | |
AGTTCAGCAATGACATGAAA+AGG | - | chr3_1:78537612-78537631 | None:intergenic | 35.0% | |
ACATTTACAAGTATGCTCCA+TGG | + | chr3_1:78537634-78537653 | Msa0377860:CDS | 35.0% | |
CATTTACAAGTATGCTCCAT+GGG | + | chr3_1:78537635-78537654 | Msa0377860:CDS | 35.0% | |
GATAAATCTTTGCTCAAGAG+TGG | + | chr3_1:78537780-78537799 | Msa0377860:intron | 35.0% | |
GCAATATTTCTTTCCAACAG+GGG | - | chr3_1:78537829-78537848 | None:intergenic | 35.0% | |
GTGCAATATTTCTTTCCAAC+AGG | - | chr3_1:78537831-78537850 | None:intergenic | 35.0% | |
GTTGGAAAGAAATATTGCAC+GGG | + | chr3_1:78537831-78537850 | Msa0377860:CDS | 35.0% | |
TGAACATAAGAATCAAGTGG+TGG | + | chr3_1:78537917-78537936 | Msa0377860:CDS | 35.0% | |
GAACATAAGAATCAAGTGGT+GGG | + | chr3_1:78537918-78537937 | Msa0377860:CDS | 35.0% | |
AACATAAGAATCAAGTGGTG+GGG | + | chr3_1:78537919-78537938 | Msa0377860:CDS | 35.0% | |
ATTCAAAGATGTCATACCTG+TGG | - | chr3_1:78538056-78538075 | None:intergenic | 35.0% | |
AGGTATGACATCTTTGAATG+AGG | + | chr3_1:78538057-78538076 | Msa0377860:intron | 35.0% | |
!! | TGTTTTGTTGGATGTACGTA+TGG | + | chr3_1:78538107-78538126 | Msa0377860:intron | 35.0% |
CTCAAGCTGTAAATGATTCA+TGG | + | chr3_1:78538292-78538311 | Msa0377860:intron | 35.0% | |
AGTAACATCCATACACACAA+TGG | - | chr3_1:78538458-78538477 | None:intergenic | 35.0% | |
!!! | ATTTTTTCCCAAAGGTCTGT+TGG | + | chr3_1:78538657-78538676 | Msa0377860:intron | 35.0% |
!!! | TTTTTTCCCAAAGGTCTGTT+GGG | + | chr3_1:78538658-78538677 | Msa0377860:intron | 35.0% |
!! | AGGGCTTTGAAAAAAATGGA+AGG | + | chr3_1:78538715-78538734 | Msa0377860:intron | 35.0% |
AAAAAAATGGAAGGATGGAG+TGG | + | chr3_1:78538724-78538743 | Msa0377860:intron | 35.0% | |
AACTAAACCCCTCCTAATTT+GGG | + | chr3_1:78538837-78538856 | Msa0377860:intron | 35.0% | |
! | AATTTGAGTTCCCCCAAATT+AGG | - | chr3_1:78538852-78538871 | None:intergenic | 35.0% |
!!! | TATTGGAGGAGTATTTTGGA+GGG | + | chr3_1:78538873-78538892 | Msa0377860:intron | 35.0% |
CCTAATACAAGTCCTCTTTA+GGG | - | chr3_1:78539085-78539104 | None:intergenic | 35.0% | |
CCTAAAGAGGACTTGTATTA+GGG | + | chr3_1:78539083-78539102 | Msa0377860:intron | 35.0% | |
!!! | TTGACTGTTTTAGCATGACT+TGG | + | chr3_1:78539126-78539145 | Msa0377860:intron | 35.0% |
! | GACTTGGTATATTCTTAGTC+TGG | + | chr3_1:78539142-78539161 | Msa0377860:intron | 35.0% |
! | AGAACTCCTATGTGATTTGT+AGG | + | chr3_1:78539246-78539265 | Msa0377860:intron | 35.0% |
! | GAACTCCTATGTGATTTGTA+GGG | + | chr3_1:78539247-78539266 | Msa0377860:intron | 35.0% |
! | TGTAGGGTATTTCAAAAGGA+AGG | + | chr3_1:78539263-78539282 | Msa0377860:CDS | 35.0% |
TCCCAGTCTTTCTCATTAAA+TGG | - | chr3_1:78539323-78539342 | None:intergenic | 35.0% | |
TTTCGACGATGAAAATGCAT+TGG | + | chr3_1:78539580-78539599 | Msa0377860:CDS | 35.0% | |
! | AGATCCATTGTTTTCATTCC+CGG | - | chr3_1:78539606-78539625 | None:intergenic | 35.0% |
GAATGAAAACAATGGATCTG+AGG | + | chr3_1:78539607-78539626 | Msa0377860:CDS | 35.0% | |
! | GCACTTTTAGTGTTATGCAA+GGG | + | chr3_1:78539902-78539921 | Msa0377860:intron | 35.0% |
! | TTATAGGTCATGTGGGTTTT+GGG | - | chr3_1:78540044-78540063 | None:intergenic | 35.0% |
! | TTTATAGGTCATGTGGGTTT+TGG | - | chr3_1:78540045-78540064 | None:intergenic | 35.0% |
ATATGACTACCTCCAATATC+TGG | + | chr3_1:78540279-78540298 | Msa0377860:intron | 35.0% | |
AAATGACTGTTCACCAGAAA+TGG | - | chr3_1:78540312-78540331 | None:intergenic | 35.0% | |
AAGATAACAAAGAGAAGGAG+AGG | - | chr3_1:78540358-78540377 | None:intergenic | 35.0% | |
TGCTATCTTTCATTTGCTCT+CGG | + | chr3_1:78540394-78540413 | Msa0377860:intron | 35.0% | |
AGTCTTAACAGTAGCATAAG+TGG | - | chr3_1:78540449-78540468 | None:intergenic | 35.0% | |
!! | TCATTGGTCTTAACATATGC+TGG | + | chr3_1:78540499-78540518 | Msa0377860:intron | 35.0% |
TGCAAGTGCAATTAATCAGA+AGG | - | chr3_1:78540726-78540745 | None:intergenic | 35.0% | |
TTAAATGTTCTACATGGCCT+AGG | + | chr3_1:78540776-78540795 | Msa0377860:intron | 35.0% | |
TGTCTGCTTCGTTGTTATAT+TGG | + | chr3_1:78540888-78540907 | Msa0377860:intron | 35.0% | |
CTTCGTTGTTATATTGGACT+TGG | + | chr3_1:78540894-78540913 | Msa0377860:intron | 35.0% | |
! | TTCAGCCTTCCAGTTTTTAA+TGG | - | chr3_1:78541118-78541137 | None:intergenic | 35.0% |
ATGTGATTATGTTCGACAGA+AGG | + | chr3_1:78541307-78541326 | Msa0377860:intron | 35.0% | |
AGGTCCTCAAAAATCTCATT+TGG | - | chr3_1:78541383-78541402 | None:intergenic | 35.0% | |
!! | AAATGAGATTTTTGAGGACC+TGG | + | chr3_1:78541382-78541401 | Msa0377860:CDS | 35.0% |
!! | AATGAGATTTTTGAGGACCT+GGG | + | chr3_1:78541383-78541402 | Msa0377860:CDS | 35.0% |
TATTAACAGCTTGGTTGGAT+TGG | + | chr3_1:78541409-78541428 | Msa0377860:CDS | 35.0% | |
AAGCAACTCAAAGAAATCAG+GGG | - | chr3_1:78541525-78541544 | None:intergenic | 35.0% | |
CAAGCAACTCAAAGAAATCA+GGG | - | chr3_1:78541526-78541545 | None:intergenic | 35.0% | |
TCAAGCAACTCAAAGAAATC+AGG | - | chr3_1:78541527-78541546 | None:intergenic | 35.0% | |
CCACATACAATGTCTTACAA+CGG | - | chr3_1:78541735-78541754 | None:intergenic | 35.0% | |
GCTTGATCACAGTTATTTGT+TGG | + | chr3_1:78541829-78541848 | Msa0377860:three_prime_UTR | 35.0% | |
! | AAAATTGTTGCTTGGTGGAG+GGG | - | chr3_1:78536887-78536906 | None:intergenic | 40.0% |
! | GAAAATTGTTGCTTGGTGGA+GGG | - | chr3_1:78536888-78536907 | None:intergenic | 40.0% |
ATGAAGAAGAGGAAGCTTAC+CGG | - | chr3_1:78537026-78537045 | None:intergenic | 40.0% | |
GAGAAAATGTTGAGACTGGA+AGG | - | chr3_1:78537180-78537199 | None:intergenic | 40.0% | |
AGAAGGAAGATCAAGTCCAA+TGG | - | chr3_1:78537250-78537269 | None:intergenic | 40.0% | |
! | GTTTGTTGAATTTGGGGGTT+TGG | + | chr3_1:78537412-78537431 | Msa0377860:five_prime_UTR | 40.0% |
! | TTTGGGGGTTTGGTAGTTTA+AGG | + | chr3_1:78537422-78537441 | Msa0377860:five_prime_UTR | 40.0% |
ATTACCAGCTCAACATCAGT+GGG | - | chr3_1:78537552-78537571 | None:intergenic | 40.0% | |
AGTTTCGTTGAATCCAAACC+TGG | - | chr3_1:78537666-78537685 | None:intergenic | 40.0% | |
! | TCAAGAGTGGTGATTTGCAA+TGG | + | chr3_1:78537793-78537812 | Msa0377860:CDS | 40.0% |
GAAAGAAATATTGCACGGGA+GGG | + | chr3_1:78537835-78537854 | Msa0377860:CDS | 40.0% | |
TAAAGGAGACCGAACTGATT+GGG | + | chr3_1:78537980-78537999 | Msa0377860:CDS | 40.0% | |
CATGCATAACCCAATCAGTT+CGG | - | chr3_1:78537992-78538011 | None:intergenic | 40.0% | |
CAAAACAGTTCGCAACCAAT+TGG | - | chr3_1:78538094-78538113 | None:intergenic | 40.0% | |
! | TTGGTTGCGAACTGTTTTGT+TGG | + | chr3_1:78538095-78538114 | Msa0377860:intron | 40.0% |
GATGTACGTATGGCGTTTAA+TGG | + | chr3_1:78538117-78538136 | Msa0377860:intron | 40.0% | |
TGGCTTTCACGTGTAACAAA+GGG | - | chr3_1:78538183-78538202 | None:intergenic | 40.0% | |
GGACAGTGAGAGTAATAAGA+TGG | - | chr3_1:78538370-78538389 | None:intergenic | 40.0% | |
! | TTTTTCCCAAAGGTCTGTTG+GGG | + | chr3_1:78538659-78538678 | Msa0377860:intron | 40.0% |
!! | GGAGAGGGCTTTGAAAAAAA+TGG | + | chr3_1:78538711-78538730 | Msa0377860:intron | 40.0% |
! | AAGGAATGAAGAGGTTTGGT+AGG | + | chr3_1:78538747-78538766 | Msa0377860:intron | 40.0% |
! | AGGAATGAAGAGGTTTGGTA+GGG | + | chr3_1:78538748-78538767 | Msa0377860:intron | 40.0% |
CAAATTAGGAGGGGTTTAGT+TGG | - | chr3_1:78538838-78538857 | None:intergenic | 40.0% | |
CAACTAAACCCCTCCTAATT+TGG | + | chr3_1:78538836-78538855 | Msa0377860:intron | 40.0% | |
ACTAAACCCCTCCTAATTTG+GGG | + | chr3_1:78538838-78538857 | Msa0377860:intron | 40.0% | |
TGGGGGAACTCAAATTGTAT+TGG | + | chr3_1:78538856-78538875 | Msa0377860:intron | 40.0% | |
GGGAACTCAAATTGTATTGG+AGG | + | chr3_1:78538859-78538878 | Msa0377860:intron | 40.0% | |
!!! | GTATTGGAGGAGTATTTTGG+AGG | + | chr3_1:78538872-78538891 | Msa0377860:intron | 40.0% |
!!! | AGGAGTATTTTGGAGGGTTT+TGG | + | chr3_1:78538879-78538898 | Msa0377860:intron | 40.0% |
CCCTAAAGAGGACTTGTATT+AGG | + | chr3_1:78539082-78539101 | Msa0377860:intron | 40.0% | |
CCCTAATACAAGTCCTCTTT+AGG | - | chr3_1:78539086-78539105 | None:intergenic | 40.0% | |
GTATTTCAAAAGGAAGGTCC+TGG | + | chr3_1:78539269-78539288 | Msa0377860:CDS | 40.0% | |
TCAGAAATATGGCTTGAGCT+AGG | - | chr3_1:78539416-78539435 | None:intergenic | 40.0% | |
ATCGTCGAAAATAGCAAGCA+TGG | - | chr3_1:78539570-78539589 | None:intergenic | 40.0% | |
AAGTCAGAGCTACCAAAGTT+GGG | - | chr3_1:78539690-78539709 | None:intergenic | 40.0% | |
AAAGTCAGAGCTACCAAAGT+TGG | - | chr3_1:78539691-78539710 | None:intergenic | 40.0% | |
AAAAAGAGGAACAGTTCACG+AGG | - | chr3_1:78539783-78539802 | None:intergenic | 40.0% | |
TGCTGAATTGCATGACACAT+TGG | + | chr3_1:78539880-78539899 | Msa0377860:intron | 40.0% | |
! | GGCACTTTTAGTGTTATGCA+AGG | + | chr3_1:78539901-78539920 | Msa0377860:intron | 40.0% |
ACCAATCTCATCACCAACAA+TGG | + | chr3_1:78539950-78539969 | Msa0377860:intron | 40.0% | |
AATGGAAGCTTGCCAGATAT+TGG | - | chr3_1:78540294-78540313 | None:intergenic | 40.0% | |
AGGAGAGGTTGCCAAAAATA+GGG | - | chr3_1:78540343-78540362 | None:intergenic | 40.0% | |
AAGGAGAGGTTGCCAAAAAT+AGG | - | chr3_1:78540344-78540363 | None:intergenic | 40.0% | |
GAGAGCAAATGAAAGATAGC+AGG | - | chr3_1:78540395-78540414 | None:intergenic | 40.0% | |
GGAAACTAAGACAAAAGAGG+TGG | - | chr3_1:78540599-78540618 | None:intergenic | 40.0% | |
TCCAATGTTCTAATGGCAGA+TGG | - | chr3_1:78540626-78540645 | None:intergenic | 40.0% | |
ACTCACTCCAAAGTGATTAG+TGG | + | chr3_1:78540750-78540769 | Msa0377860:intron | 40.0% | |
CTCACTCCAAAGTGATTAGT+GGG | + | chr3_1:78540751-78540770 | Msa0377860:intron | 40.0% | |
TCACTCCAAAGTGATTAGTG+GGG | + | chr3_1:78540752-78540771 | Msa0377860:intron | 40.0% | |
TTAAGCCCCACTAATCACTT+TGG | - | chr3_1:78540760-78540779 | None:intergenic | 40.0% | |
TGGGGCTTAAATGTTCTACA+TGG | + | chr3_1:78540770-78540789 | Msa0377860:intron | 40.0% | |
CGTTGTTATATTGGACTTGG+TGG | + | chr3_1:78540897-78540916 | Msa0377860:intron | 40.0% | |
!! | ACTGTCTCTTTTGTTTAGGG+AGG | + | chr3_1:78541036-78541055 | Msa0377860:intron | 40.0% |
!! | CTGTCTCTTTTGTTTAGGGA+GGG | + | chr3_1:78541037-78541056 | Msa0377860:intron | 40.0% |
GGAGATATTAACAGCTTGGT+TGG | + | chr3_1:78541404-78541423 | Msa0377860:CDS | 40.0% | |
AGCAACTCAAAGAAATCAGG+GGG | - | chr3_1:78541524-78541543 | None:intergenic | 40.0% | |
TGTTTAGTCTGCCAGGATAA+TGG | - | chr3_1:78541560-78541579 | None:intergenic | 40.0% | |
TTCTGAGTTACTTGACCTAG+AGG | + | chr3_1:78541591-78541610 | Msa0377860:three_prime_UTR | 40.0% | |
TGTTTAGTCTGCCAGGATAA+TGG | - | chr3_1:78541560-78541579 | None:intergenic | 40.0% | |
CCGTTGTAAGACATTGTATG+TGG | + | chr3_1:78541732-78541751 | Msa0377860:three_prime_UTR | 40.0% | |
! | GGAAAATTGTTGCTTGGTGG+AGG | - | chr3_1:78536889-78536908 | None:intergenic | 45.0% |
AGAGTGTATGAAGCACGGAA+GGG | - | chr3_1:78536950-78536969 | None:intergenic | 45.0% | |
! | GAGAGAGAGTGTATGAAGCA+CGG | - | chr3_1:78536955-78536974 | None:intergenic | 45.0% |
ACATAAAATCGCCTCGTTCG+CGG | + | chr3_1:78536983-78537002 | Msa0377860:five_prime_UTR | 45.0% | |
AAGAAAAGTCATCGGCACAG+TGG | - | chr3_1:78537123-78537142 | None:intergenic | 45.0% | |
TTGAGACTGGAAGGCTACAA+CGG | - | chr3_1:78537171-78537190 | None:intergenic | 45.0% | |
TGAATAACAATCGTCGCAGC+AGG | + | chr3_1:78537204-78537223 | Msa0377860:five_prime_UTR | 45.0% | |
GGAATATCTTCTTCCGCCAT+TGG | + | chr3_1:78537231-78537250 | Msa0377860:five_prime_UTR | 45.0% | |
AGGAAGATCAAGTCCAATGG+CGG | - | chr3_1:78537247-78537266 | None:intergenic | 45.0% | |
! | TGACATTGCTGTTGCGCTTA+AGG | + | chr3_1:78537373-78537392 | Msa0377860:five_prime_UTR | 45.0% |
TTACCAGCTCAACATCAGTG+GGG | - | chr3_1:78537551-78537570 | None:intergenic | 45.0% | |
CATTACCAGCTCAACATCAG+TGG | - | chr3_1:78537553-78537572 | None:intergenic | 45.0% | |
TGGTACTTCTTTACCCCTGT+TGG | + | chr3_1:78537813-78537832 | Msa0377860:CDS | 45.0% | |
GGAAAGAAATATTGCACGGG+AGG | + | chr3_1:78537834-78537853 | Msa0377860:CDS | 45.0% | |
ATGAATCGGGCAACAGAAGT+AGG | + | chr3_1:78537861-78537880 | Msa0377860:CDS | 45.0% | |
TGAATCGGGCAACAGAAGTA+GGG | + | chr3_1:78537862-78537881 | Msa0377860:CDS | 45.0% | |
!! | TAGGGTACTGGAAGACTACA+GGG | + | chr3_1:78537880-78537899 | Msa0377860:CDS | 45.0% |
TTTGCCAGTGTGAAACACCA+GGG | - | chr3_1:78537955-78537974 | None:intergenic | 45.0% | |
CAATCAGTTCGGTCTCCTTT+AGG | - | chr3_1:78537981-78538000 | None:intergenic | 45.0% | |
CTAAAGGAGACCGAACTGAT+TGG | + | chr3_1:78537979-78537998 | Msa0377860:CDS | 45.0% | |
GACAAAGACCTAGCTGACAA+TGG | + | chr3_1:78538026-78538045 | Msa0377860:CDS | 45.0% | |
! | CTGGCTTTCACGTGTAACAA+AGG | - | chr3_1:78538184-78538203 | None:intergenic | 45.0% |
! | AAGCACGCACGAAGTATCTA+CGG | - | chr3_1:78538318-78538337 | None:intergenic | 45.0% |
! | CGTGCTTACATAGCATTGAG+TGG | + | chr3_1:78538331-78538350 | Msa0377860:intron | 45.0% |
! | TTTTCCCAAAGGTCTGTTGG+GGG | + | chr3_1:78538660-78538679 | Msa0377860:intron | 45.0% |
TTGGGGGCTTATGGAGTTAT+GGG | + | chr3_1:78538676-78538695 | Msa0377860:intron | 45.0% | |
AAATGGAAGGATGGAGTGGA+AGG | + | chr3_1:78538728-78538747 | Msa0377860:intron | 45.0% | |
ATGGAGTGGAAGGAATGAAG+AGG | + | chr3_1:78538738-78538757 | Msa0377860:intron | 45.0% | |
GTGGAAGGAATGAAGAGGTT+TGG | + | chr3_1:78538743-78538762 | Msa0377860:intron | 45.0% | |
! | GGAATGAAGAGGTTTGGTAG+GGG | + | chr3_1:78538749-78538768 | Msa0377860:intron | 45.0% |
CTAAACCCCTCCTAATTTGG+GGG | + | chr3_1:78538839-78538858 | Msa0377860:intron | 45.0% | |
TGAGTTCCCCCAAATTAGGA+GGG | - | chr3_1:78538848-78538867 | None:intergenic | 45.0% | |
TTGAGTTCCCCCAAATTAGG+AGG | - | chr3_1:78538849-78538868 | None:intergenic | 45.0% | |
GTCTGTTCAGATGTTTCGAG+GGG | - | chr3_1:78539063-78539082 | None:intergenic | 45.0% | |
GGTCTGTTCAGATGTTTCGA+GGG | - | chr3_1:78539064-78539083 | None:intergenic | 45.0% | |
CATCTGAACAGACCCTAAAG+AGG | + | chr3_1:78539070-78539089 | Msa0377860:intron | 45.0% | |
CCAATACATCCACTTGCAGA+GGG | - | chr3_1:78539455-78539474 | None:intergenic | 45.0% | |
TCCAATACATCCACTTGCAG+AGG | - | chr3_1:78539456-78539475 | None:intergenic | 45.0% | |
CTATCAAGATTGATGCCCTC+TGG | + | chr3_1:78539494-78539513 | Msa0377860:CDS | 45.0% | |
CTTGATTGCCTAGAGCTGAA+GGG | - | chr3_1:78539529-78539548 | None:intergenic | 45.0% | |
! | GACGATGAAAATGCATTGGC+CGG | + | chr3_1:78539584-78539603 | Msa0377860:CDS | 45.0% |
! | ACGATGAAAATGCATTGGCC+GGG | + | chr3_1:78539585-78539604 | Msa0377860:CDS | 45.0% |
TTGGCCGGGAATGAAAACAA+TGG | + | chr3_1:78539599-78539618 | Msa0377860:CDS | 45.0% | |
AGTCAGAGCTACCAAAGTTG+GGG | - | chr3_1:78539689-78539708 | None:intergenic | 45.0% | |
TTAGTGTTATGCAAGGGCCA+TGG | + | chr3_1:78539908-78539927 | Msa0377860:intron | 45.0% | |
AGCAAGAATGGTAACCACCA+TGG | - | chr3_1:78539928-78539947 | None:intergenic | 45.0% | |
TGAGATTGGTGCAGCAAGAA+TGG | - | chr3_1:78539940-78539959 | None:intergenic | 45.0% | |
!! | GCCATTGTTGGTGATGAGAT+TGG | - | chr3_1:78539954-78539973 | None:intergenic | 45.0% |
AGAAATCGGATCATGAGCCA+TGG | + | chr3_1:78540009-78540028 | Msa0377860:intron | 45.0% | |
ATCTGGCAAGCTTCCATTTC+TGG | + | chr3_1:78540296-78540315 | Msa0377860:intron | 45.0% | |
!! | TAGCATAAGTGGACTAGTGG+AGG | - | chr3_1:78540438-78540457 | None:intergenic | 45.0% |
!! | CAGTAGCATAAGTGGACTAG+TGG | - | chr3_1:78540441-78540460 | None:intergenic | 45.0% |
! | ACATATGCTGGCAGTGCTTT+TGG | + | chr3_1:78540511-78540530 | Msa0377860:intron | 45.0% |
GTTCTAATGGCAGATGGCAT+AGG | - | chr3_1:78540620-78540639 | None:intergenic | 45.0% | |
GCCATCTGCCATTAGAACAT+TGG | + | chr3_1:78540622-78540641 | Msa0377860:intron | 45.0% | |
AAAAGATTGGGGGCAAGAAG+TGG | + | chr3_1:78540676-78540695 | Msa0377860:intron | 45.0% | |
! | TTTTCCTGCCTTCGACTAGA+AGG | - | chr3_1:78540702-78540721 | None:intergenic | 45.0% |
TTTGCACAAAAGGGGTAGCA+AGG | - | chr3_1:78540939-78540958 | None:intergenic | 45.0% | |
!! | CTTTTGTTTAGGGAGGGTGA+AGG | + | chr3_1:78541043-78541062 | Msa0377860:intron | 45.0% |
CCTCTGCCATCTTGATTAGT+AGG | - | chr3_1:78541160-78541179 | None:intergenic | 45.0% | |
CCTACTAATCAAGATGGCAG+AGG | + | chr3_1:78541157-78541176 | Msa0377860:intron | 45.0% | |
!! | CGACAGAAGGTTGATAATCC+TGG | + | chr3_1:78541320-78541339 | Msa0377860:intron | 45.0% |
CCAAGCTGTTAATATCTCCC+AGG | - | chr3_1:78541403-78541422 | None:intergenic | 45.0% | |
CCTGGGAGATATTAACAGCT+TGG | + | chr3_1:78541400-78541419 | Msa0377860:CDS | 45.0% | |
! | AGCTTGGTTGGATTGGATGA+TGG | + | chr3_1:78541416-78541435 | Msa0377860:CDS | 45.0% |
!! | GTTGGATTGGATGATGGAAG+CGG | + | chr3_1:78541422-78541441 | Msa0377860:CDS | 45.0% |
! | GATGGAAGCGGTTTTTCCTA+TGG | + | chr3_1:78541434-78541453 | Msa0377860:CDS | 45.0% |
GCAACTCAAAGAAATCAGGG+GGG | - | chr3_1:78541523-78541542 | None:intergenic | 45.0% | |
!! | CTTTGAGTTGCTTGACCTAG+AGG | + | chr3_1:78541532-78541551 | Msa0377860:CDS | 45.0% |
TCCTGGCAGACTAAACATGA+TGG | + | chr3_1:78541563-78541582 | Msa0377860:CDS | 45.0% | |
TCCTGGCAGACTAAACATGA+TGG | + | chr3_1:78541563-78541582 | Msa0377860:CDS | 45.0% | |
TCCATCATGTTTAGTCTGCC+AGG | - | chr3_1:78541626-78541645 | None:intergenic | 45.0% | |
!! | AATTATTATTAGTATTAATA+AGG | + | chr3_1:78538570-78538589 | Msa0377860:intron | 5.0% |
!! | ATTATTATTAGTATTAATAA+GGG | + | chr3_1:78538571-78538590 | Msa0377860:intron | 5.0% |
TCTTCCGGTGAGTGAGTAAG+AGG | - | chr3_1:78536853-78536872 | None:intergenic | 50.0% | |
! | GAGAGTGTATGAAGCACGGA+AGG | - | chr3_1:78536951-78536970 | None:intergenic | 50.0% |
GGTGCTTTCTCATCCTTCTC+CGG | + | chr3_1:78537004-78537023 | Msa0377860:five_prime_UTR | 50.0% | |
AAGAGGAAGCTTACCGGAGA+AGG | - | chr3_1:78537020-78537039 | None:intergenic | 50.0% | |
GAGCGATTGGGGAAAATGCA+TGG | - | chr3_1:78537061-78537080 | None:intergenic | 50.0% | |
! | GCTACAACGGATGGTGATGA+TGG | - | chr3_1:78537158-78537177 | None:intergenic | 50.0% |
TATGCTCCATGGGATCTACC+AGG | + | chr3_1:78537645-78537664 | Msa0377860:CDS | 50.0% | |
TCCATGGGATCTACCAGGTT+TGG | + | chr3_1:78537650-78537669 | Msa0377860:intron | 50.0% | |
TCCAAACCTGGTAGATCCCA+TGG | - | chr3_1:78537654-78537673 | None:intergenic | 50.0% | |
AGAAATATTGCACGGGAGGG+AGG | + | chr3_1:78537838-78537857 | Msa0377860:CDS | 50.0% | |
!! | GTAGGGTACTGGAAGACTAC+AGG | + | chr3_1:78537879-78537898 | Msa0377860:CDS | 50.0% |
GTACTGGAAGACTACAGGGA+AGG | + | chr3_1:78537884-78537903 | Msa0377860:CDS | 50.0% | |
GGAAGACTACAGGGAAGGAT+AGG | + | chr3_1:78537889-78537908 | Msa0377860:CDS | 50.0% | |
AGAACCCTGGTGTTTCACAC+TGG | + | chr3_1:78537948-78537967 | Msa0377860:CDS | 50.0% | |
CTTTGCCAGTGTGAAACACC+AGG | - | chr3_1:78537956-78537975 | None:intergenic | 50.0% | |
CACACTGGCAAAGCTCCTAA+AGG | + | chr3_1:78537963-78537982 | Msa0377860:CDS | 50.0% | |
GTGGAACACCATTGTCAGCT+AGG | - | chr3_1:78538037-78538056 | None:intergenic | 50.0% | |
AGCTGACAATGGTGTTCCAC+AGG | + | chr3_1:78538037-78538056 | Msa0377860:CDS | 50.0% | |
TAAGCCCCCAACAGACCTTT+GGG | - | chr3_1:78538667-78538686 | None:intergenic | 50.0% | |
ATAAGCCCCCAACAGACCTT+TGG | - | chr3_1:78538668-78538687 | None:intergenic | 50.0% | |
AAAGGTCTGTTGGGGGCTTA+TGG | + | chr3_1:78538667-78538686 | Msa0377860:intron | 50.0% | |
GTTGGGGGCTTATGGAGTTA+TGG | + | chr3_1:78538675-78538694 | Msa0377860:intron | 50.0% | |
TGGGGGCTTATGGAGTTATG+GGG | + | chr3_1:78538677-78538696 | Msa0377860:intron | 50.0% | |
GCTTATGGAGTTATGGGGGA+GGG | + | chr3_1:78538682-78538701 | Msa0377860:intron | 50.0% | |
CTTATGGAGTTATGGGGGAG+GGG | + | chr3_1:78538683-78538702 | Msa0377860:intron | 50.0% | |
! | ATGAAGAGGTTTGGTAGGGG+AGG | + | chr3_1:78538752-78538771 | Msa0377860:intron | 50.0% |
! | TGAAGAGGTTTGGTAGGGGA+GGG | + | chr3_1:78538753-78538772 | Msa0377860:intron | 50.0% |
GAGGGGTTTAGTTGGTCCTT+GGG | - | chr3_1:78538830-78538849 | None:intergenic | 50.0% | |
GAGTTCCCCCAAATTAGGAG+GGG | - | chr3_1:78538847-78538866 | None:intergenic | 50.0% | |
TTCAGATGTTTCGAGGGGAG+AGG | - | chr3_1:78539058-78539077 | None:intergenic | 50.0% | |
GGGTCTGTTCAGATGTTTCG+AGG | - | chr3_1:78539065-78539084 | None:intergenic | 50.0% | |
CCATACTGTGCACCATTCCT+GGG | - | chr3_1:78539296-78539315 | None:intergenic | 50.0% | |
TCCATACTGTGCACCATTCC+TGG | - | chr3_1:78539297-78539316 | None:intergenic | 50.0% | |
GAAAGACTGGGATAGCGAAG+AGG | + | chr3_1:78539331-78539350 | Msa0377860:CDS | 50.0% | |
GAGCTAGGTAGAATGAGAGC+TGG | - | chr3_1:78539401-78539420 | None:intergenic | 50.0% | |
CCCTCTGCAAGTGGATGTAT+TGG | + | chr3_1:78539452-78539471 | Msa0377860:CDS | 50.0% | |
ATGACACACCCTTCAGCTCT+AGG | + | chr3_1:78539518-78539537 | Msa0377860:CDS | 50.0% | |
GCTTGATTGCCTAGAGCTGA+AGG | - | chr3_1:78539530-78539549 | None:intergenic | 50.0% | |
!! | TACCAAAGTTGGGGAGCATC+TGG | - | chr3_1:78539680-78539699 | None:intergenic | 50.0% |
CTCATCACCAACAATGGCGA+TGG | + | chr3_1:78539956-78539975 | Msa0377860:intron | 50.0% | |
CAATCTGCCATCGCCATTGT+TGG | - | chr3_1:78539966-78539985 | None:intergenic | 50.0% | |
!! | GTTTTGGGTCTGTCTAGCCA+TGG | - | chr3_1:78540029-78540048 | None:intergenic | 50.0% |
GGAAGCTTGCCAGATATTGG+AGG | - | chr3_1:78540291-78540310 | None:intergenic | 50.0% | |
AGAAGTGGCCTTCTAGTCGA+AGG | + | chr3_1:78540691-78540710 | Msa0377860:intron | 50.0% | |
!! | ACCTAGAGGTGCCATTATCC+TGG | + | chr3_1:78541546-78541565 | Msa0377860:CDS | 50.0% |
GCCATCATGTTTAGTCTGCC+AGG | - | chr3_1:78541567-78541586 | None:intergenic | 50.0% | |
!! | ACCTAGAGGTGCCATTATCC+TGG | + | chr3_1:78541546-78541565 | Msa0377860:CDS | 50.0% |
TCCGGTGAGTGAGTAAGAGG+TGG | - | chr3_1:78536850-78536869 | None:intergenic | 55.0% | |
GGGGTTGCTTCTCTCTCTTC+CGG | - | chr3_1:78536868-78536887 | None:intergenic | 55.0% | |
!! | ATGAGAAAGCACCGCGAACG+AGG | - | chr3_1:78536997-78537016 | None:intergenic | 55.0% |
GACTGGAAGGCTACAACGGA+TGG | - | chr3_1:78537167-78537186 | None:intergenic | 55.0% | |
ACAATCGTCGCAGCAGGCTT+TGG | + | chr3_1:78537210-78537229 | Msa0377860:five_prime_UTR | 55.0% | |
GTGGGGTGAAAACGAAACCC+TGG | - | chr3_1:78537534-78537553 | None:intergenic | 55.0% | |
TCACCCCACTGATGTTGAGC+TGG | + | chr3_1:78537545-78537564 | Msa0377860:CDS | 55.0% | |
GGGCAACAGAAGTAGGGTAC+TGG | + | chr3_1:78537868-78537887 | Msa0377860:CDS | 55.0% | |
GGTGGGGATGATAAGAACCC+TGG | + | chr3_1:78537935-78537954 | Msa0377860:CDS | 55.0% | |
GGGGGCTTATGGAGTTATGG+GGG | + | chr3_1:78538678-78538697 | Msa0377860:intron | 55.0% | |
GGCTTATGGAGTTATGGGGG+AGG | + | chr3_1:78538681-78538700 | Msa0377860:intron | 55.0% | |
GTTTGGTAGGGGAGGGCTTT+GGG | + | chr3_1:78538760-78538779 | Msa0377860:intron | 55.0% | |
TTTGGTAGGGGAGGGCTTTG+GGG | + | chr3_1:78538761-78538780 | Msa0377860:intron | 55.0% | |
GAAACTTGGTATCCGGCCCA+AGG | + | chr3_1:78538811-78538830 | Msa0377860:intron | 55.0% | |
GGTTTAGTTGGTCCTTGGGC+CGG | - | chr3_1:78538826-78538845 | None:intergenic | 55.0% | |
GGAGGGGTTTAGTTGGTCCT+TGG | - | chr3_1:78538831-78538850 | None:intergenic | 55.0% | |
GATGTTTCGAGGGGAGAGGA+TGG | - | chr3_1:78539054-78539073 | None:intergenic | 55.0% | |
AAAAGGAAGGTCCTGGTCCC+AGG | + | chr3_1:78539276-78539295 | Msa0377860:CDS | 55.0% | |
CCCAGGAATGGTGCACAGTA+TGG | + | chr3_1:78539293-78539312 | Msa0377860:CDS | 55.0% | |
GTGCAGACACAGCAGCAACA+GGG | - | chr3_1:78539379-78539398 | None:intergenic | 55.0% | |
GACATGCATCCCTCTGCAAG+TGG | + | chr3_1:78539443-78539462 | Msa0377860:CDS | 55.0% | |
! | GAAGGGTGTGTCATGCCAGA+GGG | - | chr3_1:78539512-78539531 | None:intergenic | 55.0% |
! | TGAAGGGTGTGTCATGCCAG+AGG | - | chr3_1:78539513-78539532 | None:intergenic | 55.0% |
TGCCAGATGCTCCCCAACTT+TGG | + | chr3_1:78539675-78539694 | Msa0377860:intron | 55.0% | |
GTGTTATGCAAGGGCCATGG+TGG | + | chr3_1:78539911-78539930 | Msa0377860:intron | 55.0% | |
! | GCCAGGATAATGGCACCTCT+AGG | - | chr3_1:78541550-78541569 | None:intergenic | 55.0% |
! | GCCAGGATAATGGCACCTCT+AGG | - | chr3_1:78541550-78541569 | None:intergenic | 55.0% |
GCACGGGAGGGAGGATGAAT+CGG | + | chr3_1:78537847-78537866 | Msa0377860:CDS | 60.0% | |
CACGGGAGGGAGGATGAATC+GGG | + | chr3_1:78537848-78537867 | Msa0377860:CDS | 60.0% | |
AGTTATGGGGGAGGGGAGAG+AGG | + | chr3_1:78538690-78538709 | Msa0377860:intron | 60.0% | |
! | GGTTTGGTAGGGGAGGGCTT+TGG | + | chr3_1:78538759-78538778 | Msa0377860:intron | 60.0% |
!! | GAGAGGATGGCTTTGGGAGC+AGG | - | chr3_1:78539041-78539060 | None:intergenic | 60.0% |
CGAGGGGAGAGGATGGCTTT+GGG | - | chr3_1:78539047-78539066 | None:intergenic | 60.0% | |
TCGAGGGGAGAGGATGGCTT+TGG | - | chr3_1:78539048-78539067 | None:intergenic | 60.0% | |
GAAGGTCCTGGTCCCAGGAA+TGG | + | chr3_1:78539281-78539300 | Msa0377860:CDS | 60.0% | |
TGTGCACCATTCCTGGGACC+AGG | - | chr3_1:78539290-78539309 | None:intergenic | 60.0% | |
GGTGCAGACACAGCAGCAAC+AGG | - | chr3_1:78539380-78539399 | None:intergenic | 60.0% | |
GTGGCCTTCTAGTCGAAGGC+AGG | + | chr3_1:78540695-78540714 | Msa0377860:intron | 60.0% | |
TGGGGGAGGGGAGAGAGGAG+AGG | + | chr3_1:78538695-78538714 | Msa0377860:intron | 70.0% | |
GGGGGAGGGGAGAGAGGAGA+GGG | + | chr3_1:78538696-78538715 | Msa0377860:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_1 | gene | 78536847 | 78541866 | 78536847 | ID=Msa0377860;Name=Msa0377860 |
chr3_1 | mRNA | 78536847 | 78541866 | 78536847 | ID=Msa0377860-mRNA-1;Parent=Msa0377860;Name=Msa0377860-mRNA-1;_AED=0.03;_eAED=0.03;_QI=570|1|1|1|0.75|0.6|5|277|360 |
chr3_1 | exon | 78536847 | 78537025 | 78536847 | ID=Msa0377860-mRNA-1:exon:18915;Parent=Msa0377860-mRNA-1 |
chr3_1 | exon | 78537116 | 78537666 | 78537116 | ID=Msa0377860-mRNA-1:exon:18916;Parent=Msa0377860-mRNA-1 |
chr3_1 | exon | 78537781 | 78538058 | 78537781 | ID=Msa0377860-mRNA-1:exon:18917;Parent=Msa0377860-mRNA-1 |
chr3_1 | exon | 78539248 | 78539628 | 78539248 | ID=Msa0377860-mRNA-1:exon:18918;Parent=Msa0377860-mRNA-1 |
chr3_1 | exon | 78541326 | 78541866 | 78541326 | ID=Msa0377860-mRNA-1:exon:18919;Parent=Msa0377860-mRNA-1 |
chr3_1 | five_prime_UTR | 78536847 | 78537025 | 78536847 | ID=Msa0377860-mRNA-1:five_prime_utr;Parent=Msa0377860-mRNA-1 |
chr3_1 | five_prime_UTR | 78537116 | 78537506 | 78537116 | ID=Msa0377860-mRNA-1:five_prime_utr;Parent=Msa0377860-mRNA-1 |
chr3_1 | CDS | 78537507 | 78537666 | 78537507 | ID=Msa0377860-mRNA-1:cds;Parent=Msa0377860-mRNA-1 |
chr3_1 | CDS | 78537781 | 78538058 | 78537781 | ID=Msa0377860-mRNA-1:cds;Parent=Msa0377860-mRNA-1 |
chr3_1 | CDS | 78539248 | 78539628 | 78539248 | ID=Msa0377860-mRNA-1:cds;Parent=Msa0377860-mRNA-1 |
chr3_1 | CDS | 78541326 | 78541589 | 78541326 | ID=Msa0377860-mRNA-1:cds;Parent=Msa0377860-mRNA-1 |
chr3_1 | three_prime_UTR | 78541590 | 78541866 | 78541590 | ID=Msa0377860-mRNA-1:three_prime_utr;Parent=Msa0377860-mRNA-1 |
Gene Sequence |
Protein sequence |