Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0518090 | XP_003602603.1 | 92.500 | 360 | 24 | 1 | 1 | 360 | 1 | 357 | 0.0 | 690 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0518090 | sp|Q9FY82|NAC82_ARATH | 47.866 | 328 | 135 | 9 | 1 | 305 | 1 | 315 | 3.44e-90 | 282 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0518090 | G7JBJ4 | 92.500 | 360 | 24 | 1 | 1 | 360 | 1 | 357 | 0.0 | 690 |
Gene ID | Type | Classification |
---|---|---|
Msa0518090 | TF | NAC |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0014410 | Msa0518090 | -0.818708 | 1.702201e-52 | -8.615850e-47 |
Msa0377860 | Msa0518090 | 0.934478 | 3.795669e-96 | -8.615850e-47 |
Msa0377930 | Msa0518090 | 0.952113 | 4.868018e-110 | -8.615850e-47 |
Msa0473850 | Msa0518090 | 0.970870 | 2.804368e-132 | -8.615850e-47 |
Msa0518090 | Msa1313050 | -0.817762 | 2.787659e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0518090 | MtrunA17_Chr3g0130101 | 92.500 | 360 | 24 | 1 | 1 | 360 | 1 | 357 | 0.0 | 690 |
Msa0518090 | MtrunA17_Chr8g0364791 | 65.106 | 235 | 76 | 3 | 1 | 235 | 1 | 229 | 2.83e-106 | 319 |
Msa0518090 | MtrunA17_Chr8g0384201 | 64.255 | 235 | 78 | 3 | 1 | 235 | 1 | 229 | 8.60e-106 | 319 |
Msa0518090 | MtrunA17_Chr3g0092671 | 57.143 | 175 | 73 | 2 | 9 | 182 | 7 | 180 | 1.98e-68 | 224 |
Msa0518090 | MtrunA17_Chr1g0201021 | 50.754 | 199 | 93 | 1 | 1 | 194 | 13 | 211 | 4.42e-68 | 224 |
Msa0518090 | MtrunA17_Chr1g0197361 | 54.872 | 195 | 80 | 4 | 9 | 201 | 10 | 198 | 8.68e-68 | 223 |
Msa0518090 | MtrunA17_Chr1g0197351 | 56.742 | 178 | 70 | 2 | 7 | 178 | 42 | 218 | 2.90e-63 | 209 |
Msa0518090 | MtrunA17_Chr6g0481091 | 57.616 | 151 | 64 | 0 | 9 | 159 | 8 | 158 | 8.81e-61 | 195 |
Msa0518090 | MtrunA17_Chr3g0109821 | 55.215 | 163 | 69 | 3 | 9 | 168 | 8 | 169 | 8.07e-57 | 196 |
Msa0518090 | MtrunA17_Chr5g0433781 | 53.704 | 162 | 74 | 1 | 9 | 169 | 8 | 169 | 8.34e-57 | 195 |
Msa0518090 | MtrunA17_Chr2g0309891 | 55.333 | 150 | 66 | 1 | 9 | 157 | 8 | 157 | 4.58e-56 | 186 |
Msa0518090 | MtrunA17_Chr4g0060931 | 51.592 | 157 | 72 | 2 | 9 | 163 | 19 | 173 | 1.71e-50 | 172 |
Msa0518090 | MtrunA17_Chr5g0428991 | 39.453 | 256 | 144 | 5 | 10 | 259 | 28 | 278 | 2.85e-50 | 177 |
Msa0518090 | MtrunA17_Chr4g0018391 | 51.656 | 151 | 68 | 3 | 9 | 157 | 9 | 156 | 4.67e-50 | 171 |
Msa0518090 | MtrunA17_Chr3g0128151 | 43.961 | 207 | 96 | 3 | 10 | 209 | 25 | 218 | 5.27e-50 | 176 |
Msa0518090 | MtrunA17_Chr2g0309331 | 51.974 | 152 | 69 | 3 | 9 | 158 | 12 | 161 | 1.44e-49 | 169 |
Msa0518090 | MtrunA17_Chr1g0200561 | 49.686 | 159 | 75 | 3 | 9 | 165 | 21 | 176 | 1.57e-49 | 169 |
Msa0518090 | MtrunA17_Chr3g0091921 | 51.250 | 160 | 74 | 2 | 6 | 163 | 15 | 172 | 2.02e-49 | 168 |
Msa0518090 | MtrunA17_Chr8g0372121 | 41.346 | 208 | 109 | 5 | 9 | 214 | 8 | 204 | 4.62e-49 | 167 |
Msa0518090 | MtrunA17_Chr5g0400461 | 46.286 | 175 | 84 | 2 | 9 | 176 | 8 | 179 | 5.40e-49 | 167 |
Msa0518090 | MtrunA17_Chr3g0124761 | 49.383 | 162 | 76 | 3 | 1 | 159 | 1 | 159 | 5.76e-49 | 166 |
Msa0518090 | MtrunA17_Chr2g0316971 | 53.165 | 158 | 66 | 4 | 9 | 161 | 25 | 179 | 2.20e-48 | 167 |
Msa0518090 | MtrunA17_Chr4g0054791 | 39.474 | 228 | 114 | 4 | 9 | 212 | 8 | 235 | 2.93e-48 | 165 |
Msa0518090 | MtrunA17_Chr3g0128111 | 48.000 | 150 | 78 | 0 | 8 | 157 | 43 | 192 | 4.35e-48 | 162 |
Msa0518090 | MtrunA17_Chr5g0405211 | 49.669 | 151 | 71 | 3 | 9 | 157 | 10 | 157 | 5.00e-48 | 166 |
Msa0518090 | MtrunA17_Chr6g0484441 | 51.678 | 149 | 68 | 2 | 9 | 157 | 7 | 151 | 7.42e-48 | 164 |
Msa0518090 | MtrunA17_Chr4g0017921 | 50.331 | 151 | 71 | 2 | 9 | 158 | 10 | 157 | 1.02e-47 | 165 |
Msa0518090 | MtrunA17_Chr2g0318081 | 47.651 | 149 | 76 | 1 | 9 | 157 | 18 | 164 | 1.30e-47 | 164 |
Msa0518090 | MtrunA17_Chr4g0056541 | 50.993 | 151 | 69 | 3 | 9 | 157 | 9 | 156 | 1.61e-47 | 164 |
Msa0518090 | MtrunA17_Chr7g0252971 | 45.062 | 162 | 74 | 3 | 9 | 157 | 10 | 169 | 4.82e-47 | 162 |
Msa0518090 | MtrunA17_Chr7g0253011 | 51.282 | 156 | 66 | 4 | 9 | 157 | 19 | 171 | 6.01e-47 | 164 |
Msa0518090 | MtrunA17_Chr6g0453451 | 46.154 | 169 | 83 | 3 | 9 | 173 | 22 | 186 | 1.40e-46 | 161 |
Msa0518090 | MtrunA17_Chr8g0361731 | 45.732 | 164 | 76 | 4 | 5 | 157 | 12 | 173 | 1.52e-45 | 160 |
Msa0518090 | MtrunA17_Chr7g0263931 | 32.955 | 264 | 142 | 6 | 9 | 266 | 13 | 247 | 2.38e-45 | 158 |
Msa0518090 | MtrunA17_Chr3g0139331 | 48.408 | 157 | 75 | 3 | 9 | 163 | 13 | 165 | 3.81e-45 | 158 |
Msa0518090 | MtrunA17_Chr6g0453131 | 45.963 | 161 | 75 | 4 | 7 | 157 | 15 | 173 | 7.28e-45 | 158 |
Msa0518090 | MtrunA17_Chr5g0417791 | 47.403 | 154 | 75 | 2 | 9 | 158 | 5 | 156 | 1.93e-44 | 154 |
Msa0518090 | MtrunA17_Chr2g0318101 | 45.062 | 162 | 74 | 4 | 9 | 157 | 17 | 176 | 3.34e-44 | 155 |
Msa0518090 | MtrunA17_Chr4g0076731 | 45.570 | 158 | 81 | 3 | 3 | 159 | 50 | 203 | 4.55e-44 | 157 |
Msa0518090 | MtrunA17_Chr5g0398971 | 46.405 | 153 | 75 | 5 | 9 | 157 | 9 | 158 | 7.67e-44 | 154 |
Msa0518090 | MtrunA17_Chr7g0217721 | 43.503 | 177 | 82 | 4 | 10 | 170 | 22 | 196 | 1.05e-43 | 154 |
Msa0518090 | MtrunA17_Chr4g0042561 | 44.586 | 157 | 81 | 3 | 9 | 161 | 11 | 165 | 1.47e-43 | 151 |
Msa0518090 | MtrunA17_Chr5g0417001 | 44.172 | 163 | 79 | 4 | 5 | 157 | 12 | 172 | 2.51e-43 | 154 |
Msa0518090 | MtrunA17_Chr8g0359921 | 47.020 | 151 | 76 | 2 | 9 | 157 | 16 | 164 | 3.30e-43 | 152 |
Msa0518090 | MtrunA17_Chr7g0214071 | 47.561 | 164 | 71 | 5 | 9 | 167 | 17 | 170 | 4.17e-43 | 150 |
Msa0518090 | MtrunA17_Chr2g0326361 | 47.097 | 155 | 74 | 4 | 9 | 157 | 16 | 168 | 7.29e-43 | 151 |
Msa0518090 | MtrunA17_Chr4g0047841 | 43.182 | 176 | 73 | 4 | 7 | 157 | 15 | 188 | 7.56e-43 | 152 |
Msa0518090 | MtrunA17_Chr4g0038751 | 45.000 | 160 | 78 | 4 | 1 | 157 | 9 | 161 | 1.41e-42 | 150 |
Msa0518090 | MtrunA17_Chr8g0384721 | 45.806 | 155 | 77 | 3 | 9 | 159 | 9 | 160 | 1.79e-42 | 149 |
Msa0518090 | MtrunA17_Chr6g0461661 | 46.405 | 153 | 74 | 4 | 10 | 157 | 21 | 170 | 3.11e-42 | 151 |
Msa0518090 | MtrunA17_Chr8g0346001 | 43.125 | 160 | 81 | 2 | 9 | 158 | 17 | 176 | 3.64e-42 | 152 |
Msa0518090 | MtrunA17_Chr1g0147421 | 48.052 | 154 | 73 | 4 | 9 | 159 | 29 | 178 | 1.00e-41 | 149 |
Msa0518090 | MtrunA17_Chr3g0130731 | 46.104 | 154 | 77 | 3 | 9 | 159 | 9 | 159 | 1.63e-41 | 147 |
Msa0518090 | MtrunA17_Chr2g0312321 | 47.531 | 162 | 71 | 5 | 1 | 157 | 6 | 158 | 2.35e-41 | 147 |
Msa0518090 | MtrunA17_Chr7g0217711 | 48.889 | 135 | 67 | 1 | 10 | 144 | 22 | 154 | 6.26e-40 | 139 |
Msa0518090 | MtrunA17_Chr1g0183741 | 45.033 | 151 | 75 | 3 | 9 | 157 | 12 | 156 | 1.49e-39 | 141 |
Msa0518090 | MtrunA17_Chr7g0261411 | 44.667 | 150 | 75 | 3 | 9 | 156 | 12 | 155 | 9.19e-38 | 137 |
Msa0518090 | MtrunA17_Chr5g0442771 | 40.719 | 167 | 85 | 3 | 3 | 157 | 14 | 178 | 1.28e-37 | 137 |
Msa0518090 | MtrunA17_Chr8g0345671 | 47.297 | 148 | 69 | 5 | 10 | 154 | 14 | 155 | 1.91e-37 | 139 |
Msa0518090 | MtrunA17_Chr2g0311651 | 41.212 | 165 | 81 | 3 | 8 | 157 | 23 | 186 | 3.41e-37 | 136 |
Msa0518090 | MtrunA17_Chr2g0321741 | 46.875 | 128 | 60 | 2 | 27 | 154 | 12 | 131 | 4.41e-37 | 137 |
Msa0518090 | MtrunA17_Chr8g0385991 | 41.071 | 168 | 84 | 4 | 9 | 169 | 16 | 175 | 6.71e-37 | 133 |
Msa0518090 | MtrunA17_Chr8g0345691 | 43.624 | 149 | 75 | 5 | 10 | 155 | 15 | 157 | 8.41e-36 | 134 |
Msa0518090 | MtrunA17_Chr3g0144271 | 44.295 | 149 | 71 | 5 | 9 | 154 | 25 | 164 | 1.21e-35 | 134 |
Msa0518090 | MtrunA17_Chr2g0311661 | 40.606 | 165 | 82 | 4 | 8 | 157 | 22 | 185 | 3.56e-35 | 130 |
Msa0518090 | MtrunA17_Chr3g0131911 | 40.719 | 167 | 85 | 3 | 9 | 165 | 16 | 178 | 2.53e-34 | 126 |
Msa0518090 | MtrunA17_Chr8g0345711 | 46.825 | 126 | 63 | 3 | 10 | 132 | 15 | 139 | 9.55e-34 | 123 |
Msa0518090 | MtrunA17_Chr2g0321631 | 39.355 | 155 | 86 | 6 | 9 | 155 | 6 | 160 | 3.80e-30 | 115 |
Msa0518090 | MtrunA17_Chr4g0026141 | 38.217 | 157 | 90 | 5 | 6 | 155 | 4 | 160 | 3.86e-30 | 116 |
Msa0518090 | MtrunA17_Chr8g0345741 | 42.857 | 140 | 71 | 5 | 20 | 156 | 4 | 137 | 1.22e-29 | 111 |
Msa0518090 | MtrunA17_Chr3g0113001 | 44.167 | 120 | 64 | 1 | 57 | 173 | 13 | 132 | 2.27e-29 | 115 |
Msa0518090 | MtrunA17_Chr7g0266701 | 33.036 | 224 | 127 | 9 | 7 | 211 | 4 | 223 | 3.34e-29 | 113 |
Msa0518090 | MtrunA17_Chr8g0345731 | 44.186 | 129 | 65 | 4 | 10 | 132 | 27 | 154 | 1.49e-28 | 109 |
Msa0518090 | MtrunA17_Chr8g0345721 | 38.272 | 162 | 64 | 5 | 10 | 136 | 38 | 198 | 3.59e-27 | 106 |
Msa0518090 | MtrunA17_Chr4g0050701 | 38.125 | 160 | 77 | 6 | 9 | 158 | 13 | 160 | 1.08e-26 | 104 |
Msa0518090 | MtrunA17_Chr8g0345701 | 43.243 | 148 | 63 | 6 | 3 | 132 | 2 | 146 | 1.41e-26 | 103 |
Msa0518090 | MtrunA17_Chr3g0113031 | 45.631 | 103 | 51 | 2 | 73 | 170 | 4 | 106 | 1.05e-25 | 104 |
Msa0518090 | MtrunA17_Chr8g0384351 | 36.250 | 160 | 76 | 7 | 9 | 166 | 12 | 147 | 2.59e-20 | 87.4 |
Msa0518090 | MtrunA17_Chr7g0243371 | 48.750 | 80 | 39 | 1 | 57 | 134 | 12 | 91 | 4.45e-19 | 82.0 |
Msa0518090 | MtrunA17_Chr3g0130321 | 33.516 | 182 | 98 | 8 | 1 | 168 | 1 | 173 | 4.60e-19 | 84.7 |
Msa0518090 | MtrunA17_Chr7g0251651 | 29.851 | 134 | 89 | 4 | 1 | 132 | 11 | 141 | 2.12e-14 | 71.2 |
Msa0518090 | MtrunA17_Chr7g0251661 | 29.839 | 124 | 83 | 3 | 10 | 132 | 13 | 133 | 3.47e-13 | 66.6 |
Msa0518090 | MtrunA17_Chr1g0194791 | 60.870 | 46 | 17 | 1 | 9 | 53 | 48 | 93 | 4.78e-13 | 64.7 |
Msa0518090 | MtrunA17_Chr7g0274971 | 34.194 | 155 | 84 | 10 | 13 | 157 | 11 | 157 | 1.43e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0518090 | AT5G09330.5 | 47.866 | 328 | 135 | 9 | 1 | 305 | 1 | 315 | 3.49e-91 | 282 |
Msa0518090 | AT5G09330.2 | 47.866 | 328 | 135 | 9 | 1 | 305 | 1 | 315 | 3.49e-91 | 282 |
Msa0518090 | AT5G09330.4 | 47.866 | 328 | 135 | 9 | 1 | 305 | 1 | 315 | 3.49e-91 | 282 |
Msa0518090 | AT5G09330.3 | 47.866 | 328 | 135 | 9 | 1 | 305 | 1 | 315 | 3.49e-91 | 282 |
Msa0518090 | AT5G09330.1 | 47.866 | 328 | 135 | 9 | 1 | 305 | 1 | 315 | 3.49e-91 | 282 |
Msa0518090 | AT5G64060.1 | 55.042 | 238 | 99 | 3 | 1 | 238 | 1 | 230 | 6.33e-88 | 269 |
Msa0518090 | AT5G04410.1 | 61.538 | 182 | 69 | 1 | 7 | 188 | 9 | 189 | 1.26e-78 | 251 |
Msa0518090 | AT3G10500.1 | 63.253 | 166 | 61 | 0 | 7 | 172 | 9 | 174 | 2.04e-74 | 240 |
Msa0518090 | AT1G34190.1 | 47.867 | 211 | 109 | 1 | 5 | 215 | 14 | 223 | 1.11e-67 | 223 |
Msa0518090 | AT3G10480.2 | 56.725 | 171 | 73 | 1 | 7 | 177 | 27 | 196 | 8.84e-65 | 212 |
Msa0518090 | AT3G10480.1 | 56.977 | 172 | 72 | 2 | 7 | 177 | 27 | 197 | 1.40e-64 | 212 |
Msa0518090 | AT3G10490.1 | 55.114 | 176 | 77 | 2 | 7 | 181 | 27 | 201 | 3.52e-64 | 204 |
Msa0518090 | AT3G10490.2 | 55.114 | 176 | 77 | 2 | 7 | 181 | 27 | 201 | 5.10e-63 | 208 |
Msa0518090 | AT1G34180.3 | 50.267 | 187 | 92 | 1 | 5 | 190 | 14 | 200 | 1.36e-62 | 207 |
Msa0518090 | AT1G34180.1 | 50.267 | 187 | 92 | 1 | 5 | 190 | 14 | 200 | 1.03e-61 | 207 |
Msa0518090 | AT3G17730.1 | 58.278 | 151 | 63 | 0 | 9 | 159 | 8 | 158 | 2.94e-60 | 194 |
Msa0518090 | AT1G34180.4 | 47.236 | 199 | 92 | 2 | 5 | 190 | 14 | 212 | 1.94e-59 | 199 |
Msa0518090 | AT3G10480.3 | 48.293 | 205 | 71 | 3 | 7 | 177 | 27 | 230 | 3.30e-59 | 200 |
Msa0518090 | AT1G65910.1 | 52.273 | 176 | 83 | 1 | 7 | 181 | 6 | 181 | 1.13e-58 | 201 |
Msa0518090 | AT1G34180.2 | 47.236 | 199 | 92 | 2 | 5 | 190 | 14 | 212 | 1.47e-58 | 199 |
Msa0518090 | AT1G33060.1 | 54.054 | 148 | 68 | 0 | 10 | 157 | 27 | 174 | 1.76e-54 | 189 |
Msa0518090 | AT1G33060.2 | 54.054 | 148 | 68 | 0 | 10 | 157 | 27 | 174 | 1.82e-54 | 189 |
Msa0518090 | AT3G03200.1 | 55.333 | 150 | 66 | 1 | 9 | 157 | 8 | 157 | 6.40e-54 | 185 |
Msa0518090 | AT5G24590.2 | 46.860 | 207 | 92 | 5 | 10 | 215 | 16 | 205 | 1.14e-53 | 183 |
Msa0518090 | AT5G17260.1 | 52.667 | 150 | 70 | 1 | 9 | 157 | 8 | 157 | 8.45e-53 | 182 |
Msa0518090 | AT2G27300.1 | 53.378 | 148 | 61 | 2 | 7 | 154 | 14 | 153 | 1.21e-52 | 177 |
Msa0518090 | AT3G49530.2 | 51.333 | 150 | 72 | 1 | 10 | 158 | 16 | 165 | 4.00e-51 | 176 |
Msa0518090 | AT4G35580.1 | 54.054 | 148 | 68 | 0 | 10 | 157 | 12 | 159 | 4.19e-51 | 178 |
Msa0518090 | AT1G54330.1 | 52.903 | 155 | 70 | 1 | 9 | 163 | 8 | 159 | 4.50e-51 | 172 |
Msa0518090 | AT4G35580.3 | 54.054 | 148 | 68 | 0 | 10 | 157 | 12 | 159 | 5.52e-51 | 178 |
Msa0518090 | AT4G35580.2 | 54.054 | 148 | 68 | 0 | 10 | 157 | 12 | 159 | 5.67e-51 | 178 |
Msa0518090 | AT4G17980.1 | 51.266 | 158 | 73 | 2 | 4 | 157 | 3 | 160 | 6.06e-51 | 171 |
Msa0518090 | AT5G61430.1 | 52.866 | 157 | 70 | 2 | 9 | 163 | 18 | 172 | 8.54e-51 | 173 |
Msa0518090 | AT4G17980.2 | 51.266 | 158 | 73 | 2 | 4 | 157 | 3 | 160 | 1.08e-50 | 171 |
Msa0518090 | AT5G22290.1 | 47.126 | 174 | 76 | 3 | 3 | 167 | 17 | 183 | 1.41e-50 | 172 |
Msa0518090 | AT3G49530.1 | 51.333 | 150 | 72 | 1 | 10 | 158 | 16 | 165 | 1.45e-50 | 176 |
Msa0518090 | AT5G39610.1 | 54.430 | 158 | 66 | 3 | 9 | 163 | 22 | 176 | 2.09e-50 | 170 |
Msa0518090 | AT5G46590.1 | 49.359 | 156 | 77 | 2 | 4 | 157 | 3 | 158 | 1.16e-49 | 168 |
Msa0518090 | AT1G71930.2 | 48.734 | 158 | 78 | 2 | 7 | 163 | 9 | 164 | 2.96e-49 | 168 |
Msa0518090 | AT1G71930.1 | 48.734 | 158 | 78 | 2 | 7 | 163 | 9 | 164 | 2.96e-49 | 168 |
Msa0518090 | AT4G10350.1 | 50.331 | 151 | 74 | 1 | 9 | 158 | 11 | 161 | 4.00e-49 | 169 |
Msa0518090 | AT3G44290.2 | 51.020 | 147 | 64 | 2 | 8 | 154 | 15 | 153 | 6.62e-49 | 164 |
Msa0518090 | AT5G07680.2 | 51.592 | 157 | 72 | 2 | 9 | 163 | 5 | 159 | 9.33e-49 | 167 |
Msa0518090 | AT3G18400.1 | 51.678 | 149 | 69 | 2 | 9 | 157 | 7 | 152 | 9.90e-49 | 167 |
Msa0518090 | AT1G32870.1 | 51.786 | 168 | 77 | 2 | 7 | 172 | 10 | 175 | 1.18e-48 | 172 |
Msa0518090 | AT1G32870.2 | 51.786 | 168 | 77 | 2 | 7 | 172 | 10 | 175 | 1.21e-48 | 171 |
Msa0518090 | AT5G07680.1 | 51.592 | 157 | 72 | 2 | 9 | 163 | 19 | 173 | 1.24e-48 | 167 |
Msa0518090 | AT1G12260.2 | 47.561 | 164 | 77 | 4 | 9 | 168 | 9 | 167 | 1.71e-48 | 167 |
Msa0518090 | AT1G12260.1 | 47.561 | 164 | 77 | 4 | 9 | 168 | 9 | 167 | 2.65e-48 | 168 |
Msa0518090 | AT1G32870.3 | 51.786 | 168 | 77 | 2 | 7 | 172 | 46 | 211 | 3.20e-48 | 171 |
Msa0518090 | AT3G44290.1 | 51.370 | 146 | 63 | 2 | 9 | 154 | 16 | 153 | 6.07e-48 | 165 |
Msa0518090 | AT2G18060.3 | 41.500 | 200 | 104 | 4 | 9 | 206 | 11 | 199 | 7.13e-48 | 166 |
Msa0518090 | AT2G18060.1 | 41.500 | 200 | 104 | 4 | 9 | 206 | 11 | 199 | 7.13e-48 | 166 |
Msa0518090 | AT5G18270.2 | 44.811 | 212 | 105 | 6 | 9 | 215 | 23 | 227 | 7.57e-48 | 165 |
Msa0518090 | AT5G46590.2 | 52.174 | 138 | 65 | 1 | 4 | 140 | 3 | 140 | 1.16e-47 | 163 |
Msa0518090 | AT1G01720.1 | 46.746 | 169 | 83 | 3 | 1 | 165 | 1 | 166 | 1.90e-47 | 162 |
Msa0518090 | AT5G18270.1 | 44.076 | 211 | 108 | 5 | 9 | 215 | 23 | 227 | 2.05e-47 | 164 |
Msa0518090 | AT1G33280.1 | 49.669 | 151 | 72 | 2 | 9 | 158 | 10 | 157 | 2.39e-47 | 163 |
Msa0518090 | AT2G24430.2 | 50.318 | 157 | 73 | 3 | 3 | 157 | 12 | 165 | 3.37e-47 | 163 |
Msa0518090 | AT2G24430.1 | 50.318 | 157 | 73 | 3 | 3 | 157 | 12 | 165 | 3.37e-47 | 163 |
Msa0518090 | AT1G77450.1 | 48.701 | 154 | 73 | 3 | 9 | 159 | 12 | 162 | 3.50e-47 | 161 |
Msa0518090 | AT3G29035.1 | 49.697 | 165 | 79 | 2 | 9 | 171 | 26 | 188 | 5.89e-47 | 162 |
Msa0518090 | AT1G62700.1 | 48.701 | 154 | 70 | 4 | 9 | 158 | 9 | 157 | 7.32e-47 | 164 |
Msa0518090 | AT1G62700.2 | 48.701 | 154 | 70 | 4 | 9 | 158 | 9 | 157 | 7.32e-47 | 164 |
Msa0518090 | AT4G36160.1 | 48.026 | 152 | 74 | 3 | 9 | 158 | 12 | 160 | 1.51e-46 | 162 |
Msa0518090 | AT4G36160.3 | 48.026 | 152 | 74 | 3 | 9 | 158 | 12 | 160 | 1.51e-46 | 162 |
Msa0518090 | AT4G36160.2 | 48.026 | 152 | 74 | 3 | 9 | 158 | 16 | 164 | 1.55e-46 | 163 |
Msa0518090 | AT1G69490.1 | 38.756 | 209 | 110 | 3 | 9 | 201 | 11 | 217 | 2.25e-46 | 159 |
Msa0518090 | AT4G27410.2 | 46.980 | 149 | 77 | 1 | 9 | 157 | 16 | 162 | 3.15e-46 | 160 |
Msa0518090 | AT1G52890.1 | 47.333 | 150 | 77 | 1 | 9 | 158 | 16 | 163 | 3.58e-46 | 160 |
Msa0518090 | AT3G15170.1 | 48.765 | 162 | 77 | 3 | 6 | 163 | 19 | 178 | 7.87e-46 | 159 |
Msa0518090 | AT3G15500.1 | 46.667 | 150 | 78 | 1 | 9 | 158 | 16 | 163 | 1.06e-45 | 159 |
Msa0518090 | AT5G53950.1 | 50.311 | 161 | 72 | 4 | 2 | 157 | 12 | 169 | 3.04e-45 | 159 |
Msa0518090 | AT1G56010.2 | 45.506 | 178 | 90 | 4 | 1 | 174 | 14 | 188 | 3.34e-45 | 158 |
Msa0518090 | AT5G08790.1 | 46.626 | 163 | 78 | 4 | 3 | 159 | 2 | 161 | 3.51e-45 | 156 |
Msa0518090 | AT3G04060.1 | 49.677 | 155 | 73 | 3 | 9 | 160 | 22 | 174 | 6.56e-45 | 157 |
Msa0518090 | AT1G79580.3 | 48.026 | 152 | 74 | 3 | 9 | 158 | 19 | 167 | 7.86e-45 | 158 |
Msa0518090 | AT1G79580.5 | 48.026 | 152 | 74 | 3 | 9 | 158 | 19 | 167 | 7.86e-45 | 158 |
Msa0518090 | AT1G79580.4 | 48.026 | 152 | 74 | 3 | 9 | 158 | 19 | 167 | 7.86e-45 | 158 |
Msa0518090 | AT1G79580.2 | 48.026 | 152 | 74 | 3 | 9 | 158 | 19 | 167 | 7.86e-45 | 158 |
Msa0518090 | AT1G79580.1 | 48.026 | 152 | 74 | 3 | 9 | 158 | 19 | 167 | 7.86e-45 | 158 |
Msa0518090 | AT1G32510.1 | 45.000 | 160 | 80 | 2 | 6 | 157 | 5 | 164 | 2.04e-44 | 154 |
Msa0518090 | AT5G62380.2 | 48.684 | 152 | 73 | 3 | 9 | 158 | 9 | 157 | 2.93e-44 | 156 |
Msa0518090 | AT5G62380.1 | 48.684 | 152 | 73 | 3 | 9 | 158 | 9 | 157 | 2.93e-44 | 156 |
Msa0518090 | AT5G66300.1 | 45.181 | 166 | 85 | 4 | 9 | 171 | 14 | 176 | 4.50e-44 | 154 |
Msa0518090 | AT3G12977.1 | 46.753 | 154 | 79 | 2 | 9 | 161 | 20 | 171 | 1.30e-43 | 152 |
Msa0518090 | AT1G61110.1 | 47.531 | 162 | 70 | 4 | 9 | 157 | 18 | 177 | 2.85e-43 | 152 |
Msa0518090 | AT2G02450.1 | 44.516 | 155 | 81 | 3 | 6 | 159 | 50 | 200 | 3.84e-43 | 154 |
Msa0518090 | AT3G04070.2 | 44.099 | 161 | 76 | 3 | 9 | 157 | 12 | 170 | 4.84e-43 | 152 |
Msa0518090 | AT2G02450.2 | 44.516 | 155 | 81 | 3 | 6 | 159 | 50 | 200 | 5.45e-43 | 154 |
Msa0518090 | AT4G27410.3 | 40.462 | 173 | 88 | 1 | 9 | 166 | 16 | 188 | 1.07e-42 | 151 |
Msa0518090 | AT5G39820.1 | 42.857 | 175 | 75 | 5 | 6 | 157 | 19 | 191 | 1.11e-42 | 151 |
Msa0518090 | AT1G26870.1 | 44.785 | 163 | 77 | 4 | 6 | 157 | 15 | 175 | 1.58e-42 | 153 |
Msa0518090 | AT5G13180.1 | 48.125 | 160 | 71 | 4 | 9 | 164 | 16 | 167 | 2.35e-42 | 148 |
Msa0518090 | AT1G76420.1 | 48.366 | 153 | 74 | 3 | 9 | 159 | 24 | 173 | 3.32e-42 | 150 |
Msa0518090 | AT3G15510.1 | 43.069 | 202 | 89 | 9 | 11 | 198 | 21 | 210 | 3.61e-42 | 151 |
Msa0518090 | AT5G63790.1 | 44.785 | 163 | 81 | 4 | 3 | 159 | 45 | 204 | 6.40e-42 | 149 |
Msa0518090 | AT5G63790.2 | 44.785 | 163 | 81 | 4 | 3 | 159 | 55 | 214 | 7.71e-42 | 149 |
Msa0518090 | AT3G04070.1 | 35.507 | 276 | 156 | 7 | 9 | 277 | 12 | 272 | 9.60e-42 | 149 |
Msa0518090 | AT2G33480.1 | 51.634 | 153 | 63 | 4 | 9 | 158 | 17 | 161 | 1.95e-41 | 146 |
Msa0518090 | AT2G17040.1 | 44.444 | 153 | 75 | 4 | 8 | 157 | 7 | 152 | 3.35e-41 | 146 |
Msa0518090 | AT2G33480.2 | 50.000 | 152 | 65 | 3 | 9 | 158 | 17 | 159 | 4.21e-41 | 145 |
Msa0518090 | AT2G43000.1 | 42.949 | 156 | 86 | 2 | 3 | 157 | 14 | 167 | 2.75e-40 | 143 |
Msa0518090 | AT1G32770.1 | 41.975 | 162 | 83 | 2 | 9 | 159 | 18 | 179 | 3.86e-40 | 145 |
Msa0518090 | AT3G61910.1 | 43.636 | 165 | 75 | 4 | 9 | 157 | 13 | 175 | 1.02e-39 | 144 |
Msa0518090 | AT2G46770.1 | 40.964 | 166 | 80 | 3 | 9 | 158 | 18 | 181 | 2.87e-39 | 143 |
Msa0518090 | AT1G52880.1 | 45.283 | 159 | 73 | 4 | 11 | 157 | 21 | 177 | 1.10e-38 | 140 |
Msa0518090 | AT5G04395.1 | 43.452 | 168 | 77 | 4 | 2 | 155 | 24 | 187 | 1.89e-36 | 130 |
Msa0518090 | AT4G28530.1 | 43.114 | 167 | 71 | 4 | 9 | 157 | 12 | 172 | 5.88e-36 | 134 |
Msa0518090 | AT3G12910.1 | 38.953 | 172 | 85 | 4 | 3 | 157 | 17 | 185 | 4.04e-34 | 128 |
Msa0518090 | AT5G61430.2 | 55.046 | 109 | 47 | 1 | 57 | 163 | 1 | 109 | 8.52e-34 | 126 |
Msa0518090 | AT1G56010.1 | 47.863 | 117 | 58 | 1 | 61 | 174 | 5 | 121 | 1.58e-30 | 117 |
Msa0518090 | AT3G12977.2 | 49.524 | 105 | 52 | 1 | 59 | 162 | 15 | 119 | 1.86e-30 | 116 |
Msa0518090 | AT4G10350.2 | 50.526 | 95 | 47 | 0 | 64 | 158 | 20 | 114 | 1.36e-29 | 115 |
Msa0518090 | AT3G10490.4 | 53.922 | 102 | 45 | 2 | 81 | 181 | 1 | 101 | 4.09e-29 | 115 |
Msa0518090 | AT3G10490.3 | 53.922 | 102 | 45 | 2 | 81 | 181 | 1 | 101 | 4.09e-29 | 115 |
Msa0518090 | AT4G01520.1 | 40.000 | 155 | 79 | 5 | 10 | 157 | 7 | 154 | 6.39e-29 | 114 |
Msa0518090 | AT4G01550.1 | 40.698 | 172 | 83 | 7 | 10 | 171 | 7 | 169 | 1.20e-28 | 116 |
Msa0518090 | AT5G22380.1 | 38.217 | 157 | 90 | 5 | 10 | 159 | 8 | 164 | 2.12e-28 | 111 |
Msa0518090 | AT4G01540.3 | 40.000 | 155 | 79 | 5 | 10 | 157 | 7 | 154 | 4.53e-28 | 114 |
Msa0518090 | AT3G44350.2 | 38.710 | 155 | 90 | 5 | 10 | 159 | 8 | 162 | 5.34e-28 | 110 |
Msa0518090 | AT4G01540.1 | 40.000 | 155 | 79 | 5 | 10 | 157 | 7 | 154 | 6.48e-28 | 114 |
Msa0518090 | AT4G01540.2 | 40.000 | 155 | 79 | 5 | 10 | 157 | 7 | 154 | 6.49e-28 | 113 |
Msa0518090 | AT4G01540.4 | 40.000 | 155 | 79 | 5 | 10 | 157 | 7 | 154 | 6.78e-28 | 113 |
Msa0518090 | AT1G02230.1 | 40.127 | 157 | 77 | 6 | 6 | 154 | 1 | 148 | 2.69e-25 | 105 |
Msa0518090 | AT3G44350.1 | 37.908 | 153 | 90 | 5 | 10 | 157 | 8 | 160 | 3.03e-25 | 100 |
Msa0518090 | AT3G04420.2 | 37.333 | 150 | 87 | 2 | 10 | 157 | 6 | 150 | 2.42e-24 | 101 |
Msa0518090 | AT3G04420.1 | 40.800 | 125 | 72 | 1 | 10 | 132 | 6 | 130 | 8.52e-24 | 100 |
Msa0518090 | AT2G33480.3 | 49.524 | 105 | 49 | 3 | 57 | 158 | 1 | 104 | 1.65e-23 | 97.4 |
Msa0518090 | AT1G02250.1 | 38.816 | 152 | 77 | 5 | 10 | 154 | 6 | 148 | 1.09e-21 | 95.1 |
Msa0518090 | AT5G64530.1 | 35.329 | 167 | 74 | 7 | 9 | 157 | 5 | 155 | 1.21e-20 | 88.6 |
Msa0518090 | AT5G64530.2 | 40.909 | 132 | 58 | 6 | 9 | 136 | 5 | 120 | 5.99e-20 | 85.9 |
Msa0518090 | AT1G01010.1 | 38.608 | 158 | 74 | 7 | 10 | 154 | 6 | 153 | 7.11e-20 | 90.9 |
Msa0518090 | AT1G02220.1 | 35.294 | 153 | 79 | 5 | 10 | 155 | 6 | 145 | 1.16e-19 | 89.7 |
Msa0518090 | AT2G18060.2 | 36.364 | 121 | 65 | 3 | 87 | 206 | 2 | 111 | 3.20e-19 | 87.0 |
Msa0518090 | AT4G28530.2 | 38.281 | 128 | 59 | 3 | 9 | 118 | 12 | 137 | 4.34e-19 | 87.0 |
Msa0518090 | AT5G22290.2 | 42.222 | 90 | 37 | 2 | 87 | 167 | 1 | 84 | 8.53e-18 | 82.0 |
Msa0518090 | AT2G43000.2 | 39.080 | 87 | 52 | 1 | 72 | 157 | 3 | 89 | 2.30e-15 | 74.3 |
Msa0518090 | AT3G56530.1 | 30.263 | 152 | 95 | 4 | 9 | 155 | 54 | 199 | 2.55e-14 | 73.6 |
Msa0518090 | AT5G14000.2 | 33.071 | 127 | 79 | 3 | 10 | 134 | 18 | 140 | 1.68e-12 | 65.1 |
Msa0518090 | AT5G14000.1 | 33.071 | 127 | 79 | 3 | 10 | 134 | 18 | 140 | 3.75e-12 | 65.5 |
Msa0518090 | AT3G55210.1 | 25.904 | 166 | 99 | 6 | 6 | 155 | 10 | 167 | 3.57e-11 | 63.5 |
Msa0518090 | AT1G28470.1 | 30.939 | 181 | 99 | 9 | 10 | 173 | 80 | 251 | 3.96e-11 | 63.9 |
Msa0518090 | AT3G04430.1 | 30.435 | 138 | 72 | 6 | 13 | 133 | 6 | 136 | 4.83e-11 | 62.0 |
Find 164 sgRNAs with CRISPR-Local
Find 397 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGTTTCTGTTTGTTGAATT+TGG | 0.123004 | 3_4:+69923507 | Msa0518090:five_prime_UTR |
CTTCTCCGTCTTCAATTATT+AGG | 0.126880 | 3_4:+69923368 | Msa0518090:five_prime_UTR |
TCCCAGTCTTTCTCATTAAA+TGG | 0.189856 | 3_4:-69925423 | None:intergenic |
TGTTTCTGTTTGTTGAATTT+GGG | 0.192648 | 3_4:+69923508 | Msa0518090:five_prime_UTR |
TGAATTTGAACATTGATTTC+TGG | 0.198998 | 3_4:+69927875 | Msa0518090:three_prime_UTR |
GTATTTATAATAGGATTATT+TGG | 0.207819 | 3_4:-69923025 | None:intergenic |
TGTCATTTACTTCAGAAATA+TGG | 0.230925 | 3_4:-69925527 | None:intergenic |
TCCATACTGTGCACCATTCC+TGG | 0.233076 | 3_4:-69925397 | None:intergenic |
ATCTCATTTGGAATTAAATA+AGG | 0.245537 | 3_4:-69927471 | None:intergenic |
GTACCTTATATGACATAATT+TGG | 0.249762 | 3_4:+69927750 | Msa0518090:three_prime_UTR |
CAATCAGTTCGGTCTCCTTT+AGG | 0.274643 | 3_4:-69924081 | None:intergenic |
AGCTGTTTCTGTTTCTGTTT+GGG | 0.308393 | 3_4:+69923562 | Msa0518090:five_prime_UTR |
TGACATTGCTGTTGCGCTTA+AGG | 0.311635 | 3_4:+69923476 | Msa0518090:five_prime_UTR |
TTCTCCGTCTTCAATTATTA+GGG | 0.314791 | 3_4:+69923369 | Msa0518090:five_prime_UTR |
AAGCTGTTTCTGTTTCTGTT+TGG | 0.317698 | 3_4:+69923561 | Msa0518090:five_prime_UTR |
GGAAGGGTAGTATTTATAAT+AGG | 0.328380 | 3_4:-69923034 | None:intergenic |
CTGCCAAATTATGTCATATA+AGG | 0.338830 | 3_4:-69927753 | None:intergenic |
GTGCAATATTTCTTTCCAAC+AGG | 0.361824 | 3_4:-69923931 | None:intergenic |
TCAAGCAACTCAAAGAAATC+AGG | 0.367048 | 3_4:-69927627 | None:intergenic |
TTTCTGTTTCTGTTTGGGTT+TGG | 0.370100 | 3_4:+69923567 | Msa0518090:five_prime_UTR |
GGGGTTGCTTCTCTCTCTTC+CGG | 0.374828 | 3_4:-69922968 | None:intergenic |
GGTGCAGACACAGCAGCAAC+AGG | 0.376155 | 3_4:-69925480 | None:intergenic |
GAAACAAAATTGATGATTCC+AGG | 0.377486 | 3_4:+69923616 | Msa0518090:CDS |
TGTTTAGTCTGCCAGGATAA+TGG | 0.379048 | 3_4:-69927660 | None:intergenic |
TGTTTAGTCTGCCAGGATAA+TGG | 0.379048 | 3_4:-69927719 | None:intergenic |
ACAATCGTCGCAGCAGGCTT+TGG | 0.383872 | 3_4:+69923313 | Msa0518090:five_prime_UTR |
CCCAGGAATGGTGCACAGTA+TGG | 0.387270 | 3_4:+69925396 | Msa0518090:CDS |
AGAACTCCTATGTGATTTGT+AGG | 0.387741 | 3_4:+69925349 | Msa0518090:intron |
AACCATTTAATGAGAAAGAC+TGG | 0.390374 | 3_4:+69925421 | Msa0518090:CDS |
AGTTCAGCAATGACATGAAA+AGG | 0.397881 | 3_4:-69923712 | None:intergenic |
CCCTCTGCAAGTGGATGTAT+TGG | 0.400344 | 3_4:+69925555 | Msa0518090:CDS |
ATTCATCAGTTTACATATGT+TGG | 0.409632 | 3_4:-69927904 | None:intergenic |
GCACGGGAGGGAGGATGAAT+CGG | 0.411671 | 3_4:+69923950 | Msa0518090:CDS |
TATTAACAGCTTGGTTGGAT+TGG | 0.414108 | 3_4:+69927512 | Msa0518090:CDS |
CCATACTGTGCACCATTCCT+GGG | 0.415740 | 3_4:-69925396 | None:intergenic |
GGAATATCTTCTTCCGCCAT+TGG | 0.422112 | 3_4:+69923334 | Msa0518090:five_prime_UTR |
GCTTGATCACAGTTATTTGT+CGG | 0.433987 | 3_4:+69927932 | Msa0518090:three_prime_UTR |
ACATAAAATCGCCTCGTTCG+CGG | 0.439243 | 3_4:+69923086 | Msa0518090:five_prime_UTR |
GGAGATATTAACAGCTTGGT+TGG | 0.445872 | 3_4:+69927507 | Msa0518090:CDS |
TCCATCATGTTTAGTCTGCC+AGG | 0.448649 | 3_4:-69927726 | None:intergenic |
GGAAAATTGTTGCTTGGTGG+AGG | 0.453529 | 3_4:-69922989 | None:intergenic |
GACGATGAAAATGCATTGGC+CGG | 0.464243 | 3_4:+69925687 | Msa0518090:CDS |
ACCTAGAGGTGCCATTATCC+TGG | 0.465437 | 3_4:+69927649 | Msa0518090:CDS |
ACCTAGAGGTGCCATTATCC+TGG | 0.465437 | 3_4:+69927708 | Msa0518090:three_prime_UTR |
ATGAATCGGGCAACAGAAGT+AGG | 0.466475 | 3_4:+69923964 | Msa0518090:CDS |
CTAAAGGAGACCGAACTGAT+TGG | 0.467195 | 3_4:+69924082 | Msa0518090:CDS |
TGGTACTTCTTTACCCCTGT+TGG | 0.468244 | 3_4:+69923916 | Msa0518090:CDS |
GCCATCATGTTTAGTCTGCC+AGG | 0.468396 | 3_4:-69927667 | None:intergenic |
ATAAACGAAAAGCTATTTGC+TGG | 0.469573 | 3_4:+69927579 | Msa0518090:CDS |
AAAAGGAAGGTCCTGGTCCC+AGG | 0.470057 | 3_4:+69925379 | Msa0518090:CDS |
AAAATTGTTGCTTGGTGGAG+GGG | 0.475271 | 3_4:-69922987 | None:intergenic |
TAAAGGAGACCGAACTGATT+GGG | 0.479184 | 3_4:+69924083 | Msa0518090:CDS |
CACGGGAGGGAGGATGAATC+GGG | 0.479266 | 3_4:+69923951 | Msa0518090:CDS |
TGAAGAGAAAATGTTGAGAC+TGG | 0.482912 | 3_4:-69923284 | None:intergenic |
CTTTGAGTTGCTTGACCTAG+AGG | 0.489029 | 3_4:+69927635 | Msa0518090:CDS |
CGACAGAAGGTTGATAATCC+TGG | 0.495670 | 3_4:+69927423 | Msa0518090:intron |
ACGACACACCCTTCAGCTCT+AGG | 0.498439 | 3_4:+69925621 | Msa0518090:CDS |
TCAGCGTTGTTTGCTTGACC+AGG | 0.500954 | 3_4:-69927441 | None:intergenic |
CATTTACAAGTATGCTCCAT+GGG | 0.502977 | 3_4:+69923738 | Msa0518090:CDS |
CCGTTGTAAGACATTGTATG+TGG | 0.504987 | 3_4:+69927835 | Msa0518090:three_prime_UTR |
TCACCCCACTGATGTTGAGC+TGG | 0.506550 | 3_4:+69923648 | Msa0518090:CDS |
CTATCAAGATTGATGCCCTC+TGG | 0.507191 | 3_4:+69925597 | Msa0518090:CDS |
CACACTGGCAAAGCTCCTAA+AGG | 0.508822 | 3_4:+69924066 | Msa0518090:CDS |
GGGCAACAGAAGTAGGGTAC+TGG | 0.511584 | 3_4:+69923971 | Msa0518090:CDS |
GTAGGGTACTGGAAGACTAC+AGG | 0.511858 | 3_4:+69923982 | Msa0518090:CDS |
GGTGCTTTCTCATCCTTCTC+CGG | 0.514866 | 3_4:+69923107 | Msa0518090:five_prime_UTR |
GTTTCTGTTTGTTGAATTTG+GGG | 0.517264 | 3_4:+69923509 | Msa0518090:five_prime_UTR |
GCTTGATTGCCTAGAGCTGA+AGG | 0.517653 | 3_4:-69925630 | None:intergenic |
TGAATAACAATCGTCGCAGC+AGG | 0.518056 | 3_4:+69923307 | Msa0518090:five_prime_UTR |
CTTTGCCAGTGTGAAACACC+AGG | 0.519578 | 3_4:-69924056 | None:intergenic |
GTTCAGCAATGACATGAAAA+GGG | 0.521712 | 3_4:-69923711 | None:intergenic |
CCTGGGAGATATTAACAGCT+TGG | 0.523071 | 3_4:+69927503 | Msa0518090:CDS |
GTGGAACACCATTGTCAGCT+AGG | 0.523981 | 3_4:-69924137 | None:intergenic |
GATTTGTAGGGTATTTCAAA+AGG | 0.527496 | 3_4:+69925362 | Msa0518090:CDS |
GAGAGTGTATGAAGCACGGA+AGG | 0.527886 | 3_4:-69923051 | None:intergenic |
AGCTTGGTTGGATTGGATGA+TGG | 0.527918 | 3_4:+69927519 | Msa0518090:CDS |
TGTAGGGTATTTCAAAAGGA+AGG | 0.527921 | 3_4:+69925366 | Msa0518090:CDS |
GCTACAACGGATGGTGATGA+TGG | 0.530888 | 3_4:-69923258 | None:intergenic |
TCCAATACATCCACTTGCAG+AGG | 0.532823 | 3_4:-69925556 | None:intergenic |
TTTCGACGATGAAAATGCAT+TGG | 0.532966 | 3_4:+69925683 | Msa0518090:CDS |
ATCGTCGAAAATAGCAAGCA+TGG | 0.533664 | 3_4:-69925670 | None:intergenic |
AATGGAAAATTGTTGCTTGG+TGG | 0.535723 | 3_4:-69922992 | None:intergenic |
AAGAGGAAGCTTACCGGAGA+AGG | 0.538649 | 3_4:-69923120 | None:intergenic |
CATGCATAACCCAATCAGTT+CGG | 0.542397 | 3_4:-69924092 | None:intergenic |
CAAGCAACTCAAAGAAATCA+GGG | 0.542667 | 3_4:-69927626 | None:intergenic |
TCTTCCGGTGAGTGAGTAAG+AGG | 0.544744 | 3_4:-69922953 | None:intergenic |
AGCTGACAATGGTGTTCCAC+AGG | 0.546378 | 3_4:+69924140 | Msa0518090:CDS |
GAAAATTGTTGCTTGGTGGA+GGG | 0.547369 | 3_4:-69922988 | None:intergenic |
AGAAATATTGCACGGGAGGG+AGG | 0.549227 | 3_4:+69923941 | Msa0518090:CDS |
TCTTGATAGACATGATAAAG+AGG | 0.553266 | 3_4:-69925583 | None:intergenic |
TCCAAACCTGGTAGATCCCA+TGG | 0.553951 | 3_4:-69923754 | None:intergenic |
AAACAAAATTGATGATTCCA+GGG | 0.554783 | 3_4:+69923617 | Msa0518090:CDS |
GAACATAAGAATCAAGTGGT+GGG | 0.560868 | 3_4:+69924021 | Msa0518090:CDS |
TGCAATATTTCTTTCCAACA+GGG | 0.561122 | 3_4:-69923930 | None:intergenic |
GAAGGTCCTGGTCCCAGGAA+TGG | 0.561485 | 3_4:+69925384 | Msa0518090:CDS |
GACTGGAAAGCTACAACGGA+TGG | 0.563593 | 3_4:-69923267 | None:intergenic |
ACAAGAATTTACTCAAACAA+AGG | 0.564360 | 3_4:-69927960 | None:intergenic |
TCAGAAATATGGCTTGAGCT+AGG | 0.568979 | 3_4:-69925516 | None:intergenic |
GATAAATCTTTGCTCAAGAG+TGG | 0.570392 | 3_4:+69923883 | Msa0518090:intron |
GTTGGATTGGATGATGGAAG+CGG | 0.572350 | 3_4:+69927525 | Msa0518090:CDS |
GGAAGACTACAGGGAAGGAT+AGG | 0.572952 | 3_4:+69923992 | Msa0518090:CDS |
CTAATAATTGAAGACGGAGA+AGG | 0.573119 | 3_4:-69923367 | None:intergenic |
ACATTTACAAGTATGCTCCA+TGG | 0.574983 | 3_4:+69923737 | Msa0518090:CDS |
TCCTGGCAGACTAAACATGA+TGG | 0.576156 | 3_4:+69927725 | Msa0518090:three_prime_UTR |
ACGATGAAAATGCATTGGCC+GGG | 0.583391 | 3_4:+69925688 | Msa0518090:CDS |
GTATTTCAAAAGGAAGGTCC+TGG | 0.583445 | 3_4:+69925372 | Msa0518090:CDS |
GAACTCCTATGTGATTTGTA+GGG | 0.583857 | 3_4:+69925350 | Msa0518090:intron |
TGAAGGGTGTGTCGTGCCAG+AGG | 0.584025 | 3_4:-69925613 | None:intergenic |
TCCACCTCTTACTCACTCAC+CGG | 0.586162 | 3_4:+69922949 | None:intergenic |
AACATAAGAATCAAGTGGTG+GGG | 0.590194 | 3_4:+69924022 | Msa0518090:CDS |
GAAGGGTGTGTCGTGCCAGA+GGG | 0.592236 | 3_4:-69925612 | None:intergenic |
TTCTGAGTTACTTGACCTAG+AGG | 0.592289 | 3_4:+69927694 | Msa0518090:three_prime_UTR |
TGAATCGGGCAACAGAAGTA+GGG | 0.592463 | 3_4:+69923965 | Msa0518090:CDS |
GGTCAAGCAAACAACGCTGA+AGG | 0.593547 | 3_4:+69927444 | Msa0518090:CDS |
CAACAAACAGAAACAAACTC+TGG | 0.595937 | 3_4:-69923500 | None:intergenic |
ATTACCAGCTCAACATCAGT+GGG | 0.596276 | 3_4:-69923652 | None:intergenic |
ATGAGAAAGCACCGCGAACG+AGG | 0.596637 | 3_4:-69923097 | None:intergenic |
GGAAAGAAATATTGCACGGG+AGG | 0.596853 | 3_4:+69923937 | Msa0518090:CDS |
GACATGCATCCCTCTGCAAG+TGG | 0.596887 | 3_4:+69925546 | Msa0518090:CDS |
AGAACCCTGGTGTTTCACAC+TGG | 0.601634 | 3_4:+69924051 | Msa0518090:CDS |
GAGAGAGAGTGTATGAAGCA+CGG | 0.602258 | 3_4:-69923055 | None:intergenic |
GCCAGGATAATGGCACCTCT+AGG | 0.602723 | 3_4:-69927650 | None:intergenic |
GCCAGGATAATGGCACCTCT+AGG | 0.602723 | 3_4:-69927709 | None:intergenic |
TGTGCACCATTCCTGGGACC+AGG | 0.603992 | 3_4:-69925390 | None:intergenic |
GTGGGGTGAAAACGAAACCC+TGG | 0.604367 | 3_4:-69923634 | None:intergenic |
CATTACCAGCTCAACATCAG+TGG | 0.606060 | 3_4:-69923653 | None:intergenic |
AGCAACTCAAAGAAATCAGG+GGG | 0.608948 | 3_4:-69927624 | None:intergenic |
TCCGGTGAGTGAGTAAGAGG+TGG | 0.610007 | 3_4:-69922950 | None:intergenic |
TCCTGGCAGACTAAACATGA+TGG | 0.610442 | 3_4:+69927666 | Msa0518090:CDS |
CCAAGCTGTTAATATCTCCC+AGG | 0.614179 | 3_4:-69927503 | None:intergenic |
CTTGATTGCCTAGAGCTGAA+GGG | 0.615214 | 3_4:-69925629 | None:intergenic |
GAATGAAAACAATGGATCTG+AGG | 0.618267 | 3_4:+69925710 | Msa0518090:CDS |
GCAATATTTCTTTCCAACAG+GGG | 0.618582 | 3_4:-69923929 | None:intergenic |
CCAATACATCCACTTGCAGA+GGG | 0.625389 | 3_4:-69925555 | None:intergenic |
GAGCTAGGTAGAATGAGAGC+TGG | 0.627457 | 3_4:-69925501 | None:intergenic |
GTTGGAAAGAAATATTGCAC+GGG | 0.629534 | 3_4:+69923934 | Msa0518090:CDS |
TGAACATAAGAATCAAGTGG+TGG | 0.630537 | 3_4:+69924020 | Msa0518090:CDS |
TGTTGGAAAGAAATATTGCA+CGG | 0.632190 | 3_4:+69923933 | Msa0518090:CDS |
TTTCTGTTTGTTGAATTTGG+GGG | 0.633894 | 3_4:+69923510 | Msa0518090:five_prime_UTR |
ACCATTTAATGAGAAAGACT+GGG | 0.636505 | 3_4:+69925422 | Msa0518090:CDS |
AGAAGGAAGATCAAGTCCAA+TGG | 0.639679 | 3_4:-69923350 | None:intergenic |
TATGCTCCATGGGATCTACC+AGG | 0.645247 | 3_4:+69923748 | Msa0518090:CDS |
TAGGGTACTGGAAGACTACA+GGG | 0.648401 | 3_4:+69923983 | Msa0518090:CDS |
TTGGCCGGGAATGAAAACAA+TGG | 0.650090 | 3_4:+69925702 | Msa0518090:CDS |
ACAACCCTAATAATTGAAGA+CGG | 0.651257 | 3_4:-69923373 | None:intergenic |
GACAAAGACCTAGCTGACAA+TGG | 0.652509 | 3_4:+69924129 | Msa0518090:CDS |
AGAGTGTATGAAGCACGGAA+GGG | 0.653850 | 3_4:-69923050 | None:intergenic |
GTGCAGACACAGCAGCAACA+GGG | 0.657913 | 3_4:-69925479 | None:intergenic |
AAATACCCTACAAATCACAT+AGG | 0.659266 | 3_4:-69925355 | None:intergenic |
TCAAGAGTGGTGATTTGCAA+TGG | 0.660182 | 3_4:+69923896 | Msa0518090:CDS |
TTGAGACTGGAAAGCTACAA+CGG | 0.662420 | 3_4:-69923271 | None:intergenic |
CCACATACAATGTCTTACAA+CGG | 0.670248 | 3_4:-69927835 | None:intergenic |
AGGAAGATCAAGTCCAATGG+CGG | 0.670387 | 3_4:-69923347 | None:intergenic |
GTGATGATAAGAAAAGTCAT+CGG | 0.671182 | 3_4:-69923231 | None:intergenic |
GAAAGAAATATTGCACGGGA+GGG | 0.676449 | 3_4:+69923938 | Msa0518090:CDS |
GATTGAACATAAGAATCAAG+TGG | 0.676975 | 3_4:+69924017 | Msa0518090:CDS |
GTACTGGAAGACTACAGGGA+AGG | 0.680520 | 3_4:+69923987 | Msa0518090:CDS |
AAGCAACTCAAAGAAATCAG+GGG | 0.683918 | 3_4:-69927625 | None:intergenic |
AAGAAAAGTCATCGGCACAG+TGG | 0.690558 | 3_4:-69923223 | None:intergenic |
GAAAGACTGGGATAGCGAAG+AGG | 0.695888 | 3_4:+69925434 | Msa0518090:CDS |
TTTGCCAGTGTGAAACACCA+GGG | 0.703208 | 3_4:-69924055 | None:intergenic |
GGTGGGGATGATAAGAACCC+TGG | 0.707991 | 3_4:+69924038 | Msa0518090:CDS |
GCAACTCAAAGAAATCAGGG+GGG | 0.804791 | 3_4:-69927623 | None:intergenic |
TTACCAGCTCAACATCAGTG+GGG | 0.822926 | 3_4:-69923651 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATGTTAAAAATAAAAAAGA+GGG | - | chr3_4:69923411-69923430 | None:intergenic | 10.0% |
!! | AATTATTATTAGTATTAACA+AGG | + | chr3_4:69924638-69924657 | Msa0518090:intron | 10.0% |
!! | ATTATTATTAGTATTAACAA+GGG | + | chr3_4:69924639-69924658 | Msa0518090:intron | 10.0% |
!! | TTATTATTAGTATTAATAAG+GGG | + | chr3_4:69924675-69924694 | Msa0518090:intron | 10.0% |
!! | AAAAAAAATAAAAAAAGTTG+AGG | - | chr3_4:69925848-69925867 | None:intergenic | 10.0% |
!!! | ATTTTTGTTAAAAAAATTTG+GGG | + | chr3_4:69926768-69926787 | Msa0518090:intron | 10.0% |
!! | TTATTTGGAAAAAAGAAAAA+TGG | - | chr3_4:69923013-69923032 | None:intergenic | 15.0% |
!! | GTATTTATAATAGGATTATT+TGG | - | chr3_4:69923028-69923047 | None:intergenic | 15.0% |
!! | CAATGTTAAAAATAAAAAAG+AGG | - | chr3_4:69923412-69923431 | None:intergenic | 15.0% |
!! | ATAACTAAAAAACAAAAACT+AGG | - | chr3_4:69923450-69923469 | None:intergenic | 15.0% |
!!! | ACTAATAATAATTTGTCTTA+GGG | - | chr3_4:69924631-69924650 | None:intergenic | 15.0% |
!!! | TACTAATAATAATTTGTCTT+AGG | - | chr3_4:69924632-69924651 | None:intergenic | 15.0% |
!! | TTATTATTAGTATTAACAAG+GGG | + | chr3_4:69924640-69924659 | Msa0518090:intron | 15.0% |
!!! | ACTAATAATAATTTGTCTTA+GGG | - | chr3_4:69924631-69924650 | None:intergenic | 15.0% |
!!! | TACTAATAATAATTTGTCTT+AGG | - | chr3_4:69924632-69924651 | None:intergenic | 15.0% |
!! | TTGAAATAAGACTTATATTT+AGG | + | chr3_4:69924733-69924752 | Msa0518090:intron | 15.0% |
!!! | ATTTCTCTTATTTGTTTTTT+TGG | + | chr3_4:69924892-69924911 | Msa0518090:intron | 15.0% |
!!! | TTTTTGTTAAAAAAATTTGG+GGG | + | chr3_4:69926769-69926788 | Msa0518090:intron | 15.0% |
!!! | TTATAGTATTTTCATCTTTT+TGG | - | chr3_4:69927563-69927582 | None:intergenic | 15.0% |
!!! | AATTTGATAATGCAATGTTA+GGG | + | chr3_4:69923198-69923217 | Msa0518090:intron | 20.0% |
!!! | TTTTCTTTTTGATTTTTCGA+TGG | + | chr3_4:69923591-69923610 | Msa0518090:exon | 20.0% |
!! | ATATGTCAATAATCAAAAAC+TGG | - | chr3_4:69924306-69924325 | None:intergenic | 20.0% |
!!! | TATTTGTTTTTTTGGAAACT+TGG | + | chr3_4:69924900-69924919 | Msa0518090:intron | 20.0% |
!! | TCAAAGATAACTAAAAAAAG+AGG | - | chr3_4:69925900-69925919 | None:intergenic | 20.0% |
!! | AGCAAAAAAAAATGAGAAAT+CGG | + | chr3_4:69926098-69926117 | Msa0518090:intron | 20.0% |
!! | TACTTTCTACACATATTTAT+AGG | - | chr3_4:69926163-69926182 | None:intergenic | 20.0% |
!!! | TATTGTATTCTGCATTTTTT+GGG | + | chr3_4:69926642-69926661 | Msa0518090:intron | 20.0% |
!! | ATGAAAGTTTGTAAATTAGT+TGG | + | chr3_4:69927061-69927080 | Msa0518090:intron | 20.0% |
!!! | TGCTTCTTAATTTATTTCTT+TGG | - | chr3_4:69927095-69927114 | None:intergenic | 20.0% |
!! | AAAGAAATAAATTAAGAAGC+AGG | + | chr3_4:69927094-69927113 | Msa0518090:intron | 20.0% |
!!! | ATCTCATTTGGAATTAAATA+AGG | - | chr3_4:69927474-69927493 | None:intergenic | 20.0% |
!!! | AATTCCAAATGAGATTTTTA+AGG | + | chr3_4:69927479-69927498 | Msa0518090:CDS | 20.0% |
! | AAAAATGGAAAATTGTTGCT+TGG | - | chr3_4:69922998-69923017 | None:intergenic | 25.0% |
!!! | GAATTTGATAATGCAATGTT+AGG | + | chr3_4:69923197-69923216 | Msa0518090:intron | 25.0% |
!!! | TTGTTTCTGTTTGTTGAATT+TGG | + | chr3_4:69923507-69923526 | Msa0518090:five_prime_UTR | 25.0% |
!! | TGTTTCTGTTTGTTGAATTT+GGG | + | chr3_4:69923508-69923527 | Msa0518090:five_prime_UTR | 25.0% |
!!! | TGGAATCATCAATTTTGTTT+CGG | - | chr3_4:69923617-69923636 | None:intergenic | 25.0% |
!! | AAACAAAATTGATGATTCCA+GGG | + | chr3_4:69923617-69923636 | Msa0518090:CDS | 25.0% |
! | GAGGAATTATGTTTATCAAT+TGG | + | chr3_4:69924179-69924198 | Msa0518090:intron | 25.0% |
!!! | CAAAAGTATTCTCTCAAAAA+AGG | + | chr3_4:69925091-69925110 | Msa0518090:intron | 25.0% |
!! | TGTCATTTACTTCAGAAATA+TGG | - | chr3_4:69925530-69925549 | None:intergenic | 25.0% |
! | TTATATAAAACATCACACTC+TGG | + | chr3_4:69925942-69925961 | Msa0518090:intron | 25.0% |
!!! | TTCTCATTTTTTTTTGCTAC+AGG | - | chr3_4:69926096-69926115 | None:intergenic | 25.0% |
! | GTACAAAATTCTTATGCATT+AGG | + | chr3_4:69926294-69926313 | Msa0518090:intron | 25.0% |
!!! | TTTTTTTTACGCCCTATTTT+TGG | + | chr3_4:69926432-69926451 | Msa0518090:intron | 25.0% |
! | TTACAAAGATAACAAAGAGA+AGG | - | chr3_4:69926466-69926485 | None:intergenic | 25.0% |
!!! | GTATTGTATTCTGCATTTTT+TGG | + | chr3_4:69926641-69926660 | Msa0518090:intron | 25.0% |
!!! | TGCATTTTTTGGGTATATTT+TGG | + | chr3_4:69926652-69926671 | Msa0518090:intron | 25.0% |
! | AAACTTTCATTTGCACAAAA+GGG | - | chr3_4:69927051-69927070 | None:intergenic | 25.0% |
!!! | TTTTTAATGGTTAGTCAAAG+GGG | - | chr3_4:69927208-69927227 | None:intergenic | 25.0% |
!!! | GTTTTTAATGGTTAGTCAAA+GGG | - | chr3_4:69927209-69927228 | None:intergenic | 25.0% |
!!! | AGTTTTTAATGGTTAGTCAA+AGG | - | chr3_4:69927210-69927229 | None:intergenic | 25.0% |
! | TTTGACTAACCATTAAAAAC+TGG | + | chr3_4:69927209-69927228 | Msa0518090:intron | 25.0% |
! | GTACCTTATATGACATAATT+TGG | + | chr3_4:69927750-69927769 | Msa0518090:three_prime_UTR | 25.0% |
!! | TAGTTTTCTCTAGTCATATA+AGG | - | chr3_4:69927796-69927815 | None:intergenic | 25.0% |
!!! | TGAATTTGAACATTGATTTC+TGG | + | chr3_4:69927875-69927894 | Msa0518090:three_prime_UTR | 25.0% |
! | ATTCATCAGTTTACATATGT+TGG | - | chr3_4:69927907-69927926 | None:intergenic | 25.0% |
GGAAGGGTAGTATTTATAAT+AGG | - | chr3_4:69923037-69923056 | None:intergenic | 30.0% | |
ATTTCATATTCTGAGCGATT+GGG | - | chr3_4:69923176-69923195 | None:intergenic | 30.0% | |
AATTTCATATTCTGAGCGAT+TGG | - | chr3_4:69923177-69923196 | None:intergenic | 30.0% | |
GTGATGATAAGAAAAGTCAT+CGG | - | chr3_4:69923234-69923253 | None:intergenic | 30.0% | |
! | GATGACTTTTCTTATCATCA+CGG | + | chr3_4:69923233-69923252 | Msa0518090:five_prime_UTR | 30.0% |
TTCTCCGTCTTCAATTATTA+GGG | + | chr3_4:69923369-69923388 | Msa0518090:five_prime_UTR | 30.0% | |
ACAACCCTAATAATTGAAGA+CGG | - | chr3_4:69923376-69923395 | None:intergenic | 30.0% | |
! | GTTTCTGTTTGTTGAATTTG+GGG | + | chr3_4:69923509-69923528 | Msa0518090:five_prime_UTR | 30.0% |
! | TTTCTGTTTGTTGAATTTGG+GGG | + | chr3_4:69923510-69923529 | Msa0518090:five_prime_UTR | 30.0% |
! | GAAACAAAATTGATGATTCC+AGG | + | chr3_4:69923616-69923635 | Msa0518090:CDS | 30.0% |
!! | TGGTAATGTATTTTCTCAAG+AGG | + | chr3_4:69923668-69923687 | Msa0518090:CDS | 30.0% |
! | TTTTCTCAAGAGGAAGATTT+TGG | + | chr3_4:69923678-69923697 | Msa0518090:CDS | 30.0% |
! | TTTCTCAAGAGGAAGATTTT+GGG | + | chr3_4:69923679-69923698 | Msa0518090:CDS | 30.0% |
!! | GTTTTAAGCTTTTTGTCTGT+CGG | + | chr3_4:69923795-69923814 | Msa0518090:intron | 30.0% |
TGCAATATTTCTTTCCAACA+GGG | - | chr3_4:69923933-69923952 | None:intergenic | 30.0% | |
TGTTGGAAAGAAATATTGCA+CGG | + | chr3_4:69923933-69923952 | Msa0518090:CDS | 30.0% | |
GATTGAACATAAGAATCAAG+TGG | + | chr3_4:69924017-69924036 | Msa0518090:CDS | 30.0% | |
! | CCAACAAAAGCTGTAATTTT+AGG | - | chr3_4:69924336-69924355 | None:intergenic | 30.0% |
! | CCTAAAATTACAGCTTTTGT+TGG | + | chr3_4:69924333-69924352 | Msa0518090:intron | 30.0% |
GAGTTTAACATGAAAACACA+TGG | - | chr3_4:69924378-69924397 | None:intergenic | 30.0% | |
GACAAAGCTGTTTATATCAA+AGG | - | chr3_4:69924494-69924513 | None:intergenic | 30.0% | |
TAATGTATCCATTGTGTGTA+TGG | + | chr3_4:69924550-69924569 | Msa0518090:intron | 30.0% | |
!!! | TAGGAACAATTTTTTCCCAA+AGG | + | chr3_4:69924752-69924771 | Msa0518090:intron | 30.0% |
! | CTTTGAAAAAAATGGAAGGA+TGG | + | chr3_4:69924822-69924841 | Msa0518090:intron | 30.0% |
!!! | TTTTTTGGAAACTTGGTATC+CGG | + | chr3_4:69924907-69924926 | Msa0518090:intron | 30.0% |
!!! | ATTGTATTGGAGGAGTATTT+TGG | + | chr3_4:69924972-69924991 | Msa0518090:intron | 30.0% |
ACTTGGTATATTCTTAGTCT+GGG | + | chr3_4:69925246-69925265 | Msa0518090:intron | 30.0% | |
!!! | TTTTTTTCTGATTGTTCTCC+TGG | + | chr3_4:69925289-69925308 | Msa0518090:intron | 30.0% |
AGAACAGTTAAGATAAAACC+AGG | - | chr3_4:69925310-69925329 | None:intergenic | 30.0% | |
AAATACCCTACAAATCACAT+AGG | - | chr3_4:69925358-69925377 | None:intergenic | 30.0% | |
! | GATTTGTAGGGTATTTCAAA+AGG | + | chr3_4:69925362-69925381 | Msa0518090:CDS | 30.0% |
AACCATTTAATGAGAAAGAC+TGG | + | chr3_4:69925421-69925440 | Msa0518090:CDS | 30.0% | |
ACCATTTAATGAGAAAGACT+GGG | + | chr3_4:69925422-69925441 | Msa0518090:CDS | 30.0% | |
TCTTGATAGACATGATAAAG+AGG | - | chr3_4:69925586-69925605 | None:intergenic | 30.0% | |
CACATATTTATAGGTCATGT+GGG | - | chr3_4:69926154-69926173 | None:intergenic | 30.0% | |
ACACATATTTATAGGTCATG+TGG | - | chr3_4:69926155-69926174 | None:intergenic | 30.0% | |
! | ATGTATCACGTGTTATTAGA+AGG | + | chr3_4:69926354-69926373 | Msa0518090:intron | 30.0% |
CTTTCTATCAGTTTGATCAT+TGG | + | chr3_4:69926586-69926605 | Msa0518090:intron | 30.0% | |
ATAGGAAACTAAGACAAAAG+AGG | - | chr3_4:69926705-69926724 | None:intergenic | 30.0% | |
ACAAATGTCCAATGTTCTAA+TGG | - | chr3_4:69926736-69926755 | None:intergenic | 30.0% | |
TAGTCTAACATTCATTACCT+AGG | - | chr3_4:69926899-69926918 | None:intergenic | 30.0% | |
AACTTTCATTTGCACAAAAG+GGG | - | chr3_4:69927050-69927069 | None:intergenic | 30.0% | |
CAAACTTTCATTTGCACAAA+AGG | - | chr3_4:69927052-69927071 | None:intergenic | 30.0% | |
AACAAAAGAGACAGTAAGAT+TGG | - | chr3_4:69927134-69927153 | None:intergenic | 30.0% | |
!! | TCTTACTGTCTCTTTTGTTT+AGG | + | chr3_4:69927135-69927154 | Msa0518090:intron | 30.0% |
!! | CTTACTGTCTCTTTTGTTTA+GGG | + | chr3_4:69927136-69927155 | Msa0518090:intron | 30.0% |
ACTAACCATTAAAAACTGGA+AGG | + | chr3_4:69927213-69927232 | Msa0518090:intron | 30.0% | |
TTTGATCCTACTAATCAAGA+TGG | + | chr3_4:69927254-69927273 | Msa0518090:intron | 30.0% | |
AGGTCCTTAAAAATCTCATT+TGG | - | chr3_4:69927486-69927505 | None:intergenic | 30.0% | |
!! | AAATGAGATTTTTAAGGACC+TGG | + | chr3_4:69927485-69927504 | Msa0518090:CDS | 30.0% |
!! | AATGAGATTTTTAAGGACCT+GGG | + | chr3_4:69927486-69927505 | Msa0518090:CDS | 30.0% |
!! | ATTTTCATCTTTTTGGCCAT+AGG | - | chr3_4:69927556-69927575 | None:intergenic | 30.0% |
ATAAACGAAAAGCTATTTGC+TGG | + | chr3_4:69927579-69927598 | Msa0518090:CDS | 30.0% | |
CTGCCAAATTATGTCATATA+AGG | - | chr3_4:69927756-69927775 | None:intergenic | 30.0% | |
! | AATGGAAAATTGTTGCTTGG+TGG | - | chr3_4:69922995-69923014 | None:intergenic | 35.0% |
GATGAGAATGAATGAAGAAG+AGG | - | chr3_4:69923140-69923159 | None:intergenic | 35.0% | |
TTTCATATTCTGAGCGATTG+GGG | - | chr3_4:69923175-69923194 | None:intergenic | 35.0% | |
TGAAGAGAAAATGTTGAGAC+TGG | - | chr3_4:69923287-69923306 | None:intergenic | 35.0% | |
CTAATAATTGAAGACGGAGA+AGG | - | chr3_4:69923370-69923389 | None:intergenic | 35.0% | |
CTTCTCCGTCTTCAATTATT+AGG | + | chr3_4:69923368-69923387 | Msa0518090:five_prime_UTR | 35.0% | |
CAACAAACAGAAACAAACTC+TGG | - | chr3_4:69923503-69923522 | None:intergenic | 35.0% | |
!! | AAGCTGTTTCTGTTTCTGTT+TGG | + | chr3_4:69923561-69923580 | Msa0518090:five_prime_UTR | 35.0% |
!! | AGCTGTTTCTGTTTCTGTTT+GGG | + | chr3_4:69923562-69923581 | Msa0518090:five_prime_UTR | 35.0% |
!! | TTTCTGTTTCTGTTTGGGTT+TGG | + | chr3_4:69923567-69923586 | Msa0518090:five_prime_UTR | 35.0% |
GTTCAGCAATGACATGAAAA+GGG | - | chr3_4:69923714-69923733 | None:intergenic | 35.0% | |
AGTTCAGCAATGACATGAAA+AGG | - | chr3_4:69923715-69923734 | None:intergenic | 35.0% | |
ACATTTACAAGTATGCTCCA+TGG | + | chr3_4:69923737-69923756 | Msa0518090:CDS | 35.0% | |
CATTTACAAGTATGCTCCAT+GGG | + | chr3_4:69923738-69923757 | Msa0518090:CDS | 35.0% | |
GATAAATCTTTGCTCAAGAG+TGG | + | chr3_4:69923883-69923902 | Msa0518090:intron | 35.0% | |
GCAATATTTCTTTCCAACAG+GGG | - | chr3_4:69923932-69923951 | None:intergenic | 35.0% | |
GTGCAATATTTCTTTCCAAC+AGG | - | chr3_4:69923934-69923953 | None:intergenic | 35.0% | |
GTTGGAAAGAAATATTGCAC+GGG | + | chr3_4:69923934-69923953 | Msa0518090:CDS | 35.0% | |
TGAACATAAGAATCAAGTGG+TGG | + | chr3_4:69924020-69924039 | Msa0518090:CDS | 35.0% | |
GAACATAAGAATCAAGTGGT+GGG | + | chr3_4:69924021-69924040 | Msa0518090:CDS | 35.0% | |
AACATAAGAATCAAGTGGTG+GGG | + | chr3_4:69924022-69924041 | Msa0518090:CDS | 35.0% | |
!! | TGTTTTGTTGGATGTACGTA+TGG | + | chr3_4:69924210-69924229 | Msa0518090:intron | 35.0% |
CTCAAGCTGTAAATGATTCA+TGG | + | chr3_4:69924395-69924414 | Msa0518090:intron | 35.0% | |
AGTAACATCCATACACACAA+TGG | - | chr3_4:69924561-69924580 | None:intergenic | 35.0% | |
!!! | ATTTTTTCCCAAAGGTCTGT+TGG | + | chr3_4:69924760-69924779 | Msa0518090:intron | 35.0% |
!!! | TTTTTTCCCAAAGGTCTGTT+GGG | + | chr3_4:69924761-69924780 | Msa0518090:intron | 35.0% |
!! | AGGGCTTTGAAAAAAATGGA+AGG | + | chr3_4:69924818-69924837 | Msa0518090:intron | 35.0% |
AAAAAAATGGAAGGATGGAG+TGG | + | chr3_4:69924827-69924846 | Msa0518090:intron | 35.0% | |
AACTAAACCCCTCCTAATTT+GGG | + | chr3_4:69924940-69924959 | Msa0518090:intron | 35.0% | |
! | AATTTGAGTTCCCCCAAATT+AGG | - | chr3_4:69924955-69924974 | None:intergenic | 35.0% |
!!! | TATTGGAGGAGTATTTTGGA+GGG | + | chr3_4:69924976-69924995 | Msa0518090:intron | 35.0% |
CCTAATACAAGTCCTCTTTA+GGG | - | chr3_4:69925188-69925207 | None:intergenic | 35.0% | |
CCTAAAGAGGACTTGTATTA+GGG | + | chr3_4:69925186-69925205 | Msa0518090:intron | 35.0% | |
!!! | TTGACTGTTTTAGCATGACT+TGG | + | chr3_4:69925229-69925248 | Msa0518090:intron | 35.0% |
! | GACTTGGTATATTCTTAGTC+TGG | + | chr3_4:69925245-69925264 | Msa0518090:intron | 35.0% |
! | AGAACTCCTATGTGATTTGT+AGG | + | chr3_4:69925349-69925368 | Msa0518090:intron | 35.0% |
! | GAACTCCTATGTGATTTGTA+GGG | + | chr3_4:69925350-69925369 | Msa0518090:intron | 35.0% |
! | TGTAGGGTATTTCAAAAGGA+AGG | + | chr3_4:69925366-69925385 | Msa0518090:CDS | 35.0% |
TCCCAGTCTTTCTCATTAAA+TGG | - | chr3_4:69925426-69925445 | None:intergenic | 35.0% | |
TTTCGACGATGAAAATGCAT+TGG | + | chr3_4:69925683-69925702 | Msa0518090:CDS | 35.0% | |
! | AGATCCATTGTTTTCATTCC+CGG | - | chr3_4:69925709-69925728 | None:intergenic | 35.0% |
GAATGAAAACAATGGATCTG+AGG | + | chr3_4:69925710-69925729 | Msa0518090:CDS | 35.0% | |
! | GCACTTTTAGTGTTATGCAA+GGG | + | chr3_4:69926005-69926024 | Msa0518090:intron | 35.0% |
! | TTATAGGTCATGTGGGTTTT+GGG | - | chr3_4:69926147-69926166 | None:intergenic | 35.0% |
! | TTTATAGGTCATGTGGGTTT+TGG | - | chr3_4:69926148-69926167 | None:intergenic | 35.0% |
ATATGACTACCTCCAATATC+TGG | + | chr3_4:69926382-69926401 | Msa0518090:intron | 35.0% | |
AAATGACTGTTCACCAGAAA+TGG | - | chr3_4:69926415-69926434 | None:intergenic | 35.0% | |
AAGATAACAAAGAGAAGGAG+AGG | - | chr3_4:69926461-69926480 | None:intergenic | 35.0% | |
TGCTATCTTTCATTTGCTCT+CGG | + | chr3_4:69926497-69926516 | Msa0518090:intron | 35.0% | |
AGTCTTAACAGTAGCATAAG+TGG | - | chr3_4:69926552-69926571 | None:intergenic | 35.0% | |
!! | TCATTGGTCTTAACATATGC+TGG | + | chr3_4:69926602-69926621 | Msa0518090:intron | 35.0% |
TGCAAGTGCAATTAATCAGA+AGG | - | chr3_4:69926829-69926848 | None:intergenic | 35.0% | |
TTAAATGTTCTACATGGCCT+AGG | + | chr3_4:69926879-69926898 | Msa0518090:intron | 35.0% | |
TGTCTGCTTCGTTGTTATAT+TGG | + | chr3_4:69926991-69927010 | Msa0518090:intron | 35.0% | |
CTTCGTTGTTATATTGGACT+TGG | + | chr3_4:69926997-69927016 | Msa0518090:intron | 35.0% | |
! | TTCAGCCTTCCAGTTTTTAA+TGG | - | chr3_4:69927221-69927240 | None:intergenic | 35.0% |
ATGTGATTATGTTCGACAGA+AGG | + | chr3_4:69927410-69927429 | Msa0518090:intron | 35.0% | |
TATTAACAGCTTGGTTGGAT+TGG | + | chr3_4:69927512-69927531 | Msa0518090:CDS | 35.0% | |
AAGCAACTCAAAGAAATCAG+GGG | - | chr3_4:69927628-69927647 | None:intergenic | 35.0% | |
CAAGCAACTCAAAGAAATCA+GGG | - | chr3_4:69927629-69927648 | None:intergenic | 35.0% | |
TCAAGCAACTCAAAGAAATC+AGG | - | chr3_4:69927630-69927649 | None:intergenic | 35.0% | |
CCACATACAATGTCTTACAA+CGG | - | chr3_4:69927838-69927857 | None:intergenic | 35.0% | |
GCTTGATCACAGTTATTTGT+CGG | + | chr3_4:69927932-69927951 | Msa0518090:three_prime_UTR | 35.0% | |
! | AAAATTGTTGCTTGGTGGAG+GGG | - | chr3_4:69922990-69923009 | None:intergenic | 40.0% |
! | GAAAATTGTTGCTTGGTGGA+GGG | - | chr3_4:69922991-69923010 | None:intergenic | 40.0% |
ATGAAGAAGAGGAAGCTTAC+CGG | - | chr3_4:69923129-69923148 | None:intergenic | 40.0% | |
TTGAGACTGGAAAGCTACAA+CGG | - | chr3_4:69923274-69923293 | None:intergenic | 40.0% | |
AGAAGGAAGATCAAGTCCAA+TGG | - | chr3_4:69923353-69923372 | None:intergenic | 40.0% | |
! | GTTTGTTGAATTTGGGGGTT+TGG | + | chr3_4:69923515-69923534 | Msa0518090:five_prime_UTR | 40.0% |
! | TTTGGGGGTTTGGTAGTTTA+AGG | + | chr3_4:69923525-69923544 | Msa0518090:five_prime_UTR | 40.0% |
ATTACCAGCTCAACATCAGT+GGG | - | chr3_4:69923655-69923674 | None:intergenic | 40.0% | |
AGTTTCGTTGAATCCAAACC+TGG | - | chr3_4:69923769-69923788 | None:intergenic | 40.0% | |
! | TCAAGAGTGGTGATTTGCAA+TGG | + | chr3_4:69923896-69923915 | Msa0518090:CDS | 40.0% |
GAAAGAAATATTGCACGGGA+GGG | + | chr3_4:69923938-69923957 | Msa0518090:CDS | 40.0% | |
TAAAGGAGACCGAACTGATT+GGG | + | chr3_4:69924083-69924102 | Msa0518090:CDS | 40.0% | |
CATGCATAACCCAATCAGTT+CGG | - | chr3_4:69924095-69924114 | None:intergenic | 40.0% | |
ATTCAAAGATGTCGTACCTG+TGG | - | chr3_4:69924159-69924178 | None:intergenic | 40.0% | |
AGGTACGACATCTTTGAATG+AGG | + | chr3_4:69924160-69924179 | Msa0518090:intron | 40.0% | |
! | TTGGTTGCGAACTGTTTTGT+TGG | + | chr3_4:69924198-69924217 | Msa0518090:intron | 40.0% |
GATGTACGTATGGCGTTTAA+TGG | + | chr3_4:69924220-69924239 | Msa0518090:intron | 40.0% | |
TGGCTTTCACGTGTAACAAA+GGG | - | chr3_4:69924286-69924305 | None:intergenic | 40.0% | |
GGACAGTGAGAGTAATAAGA+TGG | - | chr3_4:69924473-69924492 | None:intergenic | 40.0% | |
! | TTTTTCCCAAAGGTCTGTTG+GGG | + | chr3_4:69924762-69924781 | Msa0518090:intron | 40.0% |
!! | GGAGAGGGCTTTGAAAAAAA+TGG | + | chr3_4:69924814-69924833 | Msa0518090:intron | 40.0% |
! | AAGGAATGAAGAGGTTTGGT+AGG | + | chr3_4:69924850-69924869 | Msa0518090:intron | 40.0% |
! | AGGAATGAAGAGGTTTGGTA+GGG | + | chr3_4:69924851-69924870 | Msa0518090:intron | 40.0% |
CAAATTAGGAGGGGTTTAGT+TGG | - | chr3_4:69924941-69924960 | None:intergenic | 40.0% | |
CAACTAAACCCCTCCTAATT+TGG | + | chr3_4:69924939-69924958 | Msa0518090:intron | 40.0% | |
ACTAAACCCCTCCTAATTTG+GGG | + | chr3_4:69924941-69924960 | Msa0518090:intron | 40.0% | |
TGGGGGAACTCAAATTGTAT+TGG | + | chr3_4:69924959-69924978 | Msa0518090:intron | 40.0% | |
GGGAACTCAAATTGTATTGG+AGG | + | chr3_4:69924962-69924981 | Msa0518090:intron | 40.0% | |
!!! | GTATTGGAGGAGTATTTTGG+AGG | + | chr3_4:69924975-69924994 | Msa0518090:intron | 40.0% |
!!! | AGGAGTATTTTGGAGGGTTT+TGG | + | chr3_4:69924982-69925001 | Msa0518090:intron | 40.0% |
CCCTAAAGAGGACTTGTATT+AGG | + | chr3_4:69925185-69925204 | Msa0518090:intron | 40.0% | |
CCCTAATACAAGTCCTCTTT+AGG | - | chr3_4:69925189-69925208 | None:intergenic | 40.0% | |
GTATTTCAAAAGGAAGGTCC+TGG | + | chr3_4:69925372-69925391 | Msa0518090:CDS | 40.0% | |
TCAGAAATATGGCTTGAGCT+AGG | - | chr3_4:69925519-69925538 | None:intergenic | 40.0% | |
ATCGTCGAAAATAGCAAGCA+TGG | - | chr3_4:69925673-69925692 | None:intergenic | 40.0% | |
AAGTCAGAGCTACCAAAGTT+GGG | - | chr3_4:69925793-69925812 | None:intergenic | 40.0% | |
AAAGTCAGAGCTACCAAAGT+TGG | - | chr3_4:69925794-69925813 | None:intergenic | 40.0% | |
AAAAAGAGGAACAGTTCACG+AGG | - | chr3_4:69925886-69925905 | None:intergenic | 40.0% | |
TGCTGAATTGCATGACACAT+TGG | + | chr3_4:69925983-69926002 | Msa0518090:intron | 40.0% | |
! | GGCACTTTTAGTGTTATGCA+AGG | + | chr3_4:69926004-69926023 | Msa0518090:intron | 40.0% |
ACCAATCTCATCACCAACAA+TGG | + | chr3_4:69926053-69926072 | Msa0518090:intron | 40.0% | |
AATGGAAGCTTGCCAGATAT+TGG | - | chr3_4:69926397-69926416 | None:intergenic | 40.0% | |
AGGAGAGGTTGCCAAAAATA+GGG | - | chr3_4:69926446-69926465 | None:intergenic | 40.0% | |
AAGGAGAGGTTGCCAAAAAT+AGG | - | chr3_4:69926447-69926466 | None:intergenic | 40.0% | |
GAGAGCAAATGAAAGATAGC+AGG | - | chr3_4:69926498-69926517 | None:intergenic | 40.0% | |
GGAAACTAAGACAAAAGAGG+CGG | - | chr3_4:69926702-69926721 | None:intergenic | 40.0% | |
TCCAATGTTCTAATGGCAGA+TGG | - | chr3_4:69926729-69926748 | None:intergenic | 40.0% | |
AAAAATTTGGGGGCAAGAAG+TGG | + | chr3_4:69926779-69926798 | Msa0518090:intron | 40.0% | |
ACTCACTCCAAAGTGATTAG+TGG | + | chr3_4:69926853-69926872 | Msa0518090:intron | 40.0% | |
CTCACTCCAAAGTGATTAGT+GGG | + | chr3_4:69926854-69926873 | Msa0518090:intron | 40.0% | |
TCACTCCAAAGTGATTAGTG+GGG | + | chr3_4:69926855-69926874 | Msa0518090:intron | 40.0% | |
TTAAGCCCCACTAATCACTT+TGG | - | chr3_4:69926863-69926882 | None:intergenic | 40.0% | |
TGGGGCTTAAATGTTCTACA+TGG | + | chr3_4:69926873-69926892 | Msa0518090:intron | 40.0% | |
CGTTGTTATATTGGACTTGG+TGG | + | chr3_4:69927000-69927019 | Msa0518090:intron | 40.0% | |
!! | ACTGTCTCTTTTGTTTAGGG+AGG | + | chr3_4:69927139-69927158 | Msa0518090:intron | 40.0% |
!! | CTGTCTCTTTTGTTTAGGGA+GGG | + | chr3_4:69927140-69927159 | Msa0518090:intron | 40.0% |
GGAGATATTAACAGCTTGGT+TGG | + | chr3_4:69927507-69927526 | Msa0518090:CDS | 40.0% | |
AGCAACTCAAAGAAATCAGG+GGG | - | chr3_4:69927627-69927646 | None:intergenic | 40.0% | |
TGTTTAGTCTGCCAGGATAA+TGG | - | chr3_4:69927663-69927682 | None:intergenic | 40.0% | |
TTCTGAGTTACTTGACCTAG+AGG | + | chr3_4:69927694-69927713 | Msa0518090:three_prime_UTR | 40.0% | |
TGTTTAGTCTGCCAGGATAA+TGG | - | chr3_4:69927663-69927682 | None:intergenic | 40.0% | |
CCGTTGTAAGACATTGTATG+TGG | + | chr3_4:69927835-69927854 | Msa0518090:three_prime_UTR | 40.0% | |
! | GGAAAATTGTTGCTTGGTGG+AGG | - | chr3_4:69922992-69923011 | None:intergenic | 45.0% |
AGAGTGTATGAAGCACGGAA+GGG | - | chr3_4:69923053-69923072 | None:intergenic | 45.0% | |
! | GAGAGAGAGTGTATGAAGCA+CGG | - | chr3_4:69923058-69923077 | None:intergenic | 45.0% |
ACATAAAATCGCCTCGTTCG+CGG | + | chr3_4:69923086-69923105 | Msa0518090:five_prime_UTR | 45.0% | |
AAGAAAAGTCATCGGCACAG+TGG | - | chr3_4:69923226-69923245 | None:intergenic | 45.0% | |
TGAATAACAATCGTCGCAGC+AGG | + | chr3_4:69923307-69923326 | Msa0518090:five_prime_UTR | 45.0% | |
GGAATATCTTCTTCCGCCAT+TGG | + | chr3_4:69923334-69923353 | Msa0518090:five_prime_UTR | 45.0% | |
AGGAAGATCAAGTCCAATGG+CGG | - | chr3_4:69923350-69923369 | None:intergenic | 45.0% | |
! | TGACATTGCTGTTGCGCTTA+AGG | + | chr3_4:69923476-69923495 | Msa0518090:five_prime_UTR | 45.0% |
TTACCAGCTCAACATCAGTG+GGG | - | chr3_4:69923654-69923673 | None:intergenic | 45.0% | |
CATTACCAGCTCAACATCAG+TGG | - | chr3_4:69923656-69923675 | None:intergenic | 45.0% | |
TGGTACTTCTTTACCCCTGT+TGG | + | chr3_4:69923916-69923935 | Msa0518090:CDS | 45.0% | |
GGAAAGAAATATTGCACGGG+AGG | + | chr3_4:69923937-69923956 | Msa0518090:CDS | 45.0% | |
ATGAATCGGGCAACAGAAGT+AGG | + | chr3_4:69923964-69923983 | Msa0518090:CDS | 45.0% | |
TGAATCGGGCAACAGAAGTA+GGG | + | chr3_4:69923965-69923984 | Msa0518090:CDS | 45.0% | |
!! | TAGGGTACTGGAAGACTACA+GGG | + | chr3_4:69923983-69924002 | Msa0518090:CDS | 45.0% |
TTTGCCAGTGTGAAACACCA+GGG | - | chr3_4:69924058-69924077 | None:intergenic | 45.0% | |
CAATCAGTTCGGTCTCCTTT+AGG | - | chr3_4:69924084-69924103 | None:intergenic | 45.0% | |
CTAAAGGAGACCGAACTGAT+TGG | + | chr3_4:69924082-69924101 | Msa0518090:CDS | 45.0% | |
GACAAAGACCTAGCTGACAA+TGG | + | chr3_4:69924129-69924148 | Msa0518090:CDS | 45.0% | |
! | CTGGCTTTCACGTGTAACAA+AGG | - | chr3_4:69924287-69924306 | None:intergenic | 45.0% |
! | AAGCACGCACGAAGTATCTA+CGG | - | chr3_4:69924421-69924440 | None:intergenic | 45.0% |
! | CGTGCTTACATAGCATTGAG+TGG | + | chr3_4:69924434-69924453 | Msa0518090:intron | 45.0% |
! | TTTTCCCAAAGGTCTGTTGG+GGG | + | chr3_4:69924763-69924782 | Msa0518090:intron | 45.0% |
TTGGGGGCTTATGGAGTTAT+GGG | + | chr3_4:69924779-69924798 | Msa0518090:intron | 45.0% | |
AAATGGAAGGATGGAGTGGA+AGG | + | chr3_4:69924831-69924850 | Msa0518090:intron | 45.0% | |
ATGGAGTGGAAGGAATGAAG+AGG | + | chr3_4:69924841-69924860 | Msa0518090:intron | 45.0% | |
GTGGAAGGAATGAAGAGGTT+TGG | + | chr3_4:69924846-69924865 | Msa0518090:intron | 45.0% | |
! | GGAATGAAGAGGTTTGGTAG+GGG | + | chr3_4:69924852-69924871 | Msa0518090:intron | 45.0% |
CTAAACCCCTCCTAATTTGG+GGG | + | chr3_4:69924942-69924961 | Msa0518090:intron | 45.0% | |
TGAGTTCCCCCAAATTAGGA+GGG | - | chr3_4:69924951-69924970 | None:intergenic | 45.0% | |
TTGAGTTCCCCCAAATTAGG+AGG | - | chr3_4:69924952-69924971 | None:intergenic | 45.0% | |
GTCTGTTCAGATGTTTCGAG+GGG | - | chr3_4:69925166-69925185 | None:intergenic | 45.0% | |
GGTCTGTTCAGATGTTTCGA+GGG | - | chr3_4:69925167-69925186 | None:intergenic | 45.0% | |
CATCTGAACAGACCCTAAAG+AGG | + | chr3_4:69925173-69925192 | Msa0518090:intron | 45.0% | |
CCAATACATCCACTTGCAGA+GGG | - | chr3_4:69925558-69925577 | None:intergenic | 45.0% | |
TCCAATACATCCACTTGCAG+AGG | - | chr3_4:69925559-69925578 | None:intergenic | 45.0% | |
CTATCAAGATTGATGCCCTC+TGG | + | chr3_4:69925597-69925616 | Msa0518090:CDS | 45.0% | |
CTTGATTGCCTAGAGCTGAA+GGG | - | chr3_4:69925632-69925651 | None:intergenic | 45.0% | |
! | GACGATGAAAATGCATTGGC+CGG | + | chr3_4:69925687-69925706 | Msa0518090:CDS | 45.0% |
! | ACGATGAAAATGCATTGGCC+GGG | + | chr3_4:69925688-69925707 | Msa0518090:CDS | 45.0% |
TTGGCCGGGAATGAAAACAA+TGG | + | chr3_4:69925702-69925721 | Msa0518090:CDS | 45.0% | |
AGTCAGAGCTACCAAAGTTG+GGG | - | chr3_4:69925792-69925811 | None:intergenic | 45.0% | |
TTAGTGTTATGCAAGGGCCA+TGG | + | chr3_4:69926011-69926030 | Msa0518090:intron | 45.0% | |
AGCAAGAATGGTAACCACCA+TGG | - | chr3_4:69926031-69926050 | None:intergenic | 45.0% | |
TGAGATTGGTGCAGCAAGAA+TGG | - | chr3_4:69926043-69926062 | None:intergenic | 45.0% | |
!! | GCCATTGTTGGTGATGAGAT+TGG | - | chr3_4:69926057-69926076 | None:intergenic | 45.0% |
AGAAATCGGATCATGAGCCA+TGG | + | chr3_4:69926112-69926131 | Msa0518090:intron | 45.0% | |
ATCTGGCAAGCTTCCATTTC+TGG | + | chr3_4:69926399-69926418 | Msa0518090:intron | 45.0% | |
!! | TAGCATAAGTGGACTAGTGG+AGG | - | chr3_4:69926541-69926560 | None:intergenic | 45.0% |
!! | CAGTAGCATAAGTGGACTAG+TGG | - | chr3_4:69926544-69926563 | None:intergenic | 45.0% |
! | ACATATGCTGGCAGTGCTTT+TGG | + | chr3_4:69926614-69926633 | Msa0518090:intron | 45.0% |
GTTCTAATGGCAGATGGCAT+AGG | - | chr3_4:69926723-69926742 | None:intergenic | 45.0% | |
GCCATCTGCCATTAGAACAT+TGG | + | chr3_4:69926725-69926744 | Msa0518090:intron | 45.0% | |
! | TTTTCCTGCCTTCGACTAGA+AGG | - | chr3_4:69926805-69926824 | None:intergenic | 45.0% |
TTTGCACAAAAGGGGTAGCA+AGG | - | chr3_4:69927042-69927061 | None:intergenic | 45.0% | |
!! | CTTTTGTTTAGGGAGGGTGA+AGG | + | chr3_4:69927146-69927165 | Msa0518090:intron | 45.0% |
CCTCTGCCATCTTGATTAGT+AGG | - | chr3_4:69927263-69927282 | None:intergenic | 45.0% | |
CCTACTAATCAAGATGGCAG+AGG | + | chr3_4:69927260-69927279 | Msa0518090:intron | 45.0% | |
!! | CGACAGAAGGTTGATAATCC+TGG | + | chr3_4:69927423-69927442 | Msa0518090:intron | 45.0% |
CCAAGCTGTTAATATCTCCC+AGG | - | chr3_4:69927506-69927525 | None:intergenic | 45.0% | |
CCTGGGAGATATTAACAGCT+TGG | + | chr3_4:69927503-69927522 | Msa0518090:CDS | 45.0% | |
! | AGCTTGGTTGGATTGGATGA+TGG | + | chr3_4:69927519-69927538 | Msa0518090:CDS | 45.0% |
!! | GTTGGATTGGATGATGGAAG+CGG | + | chr3_4:69927525-69927544 | Msa0518090:CDS | 45.0% |
! | GATGGAAGCGGTTTTTCCTA+TGG | + | chr3_4:69927537-69927556 | Msa0518090:CDS | 45.0% |
GCAACTCAAAGAAATCAGGG+GGG | - | chr3_4:69927626-69927645 | None:intergenic | 45.0% | |
!! | CTTTGAGTTGCTTGACCTAG+AGG | + | chr3_4:69927635-69927654 | Msa0518090:CDS | 45.0% |
TCCTGGCAGACTAAACATGA+TGG | + | chr3_4:69927666-69927685 | Msa0518090:CDS | 45.0% | |
TCCTGGCAGACTAAACATGA+TGG | + | chr3_4:69927666-69927685 | Msa0518090:CDS | 45.0% | |
TCCATCATGTTTAGTCTGCC+AGG | - | chr3_4:69927729-69927748 | None:intergenic | 45.0% | |
!! | AATTATTATTAGTATTAATA+AGG | + | chr3_4:69924673-69924692 | Msa0518090:intron | 5.0% |
!! | ATTATTATTAGTATTAATAA+GGG | + | chr3_4:69924674-69924693 | Msa0518090:intron | 5.0% |
!!! | ATATTTTTGTTAAAAAAATT+TGG | + | chr3_4:69926766-69926785 | Msa0518090:intron | 5.0% |
!!! | TATTTTTGTTAAAAAAATTT+GGG | + | chr3_4:69926767-69926786 | Msa0518090:intron | 5.0% |
TCTTCCGGTGAGTGAGTAAG+AGG | - | chr3_4:69922956-69922975 | None:intergenic | 50.0% | |
! | GAGAGTGTATGAAGCACGGA+AGG | - | chr3_4:69923054-69923073 | None:intergenic | 50.0% |
GGTGCTTTCTCATCCTTCTC+CGG | + | chr3_4:69923107-69923126 | Msa0518090:five_prime_UTR | 50.0% | |
AAGAGGAAGCTTACCGGAGA+AGG | - | chr3_4:69923123-69923142 | None:intergenic | 50.0% | |
GAGCGATTGGGGAAAATGCA+TGG | - | chr3_4:69923164-69923183 | None:intergenic | 50.0% | |
! | GCTACAACGGATGGTGATGA+TGG | - | chr3_4:69923261-69923280 | None:intergenic | 50.0% |
GACTGGAAAGCTACAACGGA+TGG | - | chr3_4:69923270-69923289 | None:intergenic | 50.0% | |
TATGCTCCATGGGATCTACC+AGG | + | chr3_4:69923748-69923767 | Msa0518090:CDS | 50.0% | |
TCCATGGGATCTACCAGGTT+TGG | + | chr3_4:69923753-69923772 | Msa0518090:intron | 50.0% | |
TCCAAACCTGGTAGATCCCA+TGG | - | chr3_4:69923757-69923776 | None:intergenic | 50.0% | |
AGAAATATTGCACGGGAGGG+AGG | + | chr3_4:69923941-69923960 | Msa0518090:CDS | 50.0% | |
!! | GTAGGGTACTGGAAGACTAC+AGG | + | chr3_4:69923982-69924001 | Msa0518090:CDS | 50.0% |
GTACTGGAAGACTACAGGGA+AGG | + | chr3_4:69923987-69924006 | Msa0518090:CDS | 50.0% | |
GGAAGACTACAGGGAAGGAT+AGG | + | chr3_4:69923992-69924011 | Msa0518090:CDS | 50.0% | |
AGAACCCTGGTGTTTCACAC+TGG | + | chr3_4:69924051-69924070 | Msa0518090:CDS | 50.0% | |
CTTTGCCAGTGTGAAACACC+AGG | - | chr3_4:69924059-69924078 | None:intergenic | 50.0% | |
CACACTGGCAAAGCTCCTAA+AGG | + | chr3_4:69924066-69924085 | Msa0518090:CDS | 50.0% | |
GTGGAACACCATTGTCAGCT+AGG | - | chr3_4:69924140-69924159 | None:intergenic | 50.0% | |
AGCTGACAATGGTGTTCCAC+AGG | + | chr3_4:69924140-69924159 | Msa0518090:CDS | 50.0% | |
TAAGCCCCCAACAGACCTTT+GGG | - | chr3_4:69924770-69924789 | None:intergenic | 50.0% | |
ATAAGCCCCCAACAGACCTT+TGG | - | chr3_4:69924771-69924790 | None:intergenic | 50.0% | |
AAAGGTCTGTTGGGGGCTTA+TGG | + | chr3_4:69924770-69924789 | Msa0518090:intron | 50.0% | |
GTTGGGGGCTTATGGAGTTA+TGG | + | chr3_4:69924778-69924797 | Msa0518090:intron | 50.0% | |
TGGGGGCTTATGGAGTTATG+GGG | + | chr3_4:69924780-69924799 | Msa0518090:intron | 50.0% | |
GCTTATGGAGTTATGGGGGA+GGG | + | chr3_4:69924785-69924804 | Msa0518090:intron | 50.0% | |
CTTATGGAGTTATGGGGGAG+GGG | + | chr3_4:69924786-69924805 | Msa0518090:intron | 50.0% | |
! | ATGAAGAGGTTTGGTAGGGG+AGG | + | chr3_4:69924855-69924874 | Msa0518090:intron | 50.0% |
! | TGAAGAGGTTTGGTAGGGGA+GGG | + | chr3_4:69924856-69924875 | Msa0518090:intron | 50.0% |
GAGGGGTTTAGTTGGTCCTT+GGG | - | chr3_4:69924933-69924952 | None:intergenic | 50.0% | |
GAGTTCCCCCAAATTAGGAG+GGG | - | chr3_4:69924950-69924969 | None:intergenic | 50.0% | |
TTCAGATGTTTCGAGGGGAG+AGG | - | chr3_4:69925161-69925180 | None:intergenic | 50.0% | |
GGGTCTGTTCAGATGTTTCG+AGG | - | chr3_4:69925168-69925187 | None:intergenic | 50.0% | |
CCATACTGTGCACCATTCCT+GGG | - | chr3_4:69925399-69925418 | None:intergenic | 50.0% | |
TCCATACTGTGCACCATTCC+TGG | - | chr3_4:69925400-69925419 | None:intergenic | 50.0% | |
GAAAGACTGGGATAGCGAAG+AGG | + | chr3_4:69925434-69925453 | Msa0518090:CDS | 50.0% | |
GAGCTAGGTAGAATGAGAGC+TGG | - | chr3_4:69925504-69925523 | None:intergenic | 50.0% | |
CCCTCTGCAAGTGGATGTAT+TGG | + | chr3_4:69925555-69925574 | Msa0518090:CDS | 50.0% | |
GCTTGATTGCCTAGAGCTGA+AGG | - | chr3_4:69925633-69925652 | None:intergenic | 50.0% | |
!! | TACCAAAGTTGGGGAGCATC+TGG | - | chr3_4:69925783-69925802 | None:intergenic | 50.0% |
CTCATCACCAACAATGGCGA+TGG | + | chr3_4:69926059-69926078 | Msa0518090:intron | 50.0% | |
CAATCTGCCATCGCCATTGT+TGG | - | chr3_4:69926069-69926088 | None:intergenic | 50.0% | |
!! | GTTTTGGGTCTGTCTAGCCA+TGG | - | chr3_4:69926132-69926151 | None:intergenic | 50.0% |
GGAAGCTTGCCAGATATTGG+AGG | - | chr3_4:69926394-69926413 | None:intergenic | 50.0% | |
AGAAGTGGCCTTCTAGTCGA+AGG | + | chr3_4:69926794-69926813 | Msa0518090:intron | 50.0% | |
!! | ACCTAGAGGTGCCATTATCC+TGG | + | chr3_4:69927649-69927668 | Msa0518090:CDS | 50.0% |
GCCATCATGTTTAGTCTGCC+AGG | - | chr3_4:69927670-69927689 | None:intergenic | 50.0% | |
!! | ACCTAGAGGTGCCATTATCC+TGG | + | chr3_4:69927649-69927668 | Msa0518090:CDS | 50.0% |
TCCGGTGAGTGAGTAAGAGG+TGG | - | chr3_4:69922953-69922972 | None:intergenic | 55.0% | |
GGGGTTGCTTCTCTCTCTTC+CGG | - | chr3_4:69922971-69922990 | None:intergenic | 55.0% | |
!! | ATGAGAAAGCACCGCGAACG+AGG | - | chr3_4:69923100-69923119 | None:intergenic | 55.0% |
ACAATCGTCGCAGCAGGCTT+TGG | + | chr3_4:69923313-69923332 | Msa0518090:five_prime_UTR | 55.0% | |
GTGGGGTGAAAACGAAACCC+TGG | - | chr3_4:69923637-69923656 | None:intergenic | 55.0% | |
TCACCCCACTGATGTTGAGC+TGG | + | chr3_4:69923648-69923667 | Msa0518090:CDS | 55.0% | |
GGGCAACAGAAGTAGGGTAC+TGG | + | chr3_4:69923971-69923990 | Msa0518090:CDS | 55.0% | |
GGTGGGGATGATAAGAACCC+TGG | + | chr3_4:69924038-69924057 | Msa0518090:CDS | 55.0% | |
GGGGGCTTATGGAGTTATGG+GGG | + | chr3_4:69924781-69924800 | Msa0518090:intron | 55.0% | |
GGCTTATGGAGTTATGGGGG+AGG | + | chr3_4:69924784-69924803 | Msa0518090:intron | 55.0% | |
GTTTGGTAGGGGAGGGCTTT+GGG | + | chr3_4:69924863-69924882 | Msa0518090:intron | 55.0% | |
TTTGGTAGGGGAGGGCTTTG+GGG | + | chr3_4:69924864-69924883 | Msa0518090:intron | 55.0% | |
GAAACTTGGTATCCGGCCCA+AGG | + | chr3_4:69924914-69924933 | Msa0518090:intron | 55.0% | |
GGTTTAGTTGGTCCTTGGGC+CGG | - | chr3_4:69924929-69924948 | None:intergenic | 55.0% | |
GGAGGGGTTTAGTTGGTCCT+TGG | - | chr3_4:69924934-69924953 | None:intergenic | 55.0% | |
GATGTTTCGAGGGGAGAGGA+TGG | - | chr3_4:69925157-69925176 | None:intergenic | 55.0% | |
AAAAGGAAGGTCCTGGTCCC+AGG | + | chr3_4:69925379-69925398 | Msa0518090:CDS | 55.0% | |
CCCAGGAATGGTGCACAGTA+TGG | + | chr3_4:69925396-69925415 | Msa0518090:CDS | 55.0% | |
GTGCAGACACAGCAGCAACA+GGG | - | chr3_4:69925482-69925501 | None:intergenic | 55.0% | |
GACATGCATCCCTCTGCAAG+TGG | + | chr3_4:69925546-69925565 | Msa0518090:CDS | 55.0% | |
ACGACACACCCTTCAGCTCT+AGG | + | chr3_4:69925621-69925640 | Msa0518090:CDS | 55.0% | |
TGCCAGATGCTCCCCAACTT+TGG | + | chr3_4:69925778-69925797 | Msa0518090:intron | 55.0% | |
GTGTTATGCAAGGGCCATGG+TGG | + | chr3_4:69926014-69926033 | Msa0518090:intron | 55.0% | |
! | GCCAGGATAATGGCACCTCT+AGG | - | chr3_4:69927653-69927672 | None:intergenic | 55.0% |
! | GCCAGGATAATGGCACCTCT+AGG | - | chr3_4:69927653-69927672 | None:intergenic | 55.0% |
GCACGGGAGGGAGGATGAAT+CGG | + | chr3_4:69923950-69923969 | Msa0518090:CDS | 60.0% | |
CACGGGAGGGAGGATGAATC+GGG | + | chr3_4:69923951-69923970 | Msa0518090:CDS | 60.0% | |
AGTTATGGGGGAGGGGAGAG+AGG | + | chr3_4:69924793-69924812 | Msa0518090:intron | 60.0% | |
! | GGTTTGGTAGGGGAGGGCTT+TGG | + | chr3_4:69924862-69924881 | Msa0518090:intron | 60.0% |
!! | GAGAGGATGGCTTTGGGAGC+AGG | - | chr3_4:69925144-69925163 | None:intergenic | 60.0% |
CGAGGGGAGAGGATGGCTTT+GGG | - | chr3_4:69925150-69925169 | None:intergenic | 60.0% | |
TCGAGGGGAGAGGATGGCTT+TGG | - | chr3_4:69925151-69925170 | None:intergenic | 60.0% | |
GAAGGTCCTGGTCCCAGGAA+TGG | + | chr3_4:69925384-69925403 | Msa0518090:CDS | 60.0% | |
TGTGCACCATTCCTGGGACC+AGG | - | chr3_4:69925393-69925412 | None:intergenic | 60.0% | |
GGTGCAGACACAGCAGCAAC+AGG | - | chr3_4:69925483-69925502 | None:intergenic | 60.0% | |
! | GAAGGGTGTGTCGTGCCAGA+GGG | - | chr3_4:69925615-69925634 | None:intergenic | 60.0% |
! | TGAAGGGTGTGTCGTGCCAG+AGG | - | chr3_4:69925616-69925635 | None:intergenic | 60.0% |
GTGGCCTTCTAGTCGAAGGC+AGG | + | chr3_4:69926798-69926817 | Msa0518090:intron | 60.0% | |
TGGGGGAGGGGAGAGAGGAG+AGG | + | chr3_4:69924798-69924817 | Msa0518090:intron | 70.0% | |
GGGGGAGGGGAGAGAGGAGA+GGG | + | chr3_4:69924799-69924818 | Msa0518090:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_4 | gene | 69922950 | 69927969 | 69922950 | ID=Msa0518090;Name=Msa0518090 |
chr3_4 | mRNA | 69922950 | 69927969 | 69922950 | ID=Msa0518090-mRNA-1;Parent=Msa0518090;Name=Msa0518090-mRNA-1;_AED=0.04;_eAED=0.04;_QI=570|1|1|1|0.75|0.6|5|277|360 |
chr3_4 | exon | 69922950 | 69923128 | 69922950 | ID=Msa0518090-mRNA-1:exon:18722;Parent=Msa0518090-mRNA-1 |
chr3_4 | exon | 69923219 | 69923769 | 69923219 | ID=Msa0518090-mRNA-1:exon:18723;Parent=Msa0518090-mRNA-1 |
chr3_4 | exon | 69923884 | 69924161 | 69923884 | ID=Msa0518090-mRNA-1:exon:18724;Parent=Msa0518090-mRNA-1 |
chr3_4 | exon | 69925351 | 69925731 | 69925351 | ID=Msa0518090-mRNA-1:exon:18725;Parent=Msa0518090-mRNA-1 |
chr3_4 | exon | 69927429 | 69927969 | 69927429 | ID=Msa0518090-mRNA-1:exon:18726;Parent=Msa0518090-mRNA-1 |
chr3_4 | five_prime_UTR | 69922950 | 69923128 | 69922950 | ID=Msa0518090-mRNA-1:five_prime_utr;Parent=Msa0518090-mRNA-1 |
chr3_4 | five_prime_UTR | 69923219 | 69923609 | 69923219 | ID=Msa0518090-mRNA-1:five_prime_utr;Parent=Msa0518090-mRNA-1 |
chr3_4 | CDS | 69923610 | 69923769 | 69923610 | ID=Msa0518090-mRNA-1:cds;Parent=Msa0518090-mRNA-1 |
chr3_4 | CDS | 69923884 | 69924161 | 69923884 | ID=Msa0518090-mRNA-1:cds;Parent=Msa0518090-mRNA-1 |
chr3_4 | CDS | 69925351 | 69925731 | 69925351 | ID=Msa0518090-mRNA-1:cds;Parent=Msa0518090-mRNA-1 |
chr3_4 | CDS | 69927429 | 69927692 | 69927429 | ID=Msa0518090-mRNA-1:cds;Parent=Msa0518090-mRNA-1 |
chr3_4 | three_prime_UTR | 69927693 | 69927969 | 69927693 | ID=Msa0518090-mRNA-1:three_prime_utr;Parent=Msa0518090-mRNA-1 |
Gene Sequence |
Protein sequence |