Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1313050 | XP_013444245.1 | 94.855 | 447 | 23 | 0 | 1 | 447 | 1 | 447 | 0.0 | 860 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1313050 | sp|O04373|ILL4_ARATH | 66.368 | 446 | 142 | 5 | 3 | 447 | 2 | 440 | 0.0 | 602 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1313050 | Q0GXX4 | 94.855 | 447 | 23 | 0 | 1 | 447 | 1 | 447 | 0.0 | 860 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014410 | Msa1313050 | 0.869975 | 2.069546e-66 | -8.615850e-47 |
| Msa0035400 | Msa1313050 | 0.873195 | 1.774110e-67 | -8.615850e-47 |
| Msa0044710 | Msa1313050 | 0.807814 | 4.206640e-50 | -8.615850e-47 |
| Msa0050720 | Msa1313050 | 0.834647 | 2.655452e-56 | -8.615850e-47 |
| Msa0050770 | Msa1313050 | 0.843324 | 1.503048e-58 | -8.615850e-47 |
| Msa0064550 | Msa1313050 | 0.849968 | 2.299021e-60 | -8.615850e-47 |
| Msa0092960 | Msa1313050 | 0.845646 | 3.566755e-59 | -8.615850e-47 |
| Msa0108070 | Msa1313050 | 0.822076 | 2.873723e-53 | -8.615850e-47 |
| Msa0109490 | Msa1313050 | 0.856242 | 3.673444e-62 | -8.615850e-47 |
| Msa0111310 | Msa1313050 | 0.838618 | 2.584631e-57 | -8.615850e-47 |
| Msa0605170 | Msa1313050 | 0.805196 | 1.500164e-49 | -8.615850e-47 |
| Msa0605250 | Msa1313050 | 0.806729 | 7.140384e-50 | -8.615850e-47 |
| Msa0628100 | Msa1313050 | 0.803382 | 3.580221e-49 | -8.615850e-47 |
| Msa0640380 | Msa1313050 | 0.825680 | 4.107000e-54 | -8.615850e-47 |
| Msa0678820 | Msa1313050 | 0.819480 | 1.135983e-52 | -8.615850e-47 |
| Msa0705420 | Msa1313050 | 0.832348 | 9.949603e-56 | -8.615850e-47 |
| Msa0709660 | Msa1313050 | 0.856072 | 4.119417e-62 | -8.615850e-47 |
| Msa0715680 | Msa1313050 | 0.818425 | 1.973116e-52 | -8.615850e-47 |
| Msa0740210 | Msa1313050 | 0.832921 | 7.171027e-56 | -8.615850e-47 |
| Msa0744500 | Msa1313050 | 0.815952 | 7.101274e-52 | -8.615850e-47 |
| Msa0781390 | Msa1313050 | 0.831013 | 2.122614e-55 | -8.615850e-47 |
| Msa0788360 | Msa1313050 | 0.816908 | 4.339684e-52 | -8.615850e-47 |
| Msa0792880 | Msa1313050 | 0.802105 | 6.568351e-49 | -8.615850e-47 |
| Msa0801360 | Msa1313050 | 0.848269 | 6.825038e-60 | -8.615850e-47 |
| Msa0818440 | Msa1313050 | 0.836133 | 1.118466e-56 | -8.615850e-47 |
| Msa0818550 | Msa1313050 | 0.839395 | 1.625861e-57 | -8.615850e-47 |
| Msa0820520 | Msa1313050 | 0.831504 | 1.607768e-55 | -8.615850e-47 |
| Msa0826650 | Msa1313050 | 0.812513 | 4.081727e-51 | -8.615850e-47 |
| Msa0828570 | Msa1313050 | 0.848259 | 6.867434e-60 | -8.615850e-47 |
| Msa0828900 | Msa1313050 | 0.802962 | 4.374113e-49 | -8.615850e-47 |
| Msa0829060 | Msa1313050 | 0.802060 | 6.712288e-49 | -8.615850e-47 |
| Msa0839830 | Msa1313050 | 0.843689 | 1.200994e-58 | -8.615850e-47 |
| Msa0138390 | Msa1313050 | -0.804967 | 1.675313e-49 | -8.615850e-47 |
| Msa0142420 | Msa1313050 | 0.823020 | 1.734100e-53 | -8.615850e-47 |
| Msa0154240 | Msa1313050 | 0.836004 | 1.206295e-56 | -8.615850e-47 |
| Msa0154270 | Msa1313050 | 0.862175 | 6.102273e-64 | -8.615850e-47 |
| Msa0155610 | Msa1313050 | 0.830779 | 2.422681e-55 | -8.615850e-47 |
| Msa0173000 | Msa1313050 | 0.807938 | 3.957116e-50 | -8.615850e-47 |
| Msa0178350 | Msa1313050 | 0.844888 | 5.717871e-59 | -8.615850e-47 |
| Msa0182930 | Msa1313050 | 0.806646 | 7.434764e-50 | -8.615850e-47 |
| Msa0185640 | Msa1313050 | -0.847471 | 1.132553e-59 | -8.615850e-47 |
| Msa0198440 | Msa1313050 | 0.824740 | 6.851317e-54 | -8.615850e-47 |
| Msa0224370 | Msa1313050 | 0.808697 | 2.726358e-50 | -8.615850e-47 |
| Msa0225880 | Msa1313050 | 0.832766 | 7.840153e-56 | -8.615850e-47 |
| Msa0226620 | Msa1313050 | -0.806288 | 8.847176e-50 | -8.615850e-47 |
| Msa1228310 | Msa1313050 | 0.802877 | 4.553224e-49 | -8.615850e-47 |
| Msa1232270 | Msa1313050 | 0.929549 | 5.924887e-93 | -8.615850e-47 |
| Msa1241820 | Msa1313050 | 0.823856 | 1.105604e-53 | -8.615850e-47 |
| Msa1252070 | Msa1313050 | 0.811980 | 5.336077e-51 | -8.615850e-47 |
| Msa1252300 | Msa1313050 | 0.876353 | 1.494120e-68 | -8.615850e-47 |
| Msa1256540 | Msa1313050 | -0.847331 | 1.237242e-59 | -8.615850e-47 |
| Msa1260130 | Msa1313050 | 0.801005 | 1.104405e-48 | -8.615850e-47 |
| Msa1262920 | Msa1313050 | 0.807296 | 5.417126e-50 | -8.615850e-47 |
| Msa1270770 | Msa1313050 | 0.924035 | 1.205382e-89 | -8.615850e-47 |
| Msa1282920 | Msa1313050 | 0.810797 | 9.638665e-51 | -8.615850e-47 |
| Msa1296960 | Msa1313050 | -0.837732 | 4.370536e-57 | -8.615850e-47 |
| Msa1313050 | Msa1326400 | 0.800741 | 1.249893e-48 | -8.615850e-47 |
| Msa1313050 | Msa1354090 | 0.802581 | 5.240990e-49 | -8.615850e-47 |
| Msa1313050 | Msa1391490 | 0.820857 | 5.494052e-53 | -8.615850e-47 |
| Msa1313050 | Msa1394900 | 0.816883 | 4.396300e-52 | -8.615850e-47 |
| Msa1313050 | Msa1398800 | 0.822131 | 2.791413e-53 | -8.615850e-47 |
| Msa1313050 | Msa1421870 | 0.822531 | 2.253504e-53 | -8.615850e-47 |
| Msa1313050 | Msa1427830 | 0.816253 | 6.084453e-52 | -8.615850e-47 |
| Msa1313050 | Msa1434660 | 0.803685 | 3.098627e-49 | -8.615850e-47 |
| Msa1313050 | Msa1440610 | 0.831019 | 2.116171e-55 | -8.615850e-47 |
| Msa1313050 | Msa1454110 | 0.802305 | 5.974171e-49 | -8.615850e-47 |
| Msa0366870 | Msa1313050 | 0.801443 | 8.982367e-49 | -8.615850e-47 |
| Msa0377280 | Msa1313050 | 0.831745 | 1.402132e-55 | -8.615850e-47 |
| Msa0377860 | Msa1313050 | -0.819337 | 1.224495e-52 | -8.615850e-47 |
| Msa0377930 | Msa1313050 | -0.820341 | 7.219613e-53 | -8.615850e-47 |
| Msa0384530 | Msa1313050 | 0.815260 | 1.012492e-51 | -8.615850e-47 |
| Msa0401340 | Msa1313050 | 0.803834 | 2.884787e-49 | -8.615850e-47 |
| Msa0404690 | Msa1313050 | 0.833295 | 5.790886e-56 | -8.615850e-47 |
| Msa0412190 | Msa1313050 | 0.841460 | 4.690027e-58 | -8.615850e-47 |
| Msa0418430 | Msa1313050 | 0.831067 | 2.059800e-55 | -8.615850e-47 |
| Msa0435010 | Msa1313050 | 0.858452 | 8.158450e-63 | -8.615850e-47 |
| Msa0448120 | Msa1313050 | 0.814568 | 1.441850e-51 | -8.615850e-47 |
| Msa0456760 | Msa1313050 | 0.807377 | 5.206427e-50 | -8.615850e-47 |
| Msa0462590 | Msa1313050 | 0.846010 | 2.840690e-59 | -8.615850e-47 |
| Msa0465800 | Msa1313050 | 0.814089 | 1.839849e-51 | -8.615850e-47 |
| Msa0472740 | Msa1313050 | 0.814814 | 1.271582e-51 | -8.615850e-47 |
| Msa0473850 | Msa1313050 | -0.804226 | 2.391111e-49 | -8.615850e-47 |
| Msa0475240 | Msa1313050 | 0.806769 | 7.003194e-50 | -8.615850e-47 |
| Msa0476780 | Msa1313050 | 0.807265 | 5.500689e-50 | -8.615850e-47 |
| Msa0479030 | Msa1313050 | 0.838135 | 3.442930e-57 | -8.615850e-47 |
| Msa0479100 | Msa1313050 | 0.845661 | 3.533259e-59 | -8.615850e-47 |
| Msa0984000 | Msa1313050 | 0.850250 | 1.917123e-60 | -8.615850e-47 |
| Msa0986350 | Msa1313050 | 0.801185 | 1.014616e-48 | -8.615850e-47 |
| Msa1041080 | Msa1313050 | 0.816235 | 6.139050e-52 | -8.615850e-47 |
| Msa1046610 | Msa1313050 | 0.812269 | 4.614800e-51 | -8.615850e-47 |
| Msa1054410 | Msa1313050 | 0.819773 | 9.739235e-53 | -8.615850e-47 |
| Msa0240450 | Msa1313050 | -0.802141 | 6.459562e-49 | -8.615850e-47 |
| Msa0240780 | Msa1313050 | 0.824675 | 7.098945e-54 | -8.615850e-47 |
| Msa0245870 | Msa1313050 | 0.826298 | 2.929709e-54 | -8.615850e-47 |
| Msa0258670 | Msa1313050 | -0.813433 | 2.566234e-51 | -8.615850e-47 |
| Msa0260470 | Msa1313050 | 0.835519 | 1.600982e-56 | -8.615850e-47 |
| Msa0265580 | Msa1313050 | 0.804714 | 1.892281e-49 | -8.615850e-47 |
| Msa0278670 | Msa1313050 | 0.824690 | 7.041210e-54 | -8.615850e-47 |
| Msa0304110 | Msa1313050 | 0.832539 | 8.924313e-56 | -8.615850e-47 |
| Msa0318070 | Msa1313050 | 0.824772 | 6.735214e-54 | -8.615850e-47 |
| Msa0318270 | Msa1313050 | 0.812039 | 5.181640e-51 | -8.615850e-47 |
| Msa0318310 | Msa1313050 | 0.811608 | 6.430333e-51 | -8.615850e-47 |
| Msa0341190 | Msa1313050 | 0.838489 | 2.790704e-57 | -8.615850e-47 |
| Msa0342340 | Msa1313050 | -0.846563 | 2.008052e-59 | -8.615850e-47 |
| Msa0358290 | Msa1313050 | 0.830930 | 2.225760e-55 | -8.615850e-47 |
| Msa1111630 | Msa1313050 | 0.812437 | 4.242427e-51 | -8.615850e-47 |
| Msa1137940 | Msa1313050 | 0.871614 | 5.975745e-67 | -8.615850e-47 |
| Msa1141250 | Msa1313050 | -0.804224 | 2.394000e-49 | -8.615850e-47 |
| Msa1167170 | Msa1313050 | 0.800729 | 1.257343e-48 | -8.615850e-47 |
| Msa1180050 | Msa1313050 | 0.929612 | 5.414311e-93 | -8.615850e-47 |
| Msa1182830 | Msa1313050 | 0.811729 | 6.053096e-51 | -8.615850e-47 |
| Msa1187520 | Msa1313050 | 0.804371 | 2.231174e-49 | -8.615850e-47 |
| Msa1198720 | Msa1313050 | 0.838836 | 2.269383e-57 | -8.615850e-47 |
| Msa1204980 | Msa1313050 | -0.841608 | 4.285617e-58 | -8.615850e-47 |
| Msa1205010 | Msa1313050 | -0.840339 | 9.231128e-58 | -8.615850e-47 |
| Msa1212760 | Msa1313050 | 0.811852 | 5.689500e-51 | -8.615850e-47 |
| Msa0518090 | Msa1313050 | -0.817762 | 2.787659e-52 | -8.615850e-47 |
| Msa0530950 | Msa1313050 | 0.814766 | 1.303234e-51 | -8.615850e-47 |
| Msa0540070 | Msa1313050 | 0.836570 | 8.659072e-57 | -8.615850e-47 |
| Msa0543900 | Msa1313050 | 0.817495 | 3.201396e-52 | -8.615850e-47 |
| Msa0564510 | Msa1313050 | 0.825042 | 5.816998e-54 | -8.615850e-47 |
| Msa0575850 | Msa1313050 | 0.851399 | 9.101980e-61 | -8.615850e-47 |
| Msa0576240 | Msa1313050 | 0.830127 | 3.498197e-55 | -8.615850e-47 |
| Msa0583740 | Msa1313050 | 0.800050 | 1.728438e-48 | -8.615850e-47 |
| Msa0593810 | Msa1313050 | 0.821490 | 3.928262e-53 | -8.615850e-47 |
| Msa0599770 | Msa1313050 | 0.810561 | 1.084416e-50 | -8.615850e-47 |
| Msa0600820 | Msa1313050 | 0.811332 | 7.383457e-51 | -8.615850e-47 |
| Msa0847200 | Msa1313050 | 0.824852 | 6.447547e-54 | -8.615850e-47 |
| Msa0860920 | Msa1313050 | 0.856552 | 2.978184e-62 | -8.615850e-47 |
| Msa0864690 | Msa1313050 | 0.814811 | 1.273912e-51 | -8.615850e-47 |
| Msa0929750 | Msa1313050 | 0.813804 | 2.125885e-51 | -8.615850e-47 |
| Msa0938420 | Msa1313050 | 0.843055 | 1.772554e-58 | -8.615850e-47 |
| Msa0944550 | Msa1313050 | 0.811001 | 8.709132e-51 | -8.615850e-47 |
| Msa0964430 | Msa1313050 | 0.806257 | 8.981704e-50 | -8.615850e-47 |
| Msa0964680 | Msa1313050 | 0.803464 | 3.442347e-49 | -8.615850e-47 |
| Msa0968780 | Msa1313050 | 0.811794 | 5.857144e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1313050 | MtrunA17_Chr8g0341471 | 94.855 | 447 | 23 | 0 | 1 | 447 | 1 | 447 | 0.0 | 860 |
| Msa1313050 | MtrunA17_Chr2g0330661 | 72.093 | 430 | 113 | 5 | 22 | 447 | 21 | 447 | 0.0 | 624 |
| Msa1313050 | MtrunA17_Chr2g0328461 | 71.739 | 414 | 114 | 3 | 34 | 447 | 41 | 451 | 0.0 | 618 |
| Msa1313050 | MtrunA17_Chr2g0330671 | 68.233 | 447 | 133 | 5 | 7 | 447 | 8 | 451 | 0.0 | 616 |
| Msa1313050 | MtrunA17_Chr2g0330721 | 71.256 | 414 | 116 | 3 | 34 | 447 | 42 | 452 | 0.0 | 613 |
| Msa1313050 | MtrunA17_Chr3g0124881 | 56.234 | 393 | 170 | 2 | 39 | 431 | 85 | 475 | 4.92e-162 | 466 |
| Msa1313050 | MtrunA17_Chr8g0364301 | 56.608 | 401 | 169 | 4 | 28 | 427 | 28 | 424 | 1.48e-155 | 447 |
| Msa1313050 | MtrunA17_Chr8g0371561 | 55.583 | 403 | 172 | 5 | 24 | 424 | 31 | 428 | 2.40e-152 | 439 |
| Msa1313050 | MtrunA17_Chr3g0128101 | 48.921 | 417 | 209 | 3 | 15 | 431 | 6 | 418 | 1.02e-143 | 417 |
| Msa1313050 | MtrunA17_Chr2g0328481 | 59.517 | 331 | 86 | 4 | 162 | 447 | 4 | 331 | 1.31e-128 | 375 |
| Msa1313050 | MtrunA17_Chr2g0328471 | 68.750 | 176 | 52 | 3 | 7 | 180 | 4 | 178 | 1.28e-80 | 247 |
| Msa1313050 | MtrunA17_Chr2g0330711 | 73.418 | 158 | 40 | 2 | 7 | 162 | 4 | 161 | 5.95e-77 | 237 |
| Msa1313050 | MtrunA17_Chr8g0364461 | 43.396 | 318 | 146 | 10 | 119 | 433 | 96 | 382 | 5.21e-71 | 230 |
| Msa1313050 | MtrunA17_Chr1g0158601 | 73.214 | 56 | 15 | 0 | 210 | 265 | 4 | 59 | 8.15e-21 | 85.5 |
| Msa1313050 | MtrunA17_Chr3g0128121 | 62.500 | 40 | 15 | 0 | 134 | 173 | 1 | 40 | 2.50e-12 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1313050 | AT1G51760.1 | 66.368 | 446 | 142 | 5 | 3 | 447 | 2 | 440 | 0.0 | 602 |
| Msa1313050 | AT1G51780.1 | 64.593 | 418 | 145 | 3 | 13 | 429 | 9 | 424 | 0.0 | 556 |
| Msa1313050 | AT5G56660.1 | 61.650 | 412 | 150 | 4 | 36 | 447 | 36 | 439 | 0.0 | 520 |
| Msa1313050 | AT5G56650.1 | 61.985 | 413 | 145 | 7 | 37 | 447 | 36 | 438 | 0.0 | 514 |
| Msa1313050 | AT5G56650.2 | 69.818 | 275 | 81 | 1 | 37 | 311 | 36 | 308 | 4.50e-141 | 406 |
| Msa1313050 | AT3G02875.1 | 50.246 | 406 | 198 | 3 | 27 | 431 | 28 | 430 | 4.22e-136 | 399 |
| Msa1313050 | AT1G44350.1 | 52.051 | 390 | 180 | 3 | 39 | 428 | 77 | 459 | 6.69e-136 | 399 |
| Msa1313050 | AT5G54140.1 | 47.826 | 391 | 201 | 3 | 49 | 438 | 39 | 427 | 5.17e-130 | 382 |
| Msa1313050 | AT3G02875.2 | 53.521 | 284 | 132 | 0 | 27 | 310 | 28 | 311 | 1.49e-105 | 317 |
| Msa1313050 | AT3G02875.3 | 53.226 | 248 | 116 | 0 | 27 | 274 | 28 | 275 | 1.48e-90 | 277 |
Find 100 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGTGTCATGACACCATTTA+TGG | 0.164724 | 8_4:+10634231 | Msa1313050:CDS |
| CGCACCGGAAGCTGCTAATA+TGG | 0.208424 | 8_4:-10632875 | None:intergenic |
| TTTACAGTTGGAGGATAAAA+AGG | 0.228613 | 8_4:-10634142 | None:intergenic |
| GAAAATGTCACTGCTATCTT+TGG | 0.241802 | 8_4:+10632715 | Msa1313050:CDS |
| AATTCCTCATAACCCAATTC+TGG | 0.257328 | 8_4:-10629984 | None:intergenic |
| TGTTGCTTTAAGAGCTGATA+TGG | 0.312924 | 8_4:+10630118 | Msa1313050:CDS |
| AATGAAGATGGTCTCCCTTA+TGG | 0.314381 | 8_4:+10634373 | Msa1313050:CDS |
| GAAGAAGACATGGTTTGTTT+TGG | 0.321385 | 8_4:-10629789 | None:intergenic |
| ACTGGTGTCATTGGCTTCAT+TGG | 0.332227 | 8_4:+10630077 | Msa1313050:CDS |
| TGAATTGATAAGAGCAGAAT+TGG | 0.334675 | 8_4:+10630016 | Msa1313050:CDS |
| AAGCCACTTCCTGCCAATAT+TGG | 0.337443 | 8_4:-10632790 | None:intergenic |
| GATTCATGAGAATCCAGAAT+TGG | 0.342684 | 8_4:+10629971 | Msa1313050:CDS |
| GTTGCAGTCACTGGTGTCAT+TGG | 0.356001 | 8_4:+10630068 | Msa1313050:CDS |
| TCATTTATGCAGGTTATCAT+TGG | 0.356258 | 8_4:+10634064 | Msa1313050:intron |
| AAGTCTTCAGATCCCATAAA+TGG | 0.356384 | 8_4:-10634244 | None:intergenic |
| TAATGCATTCAATGTTATTC+CGG | 0.359601 | 8_4:+10633601 | Msa1313050:CDS |
| ACTGCAACTGGATGTTTATA+AGG | 0.366834 | 8_4:-10630053 | None:intergenic |
| GTCATTGGCTTCATTGGAAC+AGG | 0.368975 | 8_4:+10630083 | Msa1313050:CDS |
| ATTGGATGATCAATATTAGA+AGG | 0.380397 | 8_4:+10629946 | Msa1313050:CDS |
| CTCTAGGTCTGGTCCAATAT+TGG | 0.382393 | 8_4:+10632777 | Msa1313050:CDS |
| GCAACTGTGGACTTCCTTCA+TGG | 0.390813 | 8_4:+10634112 | Msa1313050:CDS |
| GATGACAAAATTTGTGTTGC+AGG | 0.392661 | 8_4:-10629861 | None:intergenic |
| CATTGAATGCATTACCTCCT+TGG | 0.394140 | 8_4:-10633592 | None:intergenic |
| GTTAAAGCTTTCTTTAGAAA+AGG | 0.408192 | 8_4:-10633654 | None:intergenic |
| ATGACACCAGTGACTGCAAC+TGG | 0.422420 | 8_4:-10630065 | None:intergenic |
| CCCCTCCTTCCTCTGCTGGT+TGG | 0.427309 | 8_4:-10632657 | None:intergenic |
| GGTGAAGTGGCCTCTAGGTC+TGG | 0.429572 | 8_4:+10632766 | Msa1313050:CDS |
| CCTGGATACTTCTTCATGCT+TGG | 0.432844 | 8_4:+10634289 | Msa1313050:CDS |
| GACCCCATATTAGCAGCTTC+CGG | 0.436531 | 8_4:+10632871 | Msa1313050:CDS |
| GCACCGGAAGCTGCTAATAT+GGG | 0.436843 | 8_4:-10632874 | None:intergenic |
| CTAGAGGCCACTTCACCAAT+TGG | 0.441010 | 8_4:-10632760 | None:intergenic |
| TAAGATGAAGATTAGGTGGC+TGG | 0.452500 | 8_4:-10629682 | None:intergenic |
| CCACCAATTGTGACATGATC+CGG | 0.453558 | 8_4:-10633620 | None:intergenic |
| ATTCCGGATCATGTCACAAT+TGG | 0.455454 | 8_4:+10633617 | Msa1313050:CDS |
| AGTGTCATGACACCATTTAT+GGG | 0.458073 | 8_4:+10634232 | Msa1313050:CDS |
| ATTGCTCCTGACTTACCAAT+TGG | 0.462008 | 8_4:+10632745 | Msa1313050:CDS |
| TATGGATGCTCTTTCTATGC+AGG | 0.463188 | 8_4:+10630136 | Msa1313050:CDS |
| GCATGAAGTGCAGCTCCATA+AGG | 0.472341 | 8_4:-10634388 | None:intergenic |
| ACTTCACCAATTGGTAAGTC+AGG | 0.474836 | 8_4:-10632751 | None:intergenic |
| TTCTATCAAGAGGTCATACC+TGG | 0.480618 | 8_4:+10634271 | Msa1313050:CDS |
| TCACCATTGTTTACAGTTGG+AGG | 0.482103 | 8_4:-10634151 | None:intergenic |
| ATGGTAACATATGAATTTGA+AGG | 0.483343 | 8_4:-10629811 | None:intergenic |
| AACTTAGGAAATGGTGGAGT+GGG | 0.484788 | 8_4:+10631425 | Msa1313050:intron |
| ATTCATGAGAATCCAGAATT+GGG | 0.487924 | 8_4:+10629972 | Msa1313050:CDS |
| TTCTTTAGAAAAGGCTCGGA+AGG | 0.489629 | 8_4:-10633645 | None:intergenic |
| TCTTCATTGATTTCGAGATA+AGG | 0.495633 | 8_4:-10634358 | None:intergenic |
| GAATCCAGAATTGGGTTATG+AGG | 0.496062 | 8_4:+10629980 | Msa1313050:CDS |
| CCACACGCATGCATCTTTCC+AGG | 0.506178 | 8_4:-10631465 | None:intergenic |
| GGCTGATCCTTTAGACTCCC+AGG | 0.507269 | 8_4:+10632930 | Msa1313050:CDS |
| CAATTGGTGAAGTGGCCTCT+AGG | 0.510116 | 8_4:+10632761 | Msa1313050:CDS |
| TCAGCTCTTAAAGCAACAAA+AGG | 0.511836 | 8_4:-10630113 | None:intergenic |
| CCGGATCATGTCACAATTGG+TGG | 0.516445 | 8_4:+10633620 | Msa1313050:CDS |
| CTCTAGAAAATTGCTGAATG+AGG | 0.517438 | 8_4:-10629898 | None:intergenic |
| GCTCATGTTACCATGCTACT+TGG | 0.517522 | 8_4:+10631495 | Msa1313050:CDS |
| AAACATCCAGTTGCAGTCAC+TGG | 0.520491 | 8_4:+10630059 | Msa1313050:CDS |
| ATCTACGGCTAAGGCAACAT+TGG | 0.523265 | 8_4:-10634513 | None:intergenic |
| TTATCTTCTAAAACATCAGC+AGG | 0.527329 | 8_4:+10634426 | Msa1313050:CDS |
| CATGAAGTGCAGCTCCATAA+GGG | 0.529498 | 8_4:-10634387 | None:intergenic |
| TATCTCGAAATCAATGAAGA+TGG | 0.530795 | 8_4:+10634361 | Msa1313050:CDS |
| CCTCAATCCGCTGTCTCAGT+TGG | 0.531634 | 8_4:-10633676 | None:intergenic |
| TCCAACCAGCAGAGGAAGGA+GGG | 0.531750 | 8_4:+10632656 | Msa1313050:CDS |
| AGGTCTGGTCCAATATTGGC+AGG | 0.534596 | 8_4:+10632781 | Msa1313050:CDS |
| GGTCCAATATTGGCAGGAAG+TGG | 0.538609 | 8_4:+10632787 | Msa1313050:CDS |
| CATCAGCAGGATATTGTACC+TGG | 0.540608 | 8_4:+10634439 | Msa1313050:CDS |
| CCAAGCATGAAGAAGTATCC+AGG | 0.546741 | 8_4:-10634289 | None:intergenic |
| TAATTTACCTGGGAGTCTAA+AGG | 0.547042 | 8_4:-10632937 | None:intergenic |
| GTTTAAAACTTAGGAAATGG+TGG | 0.554059 | 8_4:+10631419 | Msa1313050:intron |
| AGCTTTCTTTAGAAAAGGCT+CGG | 0.555043 | 8_4:-10633649 | None:intergenic |
| TGTGAAGAATTATGAGATGA+AGG | 0.560370 | 8_4:-10629759 | None:intergenic |
| CCAACTGAGACAGCGGATTG+AGG | 0.561040 | 8_4:+10633676 | Msa1313050:CDS |
| TGACTTACCAATTGGTGAAG+TGG | 0.570836 | 8_4:+10632753 | Msa1313050:CDS |
| CATTCACAAAATGTTCATGC+AGG | 0.577020 | 8_4:-10634174 | None:intergenic |
| CAACCAGCAGAGGAAGGAGG+GGG | 0.578635 | 8_4:+10632658 | Msa1313050:CDS |
| AGGTCACCATTGTTTACAGT+TGG | 0.583641 | 8_4:-10634154 | None:intergenic |
| GCTCTTAAAGCAACAAAAGG+AGG | 0.585596 | 8_4:-10630110 | None:intergenic |
| GCAACACCTTGTTTCTCGCG+AGG | 0.588370 | 8_4:+10632909 | Msa1313050:CDS |
| ATGACAAAATTTGTGTTGCA+GGG | 0.590763 | 8_4:-10629860 | None:intergenic |
| CCAACCAGCAGAGGAAGGAG+GGG | 0.591236 | 8_4:+10632657 | Msa1313050:CDS |
| TATCCTCCAACTGTAAACAA+TGG | 0.592228 | 8_4:+10634148 | Msa1313050:CDS |
| GATCAGCCTCGCGAGAAACA+AGG | 0.594248 | 8_4:-10632915 | None:intergenic |
| AGACTTCTCATTCTATCAAG+AGG | 0.600460 | 8_4:+10634261 | Msa1313050:CDS |
| TTCCAACCAGCAGAGGAAGG+AGG | 0.601581 | 8_4:+10632655 | Msa1313050:CDS |
| AATGTTGCGGTGAATATGCT+TGG | 0.603714 | 8_4:+10634193 | Msa1313050:CDS |
| GAATTTGAAGGAAGAAGACA+TGG | 0.604764 | 8_4:-10629799 | None:intergenic |
| TTGCAAGCTAATAATCGCAC+CGG | 0.606405 | 8_4:-10632890 | None:intergenic |
| CTTTGCAGCACCAAGTAGCA+TGG | 0.607237 | 8_4:-10631505 | None:intergenic |
| GTGACGATTGCAAAGATCCA+AGG | 0.614161 | 8_4:+10633575 | Msa1313050:CDS |
| GCTTTAACCAACTGAGACAG+CGG | 0.615430 | 8_4:+10633669 | Msa1313050:CDS |
| AAACTTAGGAAATGGTGGAG+TGG | 0.617389 | 8_4:+10631424 | Msa1313050:intron |
| TTGGACAAGCTGCTGTGCAT+AGG | 0.618002 | 8_4:+10634083 | Msa1313050:CDS |
| GAGCACAAGAGTAAAGTACC+TGG | 0.618593 | 8_4:+10631447 | Msa1313050:CDS |
| CACCGGAAGCTGCTAATATG+GGG | 0.622033 | 8_4:-10632873 | None:intergenic |
| ATGGGGTCTATAGATTGTTG+AGG | 0.630727 | 8_4:-10632856 | None:intergenic |
| GCATAGGTGCAATGCAACTG+TGG | 0.658051 | 8_4:+10634099 | Msa1313050:CDS |
| CAATATTGGACCAGACCTAG+AGG | 0.660996 | 8_4:-10632776 | None:intergenic |
| AGAGAGTGCCAAAAGTCCTG+AGG | 0.663163 | 8_4:+10629917 | Msa1313050:CDS |
| TGGTTGGAAAACAAGAACAA+TGG | 0.673758 | 8_4:-10632641 | None:intergenic |
| ACTGAGACAGCGGATTGAGG+AGG | 0.686390 | 8_4:+10633679 | Msa1313050:CDS |
| CCTGGAAAGATGCATGCGTG+TGG | 0.730006 | 8_4:+10631465 | Msa1313050:CDS |
| ACGATTGCAAAGATCCAAGG+AGG | 0.737015 | 8_4:+10633578 | Msa1313050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAATATAATGATAAAAAAA+TGG | - | chr8_4:10629833-10629852 | None:intergenic | 10.0% |
| !!! | TTTTTTTTAAGATGAAGATT+AGG | - | chr8_4:10629692-10629711 | None:intergenic | 15.0% |
| !! | TATTATGATCTATTATGATT+TGG | - | chr8_4:10630423-10630442 | None:intergenic | 15.0% |
| !!! | ACTATTATGTAAAGTATTAT+CGG | - | chr8_4:10630609-10630628 | None:intergenic | 15.0% |
| !! | TTTATTAGAAGAAAAAAATG+TGG | - | chr8_4:10630876-10630895 | None:intergenic | 15.0% |
| !! | AAAAGATCATATATACTATA+GGG | - | chr8_4:10631263-10631282 | None:intergenic | 15.0% |
| !! | TAAAAGATCATATATACTAT+AGG | - | chr8_4:10631264-10631283 | None:intergenic | 15.0% |
| !!! | TGACTTTTTATTTTGTTTTA+TGG | + | chr8_4:10631291-10631310 | Msa1313050:intron | 15.0% |
| !!! | GACTTTTTATTTTGTTTTAT+GGG | + | chr8_4:10631292-10631311 | Msa1313050:intron | 15.0% |
| !!! | TCTAATATCATATTTCTATA+TGG | + | chr8_4:10631320-10631339 | Msa1313050:intron | 15.0% |
| !!! | AAACTCTAATTTTTTATCTA+CGG | - | chr8_4:10634531-10634550 | None:intergenic | 15.0% |
| !! | AATTTCAGTTAAAAAAGTGA+TGG | - | chr8_4:10630485-10630504 | None:intergenic | 20.0% |
| !! | AAATGTTGGATATATAAAAG+AGG | - | chr8_4:10631187-10631206 | None:intergenic | 20.0% |
| !! | TTATGAATTGGTAAAAATGT+TGG | - | chr8_4:10631201-10631220 | None:intergenic | 20.0% |
| !!! | GTATATATGATCTTTTATGA+TGG | + | chr8_4:10631267-10631286 | Msa1313050:intron | 20.0% |
| !! | TGATATGAATTAAAAATGTG+TGG | + | chr8_4:10631791-10631810 | Msa1313050:intron | 20.0% |
| !!! | ATGCAAGTTTTGTAAATTAT+AGG | + | chr8_4:10631977-10631996 | Msa1313050:intron | 20.0% |
| !!! | TCTTTTAGTTAGTATCAAAA+TGG | - | chr8_4:10632309-10632328 | None:intergenic | 20.0% |
| !!! | TTTTGATACTAACTAAAAGA+AGG | + | chr8_4:10632309-10632328 | Msa1313050:intron | 20.0% |
| !! | TTTGATACTAACTAAAAGAA+GGG | + | chr8_4:10632310-10632329 | Msa1313050:intron | 20.0% |
| !!! | TTCTTTGAAGCAAAAATAAA+TGG | + | chr8_4:10632811-10632830 | Msa1313050:CDS | 20.0% |
| !! | AATGTAAGAATAATTTACCT+GGG | - | chr8_4:10632950-10632969 | None:intergenic | 20.0% |
| !! | AAATGTAAGAATAATTTACC+TGG | - | chr8_4:10632951-10632970 | None:intergenic | 20.0% |
| !! | TATGAAATAAGTGTAATAAG+TGG | - | chr8_4:10632988-10633007 | None:intergenic | 20.0% |
| !! | ATTACACTTATTTCATACTT+AGG | + | chr8_4:10632991-10633010 | Msa1313050:intron | 20.0% |
| !! | TTGTAATTAAAAGTGAAAAC+AGG | - | chr8_4:10633993-10634012 | None:intergenic | 20.0% |
| !!! | TTTTTAAGATGAAGATTAGG+TGG | - | chr8_4:10629689-10629708 | None:intergenic | 25.0% |
| ! | ATGGTAACATATGAATTTGA+AGG | - | chr8_4:10629814-10629833 | None:intergenic | 25.0% |
| ! | ATTGGATGATCAATATTAGA+AGG | + | chr8_4:10629946-10629965 | Msa1313050:CDS | 25.0% |
| ! | TTGAAGAGAGTAATAGTTTA+AGG | - | chr8_4:10630176-10630195 | None:intergenic | 25.0% |
| !! | TTATGTAAAGTATTATCGGA+GGG | - | chr8_4:10630605-10630624 | None:intergenic | 25.0% |
| !! | ATTATGTAAAGTATTATCGG+AGG | - | chr8_4:10630606-10630625 | None:intergenic | 25.0% |
| ! | GAAGAAAAAAATGTGGAAAA+GGG | - | chr8_4:10630869-10630888 | None:intergenic | 25.0% |
| ! | AGAAGAAAAAAATGTGGAAA+AGG | - | chr8_4:10630870-10630889 | None:intergenic | 25.0% |
| ! | TTCTACGTAATGTTAATGTT+AGG | + | chr8_4:10630937-10630956 | Msa1313050:intron | 25.0% |
| ! | TCTACGTAATGTTAATGTTA+GGG | + | chr8_4:10630938-10630957 | Msa1313050:intron | 25.0% |
| ! | TATGGAGTTAAGATAAACAA+AGG | + | chr8_4:10631338-10631357 | Msa1313050:intron | 25.0% |
| ! | ATGGAGTTAAGATAAACAAA+GGG | + | chr8_4:10631339-10631358 | Msa1313050:intron | 25.0% |
| !! | TCATCTCATGTTTAAAACTT+AGG | + | chr8_4:10631410-10631429 | Msa1313050:intron | 25.0% |
| !! | CATGTTTAAAACTTAGGAAA+TGG | + | chr8_4:10631416-10631435 | Msa1313050:intron | 25.0% |
| !!! | TGTCTTAGCTTCTTATTTTT+CGG | + | chr8_4:10631573-10631592 | Msa1313050:intron | 25.0% |
| ! | TTATATTCTGCTTAAACAAG+TGG | + | chr8_4:10631620-10631639 | Msa1313050:intron | 25.0% |
| ! | TTAGTTAAAGTTGAATCGAT+CGG | + | chr8_4:10631666-10631685 | Msa1313050:intron | 25.0% |
| ! | TTAATTCATATCAGAATCTC+AGG | - | chr8_4:10631784-10631803 | None:intergenic | 25.0% |
| !! | AAAAGTATGAAATCATCACA+AGG | - | chr8_4:10631862-10631881 | None:intergenic | 25.0% |
| !! | ATGTTTCACTTTGACATTTT+TGG | - | chr8_4:10631901-10631920 | None:intergenic | 25.0% |
| ! | AAGTGAAACATATATCTCTT+TGG | + | chr8_4:10631910-10631929 | Msa1313050:intron | 25.0% |
| ! | TGTATCATATTACCAAATTG+TGG | + | chr8_4:10631935-10631954 | Msa1313050:intron | 25.0% |
| ! | GTATCATATTACCAAATTGT+GGG | + | chr8_4:10631936-10631955 | Msa1313050:intron | 25.0% |
| ! | TATCATATTACCAAATTGTG+GGG | + | chr8_4:10631937-10631956 | Msa1313050:intron | 25.0% |
| ! | TAATTTACAAAACTTGCATC+AGG | - | chr8_4:10631976-10631995 | None:intergenic | 25.0% |
| ! | TCATCTATCATATATCTCTT+TGG | + | chr8_4:10632007-10632026 | Msa1313050:intron | 25.0% |
| ! | AGAAGTTAAGATCATCAAAA+GGG | - | chr8_4:10632157-10632176 | None:intergenic | 25.0% |
| ! | AAGAAGTTAAGATCATCAAA+AGG | - | chr8_4:10632158-10632177 | None:intergenic | 25.0% |
| ! | ATTACAATACTTCTATCATC+TGG | + | chr8_4:10632212-10632231 | Msa1313050:intron | 25.0% |
| ! | GAGAGAAAAACATTACAAAA+TGG | - | chr8_4:10632258-10632277 | None:intergenic | 25.0% |
| !!! | TCTTTATTTTGTTGTCTGAA+AGG | + | chr8_4:10632615-10632634 | Msa1313050:intron | 25.0% |
| !!! | CTTTATTTTGTTGTCTGAAA+GGG | + | chr8_4:10632616-10632635 | Msa1313050:intron | 25.0% |
| !! | CTAAGAAAATTTTAGATGCT+GGG | + | chr8_4:10632686-10632705 | Msa1313050:CDS | 25.0% |
| !! | TAAGAAAATTTTAGATGCTG+GGG | + | chr8_4:10632687-10632706 | Msa1313050:CDS | 25.0% |
| ! | TGAAGCAAAAATAAATGGAA+AGG | + | chr8_4:10632816-10632835 | Msa1313050:CDS | 25.0% |
| ! | GAAGCAAAAATAAATGGAAA+GGG | + | chr8_4:10632817-10632836 | Msa1313050:CDS | 25.0% |
| ! | TAATAAGTGGATAATAGGAA+GGG | - | chr8_4:10632975-10632994 | None:intergenic | 25.0% |
| ! | AAGTGTAATAAGTGGATAAT+AGG | - | chr8_4:10632980-10632999 | None:intergenic | 25.0% |
| ! | CAAGTAAATAAGATACTGTT+TGG | - | chr8_4:10633222-10633241 | None:intergenic | 25.0% |
| ! | TTTCAAACAATGATGATTCT+TGG | - | chr8_4:10633475-10633494 | None:intergenic | 25.0% |
| ! | TAATGCATTCAATGTTATTC+CGG | + | chr8_4:10633601-10633620 | Msa1313050:CDS | 25.0% |
| !! | GTTAAAGCTTTCTTTAGAAA+AGG | - | chr8_4:10633657-10633676 | None:intergenic | 25.0% |
| !! | TGTTTGTGTCTTAACTATTT+TGG | + | chr8_4:10633896-10633915 | Msa1313050:intron | 25.0% |
| !!! | TAATTTTTTATCTACGGCTA+AGG | - | chr8_4:10634525-10634544 | None:intergenic | 25.0% |
| TGTGAAGAATTATGAGATGA+AGG | - | chr8_4:10629762-10629781 | None:intergenic | 30.0% | |
| ATGACAAAATTTGTGTTGCA+GGG | - | chr8_4:10629863-10629882 | None:intergenic | 30.0% | |
| ATTCATGAGAATCCAGAATT+GGG | + | chr8_4:10629972-10629991 | Msa1313050:CDS | 30.0% | |
| TGAATTGATAAGAGCAGAAT+TGG | + | chr8_4:10630016-10630035 | Msa1313050:CDS | 30.0% | |
| ! | TGAAAATCCGTCAATTTTGT+CGG | + | chr8_4:10630244-10630263 | Msa1313050:intron | 30.0% |
| CTTGAGAAGAGATTATAAAG+AGG | + | chr8_4:10630319-10630338 | Msa1313050:intron | 30.0% | |
| AAAAATGTGGAAAAGGGATA+AGG | - | chr8_4:10630863-10630882 | None:intergenic | 30.0% | |
| CTACGTAATGTTAATGTTAG+GGG | + | chr8_4:10630939-10630958 | Msa1313050:intron | 30.0% | |
| !!! | AGATGTTTTGGTGATTTGTA+TGG | - | chr8_4:10630997-10631016 | None:intergenic | 30.0% |
| ! | ATCAGAGTGATAAGATGTTT+TGG | - | chr8_4:10631009-10631028 | None:intergenic | 30.0% |
| TCATATATACTATAGGGTGT+TGG | - | chr8_4:10631257-10631276 | None:intergenic | 30.0% | |
| ! | GTTTAAAACTTAGGAAATGG+TGG | + | chr8_4:10631419-10631438 | Msa1313050:intron | 30.0% |
| TAGTTAAAGTTGAATCGATC+GGG | + | chr8_4:10631667-10631686 | Msa1313050:intron | 30.0% | |
| TTGTAGAGTTAATGACACTT+TGG | - | chr8_4:10631832-10631851 | None:intergenic | 30.0% | |
| GATATAATTTCCCCACAATT+TGG | - | chr8_4:10631950-10631969 | None:intergenic | 30.0% | |
| !! | CATTGGAAAAGAAGTATCTA+AGG | - | chr8_4:10632077-10632096 | None:intergenic | 30.0% |
| ! | CTTTGATTCAAGTTTGACAT+TGG | - | chr8_4:10632094-10632113 | None:intergenic | 30.0% |
| ! | TCAAAATCTTGCTTAGTTCT+TGG | + | chr8_4:10632276-10632295 | Msa1313050:intron | 30.0% |
| TTAATACTGACATGTAGACA+CGG | - | chr8_4:10632506-10632525 | None:intergenic | 30.0% | |
| ACATGTCAGTATTAATATCG+TGG | + | chr8_4:10632511-10632530 | Msa1313050:intron | 30.0% | |
| ! | TACTTTTCTCAGTATTGTCT+TGG | + | chr8_4:10632562-10632581 | Msa1313050:intron | 30.0% |
| ! | GCTAAGAAAATTTTAGATGC+TGG | + | chr8_4:10632685-10632704 | Msa1313050:CDS | 30.0% |
| GTAATAAGTGGATAATAGGA+AGG | - | chr8_4:10632976-10632995 | None:intergenic | 30.0% | |
| ! | TTTCATACTTAGGCTCTTTT+TGG | + | chr8_4:10633001-10633020 | Msa1313050:intron | 30.0% |
| GTAAATAAGATACTGTTTGG+AGG | - | chr8_4:10633219-10633238 | None:intergenic | 30.0% | |
| AGATTATTAAGAGCCTAAGT+AGG | + | chr8_4:10633358-10633377 | Msa1313050:intron | 30.0% | |
| TGCATAAAATGGAAAACTGT+TGG | + | chr8_4:10633415-10633434 | Msa1313050:intron | 30.0% | |
| ATTATGTAAGCAAGACAAGA+GGG | - | chr8_4:10633538-10633557 | None:intergenic | 30.0% | |
| AATTATGTAAGCAAGACAAG+AGG | - | chr8_4:10633539-10633558 | None:intergenic | 30.0% | |
| CAGGTTTAACAATCAAAGTA+AGG | - | chr8_4:10633815-10633834 | None:intergenic | 30.0% | |
| TTAAGTCGTTTATCCAAACA+AGG | + | chr8_4:10634029-10634048 | Msa1313050:intron | 30.0% | |
| TCATTTATGCAGGTTATCAT+TGG | + | chr8_4:10634064-10634083 | Msa1313050:intron | 30.0% | |
| TTTACAGTTGGAGGATAAAA+AGG | - | chr8_4:10634145-10634164 | None:intergenic | 30.0% | |
| ! | TGAACATTTTGTGAATGTTG+CGG | + | chr8_4:10634180-10634199 | Msa1313050:CDS | 30.0% |
| !! | TCTTCATTGATTTCGAGATA+AGG | - | chr8_4:10634361-10634380 | None:intergenic | 30.0% |
| TATCTCGAAATCAATGAAGA+TGG | + | chr8_4:10634361-10634380 | Msa1313050:CDS | 30.0% | |
| !! | TTATCTTCTAAAACATCAGC+AGG | + | chr8_4:10634426-10634445 | Msa1313050:CDS | 30.0% |
| !!! | GAAGAAGACATGGTTTGTTT+TGG | - | chr8_4:10629792-10629811 | None:intergenic | 35.0% |
| GAATTTGAAGGAAGAAGACA+TGG | - | chr8_4:10629802-10629821 | None:intergenic | 35.0% | |
| GATGACAAAATTTGTGTTGC+AGG | - | chr8_4:10629864-10629883 | None:intergenic | 35.0% | |
| ! | CTCTAGAAAATTGCTGAATG+AGG | - | chr8_4:10629901-10629920 | None:intergenic | 35.0% |
| ! | ATCAAAAACCTCAGGACTTT+TGG | - | chr8_4:10629928-10629947 | None:intergenic | 35.0% |
| ! | AAAGTCCTGAGGTTTTTGAT+TGG | + | chr8_4:10629928-10629947 | Msa1313050:CDS | 35.0% |
| ATCATCCAATCAAAAACCTC+AGG | - | chr8_4:10629936-10629955 | None:intergenic | 35.0% | |
| GATTCATGAGAATCCAGAAT+TGG | + | chr8_4:10629971-10629990 | Msa1313050:CDS | 35.0% | |
| AATTCCTCATAACCCAATTC+TGG | - | chr8_4:10629987-10630006 | None:intergenic | 35.0% | |
| ACTGCAACTGGATGTTTATA+AGG | - | chr8_4:10630056-10630075 | None:intergenic | 35.0% | |
| TCAGCTCTTAAAGCAACAAA+AGG | - | chr8_4:10630116-10630135 | None:intergenic | 35.0% | |
| !! | TGTTGCTTTAAGAGCTGATA+TGG | + | chr8_4:10630118-10630137 | Msa1313050:CDS | 35.0% |
| GAATCCTATCTATCCAATGT+GGG | - | chr8_4:10630300-10630319 | None:intergenic | 35.0% | |
| AGAATCCTATCTATCCAATG+TGG | - | chr8_4:10630301-10630320 | None:intergenic | 35.0% | |
| GAGAAGAGATTATAAAGAGG+AGG | + | chr8_4:10630322-10630341 | Msa1313050:intron | 35.0% | |
| CTAACTCATCCATACAAAAC+CGG | - | chr8_4:10630366-10630385 | None:intergenic | 35.0% | |
| ! | TTCCAGCTTCACATTTTTCA+CGG | - | chr8_4:10630529-10630548 | None:intergenic | 35.0% |
| AAGCTGGAAATTGTAGAGTT+TGG | + | chr8_4:10630540-10630559 | Msa1313050:intron | 35.0% | |
| ATTTGTATGGAGCAACATAG+AGG | - | chr8_4:10630984-10631003 | None:intergenic | 35.0% | |
| !! | TCTTGTGGTTCTAAAGCATT+TGG | - | chr8_4:10631110-10631129 | None:intergenic | 35.0% |
| ! | ACGTAATGCCTTAAGGTTTT+GGG | - | chr8_4:10631154-10631173 | None:intergenic | 35.0% |
| ! | TACGTAATGCCTTAAGGTTT+TGG | - | chr8_4:10631155-10631174 | None:intergenic | 35.0% |
| CTCATATACGTAATGCCTTA+AGG | - | chr8_4:10631161-10631180 | None:intergenic | 35.0% | |
| ATCTCACATCGCTTATGAAT+TGG | - | chr8_4:10631213-10631232 | None:intergenic | 35.0% | |
| ACAGCATGAAAAAGAGATAC+AGG | + | chr8_4:10631536-10631555 | Msa1313050:CDS | 35.0% | |
| TGTCAGTATTAATATCGTGG+CGG | + | chr8_4:10632514-10632533 | Msa1313050:intron | 35.0% | |
| ACTGACATGTTAAACAGACA+TGG | - | chr8_4:10632543-10632562 | None:intergenic | 35.0% | |
| GAATTTATCAGTAATCCACG+AGG | - | chr8_4:10632597-10632616 | None:intergenic | 35.0% | |
| TGGTTGGAAAACAAGAACAA+TGG | - | chr8_4:10632644-10632663 | None:intergenic | 35.0% | |
| GAAAATGTCACTGCTATCTT+TGG | + | chr8_4:10632715-10632734 | Msa1313050:CDS | 35.0% | |
| GCAAAAATAAATGGAAAGGG+AGG | + | chr8_4:10632820-10632839 | Msa1313050:CDS | 35.0% | |
| TAATTTACCTGGGAGTCTAA+AGG | - | chr8_4:10632940-10632959 | None:intergenic | 35.0% | |
| AAGATCTCTTGTAGAGCTTT+CGG | + | chr8_4:10633142-10633161 | Msa1313050:intron | 35.0% | |
| CTGATTGCTTAGCATAGTTA+TGG | - | chr8_4:10633279-10633298 | None:intergenic | 35.0% | |
| TTATGTAAGCAAGACAAGAG+GGG | - | chr8_4:10633537-10633556 | None:intergenic | 35.0% | |
| ! | AGCTTTCTTTAGAAAAGGCT+CGG | - | chr8_4:10633652-10633671 | None:intergenic | 35.0% |
| ! | AAGCTGATGATGCATACTAT+AGG | - | chr8_4:10633770-10633789 | None:intergenic | 35.0% |
| TACGTACAATCAAGCTAATC+AGG | - | chr8_4:10633834-10633853 | None:intergenic | 35.0% | |
| CGTAAAGTTAACTCAGAAAC+AGG | + | chr8_4:10633850-10633869 | Msa1313050:intron | 35.0% | |
| TGCATAAATGAATCAGTCCT+AGG | - | chr8_4:10634055-10634074 | None:intergenic | 35.0% | |
| ! | TAGGACTGATTCATTTATGC+AGG | + | chr8_4:10634054-10634073 | Msa1313050:intron | 35.0% |
| AAAAAGGTTTCACTCCATGA+AGG | - | chr8_4:10634129-10634148 | None:intergenic | 35.0% | |
| TATCCTCCAACTGTAAACAA+TGG | + | chr8_4:10634148-10634167 | Msa1313050:CDS | 35.0% | |
| CATTCACAAAATGTTCATGC+AGG | - | chr8_4:10634177-10634196 | None:intergenic | 35.0% | |
| TAGTGTCATGACACCATTTA+TGG | + | chr8_4:10634231-10634250 | Msa1313050:CDS | 35.0% | |
| AGTGTCATGACACCATTTAT+GGG | + | chr8_4:10634232-10634251 | Msa1313050:CDS | 35.0% | |
| AAGTCTTCAGATCCCATAAA+TGG | - | chr8_4:10634247-10634266 | None:intergenic | 35.0% | |
| AGACTTCTCATTCTATCAAG+AGG | + | chr8_4:10634261-10634280 | Msa1313050:CDS | 35.0% | |
| ! | TGATATTTTCTCTCAACACC+AGG | - | chr8_4:10634460-10634479 | None:intergenic | 35.0% |
| ! | AGTTTTCACTACATACTCTG+TGG | + | chr8_4:10634546-10634565 | Msa1313050:three_prime_UTR | 35.0% |
| TAAGATGAAGATTAGGTGGC+TGG | - | chr8_4:10629685-10629704 | None:intergenic | 40.0% | |
| !!! | GAAGACATGGTTTGTTTTGG+TGG | - | chr8_4:10629789-10629808 | None:intergenic | 40.0% |
| GAATCCAGAATTGGGTTATG+AGG | + | chr8_4:10629980-10629999 | Msa1313050:CDS | 40.0% | |
| GCTCTTAAAGCAACAAAAGG+AGG | - | chr8_4:10630113-10630132 | None:intergenic | 40.0% | |
| TATGGATGCTCTTTCTATGC+AGG | + | chr8_4:10630136-10630155 | Msa1313050:CDS | 40.0% | |
| GCTAACACCGACAAAATTGA+CGG | - | chr8_4:10630254-10630273 | None:intergenic | 40.0% | |
| !!! | GTCAATTTTGTCGGTGTTAG+CGG | + | chr8_4:10630253-10630272 | Msa1313050:intron | 40.0% |
| TAGTCCCACATTGGATAGAT+AGG | + | chr8_4:10630293-10630312 | Msa1313050:intron | 40.0% | |
| !! | CGGTTTTGTATGGATGAGTT+AGG | + | chr8_4:10630364-10630383 | Msa1313050:intron | 40.0% |
| ! | TTTTCACGGTGGAAATGCAT+TGG | - | chr8_4:10630515-10630534 | None:intergenic | 40.0% |
| TTGTAGAGTTTGGCAAAACG+TGG | + | chr8_4:10630550-10630569 | Msa1313050:intron | 40.0% | |
| ! | AGTTTGGCAAAACGTGGTTT+TGG | + | chr8_4:10630556-10630575 | Msa1313050:intron | 40.0% |
| TTGCCTTCCCCTATGTATAT+TGG | + | chr8_4:10631051-10631070 | Msa1313050:intron | 40.0% | |
| TGCCTTCCCCTATGTATATT+GGG | + | chr8_4:10631052-10631071 | Msa1313050:intron | 40.0% | |
| TGACTCCCCAATATACATAG+GGG | - | chr8_4:10631061-10631080 | None:intergenic | 40.0% | |
| CTGACTCCCCAATATACATA+GGG | - | chr8_4:10631062-10631081 | None:intergenic | 40.0% | |
| !! | ATGCTTTAGAACCACAAGAG+AGG | + | chr8_4:10631111-10631130 | Msa1313050:intron | 40.0% |
| !! | TGCTTTAGAACCACAAGAGA+GGG | + | chr8_4:10631112-10631131 | Msa1313050:intron | 40.0% |
| !!! | TAATGCCTTAAGGTTTTGGG+TGG | - | chr8_4:10631151-10631170 | None:intergenic | 40.0% |
| ! | AAACTTAGGAAATGGTGGAG+TGG | + | chr8_4:10631424-10631443 | Msa1313050:intron | 40.0% |
| ! | AACTTAGGAAATGGTGGAGT+GGG | + | chr8_4:10631425-10631444 | Msa1313050:intron | 40.0% |
| TCCATGGCTGGAATAATTCA+TGG | + | chr8_4:10631705-10631724 | Msa1313050:intron | 40.0% | |
| TAAACCCTCCCAGTTTCTAT+GGG | - | chr8_4:10631734-10631753 | None:intergenic | 40.0% | |
| CACTTTGGACAATAGAGAAG+TGG | - | chr8_4:10631817-10631836 | None:intergenic | 40.0% | |
| ! | GCACTGACACTTCAGATTAA+AGG | + | chr8_4:10632414-10632433 | Msa1313050:intron | 40.0% |
| TTTATCAGTAATCCACGAGG+AGG | - | chr8_4:10632594-10632613 | None:intergenic | 40.0% | |
| ATTGCTCCTGACTTACCAAT+TGG | + | chr8_4:10632745-10632764 | Msa1313050:CDS | 40.0% | |
| ACTTCACCAATTGGTAAGTC+AGG | - | chr8_4:10632754-10632773 | None:intergenic | 40.0% | |
| TGACTTACCAATTGGTGAAG+TGG | + | chr8_4:10632753-10632772 | Msa1313050:CDS | 40.0% | |
| ATGGGGTCTATAGATTGTTG+AGG | - | chr8_4:10632859-10632878 | None:intergenic | 40.0% | |
| TTGCAAGCTAATAATCGCAC+CGG | - | chr8_4:10632893-10632912 | None:intergenic | 40.0% | |
| GAGCTAATGTAAACAGCTCA+TGG | - | chr8_4:10633197-10633216 | None:intergenic | 40.0% | |
| CCACAAATAGGTTCCTACTT+AGG | - | chr8_4:10633374-10633393 | None:intergenic | 40.0% | |
| CCTAAGTAGGAACCTATTTG+TGG | + | chr8_4:10633371-10633390 | Msa1313050:intron | 40.0% | |
| ! | GGTGGAAGTTTTCCACAAAT+AGG | - | chr8_4:10633386-10633405 | None:intergenic | 40.0% |
| ! | TTTTATGCAGAAGAAGCAGG+TGG | - | chr8_4:10633404-10633423 | None:intergenic | 40.0% |
| ! | CCATTTTATGCAGAAGAAGC+AGG | - | chr8_4:10633407-10633426 | None:intergenic | 40.0% |
| CCTGCTTCTTCTGCATAAAA+TGG | + | chr8_4:10633404-10633423 | Msa1313050:intron | 40.0% | |
| ! | ATGAAAGACGTGCTTGTTGA+AGG | + | chr8_4:10633503-10633522 | Msa1313050:intron | 40.0% |
| CATTGAATGCATTACCTCCT+TGG | - | chr8_4:10633595-10633614 | None:intergenic | 40.0% | |
| ATTCCGGATCATGTCACAAT+TGG | + | chr8_4:10633617-10633636 | Msa1313050:CDS | 40.0% | |
| ! | TTCTTTAGAAAAGGCTCGGA+AGG | - | chr8_4:10633648-10633667 | None:intergenic | 40.0% |
| GATGATGCATACTATAGGAG+AGG | - | chr8_4:10633765-10633784 | None:intergenic | 40.0% | |
| CATAACTGAGAGTCATGCAT+AGG | + | chr8_4:10633936-10633955 | Msa1313050:intron | 40.0% | |
| TCACCATTGTTTACAGTTGG+AGG | - | chr8_4:10634154-10634173 | None:intergenic | 40.0% | |
| AGGTCACCATTGTTTACAGT+TGG | - | chr8_4:10634157-10634176 | None:intergenic | 40.0% | |
| AATGTTGCGGTGAATATGCT+TGG | + | chr8_4:10634193-10634212 | Msa1313050:CDS | 40.0% | |
| TTCTATCAAGAGGTCATACC+TGG | + | chr8_4:10634271-10634290 | Msa1313050:CDS | 40.0% | |
| AATGAAGATGGTCTCCCTTA+TGG | + | chr8_4:10634373-10634392 | Msa1313050:CDS | 40.0% | |
| AAACATCCAGTTGCAGTCAC+TGG | + | chr8_4:10630059-10630078 | Msa1313050:CDS | 45.0% | |
| !! | ACTGGTGTCATTGGCTTCAT+TGG | + | chr8_4:10630077-10630096 | Msa1313050:CDS | 45.0% |
| !! | GTCATTGGCTTCATTGGAAC+AGG | + | chr8_4:10630083-10630102 | Msa1313050:CDS | 45.0% |
| AATGTGGGACTAAATCCCCT+CGG | - | chr8_4:10630285-10630304 | None:intergenic | 45.0% | |
| !! | CCATACAAAACCGGCTTGTA+TGG | - | chr8_4:10630357-10630376 | None:intergenic | 45.0% |
| !! | CCATACAAGCCGGTTTTGTA+TGG | + | chr8_4:10630354-10630373 | Msa1313050:intron | 45.0% |
| ! | CAGCTTCACATTTTTCACGG+TGG | - | chr8_4:10630526-10630545 | None:intergenic | 45.0% |
| CACCGTGAAAAATGTGAAGC+TGG | + | chr8_4:10630524-10630543 | Msa1313050:intron | 45.0% | |
| !!! | TTGGCAAAACGTGGTTTTGG+TGG | + | chr8_4:10630559-10630578 | Msa1313050:intron | 45.0% |
| !!! | TGGCAAAACGTGGTTTTGGT+GGG | + | chr8_4:10630560-10630579 | Msa1313050:intron | 45.0% |
| GCCTTCCCCTATGTATATTG+GGG | + | chr8_4:10631053-10631072 | Msa1313050:intron | 45.0% | |
| TCCCCAATATACATAGGGGA+AGG | - | chr8_4:10631057-10631076 | None:intergenic | 45.0% | |
| CCTGACTCCCCAATATACAT+AGG | - | chr8_4:10631063-10631082 | None:intergenic | 45.0% | |
| CCTATGTATATTGGGGAGTC+AGG | + | chr8_4:10631060-10631079 | Msa1313050:intron | 45.0% | |
| ATGTATATTGGGGAGTCAGG+AGG | + | chr8_4:10631063-10631082 | Msa1313050:intron | 45.0% | |
| CATCTCCACCCAAAACCTTA+AGG | + | chr8_4:10631143-10631162 | Msa1313050:intron | 45.0% | |
| ! | GAGCACAAGAGTAAAGTACC+TGG | + | chr8_4:10631447-10631466 | Msa1313050:CDS | 45.0% |
| GCTCATGTTACCATGCTACT+TGG | + | chr8_4:10631495-10631514 | Msa1313050:CDS | 45.0% | |
| AACAAGTGGCTTGACTCAGT+TGG | + | chr8_4:10631634-10631653 | Msa1313050:intron | 45.0% | |
| !! | GAGCACTCGAGTTTTATCCA+TGG | + | chr8_4:10631689-10631708 | Msa1313050:intron | 45.0% |
| !! | ACTCGAGTTTTATCCATGGC+TGG | + | chr8_4:10631693-10631712 | Msa1313050:intron | 45.0% |
| GCCATGAATTATTCCAGCCA+TGG | - | chr8_4:10631709-10631728 | None:intergenic | 45.0% | |
| CTAAACCCTCCCAGTTTCTA+TGG | - | chr8_4:10631735-10631754 | None:intergenic | 45.0% | |
| ! | CTGAAGTGTCAGTGCTACAT+AGG | - | chr8_4:10632409-10632428 | None:intergenic | 45.0% |
| !!! | TCTTGTTTTCCAACCAGCAG+AGG | + | chr8_4:10632648-10632667 | Msa1313050:CDS | 45.0% |
| CAATATTGGACCAGACCTAG+AGG | - | chr8_4:10632779-10632798 | None:intergenic | 45.0% | |
| CTCTAGGTCTGGTCCAATAT+TGG | + | chr8_4:10632777-10632796 | Msa1313050:CDS | 45.0% | |
| AAGCCACTTCCTGCCAATAT+TGG | - | chr8_4:10632793-10632812 | None:intergenic | 45.0% | |
| TACATAATTCATGCTCCCGC+AGG | + | chr8_4:10633550-10633569 | Msa1313050:intron | 45.0% | |
| TTTGCAATCGTCACAACCTG+CGG | - | chr8_4:10633569-10633588 | None:intergenic | 45.0% | |
| GTGACGATTGCAAAGATCCA+AGG | + | chr8_4:10633575-10633594 | Msa1313050:CDS | 45.0% | |
| ACGATTGCAAAGATCCAAGG+AGG | + | chr8_4:10633578-10633597 | Msa1313050:CDS | 45.0% | |
| CCACCAATTGTGACATGATC+CGG | - | chr8_4:10633623-10633642 | None:intergenic | 45.0% | |
| GCTTTAACCAACTGAGACAG+CGG | + | chr8_4:10633669-10633688 | Msa1313050:CDS | 45.0% | |
| ! | CGGATTGAGGAGGTATGTAT+TGG | + | chr8_4:10633689-10633708 | Msa1313050:intron | 45.0% |
| ACTGAGAGTCATGCATAGGT+TGG | + | chr8_4:10633940-10633959 | Msa1313050:intron | 45.0% | |
| CGTTTATCCAAACAAGGCCT+AGG | + | chr8_4:10634035-10634054 | Msa1313050:intron | 45.0% | |
| !! | AATCAGTCCTAGGCCTTGTT+TGG | - | chr8_4:10634045-10634064 | None:intergenic | 45.0% |
| !! | CCAAGCATGAAGAAGTATCC+AGG | - | chr8_4:10634292-10634311 | None:intergenic | 45.0% |
| CCTGGATACTTCTTCATGCT+TGG | + | chr8_4:10634289-10634308 | Msa1313050:CDS | 45.0% | |
| CATGAAGTGCAGCTCCATAA+GGG | - | chr8_4:10634390-10634409 | None:intergenic | 45.0% | |
| CATCAGCAGGATATTGTACC+TGG | + | chr8_4:10634439-10634458 | Msa1313050:CDS | 45.0% | |
| ATCTACGGCTAAGGCAACAT+TGG | - | chr8_4:10634516-10634535 | None:intergenic | 45.0% | |
| !! | GAATAATAATAATATAATAA+CGG | - | chr8_4:10632369-10632388 | None:intergenic | 5.0% |
| !! | AGAGAGTGCCAAAAGTCCTG+AGG | + | chr8_4:10629917-10629936 | Msa1313050:CDS | 50.0% |
| ATGACACCAGTGACTGCAAC+TGG | - | chr8_4:10630068-10630087 | None:intergenic | 50.0% | |
| !! | GTTGCAGTCACTGGTGTCAT+TGG | + | chr8_4:10630068-10630087 | Msa1313050:CDS | 50.0% |
| GAGGGGATTTAGTCCCACAT+TGG | + | chr8_4:10630284-10630303 | Msa1313050:intron | 50.0% | |
| !! | CAAAACCGGCTTGTATGGTG+AGG | - | chr8_4:10630352-10630371 | None:intergenic | 50.0% |
| CGCAGCTGTAACGAATATCG+AGG | - | chr8_4:10630390-10630409 | None:intergenic | 50.0% | |
| TATCGGAGGGTTTGCCATCA+CGG | - | chr8_4:10630592-10630611 | None:intergenic | 50.0% | |
| CTTTGCAGCACCAAGTAGCA+TGG | - | chr8_4:10631508-10631527 | None:intergenic | 50.0% | |
| TCATGGCCACCCATAGAAAC+TGG | + | chr8_4:10631722-10631741 | Msa1313050:intron | 50.0% | |
| CATGGCCACCCATAGAAACT+GGG | + | chr8_4:10631723-10631742 | Msa1313050:intron | 50.0% | |
| ! | GTTTTCCAACCAGCAGAGGA+AGG | + | chr8_4:10632652-10632671 | Msa1313050:CDS | 50.0% |
| CTAGAGGCCACTTCACCAAT+TGG | - | chr8_4:10632763-10632782 | None:intergenic | 50.0% | |
| CAATTGGTGAAGTGGCCTCT+AGG | + | chr8_4:10632761-10632780 | Msa1313050:CDS | 50.0% | |
| AGGTCTGGTCCAATATTGGC+AGG | + | chr8_4:10632781-10632800 | Msa1313050:CDS | 50.0% | |
| GGTCCAATATTGGCAGGAAG+TGG | + | chr8_4:10632787-10632806 | Msa1313050:CDS | 50.0% | |
| GACCCCATATTAGCAGCTTC+CGG | + | chr8_4:10632871-10632890 | Msa1313050:CDS | 50.0% | |
| CACCGGAAGCTGCTAATATG+GGG | - | chr8_4:10632876-10632895 | None:intergenic | 50.0% | |
| GCACCGGAAGCTGCTAATAT+GGG | - | chr8_4:10632877-10632896 | None:intergenic | 50.0% | |
| TTGCAATCGTCACAACCTGC+GGG | - | chr8_4:10633568-10633587 | None:intergenic | 50.0% | |
| CCGGATCATGTCACAATTGG+TGG | + | chr8_4:10633620-10633639 | Msa1313050:CDS | 50.0% | |
| TTGGACAAGCTGCTGTGCAT+AGG | + | chr8_4:10634083-10634102 | Msa1313050:CDS | 50.0% | |
| GCATAGGTGCAATGCAACTG+TGG | + | chr8_4:10634099-10634118 | Msa1313050:CDS | 50.0% | |
| GCAACTGTGGACTTCCTTCA+TGG | + | chr8_4:10634112-10634131 | Msa1313050:CDS | 50.0% | |
| GCATGAAGTGCAGCTCCATA+AGG | - | chr8_4:10634391-10634410 | None:intergenic | 50.0% | |
| ! | GGACTAAATCCCCTCGGTGT+TGG | - | chr8_4:10630279-10630298 | None:intergenic | 55.0% |
| GCACTCCTCACCATACAAGC+CGG | + | chr8_4:10630344-10630363 | Msa1313050:intron | 55.0% | |
| ! | TTGGTGGGTATCCACCGTGA+TGG | + | chr8_4:10630575-10630594 | Msa1313050:intron | 55.0% |
| GGAGCAACATAGAGGCGACA+CGG | - | chr8_4:10630976-10630995 | None:intergenic | 55.0% | |
| !! | AGGAGCGTCGGGAGAAACAA+CGG | + | chr8_4:10631083-10631102 | Msa1313050:intron | 55.0% |
| TGTGTCGTCTCCCTCTCTTG+TGG | - | chr8_4:10631125-10631144 | None:intergenic | 55.0% | |
| CCACACGCATGCATCTTTCC+AGG | - | chr8_4:10631468-10631487 | None:intergenic | 55.0% | |
| CCTGGAAAGATGCATGCGTG+TGG | + | chr8_4:10631465-10631484 | Msa1313050:CDS | 55.0% | |
| GCCACCCATAGAAACTGGGA+GGG | + | chr8_4:10631727-10631746 | Msa1313050:intron | 55.0% | |
| ACCCTCCCAGTTTCTATGGG+TGG | - | chr8_4:10631731-10631750 | None:intergenic | 55.0% | |
| ! | TCTTGGTCTTCACCTCCTCG+TGG | + | chr8_4:10632579-10632598 | Msa1313050:intron | 55.0% |
| TTCCAACCAGCAGAGGAAGG+AGG | + | chr8_4:10632655-10632674 | Msa1313050:CDS | 55.0% | |
| TCCAACCAGCAGAGGAAGGA+GGG | + | chr8_4:10632656-10632675 | Msa1313050:CDS | 55.0% | |
| CGCACCGGAAGCTGCTAATA+TGG | - | chr8_4:10632878-10632897 | None:intergenic | 55.0% | |
| ! | GCAACACCTTGTTTCTCGCG+AGG | + | chr8_4:10632909-10632928 | Msa1313050:CDS | 55.0% |
| GATCAGCCTCGCGAGAAACA+AGG | - | chr8_4:10632918-10632937 | None:intergenic | 55.0% | |
| GGCTGATCCTTTAGACTCCC+AGG | + | chr8_4:10632930-10632949 | Msa1313050:CDS | 55.0% | |
| CCTCAATCCGCTGTCTCAGT+TGG | - | chr8_4:10633679-10633698 | None:intergenic | 55.0% | |
| !! | CCAACTGAGACAGCGGATTG+AGG | + | chr8_4:10633676-10633695 | Msa1313050:CDS | 55.0% |
| !! | ACTGAGACAGCGGATTGAGG+AGG | + | chr8_4:10633679-10633698 | Msa1313050:CDS | 55.0% |
| GTGTTAGCGGCCAACACCGA+GGG | + | chr8_4:10630266-10630285 | Msa1313050:intron | 60.0% | |
| TGTTAGCGGCCAACACCGAG+GGG | + | chr8_4:10630267-10630286 | Msa1313050:intron | 60.0% | |
| !! | GGAGCGTCGGGAGAAACAAC+GGG | + | chr8_4:10631084-10631103 | Msa1313050:intron | 60.0% |
| GGCCACCCATAGAAACTGGG+AGG | + | chr8_4:10631726-10631745 | Msa1313050:intron | 60.0% | |
| CCAACCAGCAGAGGAAGGAG+GGG | + | chr8_4:10632657-10632676 | Msa1313050:CDS | 60.0% | |
| CAACCAGCAGAGGAAGGAGG+GGG | + | chr8_4:10632658-10632677 | Msa1313050:CDS | 60.0% | |
| GGTGAAGTGGCCTCTAGGTC+TGG | + | chr8_4:10632766-10632785 | Msa1313050:CDS | 60.0% | |
| GGTGTTAGCGGCCAACACCG+AGG | + | chr8_4:10630265-10630284 | Msa1313050:intron | 65.0% | |
| CGGAGGGTTTGCCATCACGG+TGG | - | chr8_4:10630589-10630608 | None:intergenic | 65.0% | |
| ! | TGGGGAGTCAGGAGGAGCGT+CGG | + | chr8_4:10631071-10631090 | Msa1313050:intron | 65.0% |
| CCCCTCCTTCCTCTGCTGGT+TGG | - | chr8_4:10632660-10632679 | None:intergenic | 65.0% | |
| CAGCAGAGGAAGGAGGGGGA+GGG | + | chr8_4:10632662-10632681 | Msa1313050:CDS | 65.0% | |
| AGCAGAGGAAGGAGGGGGAG+GGG | + | chr8_4:10632663-10632682 | Msa1313050:CDS | 65.0% | |
| !! | GGGGAGTCAGGAGGAGCGTC+GGG | + | chr8_4:10631072-10631091 | Msa1313050:intron | 70.0% |
| CCTCCCCCTCCTTCCTCTGC+TGG | - | chr8_4:10632664-10632683 | None:intergenic | 70.0% | |
| CCAGCAGAGGAAGGAGGGGG+AGG | + | chr8_4:10632661-10632680 | Msa1313050:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 10629675 | 10634585 | 10629675 | ID=Msa1313050;Name=Msa1313050 |
| chr8_4 | mRNA | 10629675 | 10634585 | 10629675 | ID=Msa1313050-mRNA-1;Parent=Msa1313050;Name=Msa1313050-mRNA-1;_AED=0.36;_eAED=0.36;_QI=126|1|1|1|1|1|5|93|447 |
| chr8_4 | exon | 10629675 | 10630157 | 10629675 | ID=Msa1313050-mRNA-1:exon:3978;Parent=Msa1313050-mRNA-1 |
| chr8_4 | exon | 10631432 | 10631557 | 10631432 | ID=Msa1313050-mRNA-1:exon:3979;Parent=Msa1313050-mRNA-1 |
| chr8_4 | exon | 10632637 | 10632951 | 10632637 | ID=Msa1313050-mRNA-1:exon:3980;Parent=Msa1313050-mRNA-1 |
| chr8_4 | exon | 10633572 | 10633700 | 10633572 | ID=Msa1313050-mRNA-1:exon:3981;Parent=Msa1313050-mRNA-1 |
| chr8_4 | exon | 10634076 | 10634585 | 10634076 | ID=Msa1313050-mRNA-1:exon:3982;Parent=Msa1313050-mRNA-1 |
| chr8_4 | five_prime_UTR | 10629675 | 10629800 | 10629675 | ID=Msa1313050-mRNA-1:five_prime_utr;Parent=Msa1313050-mRNA-1 |
| chr8_4 | CDS | 10629801 | 10630157 | 10629801 | ID=Msa1313050-mRNA-1:cds;Parent=Msa1313050-mRNA-1 |
| chr8_4 | CDS | 10631432 | 10631557 | 10631432 | ID=Msa1313050-mRNA-1:cds;Parent=Msa1313050-mRNA-1 |
| chr8_4 | CDS | 10632637 | 10632951 | 10632637 | ID=Msa1313050-mRNA-1:cds;Parent=Msa1313050-mRNA-1 |
| chr8_4 | CDS | 10633572 | 10633700 | 10633572 | ID=Msa1313050-mRNA-1:cds;Parent=Msa1313050-mRNA-1 |
| chr8_4 | CDS | 10634076 | 10634492 | 10634076 | ID=Msa1313050-mRNA-1:cds;Parent=Msa1313050-mRNA-1 |
| chr8_4 | three_prime_UTR | 10634493 | 10634585 | 10634493 | ID=Msa1313050-mRNA-1:three_prime_utr;Parent=Msa1313050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
