Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0377930 | XP_003602603.1 | 92.500 | 360 | 24 | 1 | 1 | 360 | 1 | 357 | 0.0 | 689 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0377930 | sp|Q9FY82|NAC82_ARATH | 47.866 | 328 | 135 | 10 | 1 | 305 | 1 | 315 | 1.42e-89 | 280 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0377930 | G7JBJ4 | 92.500 | 360 | 24 | 1 | 1 | 360 | 1 | 357 | 0.0 | 689 |
Gene ID | Type | Classification |
---|---|---|
Msa0377930 | TF | NAC |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0014410 | Msa0377930 | -0.812094 | 5.039471e-51 | -8.615850e-47 |
Msa0154270 | Msa0377930 | -0.812309 | 4.523457e-51 | -8.615850e-47 |
Msa0377860 | Msa0377930 | 0.992091 | 2.993611e-191 | -8.615850e-47 |
Msa0377930 | Msa0473850 | 0.956561 | 2.204241e-114 | -8.615850e-47 |
Msa0377930 | Msa0518090 | 0.952113 | 4.868018e-110 | -8.615850e-47 |
Msa0377930 | Msa0667070 | 0.808063 | 3.723673e-50 | -8.615850e-47 |
Msa0377930 | Msa1204600 | 0.815515 | 8.888059e-52 | -8.615850e-47 |
Msa0377930 | Msa1241820 | -0.803741 | 3.015819e-49 | -8.615850e-47 |
Msa0377930 | Msa1313050 | -0.820341 | 7.219613e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0377930 | MtrunA17_Chr3g0130101 | 92.500 | 360 | 24 | 1 | 1 | 360 | 1 | 357 | 0.0 | 689 |
Msa0377930 | MtrunA17_Chr8g0364791 | 65.106 | 235 | 76 | 3 | 1 | 235 | 1 | 229 | 3.51e-106 | 318 |
Msa0377930 | MtrunA17_Chr8g0384201 | 64.255 | 235 | 78 | 3 | 1 | 235 | 1 | 229 | 1.08e-105 | 319 |
Msa0377930 | MtrunA17_Chr3g0092671 | 57.143 | 175 | 73 | 2 | 9 | 182 | 7 | 180 | 1.92e-68 | 224 |
Msa0377930 | MtrunA17_Chr1g0201021 | 50.754 | 199 | 93 | 1 | 1 | 194 | 13 | 211 | 4.42e-68 | 224 |
Msa0377930 | MtrunA17_Chr1g0197361 | 54.872 | 195 | 80 | 4 | 9 | 201 | 10 | 198 | 7.57e-68 | 224 |
Msa0377930 | MtrunA17_Chr1g0197351 | 56.742 | 178 | 70 | 2 | 7 | 178 | 42 | 218 | 2.75e-63 | 209 |
Msa0377930 | MtrunA17_Chr6g0481091 | 57.616 | 151 | 64 | 0 | 9 | 159 | 8 | 158 | 7.10e-61 | 195 |
Msa0377930 | MtrunA17_Chr3g0109821 | 55.215 | 163 | 69 | 3 | 9 | 168 | 8 | 169 | 7.67e-57 | 196 |
Msa0377930 | MtrunA17_Chr5g0433781 | 53.704 | 162 | 74 | 1 | 9 | 169 | 8 | 169 | 7.76e-57 | 195 |
Msa0377930 | MtrunA17_Chr2g0309891 | 55.333 | 150 | 66 | 1 | 9 | 157 | 8 | 157 | 4.25e-56 | 186 |
Msa0377930 | MtrunA17_Chr4g0060931 | 51.592 | 157 | 72 | 2 | 9 | 163 | 19 | 173 | 1.52e-50 | 172 |
Msa0377930 | MtrunA17_Chr5g0428991 | 39.453 | 256 | 144 | 5 | 10 | 259 | 28 | 278 | 2.79e-50 | 177 |
Msa0377930 | MtrunA17_Chr4g0018391 | 51.656 | 151 | 68 | 3 | 9 | 157 | 9 | 156 | 4.57e-50 | 171 |
Msa0377930 | MtrunA17_Chr3g0128151 | 43.961 | 207 | 96 | 3 | 10 | 209 | 25 | 218 | 5.96e-50 | 176 |
Msa0377930 | MtrunA17_Chr2g0309331 | 51.974 | 152 | 69 | 3 | 9 | 158 | 12 | 161 | 1.23e-49 | 169 |
Msa0377930 | MtrunA17_Chr1g0200561 | 49.686 | 159 | 75 | 3 | 9 | 165 | 21 | 176 | 1.61e-49 | 169 |
Msa0377930 | MtrunA17_Chr3g0091921 | 51.250 | 160 | 74 | 2 | 6 | 163 | 15 | 172 | 2.09e-49 | 168 |
Msa0377930 | MtrunA17_Chr8g0372121 | 41.346 | 208 | 109 | 5 | 9 | 214 | 8 | 204 | 3.90e-49 | 167 |
Msa0377930 | MtrunA17_Chr5g0400461 | 46.286 | 175 | 84 | 2 | 9 | 176 | 8 | 179 | 5.52e-49 | 167 |
Msa0377930 | MtrunA17_Chr3g0124761 | 49.383 | 162 | 76 | 3 | 1 | 159 | 1 | 159 | 5.70e-49 | 166 |
Msa0377930 | MtrunA17_Chr2g0316971 | 53.165 | 158 | 66 | 4 | 9 | 161 | 25 | 179 | 2.64e-48 | 167 |
Msa0377930 | MtrunA17_Chr4g0054791 | 39.474 | 228 | 114 | 4 | 9 | 212 | 8 | 235 | 3.02e-48 | 165 |
Msa0377930 | MtrunA17_Chr5g0405211 | 49.669 | 151 | 71 | 3 | 9 | 157 | 10 | 157 | 4.40e-48 | 166 |
Msa0377930 | MtrunA17_Chr3g0128111 | 48.000 | 150 | 78 | 0 | 8 | 157 | 43 | 192 | 4.94e-48 | 162 |
Msa0377930 | MtrunA17_Chr6g0484441 | 51.678 | 149 | 68 | 2 | 9 | 157 | 7 | 151 | 6.81e-48 | 164 |
Msa0377930 | MtrunA17_Chr4g0017921 | 50.331 | 151 | 71 | 2 | 9 | 158 | 10 | 157 | 9.27e-48 | 165 |
Msa0377930 | MtrunA17_Chr2g0318081 | 47.651 | 149 | 76 | 1 | 9 | 157 | 18 | 164 | 1.11e-47 | 165 |
Msa0377930 | MtrunA17_Chr4g0056541 | 50.993 | 151 | 69 | 3 | 9 | 157 | 9 | 156 | 1.61e-47 | 164 |
Msa0377930 | MtrunA17_Chr7g0252971 | 45.062 | 162 | 74 | 3 | 9 | 157 | 10 | 169 | 4.77e-47 | 162 |
Msa0377930 | MtrunA17_Chr7g0253011 | 51.282 | 156 | 66 | 4 | 9 | 157 | 19 | 171 | 5.70e-47 | 164 |
Msa0377930 | MtrunA17_Chr6g0453451 | 46.154 | 169 | 83 | 3 | 9 | 173 | 22 | 186 | 1.47e-46 | 161 |
Msa0377930 | MtrunA17_Chr8g0361731 | 45.732 | 164 | 76 | 4 | 5 | 157 | 12 | 173 | 1.67e-45 | 160 |
Msa0377930 | MtrunA17_Chr7g0263931 | 36.522 | 230 | 119 | 6 | 9 | 225 | 13 | 228 | 3.82e-45 | 157 |
Msa0377930 | MtrunA17_Chr3g0139331 | 48.408 | 157 | 75 | 3 | 9 | 163 | 13 | 165 | 4.65e-45 | 157 |
Msa0377930 | MtrunA17_Chr6g0453131 | 45.963 | 161 | 75 | 4 | 7 | 157 | 15 | 173 | 6.77e-45 | 158 |
Msa0377930 | MtrunA17_Chr5g0417791 | 47.403 | 154 | 75 | 2 | 9 | 158 | 5 | 156 | 1.68e-44 | 154 |
Msa0377930 | MtrunA17_Chr2g0318101 | 45.062 | 162 | 74 | 4 | 9 | 157 | 17 | 176 | 3.17e-44 | 155 |
Msa0377930 | MtrunA17_Chr4g0076731 | 45.570 | 158 | 81 | 3 | 3 | 159 | 50 | 203 | 4.89e-44 | 157 |
Msa0377930 | MtrunA17_Chr5g0398971 | 46.405 | 153 | 75 | 5 | 9 | 157 | 9 | 158 | 6.55e-44 | 155 |
Msa0377930 | MtrunA17_Chr7g0217721 | 43.503 | 177 | 82 | 4 | 10 | 170 | 22 | 196 | 8.83e-44 | 154 |
Msa0377930 | MtrunA17_Chr4g0042561 | 44.586 | 157 | 81 | 3 | 9 | 161 | 11 | 165 | 1.38e-43 | 152 |
Msa0377930 | MtrunA17_Chr5g0417001 | 44.172 | 163 | 79 | 4 | 5 | 157 | 12 | 172 | 2.41e-43 | 154 |
Msa0377930 | MtrunA17_Chr8g0359921 | 47.020 | 151 | 76 | 2 | 9 | 157 | 16 | 164 | 2.64e-43 | 152 |
Msa0377930 | MtrunA17_Chr7g0214071 | 47.561 | 164 | 71 | 5 | 9 | 167 | 17 | 170 | 4.03e-43 | 150 |
Msa0377930 | MtrunA17_Chr4g0047841 | 43.182 | 176 | 73 | 4 | 7 | 157 | 15 | 188 | 6.53e-43 | 152 |
Msa0377930 | MtrunA17_Chr2g0326361 | 47.097 | 155 | 74 | 4 | 9 | 157 | 16 | 168 | 7.36e-43 | 151 |
Msa0377930 | MtrunA17_Chr4g0038751 | 45.000 | 160 | 78 | 4 | 1 | 157 | 9 | 161 | 1.38e-42 | 150 |
Msa0377930 | MtrunA17_Chr8g0384721 | 45.806 | 155 | 77 | 3 | 9 | 159 | 9 | 160 | 1.93e-42 | 149 |
Msa0377930 | MtrunA17_Chr8g0346001 | 43.125 | 160 | 81 | 2 | 9 | 158 | 17 | 176 | 2.90e-42 | 152 |
Msa0377930 | MtrunA17_Chr6g0461661 | 46.405 | 153 | 74 | 4 | 10 | 157 | 21 | 170 | 3.04e-42 | 151 |
Msa0377930 | MtrunA17_Chr1g0147421 | 48.052 | 154 | 73 | 4 | 9 | 159 | 29 | 178 | 9.93e-42 | 149 |
Msa0377930 | MtrunA17_Chr3g0130731 | 46.104 | 154 | 77 | 3 | 9 | 159 | 9 | 159 | 1.53e-41 | 147 |
Msa0377930 | MtrunA17_Chr2g0312321 | 47.531 | 162 | 71 | 5 | 1 | 157 | 6 | 158 | 2.25e-41 | 147 |
Msa0377930 | MtrunA17_Chr7g0217711 | 48.889 | 135 | 67 | 1 | 10 | 144 | 22 | 154 | 6.54e-40 | 139 |
Msa0377930 | MtrunA17_Chr1g0183741 | 45.033 | 151 | 75 | 3 | 9 | 157 | 12 | 156 | 1.58e-39 | 141 |
Msa0377930 | MtrunA17_Chr7g0261411 | 44.667 | 150 | 75 | 3 | 9 | 156 | 12 | 155 | 9.89e-38 | 137 |
Msa0377930 | MtrunA17_Chr5g0442771 | 40.719 | 167 | 85 | 3 | 3 | 157 | 14 | 178 | 1.37e-37 | 137 |
Msa0377930 | MtrunA17_Chr8g0345671 | 47.297 | 148 | 69 | 5 | 10 | 154 | 14 | 155 | 1.74e-37 | 139 |
Msa0377930 | MtrunA17_Chr2g0311651 | 41.212 | 165 | 81 | 3 | 8 | 157 | 23 | 186 | 3.20e-37 | 136 |
Msa0377930 | MtrunA17_Chr2g0321741 | 46.875 | 128 | 60 | 2 | 27 | 154 | 12 | 131 | 4.50e-37 | 137 |
Msa0377930 | MtrunA17_Chr8g0385991 | 41.071 | 168 | 84 | 4 | 9 | 169 | 16 | 175 | 5.98e-37 | 133 |
Msa0377930 | MtrunA17_Chr8g0345691 | 43.919 | 148 | 74 | 5 | 10 | 154 | 15 | 156 | 6.72e-36 | 135 |
Msa0377930 | MtrunA17_Chr3g0144271 | 44.295 | 149 | 71 | 5 | 9 | 154 | 25 | 164 | 1.08e-35 | 134 |
Msa0377930 | MtrunA17_Chr2g0311661 | 40.606 | 165 | 82 | 4 | 8 | 157 | 22 | 185 | 3.08e-35 | 130 |
Msa0377930 | MtrunA17_Chr3g0131911 | 40.719 | 167 | 85 | 3 | 9 | 165 | 16 | 178 | 2.59e-34 | 126 |
Msa0377930 | MtrunA17_Chr8g0345711 | 46.825 | 126 | 63 | 3 | 10 | 132 | 15 | 139 | 1.04e-33 | 122 |
Msa0377930 | MtrunA17_Chr4g0026141 | 38.217 | 157 | 90 | 5 | 6 | 155 | 4 | 160 | 3.59e-30 | 116 |
Msa0377930 | MtrunA17_Chr2g0321631 | 39.355 | 155 | 86 | 6 | 9 | 155 | 6 | 160 | 3.88e-30 | 115 |
Msa0377930 | MtrunA17_Chr8g0345741 | 42.857 | 140 | 71 | 5 | 20 | 156 | 4 | 137 | 1.16e-29 | 111 |
Msa0377930 | MtrunA17_Chr3g0113001 | 44.167 | 120 | 64 | 1 | 57 | 173 | 13 | 132 | 2.23e-29 | 115 |
Msa0377930 | MtrunA17_Chr7g0266701 | 33.036 | 224 | 127 | 9 | 7 | 211 | 4 | 223 | 2.95e-29 | 113 |
Msa0377930 | MtrunA17_Chr8g0345731 | 41.722 | 151 | 78 | 6 | 10 | 154 | 27 | 173 | 1.59e-28 | 109 |
Msa0377930 | MtrunA17_Chr8g0345721 | 38.272 | 162 | 64 | 5 | 10 | 136 | 38 | 198 | 3.48e-27 | 106 |
Msa0377930 | MtrunA17_Chr4g0050701 | 38.125 | 160 | 77 | 6 | 9 | 158 | 13 | 160 | 1.10e-26 | 104 |
Msa0377930 | MtrunA17_Chr8g0345701 | 43.243 | 148 | 63 | 6 | 3 | 132 | 2 | 146 | 1.27e-26 | 104 |
Msa0377930 | MtrunA17_Chr3g0113031 | 45.631 | 103 | 51 | 2 | 73 | 170 | 4 | 106 | 1.12e-25 | 104 |
Msa0377930 | MtrunA17_Chr8g0384351 | 36.250 | 160 | 76 | 7 | 9 | 166 | 12 | 147 | 2.54e-20 | 87.4 |
Msa0377930 | MtrunA17_Chr3g0130321 | 33.516 | 182 | 98 | 8 | 1 | 168 | 1 | 173 | 4.38e-19 | 84.7 |
Msa0377930 | MtrunA17_Chr7g0243371 | 48.750 | 80 | 39 | 1 | 57 | 134 | 12 | 91 | 4.45e-19 | 82.0 |
Msa0377930 | MtrunA17_Chr7g0251651 | 29.851 | 134 | 89 | 4 | 1 | 132 | 11 | 141 | 2.46e-14 | 70.9 |
Msa0377930 | MtrunA17_Chr7g0251661 | 29.839 | 124 | 83 | 3 | 10 | 132 | 13 | 133 | 3.41e-13 | 66.6 |
Msa0377930 | MtrunA17_Chr1g0194791 | 60.870 | 46 | 17 | 1 | 9 | 53 | 48 | 93 | 4.78e-13 | 64.7 |
Msa0377930 | MtrunA17_Chr7g0274971 | 34.194 | 155 | 84 | 10 | 13 | 157 | 11 | 157 | 1.27e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0377930 | AT5G09330.5 | 47.866 | 328 | 135 | 10 | 1 | 305 | 1 | 315 | 1.45e-90 | 280 |
Msa0377930 | AT5G09330.2 | 47.866 | 328 | 135 | 10 | 1 | 305 | 1 | 315 | 1.45e-90 | 280 |
Msa0377930 | AT5G09330.4 | 47.866 | 328 | 135 | 10 | 1 | 305 | 1 | 315 | 1.45e-90 | 280 |
Msa0377930 | AT5G09330.3 | 47.866 | 328 | 135 | 10 | 1 | 305 | 1 | 315 | 1.45e-90 | 280 |
Msa0377930 | AT5G09330.1 | 47.866 | 328 | 135 | 10 | 1 | 305 | 1 | 315 | 1.45e-90 | 280 |
Msa0377930 | AT5G64060.1 | 55.042 | 238 | 99 | 3 | 1 | 238 | 1 | 230 | 6.19e-88 | 269 |
Msa0377930 | AT5G04410.1 | 61.538 | 182 | 69 | 1 | 7 | 188 | 9 | 189 | 1.01e-78 | 252 |
Msa0377930 | AT3G10500.1 | 63.253 | 166 | 61 | 0 | 7 | 172 | 9 | 174 | 1.94e-74 | 240 |
Msa0377930 | AT1G34190.1 | 47.867 | 211 | 109 | 1 | 5 | 215 | 14 | 223 | 1.15e-67 | 223 |
Msa0377930 | AT3G10480.2 | 56.725 | 171 | 73 | 1 | 7 | 177 | 27 | 196 | 8.12e-65 | 212 |
Msa0377930 | AT3G10480.1 | 56.977 | 172 | 72 | 2 | 7 | 177 | 27 | 197 | 1.36e-64 | 212 |
Msa0377930 | AT3G10490.1 | 55.114 | 176 | 77 | 2 | 7 | 181 | 27 | 201 | 3.41e-64 | 204 |
Msa0377930 | AT3G10490.2 | 55.114 | 176 | 77 | 2 | 7 | 181 | 27 | 201 | 5.05e-63 | 208 |
Msa0377930 | AT1G34180.3 | 50.267 | 187 | 92 | 1 | 5 | 190 | 14 | 200 | 1.27e-62 | 207 |
Msa0377930 | AT1G34180.1 | 50.267 | 187 | 92 | 1 | 5 | 190 | 14 | 200 | 1.07e-61 | 207 |
Msa0377930 | AT3G17730.1 | 58.278 | 151 | 63 | 0 | 9 | 159 | 8 | 158 | 2.42e-60 | 194 |
Msa0377930 | AT1G34180.4 | 47.236 | 199 | 92 | 2 | 5 | 190 | 14 | 212 | 1.96e-59 | 199 |
Msa0377930 | AT3G10480.3 | 48.293 | 205 | 71 | 3 | 7 | 177 | 27 | 230 | 3.33e-59 | 200 |
Msa0377930 | AT1G65910.1 | 52.273 | 176 | 83 | 1 | 7 | 181 | 6 | 181 | 1.21e-58 | 200 |
Msa0377930 | AT1G34180.2 | 47.236 | 199 | 92 | 2 | 5 | 190 | 14 | 212 | 1.33e-58 | 199 |
Msa0377930 | AT1G33060.1 | 54.054 | 148 | 68 | 0 | 10 | 157 | 27 | 174 | 1.62e-54 | 189 |
Msa0377930 | AT1G33060.2 | 54.054 | 148 | 68 | 0 | 10 | 157 | 27 | 174 | 1.72e-54 | 189 |
Msa0377930 | AT3G03200.1 | 55.333 | 150 | 66 | 1 | 9 | 157 | 8 | 157 | 6.40e-54 | 185 |
Msa0377930 | AT5G24590.2 | 46.860 | 207 | 92 | 5 | 10 | 215 | 16 | 205 | 1.05e-53 | 183 |
Msa0377930 | AT5G17260.1 | 52.667 | 150 | 70 | 1 | 9 | 157 | 8 | 157 | 8.54e-53 | 182 |
Msa0377930 | AT2G27300.1 | 53.378 | 148 | 61 | 2 | 7 | 154 | 14 | 153 | 1.25e-52 | 177 |
Msa0377930 | AT3G49530.2 | 51.333 | 150 | 72 | 1 | 10 | 158 | 16 | 165 | 3.53e-51 | 176 |
Msa0377930 | AT1G54330.1 | 52.903 | 155 | 70 | 1 | 9 | 163 | 8 | 159 | 4.27e-51 | 172 |
Msa0377930 | AT4G35580.1 | 54.054 | 148 | 68 | 0 | 10 | 157 | 12 | 159 | 4.32e-51 | 178 |
Msa0377930 | AT4G17980.1 | 51.266 | 158 | 73 | 2 | 4 | 157 | 3 | 160 | 5.00e-51 | 171 |
Msa0377930 | AT4G35580.2 | 54.054 | 148 | 68 | 0 | 10 | 157 | 12 | 159 | 5.39e-51 | 178 |
Msa0377930 | AT4G35580.3 | 54.054 | 148 | 68 | 0 | 10 | 157 | 12 | 159 | 5.52e-51 | 178 |
Msa0377930 | AT5G61430.1 | 52.866 | 157 | 70 | 2 | 9 | 163 | 18 | 172 | 7.36e-51 | 173 |
Msa0377930 | AT4G17980.2 | 51.266 | 158 | 73 | 2 | 4 | 157 | 3 | 160 | 1.04e-50 | 171 |
Msa0377930 | AT3G49530.1 | 51.333 | 150 | 72 | 1 | 10 | 158 | 16 | 165 | 1.23e-50 | 176 |
Msa0377930 | AT5G22290.1 | 47.126 | 174 | 76 | 3 | 3 | 167 | 17 | 183 | 1.30e-50 | 172 |
Msa0377930 | AT5G39610.1 | 54.430 | 158 | 66 | 3 | 9 | 163 | 22 | 176 | 1.98e-50 | 170 |
Msa0377930 | AT5G46590.1 | 49.359 | 156 | 77 | 2 | 4 | 157 | 3 | 158 | 1.20e-49 | 168 |
Msa0377930 | AT1G71930.2 | 48.734 | 158 | 78 | 2 | 7 | 163 | 9 | 164 | 2.90e-49 | 168 |
Msa0377930 | AT1G71930.1 | 48.734 | 158 | 78 | 2 | 7 | 163 | 9 | 164 | 2.90e-49 | 168 |
Msa0377930 | AT4G10350.1 | 50.331 | 151 | 74 | 1 | 9 | 158 | 11 | 161 | 3.87e-49 | 169 |
Msa0377930 | AT3G44290.2 | 51.020 | 147 | 64 | 2 | 8 | 154 | 15 | 153 | 7.21e-49 | 164 |
Msa0377930 | AT3G18400.1 | 51.678 | 149 | 69 | 2 | 9 | 157 | 7 | 152 | 8.53e-49 | 167 |
Msa0377930 | AT5G07680.2 | 51.592 | 157 | 72 | 2 | 9 | 163 | 5 | 159 | 8.94e-49 | 167 |
Msa0377930 | AT1G32870.2 | 51.786 | 168 | 77 | 2 | 7 | 172 | 10 | 175 | 9.97e-49 | 172 |
Msa0377930 | AT1G32870.1 | 51.786 | 168 | 77 | 2 | 7 | 172 | 10 | 175 | 1.22e-48 | 172 |
Msa0377930 | AT5G07680.1 | 51.592 | 157 | 72 | 2 | 9 | 163 | 19 | 173 | 1.32e-48 | 167 |
Msa0377930 | AT1G12260.2 | 47.561 | 164 | 77 | 4 | 9 | 168 | 9 | 167 | 1.60e-48 | 167 |
Msa0377930 | AT1G12260.1 | 47.561 | 164 | 77 | 4 | 9 | 168 | 9 | 167 | 2.41e-48 | 168 |
Msa0377930 | AT1G32870.3 | 51.786 | 168 | 77 | 2 | 7 | 172 | 46 | 211 | 2.86e-48 | 171 |
Msa0377930 | AT3G44290.1 | 51.370 | 146 | 63 | 2 | 9 | 154 | 16 | 153 | 5.69e-48 | 165 |
Msa0377930 | AT2G18060.3 | 41.500 | 200 | 104 | 4 | 9 | 206 | 11 | 199 | 6.09e-48 | 166 |
Msa0377930 | AT2G18060.1 | 41.500 | 200 | 104 | 4 | 9 | 206 | 11 | 199 | 6.09e-48 | 166 |
Msa0377930 | AT5G18270.2 | 44.811 | 212 | 105 | 6 | 9 | 215 | 23 | 227 | 6.26e-48 | 165 |
Msa0377930 | AT5G46590.2 | 52.174 | 138 | 65 | 1 | 4 | 140 | 3 | 140 | 1.21e-47 | 163 |
Msa0377930 | AT1G01720.1 | 46.746 | 169 | 83 | 3 | 1 | 165 | 1 | 166 | 1.74e-47 | 162 |
Msa0377930 | AT5G18270.1 | 44.340 | 212 | 106 | 6 | 9 | 215 | 23 | 227 | 1.88e-47 | 164 |
Msa0377930 | AT1G33280.1 | 49.669 | 151 | 72 | 2 | 9 | 158 | 10 | 157 | 2.15e-47 | 163 |
Msa0377930 | AT2G24430.2 | 50.318 | 157 | 73 | 3 | 3 | 157 | 12 | 165 | 3.26e-47 | 163 |
Msa0377930 | AT2G24430.1 | 50.318 | 157 | 73 | 3 | 3 | 157 | 12 | 165 | 3.26e-47 | 163 |
Msa0377930 | AT1G77450.1 | 48.701 | 154 | 73 | 3 | 9 | 159 | 12 | 162 | 4.02e-47 | 160 |
Msa0377930 | AT3G29035.1 | 49.697 | 165 | 79 | 2 | 9 | 171 | 26 | 188 | 5.65e-47 | 162 |
Msa0377930 | AT1G62700.1 | 48.701 | 154 | 70 | 4 | 9 | 158 | 9 | 157 | 7.71e-47 | 164 |
Msa0377930 | AT1G62700.2 | 48.701 | 154 | 70 | 4 | 9 | 158 | 9 | 157 | 7.71e-47 | 164 |
Msa0377930 | AT4G36160.1 | 48.026 | 152 | 74 | 3 | 9 | 158 | 12 | 160 | 1.48e-46 | 163 |
Msa0377930 | AT4G36160.3 | 48.026 | 152 | 74 | 3 | 9 | 158 | 12 | 160 | 1.48e-46 | 163 |
Msa0377930 | AT4G36160.2 | 48.026 | 152 | 74 | 3 | 9 | 158 | 16 | 164 | 1.57e-46 | 163 |
Msa0377930 | AT1G69490.1 | 38.756 | 209 | 110 | 3 | 9 | 201 | 11 | 217 | 2.30e-46 | 159 |
Msa0377930 | AT4G27410.2 | 45.513 | 156 | 83 | 1 | 9 | 164 | 16 | 169 | 3.02e-46 | 160 |
Msa0377930 | AT1G52890.1 | 47.333 | 150 | 77 | 1 | 9 | 158 | 16 | 163 | 3.43e-46 | 160 |
Msa0377930 | AT3G15170.1 | 48.765 | 162 | 77 | 3 | 6 | 163 | 19 | 178 | 6.43e-46 | 159 |
Msa0377930 | AT3G15500.1 | 46.667 | 150 | 78 | 1 | 9 | 158 | 16 | 163 | 9.18e-46 | 159 |
Msa0377930 | AT5G53950.1 | 50.311 | 161 | 72 | 4 | 2 | 157 | 12 | 169 | 3.27e-45 | 159 |
Msa0377930 | AT5G08790.1 | 46.626 | 163 | 78 | 4 | 3 | 159 | 2 | 161 | 3.29e-45 | 157 |
Msa0377930 | AT1G56010.2 | 45.506 | 178 | 90 | 4 | 1 | 174 | 14 | 188 | 3.83e-45 | 157 |
Msa0377930 | AT3G04060.1 | 49.677 | 155 | 73 | 3 | 9 | 160 | 22 | 174 | 6.43e-45 | 157 |
Msa0377930 | AT1G79580.3 | 48.026 | 152 | 74 | 3 | 9 | 158 | 19 | 167 | 6.71e-45 | 158 |
Msa0377930 | AT1G79580.5 | 48.026 | 152 | 74 | 3 | 9 | 158 | 19 | 167 | 6.71e-45 | 158 |
Msa0377930 | AT1G79580.4 | 48.026 | 152 | 74 | 3 | 9 | 158 | 19 | 167 | 6.71e-45 | 158 |
Msa0377930 | AT1G79580.2 | 48.026 | 152 | 74 | 3 | 9 | 158 | 19 | 167 | 6.71e-45 | 158 |
Msa0377930 | AT1G79580.1 | 48.026 | 152 | 74 | 3 | 9 | 158 | 19 | 167 | 6.71e-45 | 158 |
Msa0377930 | AT1G32510.1 | 45.000 | 160 | 80 | 2 | 6 | 157 | 5 | 164 | 1.99e-44 | 154 |
Msa0377930 | AT5G62380.2 | 48.684 | 152 | 73 | 3 | 9 | 158 | 9 | 157 | 2.75e-44 | 156 |
Msa0377930 | AT5G62380.1 | 48.684 | 152 | 73 | 3 | 9 | 158 | 9 | 157 | 2.75e-44 | 156 |
Msa0377930 | AT5G66300.1 | 45.181 | 166 | 85 | 4 | 9 | 171 | 14 | 176 | 4.18e-44 | 154 |
Msa0377930 | AT3G12977.1 | 46.753 | 154 | 79 | 2 | 9 | 161 | 20 | 171 | 1.49e-43 | 152 |
Msa0377930 | AT1G61110.1 | 47.531 | 162 | 70 | 4 | 9 | 157 | 18 | 177 | 2.43e-43 | 153 |
Msa0377930 | AT2G02450.1 | 44.516 | 155 | 81 | 3 | 6 | 159 | 50 | 200 | 3.69e-43 | 154 |
Msa0377930 | AT3G04070.2 | 44.099 | 161 | 76 | 3 | 9 | 157 | 12 | 170 | 4.45e-43 | 152 |
Msa0377930 | AT2G02450.2 | 44.516 | 155 | 81 | 3 | 6 | 159 | 50 | 200 | 5.68e-43 | 154 |
Msa0377930 | AT4G27410.3 | 40.936 | 171 | 86 | 1 | 9 | 164 | 16 | 186 | 9.79e-43 | 151 |
Msa0377930 | AT5G39820.1 | 42.857 | 175 | 75 | 5 | 6 | 157 | 19 | 191 | 9.98e-43 | 152 |
Msa0377930 | AT1G26870.1 | 44.785 | 163 | 77 | 4 | 6 | 157 | 15 | 175 | 1.39e-42 | 153 |
Msa0377930 | AT5G13180.1 | 48.125 | 160 | 71 | 4 | 9 | 164 | 16 | 167 | 2.61e-42 | 148 |
Msa0377930 | AT1G76420.1 | 48.366 | 153 | 74 | 3 | 9 | 159 | 24 | 173 | 3.42e-42 | 150 |
Msa0377930 | AT3G15510.1 | 43.069 | 202 | 89 | 9 | 11 | 198 | 21 | 210 | 3.46e-42 | 151 |
Msa0377930 | AT5G63790.1 | 44.785 | 163 | 81 | 4 | 3 | 159 | 45 | 204 | 6.40e-42 | 149 |
Msa0377930 | AT5G63790.2 | 44.785 | 163 | 81 | 4 | 3 | 159 | 55 | 214 | 7.47e-42 | 149 |
Msa0377930 | AT3G04070.1 | 39.720 | 214 | 109 | 6 | 9 | 215 | 12 | 212 | 1.70e-41 | 149 |
Msa0377930 | AT2G33480.1 | 51.634 | 153 | 63 | 4 | 9 | 158 | 17 | 161 | 1.77e-41 | 146 |
Msa0377930 | AT2G17040.1 | 44.444 | 153 | 75 | 4 | 8 | 157 | 7 | 152 | 2.83e-41 | 146 |
Msa0377930 | AT2G33480.2 | 50.000 | 152 | 65 | 3 | 9 | 158 | 17 | 159 | 3.87e-41 | 145 |
Msa0377930 | AT2G43000.1 | 42.949 | 156 | 86 | 2 | 3 | 157 | 14 | 167 | 2.72e-40 | 143 |
Msa0377930 | AT1G32770.1 | 41.975 | 162 | 83 | 2 | 9 | 159 | 18 | 179 | 3.66e-40 | 145 |
Msa0377930 | AT3G61910.1 | 43.636 | 165 | 75 | 4 | 9 | 157 | 13 | 175 | 9.17e-40 | 144 |
Msa0377930 | AT2G46770.1 | 40.964 | 166 | 80 | 3 | 9 | 158 | 18 | 181 | 2.49e-39 | 143 |
Msa0377930 | AT1G52880.1 | 45.283 | 159 | 73 | 4 | 11 | 157 | 21 | 177 | 1.07e-38 | 140 |
Msa0377930 | AT5G04395.1 | 43.452 | 168 | 77 | 4 | 2 | 155 | 24 | 187 | 1.85e-36 | 130 |
Msa0377930 | AT4G28530.1 | 43.114 | 167 | 71 | 4 | 9 | 157 | 12 | 172 | 5.53e-36 | 134 |
Msa0377930 | AT3G12910.1 | 38.953 | 172 | 85 | 4 | 3 | 157 | 17 | 185 | 3.91e-34 | 128 |
Msa0377930 | AT5G61430.2 | 55.046 | 109 | 47 | 1 | 57 | 163 | 1 | 109 | 8.00e-34 | 126 |
Msa0377930 | AT1G56010.1 | 47.863 | 117 | 58 | 1 | 61 | 174 | 5 | 121 | 1.44e-30 | 117 |
Msa0377930 | AT3G12977.2 | 49.524 | 105 | 52 | 1 | 59 | 162 | 15 | 119 | 1.76e-30 | 116 |
Msa0377930 | AT4G10350.2 | 50.526 | 95 | 47 | 0 | 64 | 158 | 20 | 114 | 1.22e-29 | 115 |
Msa0377930 | AT3G10490.4 | 53.922 | 102 | 45 | 2 | 81 | 181 | 1 | 101 | 4.43e-29 | 115 |
Msa0377930 | AT3G10490.3 | 53.922 | 102 | 45 | 2 | 81 | 181 | 1 | 101 | 4.43e-29 | 115 |
Msa0377930 | AT4G01520.1 | 40.000 | 155 | 79 | 5 | 10 | 157 | 7 | 154 | 5.21e-29 | 114 |
Msa0377930 | AT4G01550.1 | 40.698 | 172 | 83 | 7 | 10 | 171 | 7 | 169 | 1.25e-28 | 116 |
Msa0377930 | AT5G22380.1 | 38.217 | 157 | 90 | 5 | 10 | 159 | 8 | 164 | 2.15e-28 | 111 |
Msa0377930 | AT4G01540.3 | 40.000 | 155 | 79 | 5 | 10 | 157 | 7 | 154 | 3.94e-28 | 114 |
Msa0377930 | AT3G44350.2 | 38.710 | 155 | 90 | 5 | 10 | 159 | 8 | 162 | 5.56e-28 | 110 |
Msa0377930 | AT4G01540.4 | 40.000 | 155 | 79 | 5 | 10 | 157 | 7 | 154 | 6.39e-28 | 113 |
Msa0377930 | AT4G01540.1 | 40.000 | 155 | 79 | 5 | 10 | 157 | 7 | 154 | 6.60e-28 | 114 |
Msa0377930 | AT4G01540.2 | 40.000 | 155 | 79 | 5 | 10 | 157 | 7 | 154 | 7.03e-28 | 113 |
Msa0377930 | AT1G02230.1 | 40.127 | 157 | 77 | 6 | 6 | 154 | 1 | 148 | 2.61e-25 | 105 |
Msa0377930 | AT3G44350.1 | 37.908 | 153 | 90 | 5 | 10 | 157 | 8 | 160 | 2.85e-25 | 100 |
Msa0377930 | AT3G04420.2 | 37.333 | 150 | 87 | 2 | 10 | 157 | 6 | 150 | 2.51e-24 | 101 |
Msa0377930 | AT3G04420.1 | 40.800 | 125 | 72 | 1 | 10 | 132 | 6 | 130 | 6.99e-24 | 101 |
Msa0377930 | AT2G33480.3 | 49.524 | 105 | 49 | 3 | 57 | 158 | 1 | 104 | 1.67e-23 | 97.1 |
Msa0377930 | AT1G02250.1 | 38.816 | 152 | 77 | 5 | 10 | 154 | 6 | 148 | 1.08e-21 | 95.1 |
Msa0377930 | AT5G64530.1 | 35.329 | 167 | 74 | 7 | 9 | 157 | 5 | 155 | 1.19e-20 | 89.0 |
Msa0377930 | AT5G64530.2 | 40.909 | 132 | 58 | 6 | 9 | 136 | 5 | 120 | 6.36e-20 | 85.9 |
Msa0377930 | AT1G01010.1 | 38.608 | 158 | 74 | 7 | 10 | 154 | 6 | 153 | 6.85e-20 | 90.9 |
Msa0377930 | AT1G02220.1 | 35.294 | 153 | 79 | 5 | 10 | 155 | 6 | 145 | 1.18e-19 | 89.7 |
Msa0377930 | AT2G18060.2 | 36.364 | 121 | 65 | 3 | 87 | 206 | 2 | 111 | 3.04e-19 | 87.0 |
Msa0377930 | AT4G28530.2 | 38.281 | 128 | 59 | 3 | 9 | 118 | 12 | 137 | 4.30e-19 | 87.0 |
Msa0377930 | AT5G22290.2 | 42.222 | 90 | 37 | 2 | 87 | 167 | 1 | 84 | 8.36e-18 | 82.0 |
Msa0377930 | AT2G43000.2 | 39.080 | 87 | 52 | 1 | 72 | 157 | 3 | 89 | 2.28e-15 | 74.3 |
Msa0377930 | AT3G56530.1 | 30.263 | 152 | 95 | 4 | 9 | 155 | 54 | 199 | 2.21e-14 | 73.6 |
Msa0377930 | AT5G14000.2 | 33.071 | 127 | 79 | 3 | 10 | 134 | 18 | 140 | 1.67e-12 | 65.1 |
Msa0377930 | AT5G14000.1 | 33.071 | 127 | 79 | 3 | 10 | 134 | 18 | 140 | 3.68e-12 | 65.5 |
Msa0377930 | AT3G55210.1 | 25.904 | 166 | 99 | 6 | 6 | 155 | 10 | 167 | 3.38e-11 | 63.5 |
Msa0377930 | AT1G28470.1 | 30.939 | 181 | 99 | 9 | 10 | 173 | 80 | 251 | 3.82e-11 | 63.9 |
Msa0377930 | AT3G04430.1 | 30.435 | 138 | 72 | 6 | 13 | 133 | 6 | 136 | 4.26e-11 | 62.0 |
Find 164 sgRNAs with CRISPR-Local
Find 398 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGTTTCTGTTTGTTGAATT+TGG | 0.123004 | 3_1:+78612205 | Msa0377930:five_prime_UTR |
CTTCTCCGTCTTCAATTATT+AGG | 0.126880 | 3_1:+78612066 | Msa0377930:five_prime_UTR |
TCCCAGTCTTTCTCATTAAA+TGG | 0.189856 | 3_1:-78614121 | None:intergenic |
TGTTTCTGTTTGTTGAATTT+GGG | 0.192648 | 3_1:+78612206 | Msa0377930:five_prime_UTR |
TGAATTTGAACATTGATTTC+TGG | 0.198998 | 3_1:+78616573 | Msa0377930:three_prime_UTR |
GTATTTATAATAGGATTATT+TGG | 0.207819 | 3_1:-78611723 | None:intergenic |
TGTCATTTACTTCAGAAATA+TGG | 0.230925 | 3_1:-78614225 | None:intergenic |
TCCATACTGTGCACCATTCC+TGG | 0.233076 | 3_1:-78614095 | None:intergenic |
ATCTCATTTGGAATTAAATA+AGG | 0.245537 | 3_1:-78616169 | None:intergenic |
GTACCTTATATGACATAATT+TGG | 0.249762 | 3_1:+78616448 | Msa0377930:three_prime_UTR |
CAATCAGTTCGGTCTCCTTT+AGG | 0.274643 | 3_1:-78612779 | None:intergenic |
AGCTGTTTCTGTTTCTGTTT+GGG | 0.308393 | 3_1:+78612260 | Msa0377930:five_prime_UTR |
TGACATTGCTGTTGCGCTTA+AGG | 0.311635 | 3_1:+78612174 | Msa0377930:five_prime_UTR |
TTCTCCGTCTTCAATTATTA+GGG | 0.314791 | 3_1:+78612067 | Msa0377930:five_prime_UTR |
AAGCTGTTTCTGTTTCTGTT+TGG | 0.317698 | 3_1:+78612259 | Msa0377930:five_prime_UTR |
GGAAGGGTAGTATTTATAAT+AGG | 0.328380 | 3_1:-78611732 | None:intergenic |
CTGCCAAATTATGTCATATA+AGG | 0.338830 | 3_1:-78616451 | None:intergenic |
GCTTGATCACAGTTATTTGT+TGG | 0.357488 | 3_1:+78616630 | Msa0377930:three_prime_UTR |
GTGCAATATTTCTTTCCAAC+AGG | 0.361824 | 3_1:-78612629 | None:intergenic |
TCAAGCAACTCAAAGAAATC+AGG | 0.367048 | 3_1:-78616325 | None:intergenic |
TTTCTGTTTCTGTTTGGGTT+TGG | 0.370100 | 3_1:+78612265 | Msa0377930:five_prime_UTR |
GGGGTTGCTTCTCTCTCTTC+CGG | 0.374828 | 3_1:-78611666 | None:intergenic |
GGTGCAGACACAGCAGCAAC+AGG | 0.376155 | 3_1:-78614178 | None:intergenic |
GAAACAAAATTGATGATTCC+AGG | 0.377486 | 3_1:+78612314 | Msa0377930:CDS |
TGTTTAGTCTGCCAGGATAA+TGG | 0.379048 | 3_1:-78616358 | None:intergenic |
TGTTTAGTCTGCCAGGATAA+TGG | 0.379048 | 3_1:-78616417 | None:intergenic |
ACAATCGTCGCAGCAGGCTT+TGG | 0.383872 | 3_1:+78612011 | Msa0377930:five_prime_UTR |
CCCAGGAATGGTGCACAGTA+TGG | 0.387270 | 3_1:+78614094 | Msa0377930:CDS |
AGAACTCCTATGTGATTTGT+AGG | 0.387741 | 3_1:+78614047 | Msa0377930:intron |
AACCATTTAATGAGAAAGAC+TGG | 0.390374 | 3_1:+78614119 | Msa0377930:CDS |
AGTTCAGCAATGACATGAAA+AGG | 0.397881 | 3_1:-78612410 | None:intergenic |
CCCTCTGCAAGTGGATGTAT+TGG | 0.400344 | 3_1:+78614253 | Msa0377930:CDS |
ATTCATCAGTTTACATATGT+TGG | 0.409632 | 3_1:-78616602 | None:intergenic |
GCACGGGAGGGAGGATGAAT+CGG | 0.411671 | 3_1:+78612648 | Msa0377930:CDS |
TATTAACAGCTTGGTTGGAT+TGG | 0.414108 | 3_1:+78616210 | Msa0377930:CDS |
CCATACTGTGCACCATTCCT+GGG | 0.415740 | 3_1:-78614094 | None:intergenic |
GGAATATCTTCTTCCGCCAT+TGG | 0.422112 | 3_1:+78612032 | Msa0377930:five_prime_UTR |
ACATAAAATCGCCTCGTTCG+CGG | 0.439243 | 3_1:+78611784 | Msa0377930:five_prime_UTR |
GGAGATATTAACAGCTTGGT+TGG | 0.445872 | 3_1:+78616205 | Msa0377930:CDS |
TCCATCATGTTTAGTCTGCC+AGG | 0.448649 | 3_1:-78616424 | None:intergenic |
GGAAAATTGTTGCTTGGTGG+AGG | 0.453529 | 3_1:-78611687 | None:intergenic |
GACGATGAAAATGCATTGGC+CGG | 0.464243 | 3_1:+78614385 | Msa0377930:CDS |
ACCTAGAGGTGCCATTATCC+TGG | 0.465437 | 3_1:+78616347 | Msa0377930:CDS |
ACCTAGAGGTGCCATTATCC+TGG | 0.465437 | 3_1:+78616406 | Msa0377930:three_prime_UTR |
ATGAATCGGGCAACAGAAGT+AGG | 0.466475 | 3_1:+78612662 | Msa0377930:CDS |
CTAAAGGAGACCGAACTGAT+TGG | 0.467195 | 3_1:+78612780 | Msa0377930:CDS |
TGGTACTTCTTTACCCCTGT+TGG | 0.468244 | 3_1:+78612614 | Msa0377930:CDS |
GCCATCATGTTTAGTCTGCC+AGG | 0.468396 | 3_1:-78616365 | None:intergenic |
ATAAACGAAAAGCTATTTGC+TGG | 0.469573 | 3_1:+78616277 | Msa0377930:CDS |
AAAAGGAAGGTCCTGGTCCC+AGG | 0.470057 | 3_1:+78614077 | Msa0377930:CDS |
AAAATTGTTGCTTGGTGGAG+GGG | 0.475271 | 3_1:-78611685 | None:intergenic |
TAAAGGAGACCGAACTGATT+GGG | 0.479184 | 3_1:+78612781 | Msa0377930:CDS |
CACGGGAGGGAGGATGAATC+GGG | 0.479266 | 3_1:+78612649 | Msa0377930:CDS |
TGAAGAGAAAATGTTGAGAC+TGG | 0.482912 | 3_1:-78611982 | None:intergenic |
CTTTGAGTTGCTTGACCTAG+AGG | 0.489029 | 3_1:+78616333 | Msa0377930:CDS |
CGACAGAAGGTTGATAATCC+TGG | 0.495670 | 3_1:+78616121 | Msa0377930:intron |
ATGACACACCCTTCAGCTCT+AGG | 0.498439 | 3_1:+78614319 | Msa0377930:CDS |
TCAGCGTTGTTTGCTTGACC+AGG | 0.500954 | 3_1:-78616139 | None:intergenic |
CATTTACAAGTATGCTCCAT+GGG | 0.502977 | 3_1:+78612436 | Msa0377930:CDS |
CCGTTGTAAGACATTGTATG+TGG | 0.504987 | 3_1:+78616533 | Msa0377930:three_prime_UTR |
TCACCCCACTGATGTTGAGC+TGG | 0.506550 | 3_1:+78612346 | Msa0377930:CDS |
CTATCAAGATTGATGCCCTC+TGG | 0.507191 | 3_1:+78614295 | Msa0377930:CDS |
CACACTGGCAAAGCTCCTAA+AGG | 0.508822 | 3_1:+78612764 | Msa0377930:CDS |
GGGCAACAGAAGTAGGGTAC+TGG | 0.511584 | 3_1:+78612669 | Msa0377930:CDS |
GTAGGGTACTGGAAGACTAC+AGG | 0.511858 | 3_1:+78612680 | Msa0377930:CDS |
GGTGCTTTCTCATCCTTCTC+CGG | 0.514866 | 3_1:+78611805 | Msa0377930:five_prime_UTR |
GTTTCTGTTTGTTGAATTTG+GGG | 0.517264 | 3_1:+78612207 | Msa0377930:five_prime_UTR |
GCTTGATTGCCTAGAGCTGA+AGG | 0.517653 | 3_1:-78614328 | None:intergenic |
TGAATAACAATCGTCGCAGC+AGG | 0.518056 | 3_1:+78612005 | Msa0377930:five_prime_UTR |
CTTTGCCAGTGTGAAACACC+AGG | 0.519578 | 3_1:-78612754 | None:intergenic |
GTTCAGCAATGACATGAAAA+GGG | 0.521712 | 3_1:-78612409 | None:intergenic |
CCTGGGAGATATTAACAGCT+TGG | 0.523071 | 3_1:+78616201 | Msa0377930:CDS |
GTGGAACACCATTGTCAGCT+AGG | 0.523981 | 3_1:-78612835 | None:intergenic |
GATTTGTAGGGTATTTCAAA+AGG | 0.527496 | 3_1:+78614060 | Msa0377930:CDS |
GAGAGTGTATGAAGCACGGA+AGG | 0.527886 | 3_1:-78611749 | None:intergenic |
AGCTTGGTTGGATTGGATGA+TGG | 0.527918 | 3_1:+78616217 | Msa0377930:CDS |
TGTAGGGTATTTCAAAAGGA+AGG | 0.527921 | 3_1:+78614064 | Msa0377930:CDS |
GCTACAACGGATGGTGATGA+TGG | 0.530888 | 3_1:-78611956 | None:intergenic |
TCCAATACATCCACTTGCAG+AGG | 0.532823 | 3_1:-78614254 | None:intergenic |
TTTCGACGATGAAAATGCAT+TGG | 0.532966 | 3_1:+78614381 | Msa0377930:CDS |
ATCGTCGAAAATAGCAAGCA+TGG | 0.533664 | 3_1:-78614368 | None:intergenic |
AATGGAAAATTGTTGCTTGG+TGG | 0.535723 | 3_1:-78611690 | None:intergenic |
AAGAGGAAGCTTACCGGAGA+AGG | 0.538649 | 3_1:-78611818 | None:intergenic |
CATGCATAACCCAATCAGTT+CGG | 0.542397 | 3_1:-78612790 | None:intergenic |
CAAGCAACTCAAAGAAATCA+GGG | 0.542667 | 3_1:-78616324 | None:intergenic |
TCTTCCGGTGAGTGAGTAAG+AGG | 0.544744 | 3_1:-78611651 | None:intergenic |
AGCTGACAATGGTGTTCCAC+AGG | 0.546378 | 3_1:+78612838 | Msa0377930:CDS |
GAAAATTGTTGCTTGGTGGA+GGG | 0.547369 | 3_1:-78611686 | None:intergenic |
AGAAATATTGCACGGGAGGG+AGG | 0.549227 | 3_1:+78612639 | Msa0377930:CDS |
TCTTGATAGACATGATAAAG+AGG | 0.553266 | 3_1:-78614281 | None:intergenic |
TCCAAACCTGGTAGATCCCA+TGG | 0.553951 | 3_1:-78612452 | None:intergenic |
AAACAAAATTGATGATTCCA+GGG | 0.554783 | 3_1:+78612315 | Msa0377930:CDS |
GAACATAAGAATCAAGTGGT+GGG | 0.560868 | 3_1:+78612719 | Msa0377930:CDS |
TGCAATATTTCTTTCCAACA+GGG | 0.561122 | 3_1:-78612628 | None:intergenic |
GAAGGTCCTGGTCCCAGGAA+TGG | 0.561485 | 3_1:+78614082 | Msa0377930:CDS |
GACTGGAAAGCTACAACGGA+TGG | 0.563593 | 3_1:-78611965 | None:intergenic |
ACAAGAATTTACTCAAACAA+AGG | 0.564360 | 3_1:-78616658 | None:intergenic |
TCAGAAATATGGCTTGAGCT+AGG | 0.568979 | 3_1:-78614214 | None:intergenic |
GATAAATCTTTGCTCAAGAG+TGG | 0.570392 | 3_1:+78612581 | Msa0377930:intron |
GTTGGATTGGATGATGGAAG+CGG | 0.572350 | 3_1:+78616223 | Msa0377930:CDS |
GGAAGACTACAGGGAAGGAT+AGG | 0.572952 | 3_1:+78612690 | Msa0377930:CDS |
CTAATAATTGAAGACGGAGA+AGG | 0.573119 | 3_1:-78612065 | None:intergenic |
ACATTTACAAGTATGCTCCA+TGG | 0.574983 | 3_1:+78612435 | Msa0377930:CDS |
TCCTGGCAGACTAAACATGA+TGG | 0.576156 | 3_1:+78616423 | Msa0377930:three_prime_UTR |
ACGATGAAAATGCATTGGCC+GGG | 0.583391 | 3_1:+78614386 | Msa0377930:CDS |
GTATTTCAAAAGGAAGGTCC+TGG | 0.583445 | 3_1:+78614070 | Msa0377930:CDS |
GAACTCCTATGTGATTTGTA+GGG | 0.583857 | 3_1:+78614048 | Msa0377930:intron |
TCCACCTCTTACTCACTCAC+CGG | 0.586162 | 3_1:+78611647 | None:intergenic |
AACATAAGAATCAAGTGGTG+GGG | 0.590194 | 3_1:+78612720 | Msa0377930:CDS |
TTCTGAGTTACTTGACCTAG+AGG | 0.592289 | 3_1:+78616392 | Msa0377930:three_prime_UTR |
TGAATCGGGCAACAGAAGTA+GGG | 0.592463 | 3_1:+78612663 | Msa0377930:CDS |
GGTCAAGCAAACAACGCTGA+AGG | 0.593547 | 3_1:+78616142 | Msa0377930:CDS |
CAACAAACAGAAACAAACTC+TGG | 0.595937 | 3_1:-78612198 | None:intergenic |
ATTACCAGCTCAACATCAGT+GGG | 0.596276 | 3_1:-78612350 | None:intergenic |
ATGAGAAAGCACCGCGAACG+AGG | 0.596637 | 3_1:-78611795 | None:intergenic |
GGAAAGAAATATTGCACGGG+AGG | 0.596853 | 3_1:+78612635 | Msa0377930:CDS |
GACATGCATCCCTCTGCAAG+TGG | 0.596887 | 3_1:+78614244 | Msa0377930:CDS |
AGAACCCTGGTGTTTCACAC+TGG | 0.601634 | 3_1:+78612749 | Msa0377930:CDS |
GAGAGAGAGTGTATGAAGCA+CGG | 0.602258 | 3_1:-78611753 | None:intergenic |
GCCAGGATAATGGCACCTCT+AGG | 0.602723 | 3_1:-78616348 | None:intergenic |
GCCAGGATAATGGCACCTCT+AGG | 0.602723 | 3_1:-78616407 | None:intergenic |
TGTGCACCATTCCTGGGACC+AGG | 0.603992 | 3_1:-78614088 | None:intergenic |
GTGGGGTGAAAACGAAACCC+TGG | 0.604367 | 3_1:-78612332 | None:intergenic |
CATTACCAGCTCAACATCAG+TGG | 0.606060 | 3_1:-78612351 | None:intergenic |
AGCAACTCAAAGAAATCAGG+GGG | 0.608948 | 3_1:-78616322 | None:intergenic |
TCCGGTGAGTGAGTAAGAGG+TGG | 0.610007 | 3_1:-78611648 | None:intergenic |
TCCTGGCAGACTAAACATGA+TGG | 0.610442 | 3_1:+78616364 | Msa0377930:CDS |
CCAAGCTGTTAATATCTCCC+AGG | 0.614179 | 3_1:-78616201 | None:intergenic |
CTTGATTGCCTAGAGCTGAA+GGG | 0.615214 | 3_1:-78614327 | None:intergenic |
GAATGAAAACAATGGATCTG+AGG | 0.618267 | 3_1:+78614408 | Msa0377930:CDS |
GCAATATTTCTTTCCAACAG+GGG | 0.618582 | 3_1:-78612627 | None:intergenic |
CCAATACATCCACTTGCAGA+GGG | 0.625389 | 3_1:-78614253 | None:intergenic |
GAGCTAGGTAGAATGAGAGC+TGG | 0.627457 | 3_1:-78614199 | None:intergenic |
GTTGGAAAGAAATATTGCAC+GGG | 0.629534 | 3_1:+78612632 | Msa0377930:CDS |
TGAACATAAGAATCAAGTGG+TGG | 0.630537 | 3_1:+78612718 | Msa0377930:CDS |
TGAAGGGTGTGTCATGCCAG+AGG | 0.630682 | 3_1:-78614311 | None:intergenic |
TGTTGGAAAGAAATATTGCA+CGG | 0.632190 | 3_1:+78612631 | Msa0377930:CDS |
TTTCTGTTTGTTGAATTTGG+GGG | 0.633894 | 3_1:+78612208 | Msa0377930:five_prime_UTR |
ACCATTTAATGAGAAAGACT+GGG | 0.636505 | 3_1:+78614120 | Msa0377930:CDS |
GAAGGGTGTGTCATGCCAGA+GGG | 0.638957 | 3_1:-78614310 | None:intergenic |
AGAAGGAAGATCAAGTCCAA+TGG | 0.639679 | 3_1:-78612048 | None:intergenic |
TATGCTCCATGGGATCTACC+AGG | 0.645247 | 3_1:+78612446 | Msa0377930:CDS |
TAGGGTACTGGAAGACTACA+GGG | 0.648401 | 3_1:+78612681 | Msa0377930:CDS |
TTGGCCGGGAATGAAAACAA+TGG | 0.650090 | 3_1:+78614400 | Msa0377930:CDS |
ACAACCCTAATAATTGAAGA+CGG | 0.651257 | 3_1:-78612071 | None:intergenic |
GACAAAGACCTAGCTGACAA+TGG | 0.652509 | 3_1:+78612827 | Msa0377930:CDS |
AGAGTGTATGAAGCACGGAA+GGG | 0.653850 | 3_1:-78611748 | None:intergenic |
GTGCAGACACAGCAGCAACA+GGG | 0.657913 | 3_1:-78614177 | None:intergenic |
AAATACCCTACAAATCACAT+AGG | 0.659266 | 3_1:-78614053 | None:intergenic |
TCAAGAGTGGTGATTTGCAA+TGG | 0.660182 | 3_1:+78612594 | Msa0377930:CDS |
TTGAGACTGGAAAGCTACAA+CGG | 0.662420 | 3_1:-78611969 | None:intergenic |
CCACATACAATGTCTTACAA+CGG | 0.670248 | 3_1:-78616533 | None:intergenic |
AGGAAGATCAAGTCCAATGG+CGG | 0.670387 | 3_1:-78612045 | None:intergenic |
GTGATGATAAGAAAAGTCAT+CGG | 0.671182 | 3_1:-78611929 | None:intergenic |
GAAAGAAATATTGCACGGGA+GGG | 0.676449 | 3_1:+78612636 | Msa0377930:CDS |
GATTGAACATAAGAATCAAG+TGG | 0.676975 | 3_1:+78612715 | Msa0377930:CDS |
GTACTGGAAGACTACAGGGA+AGG | 0.680520 | 3_1:+78612685 | Msa0377930:CDS |
AAGCAACTCAAAGAAATCAG+GGG | 0.683918 | 3_1:-78616323 | None:intergenic |
AAGAAAAGTCATCGGCACAG+TGG | 0.690558 | 3_1:-78611921 | None:intergenic |
GAAAGACTGGGATAGCGAAG+AGG | 0.695888 | 3_1:+78614132 | Msa0377930:CDS |
TTTGCCAGTGTGAAACACCA+GGG | 0.703208 | 3_1:-78612753 | None:intergenic |
GGTGGGGATGATAAGAACCC+TGG | 0.707991 | 3_1:+78612736 | Msa0377930:CDS |
GCAACTCAAAGAAATCAGGG+GGG | 0.804791 | 3_1:-78616321 | None:intergenic |
TTACCAGCTCAACATCAGTG+GGG | 0.822926 | 3_1:-78612349 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATGTTAAAAATAAAAAAGA+GGG | - | chr3_1:78612109-78612128 | None:intergenic | 10.0% |
!! | AATTATTATTAGTATTAACA+AGG | + | chr3_1:78613336-78613355 | Msa0377930:intron | 10.0% |
!! | ATTATTATTAGTATTAACAA+GGG | + | chr3_1:78613337-78613356 | Msa0377930:intron | 10.0% |
!! | TTATTATTAGTATTAATAAG+GGG | + | chr3_1:78613373-78613392 | Msa0377930:intron | 10.0% |
!! | AAAAAAAATAAAAAAAGTTG+AGG | - | chr3_1:78614546-78614565 | None:intergenic | 10.0% |
!!! | ATATTTTTGTTAAAAAAGAT+TGG | + | chr3_1:78615464-78615483 | Msa0377930:intron | 10.0% |
!!! | TATTTTTGTTAAAAAAGATT+GGG | + | chr3_1:78615465-78615484 | Msa0377930:intron | 10.0% |
!! | TTATTTGGAAAAAAGAAAAA+TGG | - | chr3_1:78611711-78611730 | None:intergenic | 15.0% |
!! | GTATTTATAATAGGATTATT+TGG | - | chr3_1:78611726-78611745 | None:intergenic | 15.0% |
!! | CAATGTTAAAAATAAAAAAG+AGG | - | chr3_1:78612110-78612129 | None:intergenic | 15.0% |
!! | ATAACTAAAAAACAAAAACT+AGG | - | chr3_1:78612148-78612167 | None:intergenic | 15.0% |
!!! | ACTAATAATAATTTGTCTTA+GGG | - | chr3_1:78613329-78613348 | None:intergenic | 15.0% |
!!! | TACTAATAATAATTTGTCTT+AGG | - | chr3_1:78613330-78613349 | None:intergenic | 15.0% |
!! | TTATTATTAGTATTAACAAG+GGG | + | chr3_1:78613338-78613357 | Msa0377930:intron | 15.0% |
!!! | ACTAATAATAATTTGTCTTA+GGG | - | chr3_1:78613329-78613348 | None:intergenic | 15.0% |
!!! | TACTAATAATAATTTGTCTT+AGG | - | chr3_1:78613330-78613349 | None:intergenic | 15.0% |
!! | TTGAAATAAGACTTATATTT+AGG | + | chr3_1:78613431-78613450 | Msa0377930:intron | 15.0% |
!!! | ATTTCTCTTATTTGTTTTTT+TGG | + | chr3_1:78613590-78613609 | Msa0377930:intron | 15.0% |
!!! | ATTTTTGTTAAAAAAGATTG+GGG | + | chr3_1:78615466-78615485 | Msa0377930:intron | 15.0% |
!!! | TTATAGTATTTTCATCTTTT+TGG | - | chr3_1:78616261-78616280 | None:intergenic | 15.0% |
!!! | AATTTGATAATGCAATGTTA+GGG | + | chr3_1:78611896-78611915 | Msa0377930:intron | 20.0% |
!!! | TTTTCTTTTTGATTTTTCGA+TGG | + | chr3_1:78612289-78612308 | Msa0377930:exon | 20.0% |
!! | ATATGTCAATAATCAAAAAC+TGG | - | chr3_1:78613004-78613023 | None:intergenic | 20.0% |
!!! | TATTTGTTTTTTTGGAAACT+TGG | + | chr3_1:78613598-78613617 | Msa0377930:intron | 20.0% |
!! | TCAAAGATAACTAAAAAAAG+AGG | - | chr3_1:78614598-78614617 | None:intergenic | 20.0% |
!! | AGCAAAAAAAAATGAGAAAT+CGG | + | chr3_1:78614796-78614815 | Msa0377930:intron | 20.0% |
!! | TACTTTCTACACATATTTAT+AGG | - | chr3_1:78614861-78614880 | None:intergenic | 20.0% |
!!! | TATTGTATTCTGCATTTTTT+GGG | + | chr3_1:78615340-78615359 | Msa0377930:intron | 20.0% |
!!! | TTTTTGTTAAAAAAGATTGG+GGG | + | chr3_1:78615467-78615486 | Msa0377930:intron | 20.0% |
!! | ATGAAAGTTTGTAAATTAGT+TGG | + | chr3_1:78615759-78615778 | Msa0377930:intron | 20.0% |
!!! | TGCTTCTTAATTTATTTCTT+TGG | - | chr3_1:78615793-78615812 | None:intergenic | 20.0% |
!! | AAAGAAATAAATTAAGAAGC+AGG | + | chr3_1:78615792-78615811 | Msa0377930:intron | 20.0% |
!!! | ATCTCATTTGGAATTAAATA+AGG | - | chr3_1:78616172-78616191 | None:intergenic | 20.0% |
! | AAAAATGGAAAATTGTTGCT+TGG | - | chr3_1:78611696-78611715 | None:intergenic | 25.0% |
!!! | GAATTTGATAATGCAATGTT+AGG | + | chr3_1:78611895-78611914 | Msa0377930:intron | 25.0% |
!!! | TTGTTTCTGTTTGTTGAATT+TGG | + | chr3_1:78612205-78612224 | Msa0377930:five_prime_UTR | 25.0% |
!! | TGTTTCTGTTTGTTGAATTT+GGG | + | chr3_1:78612206-78612225 | Msa0377930:five_prime_UTR | 25.0% |
!!! | TGGAATCATCAATTTTGTTT+CGG | - | chr3_1:78612315-78612334 | None:intergenic | 25.0% |
!! | AAACAAAATTGATGATTCCA+GGG | + | chr3_1:78612315-78612334 | Msa0377930:CDS | 25.0% |
!!! | CAAAAGTATTCTCTCAAAAA+AGG | + | chr3_1:78613789-78613808 | Msa0377930:intron | 25.0% |
!! | TGTCATTTACTTCAGAAATA+TGG | - | chr3_1:78614228-78614247 | None:intergenic | 25.0% |
! | TTATATAAAACATCACACTC+TGG | + | chr3_1:78614640-78614659 | Msa0377930:intron | 25.0% |
!!! | TTCTCATTTTTTTTTGCTAC+AGG | - | chr3_1:78614794-78614813 | None:intergenic | 25.0% |
! | GTACAAAATTCTTATGCATT+AGG | + | chr3_1:78614992-78615011 | Msa0377930:intron | 25.0% |
!!! | TTTTTTTTACGCCCTATTTT+TGG | + | chr3_1:78615130-78615149 | Msa0377930:intron | 25.0% |
! | TTACAAAGATAACAAAGAGA+AGG | - | chr3_1:78615164-78615183 | None:intergenic | 25.0% |
!!! | GTATTGTATTCTGCATTTTT+TGG | + | chr3_1:78615339-78615358 | Msa0377930:intron | 25.0% |
!!! | TGCATTTTTTGGGTATATTT+TGG | + | chr3_1:78615350-78615369 | Msa0377930:intron | 25.0% |
! | AAACTTTCATTTGCACAAAA+GGG | - | chr3_1:78615749-78615768 | None:intergenic | 25.0% |
!!! | TTTTTAATGGTTAGTCAAAG+GGG | - | chr3_1:78615906-78615925 | None:intergenic | 25.0% |
!!! | GTTTTTAATGGTTAGTCAAA+GGG | - | chr3_1:78615907-78615926 | None:intergenic | 25.0% |
!!! | AGTTTTTAATGGTTAGTCAA+AGG | - | chr3_1:78615908-78615927 | None:intergenic | 25.0% |
! | TTTGACTAACCATTAAAAAC+TGG | + | chr3_1:78615907-78615926 | Msa0377930:intron | 25.0% |
!! | AATTCCAAATGAGATTTTTG+AGG | + | chr3_1:78616177-78616196 | Msa0377930:CDS | 25.0% |
! | GTACCTTATATGACATAATT+TGG | + | chr3_1:78616448-78616467 | Msa0377930:three_prime_UTR | 25.0% |
!! | TAGTTTTCTCTAGTCATATA+AGG | - | chr3_1:78616494-78616513 | None:intergenic | 25.0% |
!!! | TGAATTTGAACATTGATTTC+TGG | + | chr3_1:78616573-78616592 | Msa0377930:three_prime_UTR | 25.0% |
! | ATTCATCAGTTTACATATGT+TGG | - | chr3_1:78616605-78616624 | None:intergenic | 25.0% |
GGAAGGGTAGTATTTATAAT+AGG | - | chr3_1:78611735-78611754 | None:intergenic | 30.0% | |
ATTTCATATTCTGAGCGATT+GGG | - | chr3_1:78611874-78611893 | None:intergenic | 30.0% | |
AATTTCATATTCTGAGCGAT+TGG | - | chr3_1:78611875-78611894 | None:intergenic | 30.0% | |
GTGATGATAAGAAAAGTCAT+CGG | - | chr3_1:78611932-78611951 | None:intergenic | 30.0% | |
! | GATGACTTTTCTTATCATCA+CGG | + | chr3_1:78611931-78611950 | Msa0377930:five_prime_UTR | 30.0% |
TTCTCCGTCTTCAATTATTA+GGG | + | chr3_1:78612067-78612086 | Msa0377930:five_prime_UTR | 30.0% | |
ACAACCCTAATAATTGAAGA+CGG | - | chr3_1:78612074-78612093 | None:intergenic | 30.0% | |
! | GTTTCTGTTTGTTGAATTTG+GGG | + | chr3_1:78612207-78612226 | Msa0377930:five_prime_UTR | 30.0% |
! | TTTCTGTTTGTTGAATTTGG+GGG | + | chr3_1:78612208-78612227 | Msa0377930:five_prime_UTR | 30.0% |
! | GAAACAAAATTGATGATTCC+AGG | + | chr3_1:78612314-78612333 | Msa0377930:CDS | 30.0% |
!! | TGGTAATGTATTTTCTCAAG+AGG | + | chr3_1:78612366-78612385 | Msa0377930:CDS | 30.0% |
! | TTTTCTCAAGAGGAAGATTT+TGG | + | chr3_1:78612376-78612395 | Msa0377930:CDS | 30.0% |
! | TTTCTCAAGAGGAAGATTTT+GGG | + | chr3_1:78612377-78612396 | Msa0377930:CDS | 30.0% |
!! | GTTTTAAGCTTTTTGTCTGT+CGG | + | chr3_1:78612493-78612512 | Msa0377930:intron | 30.0% |
TGCAATATTTCTTTCCAACA+GGG | - | chr3_1:78612631-78612650 | None:intergenic | 30.0% | |
TGTTGGAAAGAAATATTGCA+CGG | + | chr3_1:78612631-78612650 | Msa0377930:CDS | 30.0% | |
GATTGAACATAAGAATCAAG+TGG | + | chr3_1:78612715-78612734 | Msa0377930:CDS | 30.0% | |
GAGGAATTATGTTTACCAAT+TGG | + | chr3_1:78612877-78612896 | Msa0377930:intron | 30.0% | |
! | CCAACAAAAGCTGTAATTTT+AGG | - | chr3_1:78613034-78613053 | None:intergenic | 30.0% |
! | CCTAAAATTACAGCTTTTGT+TGG | + | chr3_1:78613031-78613050 | Msa0377930:intron | 30.0% |
GAGTTTAACATGAAAACACA+TGG | - | chr3_1:78613076-78613095 | None:intergenic | 30.0% | |
GACAAAGCTGTTTATATCAA+AGG | - | chr3_1:78613192-78613211 | None:intergenic | 30.0% | |
TAATGTATCCATTGTGTGTA+TGG | + | chr3_1:78613248-78613267 | Msa0377930:intron | 30.0% | |
!!! | TAGGAACAATTTTTTCCCAA+AGG | + | chr3_1:78613450-78613469 | Msa0377930:intron | 30.0% |
! | CTTTGAAAAAAATGGAAGGA+TGG | + | chr3_1:78613520-78613539 | Msa0377930:intron | 30.0% |
!!! | TTTTTTGGAAACTTGGTATC+CGG | + | chr3_1:78613605-78613624 | Msa0377930:intron | 30.0% |
!!! | ATTGTATTGGAGGAGTATTT+TGG | + | chr3_1:78613670-78613689 | Msa0377930:intron | 30.0% |
ACTTGGTATATTCTTAGTCT+GGG | + | chr3_1:78613944-78613963 | Msa0377930:intron | 30.0% | |
!!! | TTTTTTTCTGATTGTTCTCC+TGG | + | chr3_1:78613987-78614006 | Msa0377930:intron | 30.0% |
AGAACAGTTAAGATAAAACC+AGG | - | chr3_1:78614008-78614027 | None:intergenic | 30.0% | |
AAATACCCTACAAATCACAT+AGG | - | chr3_1:78614056-78614075 | None:intergenic | 30.0% | |
! | GATTTGTAGGGTATTTCAAA+AGG | + | chr3_1:78614060-78614079 | Msa0377930:CDS | 30.0% |
AACCATTTAATGAGAAAGAC+TGG | + | chr3_1:78614119-78614138 | Msa0377930:CDS | 30.0% | |
ACCATTTAATGAGAAAGACT+GGG | + | chr3_1:78614120-78614139 | Msa0377930:CDS | 30.0% | |
TCTTGATAGACATGATAAAG+AGG | - | chr3_1:78614284-78614303 | None:intergenic | 30.0% | |
CACATATTTATAGGTCATGT+GGG | - | chr3_1:78614852-78614871 | None:intergenic | 30.0% | |
ACACATATTTATAGGTCATG+TGG | - | chr3_1:78614853-78614872 | None:intergenic | 30.0% | |
! | ATGTATCACGTGTTATTAGA+AGG | + | chr3_1:78615052-78615071 | Msa0377930:intron | 30.0% |
CTTTCTATCAGTTTGATCAT+TGG | + | chr3_1:78615284-78615303 | Msa0377930:intron | 30.0% | |
ATAGGAAACTAAGACAAAAG+AGG | - | chr3_1:78615403-78615422 | None:intergenic | 30.0% | |
ACAAATGTCCAATGTTCTAA+TGG | - | chr3_1:78615434-78615453 | None:intergenic | 30.0% | |
TAGTCTAACATTCATTACCT+AGG | - | chr3_1:78615597-78615616 | None:intergenic | 30.0% | |
AACTTTCATTTGCACAAAAG+GGG | - | chr3_1:78615748-78615767 | None:intergenic | 30.0% | |
CAAACTTTCATTTGCACAAA+AGG | - | chr3_1:78615750-78615769 | None:intergenic | 30.0% | |
AACAAAAGAGACAGTAAGAT+TGG | - | chr3_1:78615832-78615851 | None:intergenic | 30.0% | |
!! | TCTTACTGTCTCTTTTGTTT+AGG | + | chr3_1:78615833-78615852 | Msa0377930:intron | 30.0% |
!! | CTTACTGTCTCTTTTGTTTA+GGG | + | chr3_1:78615834-78615853 | Msa0377930:intron | 30.0% |
ACTAACCATTAAAAACTGGA+AGG | + | chr3_1:78615911-78615930 | Msa0377930:intron | 30.0% | |
TTTGATCCTACTAATCAAGA+TGG | + | chr3_1:78615952-78615971 | Msa0377930:intron | 30.0% | |
!! | ATTTTCATCTTTTTGGCCAT+AGG | - | chr3_1:78616254-78616273 | None:intergenic | 30.0% |
ATAAACGAAAAGCTATTTGC+TGG | + | chr3_1:78616277-78616296 | Msa0377930:CDS | 30.0% | |
CTGCCAAATTATGTCATATA+AGG | - | chr3_1:78616454-78616473 | None:intergenic | 30.0% | |
! | AATGGAAAATTGTTGCTTGG+TGG | - | chr3_1:78611693-78611712 | None:intergenic | 35.0% |
GATGAGAATGAATGAAGAAG+AGG | - | chr3_1:78611838-78611857 | None:intergenic | 35.0% | |
TTTCATATTCTGAGCGATTG+GGG | - | chr3_1:78611873-78611892 | None:intergenic | 35.0% | |
TGAAGAGAAAATGTTGAGAC+TGG | - | chr3_1:78611985-78612004 | None:intergenic | 35.0% | |
CTAATAATTGAAGACGGAGA+AGG | - | chr3_1:78612068-78612087 | None:intergenic | 35.0% | |
CTTCTCCGTCTTCAATTATT+AGG | + | chr3_1:78612066-78612085 | Msa0377930:five_prime_UTR | 35.0% | |
CAACAAACAGAAACAAACTC+TGG | - | chr3_1:78612201-78612220 | None:intergenic | 35.0% | |
!! | AAGCTGTTTCTGTTTCTGTT+TGG | + | chr3_1:78612259-78612278 | Msa0377930:five_prime_UTR | 35.0% |
!! | AGCTGTTTCTGTTTCTGTTT+GGG | + | chr3_1:78612260-78612279 | Msa0377930:five_prime_UTR | 35.0% |
!! | TTTCTGTTTCTGTTTGGGTT+TGG | + | chr3_1:78612265-78612284 | Msa0377930:five_prime_UTR | 35.0% |
GTTCAGCAATGACATGAAAA+GGG | - | chr3_1:78612412-78612431 | None:intergenic | 35.0% | |
AGTTCAGCAATGACATGAAA+AGG | - | chr3_1:78612413-78612432 | None:intergenic | 35.0% | |
ACATTTACAAGTATGCTCCA+TGG | + | chr3_1:78612435-78612454 | Msa0377930:CDS | 35.0% | |
CATTTACAAGTATGCTCCAT+GGG | + | chr3_1:78612436-78612455 | Msa0377930:CDS | 35.0% | |
GATAAATCTTTGCTCAAGAG+TGG | + | chr3_1:78612581-78612600 | Msa0377930:intron | 35.0% | |
GCAATATTTCTTTCCAACAG+GGG | - | chr3_1:78612630-78612649 | None:intergenic | 35.0% | |
GTGCAATATTTCTTTCCAAC+AGG | - | chr3_1:78612632-78612651 | None:intergenic | 35.0% | |
GTTGGAAAGAAATATTGCAC+GGG | + | chr3_1:78612632-78612651 | Msa0377930:CDS | 35.0% | |
TGAACATAAGAATCAAGTGG+TGG | + | chr3_1:78612718-78612737 | Msa0377930:CDS | 35.0% | |
GAACATAAGAATCAAGTGGT+GGG | + | chr3_1:78612719-78612738 | Msa0377930:CDS | 35.0% | |
AACATAAGAATCAAGTGGTG+GGG | + | chr3_1:78612720-78612739 | Msa0377930:CDS | 35.0% | |
ATTCAAAGATGTCATACCTG+TGG | - | chr3_1:78612857-78612876 | None:intergenic | 35.0% | |
AGGTATGACATCTTTGAATG+AGG | + | chr3_1:78612858-78612877 | Msa0377930:intron | 35.0% | |
!! | TGTTTTGTTGGATGTACGTA+TGG | + | chr3_1:78612908-78612927 | Msa0377930:intron | 35.0% |
CTCAAGCTGTAAATGATTCA+TGG | + | chr3_1:78613093-78613112 | Msa0377930:intron | 35.0% | |
AGTAACATCCATACACACAA+TGG | - | chr3_1:78613259-78613278 | None:intergenic | 35.0% | |
!!! | ATTTTTTCCCAAAGGTCTGT+TGG | + | chr3_1:78613458-78613477 | Msa0377930:intron | 35.0% |
!!! | TTTTTTCCCAAAGGTCTGTT+GGG | + | chr3_1:78613459-78613478 | Msa0377930:intron | 35.0% |
!! | AGGGCTTTGAAAAAAATGGA+AGG | + | chr3_1:78613516-78613535 | Msa0377930:intron | 35.0% |
AAAAAAATGGAAGGATGGAG+TGG | + | chr3_1:78613525-78613544 | Msa0377930:intron | 35.0% | |
AACTAAACCCCTCCTAATTT+GGG | + | chr3_1:78613638-78613657 | Msa0377930:intron | 35.0% | |
! | AATTTGAGTTCCCCCAAATT+AGG | - | chr3_1:78613653-78613672 | None:intergenic | 35.0% |
!!! | TATTGGAGGAGTATTTTGGA+GGG | + | chr3_1:78613674-78613693 | Msa0377930:intron | 35.0% |
CCTAATACAAGTCCTCTTTA+GGG | - | chr3_1:78613886-78613905 | None:intergenic | 35.0% | |
CCTAAAGAGGACTTGTATTA+GGG | + | chr3_1:78613884-78613903 | Msa0377930:intron | 35.0% | |
!!! | TTGACTGTTTTAGCATGACT+TGG | + | chr3_1:78613927-78613946 | Msa0377930:intron | 35.0% |
! | GACTTGGTATATTCTTAGTC+TGG | + | chr3_1:78613943-78613962 | Msa0377930:intron | 35.0% |
! | AGAACTCCTATGTGATTTGT+AGG | + | chr3_1:78614047-78614066 | Msa0377930:intron | 35.0% |
! | GAACTCCTATGTGATTTGTA+GGG | + | chr3_1:78614048-78614067 | Msa0377930:intron | 35.0% |
! | TGTAGGGTATTTCAAAAGGA+AGG | + | chr3_1:78614064-78614083 | Msa0377930:CDS | 35.0% |
TCCCAGTCTTTCTCATTAAA+TGG | - | chr3_1:78614124-78614143 | None:intergenic | 35.0% | |
TTTCGACGATGAAAATGCAT+TGG | + | chr3_1:78614381-78614400 | Msa0377930:CDS | 35.0% | |
! | AGATCCATTGTTTTCATTCC+CGG | - | chr3_1:78614407-78614426 | None:intergenic | 35.0% |
GAATGAAAACAATGGATCTG+AGG | + | chr3_1:78614408-78614427 | Msa0377930:CDS | 35.0% | |
! | GCACTTTTAGTGTTATGCAA+GGG | + | chr3_1:78614703-78614722 | Msa0377930:intron | 35.0% |
! | TTATAGGTCATGTGGGTTTT+GGG | - | chr3_1:78614845-78614864 | None:intergenic | 35.0% |
! | TTTATAGGTCATGTGGGTTT+TGG | - | chr3_1:78614846-78614865 | None:intergenic | 35.0% |
ATATGACTACCTCCAATATC+TGG | + | chr3_1:78615080-78615099 | Msa0377930:intron | 35.0% | |
AAATGACTGTTCACCAGAAA+TGG | - | chr3_1:78615113-78615132 | None:intergenic | 35.0% | |
AAGATAACAAAGAGAAGGAG+AGG | - | chr3_1:78615159-78615178 | None:intergenic | 35.0% | |
TGCTATCTTTCATTTGCTCT+CGG | + | chr3_1:78615195-78615214 | Msa0377930:intron | 35.0% | |
AGTCTTAACAGTAGCATAAG+TGG | - | chr3_1:78615250-78615269 | None:intergenic | 35.0% | |
!! | TCATTGGTCTTAACATATGC+TGG | + | chr3_1:78615300-78615319 | Msa0377930:intron | 35.0% |
TGCAAGTGCAATTAATCAGA+AGG | - | chr3_1:78615527-78615546 | None:intergenic | 35.0% | |
TTAAATGTTCTACATGGCCT+AGG | + | chr3_1:78615577-78615596 | Msa0377930:intron | 35.0% | |
TGTCTGCTTCGTTGTTATAT+TGG | + | chr3_1:78615689-78615708 | Msa0377930:intron | 35.0% | |
CTTCGTTGTTATATTGGACT+TGG | + | chr3_1:78615695-78615714 | Msa0377930:intron | 35.0% | |
! | TTCAGCCTTCCAGTTTTTAA+TGG | - | chr3_1:78615919-78615938 | None:intergenic | 35.0% |
ATGTGATTATGTTCGACAGA+AGG | + | chr3_1:78616108-78616127 | Msa0377930:intron | 35.0% | |
AGGTCCTCAAAAATCTCATT+TGG | - | chr3_1:78616184-78616203 | None:intergenic | 35.0% | |
!! | AAATGAGATTTTTGAGGACC+TGG | + | chr3_1:78616183-78616202 | Msa0377930:CDS | 35.0% |
!! | AATGAGATTTTTGAGGACCT+GGG | + | chr3_1:78616184-78616203 | Msa0377930:CDS | 35.0% |
TATTAACAGCTTGGTTGGAT+TGG | + | chr3_1:78616210-78616229 | Msa0377930:CDS | 35.0% | |
AAGCAACTCAAAGAAATCAG+GGG | - | chr3_1:78616326-78616345 | None:intergenic | 35.0% | |
CAAGCAACTCAAAGAAATCA+GGG | - | chr3_1:78616327-78616346 | None:intergenic | 35.0% | |
TCAAGCAACTCAAAGAAATC+AGG | - | chr3_1:78616328-78616347 | None:intergenic | 35.0% | |
CCACATACAATGTCTTACAA+CGG | - | chr3_1:78616536-78616555 | None:intergenic | 35.0% | |
GCTTGATCACAGTTATTTGT+TGG | + | chr3_1:78616630-78616649 | Msa0377930:three_prime_UTR | 35.0% | |
! | AAAATTGTTGCTTGGTGGAG+GGG | - | chr3_1:78611688-78611707 | None:intergenic | 40.0% |
! | GAAAATTGTTGCTTGGTGGA+GGG | - | chr3_1:78611689-78611708 | None:intergenic | 40.0% |
ATGAAGAAGAGGAAGCTTAC+CGG | - | chr3_1:78611827-78611846 | None:intergenic | 40.0% | |
TTGAGACTGGAAAGCTACAA+CGG | - | chr3_1:78611972-78611991 | None:intergenic | 40.0% | |
AGAAGGAAGATCAAGTCCAA+TGG | - | chr3_1:78612051-78612070 | None:intergenic | 40.0% | |
! | GTTTGTTGAATTTGGGGGTT+TGG | + | chr3_1:78612213-78612232 | Msa0377930:five_prime_UTR | 40.0% |
! | TTTGGGGGTTTGGTAGTTTA+AGG | + | chr3_1:78612223-78612242 | Msa0377930:five_prime_UTR | 40.0% |
ATTACCAGCTCAACATCAGT+GGG | - | chr3_1:78612353-78612372 | None:intergenic | 40.0% | |
AGTTTCGTTGAATCCAAACC+TGG | - | chr3_1:78612467-78612486 | None:intergenic | 40.0% | |
! | TCAAGAGTGGTGATTTGCAA+TGG | + | chr3_1:78612594-78612613 | Msa0377930:CDS | 40.0% |
GAAAGAAATATTGCACGGGA+GGG | + | chr3_1:78612636-78612655 | Msa0377930:CDS | 40.0% | |
TAAAGGAGACCGAACTGATT+GGG | + | chr3_1:78612781-78612800 | Msa0377930:CDS | 40.0% | |
CATGCATAACCCAATCAGTT+CGG | - | chr3_1:78612793-78612812 | None:intergenic | 40.0% | |
CAAAACAGTTCGCAACCAAT+TGG | - | chr3_1:78612895-78612914 | None:intergenic | 40.0% | |
! | TTGGTTGCGAACTGTTTTGT+TGG | + | chr3_1:78612896-78612915 | Msa0377930:intron | 40.0% |
GATGTACGTATGGCGTTTAA+TGG | + | chr3_1:78612918-78612937 | Msa0377930:intron | 40.0% | |
TGGCTTTCACGTGTAACAAA+GGG | - | chr3_1:78612984-78613003 | None:intergenic | 40.0% | |
GGACAGTGAGAGTAATAAGA+TGG | - | chr3_1:78613171-78613190 | None:intergenic | 40.0% | |
! | TTTTTCCCAAAGGTCTGTTG+GGG | + | chr3_1:78613460-78613479 | Msa0377930:intron | 40.0% |
!! | GGAGAGGGCTTTGAAAAAAA+TGG | + | chr3_1:78613512-78613531 | Msa0377930:intron | 40.0% |
! | AAGGAATGAAGAGGTTTGGT+AGG | + | chr3_1:78613548-78613567 | Msa0377930:intron | 40.0% |
! | AGGAATGAAGAGGTTTGGTA+GGG | + | chr3_1:78613549-78613568 | Msa0377930:intron | 40.0% |
CAAATTAGGAGGGGTTTAGT+TGG | - | chr3_1:78613639-78613658 | None:intergenic | 40.0% | |
CAACTAAACCCCTCCTAATT+TGG | + | chr3_1:78613637-78613656 | Msa0377930:intron | 40.0% | |
ACTAAACCCCTCCTAATTTG+GGG | + | chr3_1:78613639-78613658 | Msa0377930:intron | 40.0% | |
TGGGGGAACTCAAATTGTAT+TGG | + | chr3_1:78613657-78613676 | Msa0377930:intron | 40.0% | |
GGGAACTCAAATTGTATTGG+AGG | + | chr3_1:78613660-78613679 | Msa0377930:intron | 40.0% | |
!!! | GTATTGGAGGAGTATTTTGG+AGG | + | chr3_1:78613673-78613692 | Msa0377930:intron | 40.0% |
!!! | AGGAGTATTTTGGAGGGTTT+TGG | + | chr3_1:78613680-78613699 | Msa0377930:intron | 40.0% |
CCCTAAAGAGGACTTGTATT+AGG | + | chr3_1:78613883-78613902 | Msa0377930:intron | 40.0% | |
CCCTAATACAAGTCCTCTTT+AGG | - | chr3_1:78613887-78613906 | None:intergenic | 40.0% | |
GTATTTCAAAAGGAAGGTCC+TGG | + | chr3_1:78614070-78614089 | Msa0377930:CDS | 40.0% | |
TCAGAAATATGGCTTGAGCT+AGG | - | chr3_1:78614217-78614236 | None:intergenic | 40.0% | |
ATCGTCGAAAATAGCAAGCA+TGG | - | chr3_1:78614371-78614390 | None:intergenic | 40.0% | |
AAGTCAGAGCTACCAAAGTT+GGG | - | chr3_1:78614491-78614510 | None:intergenic | 40.0% | |
AAAGTCAGAGCTACCAAAGT+TGG | - | chr3_1:78614492-78614511 | None:intergenic | 40.0% | |
AAAAAGAGGAACAGTTCACG+AGG | - | chr3_1:78614584-78614603 | None:intergenic | 40.0% | |
TGCTGAATTGCATGACACAT+TGG | + | chr3_1:78614681-78614700 | Msa0377930:intron | 40.0% | |
! | GGCACTTTTAGTGTTATGCA+AGG | + | chr3_1:78614702-78614721 | Msa0377930:intron | 40.0% |
ACCAATCTCATCACCAACAA+TGG | + | chr3_1:78614751-78614770 | Msa0377930:intron | 40.0% | |
AATGGAAGCTTGCCAGATAT+TGG | - | chr3_1:78615095-78615114 | None:intergenic | 40.0% | |
AGGAGAGGTTGCCAAAAATA+GGG | - | chr3_1:78615144-78615163 | None:intergenic | 40.0% | |
AAGGAGAGGTTGCCAAAAAT+AGG | - | chr3_1:78615145-78615164 | None:intergenic | 40.0% | |
GAGAGCAAATGAAAGATAGC+AGG | - | chr3_1:78615196-78615215 | None:intergenic | 40.0% | |
GGAAACTAAGACAAAAGAGG+TGG | - | chr3_1:78615400-78615419 | None:intergenic | 40.0% | |
TCCAATGTTCTAATGGCAGA+TGG | - | chr3_1:78615427-78615446 | None:intergenic | 40.0% | |
ACTCACTCCAAAGTGATTAG+TGG | + | chr3_1:78615551-78615570 | Msa0377930:intron | 40.0% | |
CTCACTCCAAAGTGATTAGT+GGG | + | chr3_1:78615552-78615571 | Msa0377930:intron | 40.0% | |
TCACTCCAAAGTGATTAGTG+GGG | + | chr3_1:78615553-78615572 | Msa0377930:intron | 40.0% | |
TTAAGCCCCACTAATCACTT+TGG | - | chr3_1:78615561-78615580 | None:intergenic | 40.0% | |
TGGGGCTTAAATGTTCTACA+TGG | + | chr3_1:78615571-78615590 | Msa0377930:intron | 40.0% | |
CGTTGTTATATTGGACTTGG+TGG | + | chr3_1:78615698-78615717 | Msa0377930:intron | 40.0% | |
!! | ACTGTCTCTTTTGTTTAGGG+AGG | + | chr3_1:78615837-78615856 | Msa0377930:intron | 40.0% |
!! | CTGTCTCTTTTGTTTAGGGA+GGG | + | chr3_1:78615838-78615857 | Msa0377930:intron | 40.0% |
GGAGATATTAACAGCTTGGT+TGG | + | chr3_1:78616205-78616224 | Msa0377930:CDS | 40.0% | |
AGCAACTCAAAGAAATCAGG+GGG | - | chr3_1:78616325-78616344 | None:intergenic | 40.0% | |
TGTTTAGTCTGCCAGGATAA+TGG | - | chr3_1:78616361-78616380 | None:intergenic | 40.0% | |
TTCTGAGTTACTTGACCTAG+AGG | + | chr3_1:78616392-78616411 | Msa0377930:three_prime_UTR | 40.0% | |
TGTTTAGTCTGCCAGGATAA+TGG | - | chr3_1:78616361-78616380 | None:intergenic | 40.0% | |
CCGTTGTAAGACATTGTATG+TGG | + | chr3_1:78616533-78616552 | Msa0377930:three_prime_UTR | 40.0% | |
! | GGAAAATTGTTGCTTGGTGG+AGG | - | chr3_1:78611690-78611709 | None:intergenic | 45.0% |
AGAGTGTATGAAGCACGGAA+GGG | - | chr3_1:78611751-78611770 | None:intergenic | 45.0% | |
! | GAGAGAGAGTGTATGAAGCA+CGG | - | chr3_1:78611756-78611775 | None:intergenic | 45.0% |
ACATAAAATCGCCTCGTTCG+CGG | + | chr3_1:78611784-78611803 | Msa0377930:five_prime_UTR | 45.0% | |
AAGAAAAGTCATCGGCACAG+TGG | - | chr3_1:78611924-78611943 | None:intergenic | 45.0% | |
TGAATAACAATCGTCGCAGC+AGG | + | chr3_1:78612005-78612024 | Msa0377930:five_prime_UTR | 45.0% | |
GGAATATCTTCTTCCGCCAT+TGG | + | chr3_1:78612032-78612051 | Msa0377930:five_prime_UTR | 45.0% | |
AGGAAGATCAAGTCCAATGG+CGG | - | chr3_1:78612048-78612067 | None:intergenic | 45.0% | |
! | TGACATTGCTGTTGCGCTTA+AGG | + | chr3_1:78612174-78612193 | Msa0377930:five_prime_UTR | 45.0% |
TTACCAGCTCAACATCAGTG+GGG | - | chr3_1:78612352-78612371 | None:intergenic | 45.0% | |
CATTACCAGCTCAACATCAG+TGG | - | chr3_1:78612354-78612373 | None:intergenic | 45.0% | |
TGGTACTTCTTTACCCCTGT+TGG | + | chr3_1:78612614-78612633 | Msa0377930:CDS | 45.0% | |
GGAAAGAAATATTGCACGGG+AGG | + | chr3_1:78612635-78612654 | Msa0377930:CDS | 45.0% | |
ATGAATCGGGCAACAGAAGT+AGG | + | chr3_1:78612662-78612681 | Msa0377930:CDS | 45.0% | |
TGAATCGGGCAACAGAAGTA+GGG | + | chr3_1:78612663-78612682 | Msa0377930:CDS | 45.0% | |
!! | TAGGGTACTGGAAGACTACA+GGG | + | chr3_1:78612681-78612700 | Msa0377930:CDS | 45.0% |
TTTGCCAGTGTGAAACACCA+GGG | - | chr3_1:78612756-78612775 | None:intergenic | 45.0% | |
CAATCAGTTCGGTCTCCTTT+AGG | - | chr3_1:78612782-78612801 | None:intergenic | 45.0% | |
CTAAAGGAGACCGAACTGAT+TGG | + | chr3_1:78612780-78612799 | Msa0377930:CDS | 45.0% | |
GACAAAGACCTAGCTGACAA+TGG | + | chr3_1:78612827-78612846 | Msa0377930:CDS | 45.0% | |
! | CTGGCTTTCACGTGTAACAA+AGG | - | chr3_1:78612985-78613004 | None:intergenic | 45.0% |
! | AAGCACGCACGAAGTATCTA+CGG | - | chr3_1:78613119-78613138 | None:intergenic | 45.0% |
! | CGTGCTTACATAGCATTGAG+TGG | + | chr3_1:78613132-78613151 | Msa0377930:intron | 45.0% |
! | TTTTCCCAAAGGTCTGTTGG+GGG | + | chr3_1:78613461-78613480 | Msa0377930:intron | 45.0% |
TTGGGGGCTTATGGAGTTAT+GGG | + | chr3_1:78613477-78613496 | Msa0377930:intron | 45.0% | |
AAATGGAAGGATGGAGTGGA+AGG | + | chr3_1:78613529-78613548 | Msa0377930:intron | 45.0% | |
ATGGAGTGGAAGGAATGAAG+AGG | + | chr3_1:78613539-78613558 | Msa0377930:intron | 45.0% | |
GTGGAAGGAATGAAGAGGTT+TGG | + | chr3_1:78613544-78613563 | Msa0377930:intron | 45.0% | |
! | GGAATGAAGAGGTTTGGTAG+GGG | + | chr3_1:78613550-78613569 | Msa0377930:intron | 45.0% |
CTAAACCCCTCCTAATTTGG+GGG | + | chr3_1:78613640-78613659 | Msa0377930:intron | 45.0% | |
TGAGTTCCCCCAAATTAGGA+GGG | - | chr3_1:78613649-78613668 | None:intergenic | 45.0% | |
TTGAGTTCCCCCAAATTAGG+AGG | - | chr3_1:78613650-78613669 | None:intergenic | 45.0% | |
GTCTGTTCAGATGTTTCGAG+GGG | - | chr3_1:78613864-78613883 | None:intergenic | 45.0% | |
GGTCTGTTCAGATGTTTCGA+GGG | - | chr3_1:78613865-78613884 | None:intergenic | 45.0% | |
CATCTGAACAGACCCTAAAG+AGG | + | chr3_1:78613871-78613890 | Msa0377930:intron | 45.0% | |
CCAATACATCCACTTGCAGA+GGG | - | chr3_1:78614256-78614275 | None:intergenic | 45.0% | |
TCCAATACATCCACTTGCAG+AGG | - | chr3_1:78614257-78614276 | None:intergenic | 45.0% | |
CTATCAAGATTGATGCCCTC+TGG | + | chr3_1:78614295-78614314 | Msa0377930:CDS | 45.0% | |
CTTGATTGCCTAGAGCTGAA+GGG | - | chr3_1:78614330-78614349 | None:intergenic | 45.0% | |
! | GACGATGAAAATGCATTGGC+CGG | + | chr3_1:78614385-78614404 | Msa0377930:CDS | 45.0% |
! | ACGATGAAAATGCATTGGCC+GGG | + | chr3_1:78614386-78614405 | Msa0377930:CDS | 45.0% |
TTGGCCGGGAATGAAAACAA+TGG | + | chr3_1:78614400-78614419 | Msa0377930:CDS | 45.0% | |
AGTCAGAGCTACCAAAGTTG+GGG | - | chr3_1:78614490-78614509 | None:intergenic | 45.0% | |
TTAGTGTTATGCAAGGGCCA+TGG | + | chr3_1:78614709-78614728 | Msa0377930:intron | 45.0% | |
AGCAAGAATGGTAACCACCA+TGG | - | chr3_1:78614729-78614748 | None:intergenic | 45.0% | |
TGAGATTGGTGCAGCAAGAA+TGG | - | chr3_1:78614741-78614760 | None:intergenic | 45.0% | |
!! | GCCATTGTTGGTGATGAGAT+TGG | - | chr3_1:78614755-78614774 | None:intergenic | 45.0% |
AGAAATCGGATCATGAGCCA+TGG | + | chr3_1:78614810-78614829 | Msa0377930:intron | 45.0% | |
ATCTGGCAAGCTTCCATTTC+TGG | + | chr3_1:78615097-78615116 | Msa0377930:intron | 45.0% | |
!! | TAGCATAAGTGGACTAGTGG+AGG | - | chr3_1:78615239-78615258 | None:intergenic | 45.0% |
!! | CAGTAGCATAAGTGGACTAG+TGG | - | chr3_1:78615242-78615261 | None:intergenic | 45.0% |
! | ACATATGCTGGCAGTGCTTT+TGG | + | chr3_1:78615312-78615331 | Msa0377930:intron | 45.0% |
GTTCTAATGGCAGATGGCAT+AGG | - | chr3_1:78615421-78615440 | None:intergenic | 45.0% | |
GCCATCTGCCATTAGAACAT+TGG | + | chr3_1:78615423-78615442 | Msa0377930:intron | 45.0% | |
AAAAGATTGGGGGCAAGAAG+TGG | + | chr3_1:78615477-78615496 | Msa0377930:intron | 45.0% | |
! | TTTTCCTGCCTTCGACTAGA+AGG | - | chr3_1:78615503-78615522 | None:intergenic | 45.0% |
TTTGCACAAAAGGGGTAGCA+AGG | - | chr3_1:78615740-78615759 | None:intergenic | 45.0% | |
!! | CTTTTGTTTAGGGAGGGTGA+AGG | + | chr3_1:78615844-78615863 | Msa0377930:intron | 45.0% |
CCTCTGCCATCTTGATTAGT+AGG | - | chr3_1:78615961-78615980 | None:intergenic | 45.0% | |
CCTACTAATCAAGATGGCAG+AGG | + | chr3_1:78615958-78615977 | Msa0377930:intron | 45.0% | |
!! | CGACAGAAGGTTGATAATCC+TGG | + | chr3_1:78616121-78616140 | Msa0377930:intron | 45.0% |
CCAAGCTGTTAATATCTCCC+AGG | - | chr3_1:78616204-78616223 | None:intergenic | 45.0% | |
CCTGGGAGATATTAACAGCT+TGG | + | chr3_1:78616201-78616220 | Msa0377930:CDS | 45.0% | |
! | AGCTTGGTTGGATTGGATGA+TGG | + | chr3_1:78616217-78616236 | Msa0377930:CDS | 45.0% |
!! | GTTGGATTGGATGATGGAAG+CGG | + | chr3_1:78616223-78616242 | Msa0377930:CDS | 45.0% |
! | GATGGAAGCGGTTTTTCCTA+TGG | + | chr3_1:78616235-78616254 | Msa0377930:CDS | 45.0% |
GCAACTCAAAGAAATCAGGG+GGG | - | chr3_1:78616324-78616343 | None:intergenic | 45.0% | |
!! | CTTTGAGTTGCTTGACCTAG+AGG | + | chr3_1:78616333-78616352 | Msa0377930:CDS | 45.0% |
TCCTGGCAGACTAAACATGA+TGG | + | chr3_1:78616364-78616383 | Msa0377930:CDS | 45.0% | |
TCCTGGCAGACTAAACATGA+TGG | + | chr3_1:78616364-78616383 | Msa0377930:CDS | 45.0% | |
TCCATCATGTTTAGTCTGCC+AGG | - | chr3_1:78616427-78616446 | None:intergenic | 45.0% | |
!! | AATTATTATTAGTATTAATA+AGG | + | chr3_1:78613371-78613390 | Msa0377930:intron | 5.0% |
!! | ATTATTATTAGTATTAATAA+GGG | + | chr3_1:78613372-78613391 | Msa0377930:intron | 5.0% |
TCTTCCGGTGAGTGAGTAAG+AGG | - | chr3_1:78611654-78611673 | None:intergenic | 50.0% | |
! | GAGAGTGTATGAAGCACGGA+AGG | - | chr3_1:78611752-78611771 | None:intergenic | 50.0% |
GGTGCTTTCTCATCCTTCTC+CGG | + | chr3_1:78611805-78611824 | Msa0377930:five_prime_UTR | 50.0% | |
AAGAGGAAGCTTACCGGAGA+AGG | - | chr3_1:78611821-78611840 | None:intergenic | 50.0% | |
GAGCGATTGGGGAAAATGCA+TGG | - | chr3_1:78611862-78611881 | None:intergenic | 50.0% | |
! | GCTACAACGGATGGTGATGA+TGG | - | chr3_1:78611959-78611978 | None:intergenic | 50.0% |
GACTGGAAAGCTACAACGGA+TGG | - | chr3_1:78611968-78611987 | None:intergenic | 50.0% | |
TATGCTCCATGGGATCTACC+AGG | + | chr3_1:78612446-78612465 | Msa0377930:CDS | 50.0% | |
TCCATGGGATCTACCAGGTT+TGG | + | chr3_1:78612451-78612470 | Msa0377930:intron | 50.0% | |
TCCAAACCTGGTAGATCCCA+TGG | - | chr3_1:78612455-78612474 | None:intergenic | 50.0% | |
AGAAATATTGCACGGGAGGG+AGG | + | chr3_1:78612639-78612658 | Msa0377930:CDS | 50.0% | |
!! | GTAGGGTACTGGAAGACTAC+AGG | + | chr3_1:78612680-78612699 | Msa0377930:CDS | 50.0% |
GTACTGGAAGACTACAGGGA+AGG | + | chr3_1:78612685-78612704 | Msa0377930:CDS | 50.0% | |
GGAAGACTACAGGGAAGGAT+AGG | + | chr3_1:78612690-78612709 | Msa0377930:CDS | 50.0% | |
AGAACCCTGGTGTTTCACAC+TGG | + | chr3_1:78612749-78612768 | Msa0377930:CDS | 50.0% | |
CTTTGCCAGTGTGAAACACC+AGG | - | chr3_1:78612757-78612776 | None:intergenic | 50.0% | |
CACACTGGCAAAGCTCCTAA+AGG | + | chr3_1:78612764-78612783 | Msa0377930:CDS | 50.0% | |
GTGGAACACCATTGTCAGCT+AGG | - | chr3_1:78612838-78612857 | None:intergenic | 50.0% | |
AGCTGACAATGGTGTTCCAC+AGG | + | chr3_1:78612838-78612857 | Msa0377930:CDS | 50.0% | |
TAAGCCCCCAACAGACCTTT+GGG | - | chr3_1:78613468-78613487 | None:intergenic | 50.0% | |
ATAAGCCCCCAACAGACCTT+TGG | - | chr3_1:78613469-78613488 | None:intergenic | 50.0% | |
AAAGGTCTGTTGGGGGCTTA+TGG | + | chr3_1:78613468-78613487 | Msa0377930:intron | 50.0% | |
GTTGGGGGCTTATGGAGTTA+TGG | + | chr3_1:78613476-78613495 | Msa0377930:intron | 50.0% | |
TGGGGGCTTATGGAGTTATG+GGG | + | chr3_1:78613478-78613497 | Msa0377930:intron | 50.0% | |
GCTTATGGAGTTATGGGGGA+GGG | + | chr3_1:78613483-78613502 | Msa0377930:intron | 50.0% | |
CTTATGGAGTTATGGGGGAG+GGG | + | chr3_1:78613484-78613503 | Msa0377930:intron | 50.0% | |
! | ATGAAGAGGTTTGGTAGGGG+AGG | + | chr3_1:78613553-78613572 | Msa0377930:intron | 50.0% |
! | TGAAGAGGTTTGGTAGGGGA+GGG | + | chr3_1:78613554-78613573 | Msa0377930:intron | 50.0% |
GAGGGGTTTAGTTGGTCCTT+GGG | - | chr3_1:78613631-78613650 | None:intergenic | 50.0% | |
GAGTTCCCCCAAATTAGGAG+GGG | - | chr3_1:78613648-78613667 | None:intergenic | 50.0% | |
TTCAGATGTTTCGAGGGGAG+AGG | - | chr3_1:78613859-78613878 | None:intergenic | 50.0% | |
GGGTCTGTTCAGATGTTTCG+AGG | - | chr3_1:78613866-78613885 | None:intergenic | 50.0% | |
CCATACTGTGCACCATTCCT+GGG | - | chr3_1:78614097-78614116 | None:intergenic | 50.0% | |
TCCATACTGTGCACCATTCC+TGG | - | chr3_1:78614098-78614117 | None:intergenic | 50.0% | |
GAAAGACTGGGATAGCGAAG+AGG | + | chr3_1:78614132-78614151 | Msa0377930:CDS | 50.0% | |
GAGCTAGGTAGAATGAGAGC+TGG | - | chr3_1:78614202-78614221 | None:intergenic | 50.0% | |
CCCTCTGCAAGTGGATGTAT+TGG | + | chr3_1:78614253-78614272 | Msa0377930:CDS | 50.0% | |
ATGACACACCCTTCAGCTCT+AGG | + | chr3_1:78614319-78614338 | Msa0377930:CDS | 50.0% | |
GCTTGATTGCCTAGAGCTGA+AGG | - | chr3_1:78614331-78614350 | None:intergenic | 50.0% | |
!! | TACCAAAGTTGGGGAGCATC+TGG | - | chr3_1:78614481-78614500 | None:intergenic | 50.0% |
CTCATCACCAACAATGGCGA+TGG | + | chr3_1:78614757-78614776 | Msa0377930:intron | 50.0% | |
CAATCTGCCATCGCCATTGT+TGG | - | chr3_1:78614767-78614786 | None:intergenic | 50.0% | |
!! | GTTTTGGGTCTGTCTAGCCA+TGG | - | chr3_1:78614830-78614849 | None:intergenic | 50.0% |
GGAAGCTTGCCAGATATTGG+AGG | - | chr3_1:78615092-78615111 | None:intergenic | 50.0% | |
AGAAGTGGCCTTCTAGTCGA+AGG | + | chr3_1:78615492-78615511 | Msa0377930:intron | 50.0% | |
!! | ACCTAGAGGTGCCATTATCC+TGG | + | chr3_1:78616347-78616366 | Msa0377930:CDS | 50.0% |
GCCATCATGTTTAGTCTGCC+AGG | - | chr3_1:78616368-78616387 | None:intergenic | 50.0% | |
!! | ACCTAGAGGTGCCATTATCC+TGG | + | chr3_1:78616347-78616366 | Msa0377930:CDS | 50.0% |
TCCGGTGAGTGAGTAAGAGG+TGG | - | chr3_1:78611651-78611670 | None:intergenic | 55.0% | |
GGGGTTGCTTCTCTCTCTTC+CGG | - | chr3_1:78611669-78611688 | None:intergenic | 55.0% | |
!! | ATGAGAAAGCACCGCGAACG+AGG | - | chr3_1:78611798-78611817 | None:intergenic | 55.0% |
ACAATCGTCGCAGCAGGCTT+TGG | + | chr3_1:78612011-78612030 | Msa0377930:five_prime_UTR | 55.0% | |
GTGGGGTGAAAACGAAACCC+TGG | - | chr3_1:78612335-78612354 | None:intergenic | 55.0% | |
TCACCCCACTGATGTTGAGC+TGG | + | chr3_1:78612346-78612365 | Msa0377930:CDS | 55.0% | |
GGGCAACAGAAGTAGGGTAC+TGG | + | chr3_1:78612669-78612688 | Msa0377930:CDS | 55.0% | |
GGTGGGGATGATAAGAACCC+TGG | + | chr3_1:78612736-78612755 | Msa0377930:CDS | 55.0% | |
GGGGGCTTATGGAGTTATGG+GGG | + | chr3_1:78613479-78613498 | Msa0377930:intron | 55.0% | |
GGCTTATGGAGTTATGGGGG+AGG | + | chr3_1:78613482-78613501 | Msa0377930:intron | 55.0% | |
GTTTGGTAGGGGAGGGCTTT+GGG | + | chr3_1:78613561-78613580 | Msa0377930:intron | 55.0% | |
TTTGGTAGGGGAGGGCTTTG+GGG | + | chr3_1:78613562-78613581 | Msa0377930:intron | 55.0% | |
GAAACTTGGTATCCGGCCCA+AGG | + | chr3_1:78613612-78613631 | Msa0377930:intron | 55.0% | |
GGTTTAGTTGGTCCTTGGGC+CGG | - | chr3_1:78613627-78613646 | None:intergenic | 55.0% | |
GGAGGGGTTTAGTTGGTCCT+TGG | - | chr3_1:78613632-78613651 | None:intergenic | 55.0% | |
GATGTTTCGAGGGGAGAGGA+TGG | - | chr3_1:78613855-78613874 | None:intergenic | 55.0% | |
AAAAGGAAGGTCCTGGTCCC+AGG | + | chr3_1:78614077-78614096 | Msa0377930:CDS | 55.0% | |
CCCAGGAATGGTGCACAGTA+TGG | + | chr3_1:78614094-78614113 | Msa0377930:CDS | 55.0% | |
GTGCAGACACAGCAGCAACA+GGG | - | chr3_1:78614180-78614199 | None:intergenic | 55.0% | |
GACATGCATCCCTCTGCAAG+TGG | + | chr3_1:78614244-78614263 | Msa0377930:CDS | 55.0% | |
! | GAAGGGTGTGTCATGCCAGA+GGG | - | chr3_1:78614313-78614332 | None:intergenic | 55.0% |
! | TGAAGGGTGTGTCATGCCAG+AGG | - | chr3_1:78614314-78614333 | None:intergenic | 55.0% |
TGCCAGATGCTCCCCAACTT+TGG | + | chr3_1:78614476-78614495 | Msa0377930:intron | 55.0% | |
GTGTTATGCAAGGGCCATGG+TGG | + | chr3_1:78614712-78614731 | Msa0377930:intron | 55.0% | |
! | GCCAGGATAATGGCACCTCT+AGG | - | chr3_1:78616351-78616370 | None:intergenic | 55.0% |
! | GCCAGGATAATGGCACCTCT+AGG | - | chr3_1:78616351-78616370 | None:intergenic | 55.0% |
GCACGGGAGGGAGGATGAAT+CGG | + | chr3_1:78612648-78612667 | Msa0377930:CDS | 60.0% | |
CACGGGAGGGAGGATGAATC+GGG | + | chr3_1:78612649-78612668 | Msa0377930:CDS | 60.0% | |
AGTTATGGGGGAGGGGAGAG+AGG | + | chr3_1:78613491-78613510 | Msa0377930:intron | 60.0% | |
! | GGTTTGGTAGGGGAGGGCTT+TGG | + | chr3_1:78613560-78613579 | Msa0377930:intron | 60.0% |
!! | GAGAGGATGGCTTTGGGAGC+AGG | - | chr3_1:78613842-78613861 | None:intergenic | 60.0% |
CGAGGGGAGAGGATGGCTTT+GGG | - | chr3_1:78613848-78613867 | None:intergenic | 60.0% | |
TCGAGGGGAGAGGATGGCTT+TGG | - | chr3_1:78613849-78613868 | None:intergenic | 60.0% | |
GAAGGTCCTGGTCCCAGGAA+TGG | + | chr3_1:78614082-78614101 | Msa0377930:CDS | 60.0% | |
TGTGCACCATTCCTGGGACC+AGG | - | chr3_1:78614091-78614110 | None:intergenic | 60.0% | |
GGTGCAGACACAGCAGCAAC+AGG | - | chr3_1:78614181-78614200 | None:intergenic | 60.0% | |
GTGGCCTTCTAGTCGAAGGC+AGG | + | chr3_1:78615496-78615515 | Msa0377930:intron | 60.0% | |
TGGGGGAGGGGAGAGAGGAG+AGG | + | chr3_1:78613496-78613515 | Msa0377930:intron | 70.0% | |
GGGGGAGGGGAGAGAGGAGA+GGG | + | chr3_1:78613497-78613516 | Msa0377930:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_1 | gene | 78611648 | 78616667 | 78611648 | ID=Msa0377930;Name=Msa0377930 |
chr3_1 | mRNA | 78611648 | 78616667 | 78611648 | ID=Msa0377930-mRNA-1;Parent=Msa0377930;Name=Msa0377930-mRNA-1;_AED=0.03;_eAED=0.03;_QI=570|1|1|1|0.75|0.6|5|277|360 |
chr3_1 | exon | 78611648 | 78611826 | 78611648 | ID=Msa0377930-mRNA-1:exon:18951;Parent=Msa0377930-mRNA-1 |
chr3_1 | exon | 78611917 | 78612467 | 78611917 | ID=Msa0377930-mRNA-1:exon:18952;Parent=Msa0377930-mRNA-1 |
chr3_1 | exon | 78612582 | 78612859 | 78612582 | ID=Msa0377930-mRNA-1:exon:18953;Parent=Msa0377930-mRNA-1 |
chr3_1 | exon | 78614049 | 78614429 | 78614049 | ID=Msa0377930-mRNA-1:exon:18954;Parent=Msa0377930-mRNA-1 |
chr3_1 | exon | 78616127 | 78616667 | 78616127 | ID=Msa0377930-mRNA-1:exon:18955;Parent=Msa0377930-mRNA-1 |
chr3_1 | five_prime_UTR | 78611648 | 78611826 | 78611648 | ID=Msa0377930-mRNA-1:five_prime_utr;Parent=Msa0377930-mRNA-1 |
chr3_1 | five_prime_UTR | 78611917 | 78612307 | 78611917 | ID=Msa0377930-mRNA-1:five_prime_utr;Parent=Msa0377930-mRNA-1 |
chr3_1 | CDS | 78612308 | 78612467 | 78612308 | ID=Msa0377930-mRNA-1:cds;Parent=Msa0377930-mRNA-1 |
chr3_1 | CDS | 78612582 | 78612859 | 78612582 | ID=Msa0377930-mRNA-1:cds;Parent=Msa0377930-mRNA-1 |
chr3_1 | CDS | 78614049 | 78614429 | 78614049 | ID=Msa0377930-mRNA-1:cds;Parent=Msa0377930-mRNA-1 |
chr3_1 | CDS | 78616127 | 78616390 | 78616127 | ID=Msa0377930-mRNA-1:cds;Parent=Msa0377930-mRNA-1 |
chr3_1 | three_prime_UTR | 78616391 | 78616667 | 78616391 | ID=Msa0377930-mRNA-1:three_prime_utr;Parent=Msa0377930-mRNA-1 |
Gene Sequence |
Protein sequence |