Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0474490 | XP_003602708.1 | 67.516 | 157 | 31 | 3 | 322 | 459 | 1 | 156 | 3.89e-57 | 200 |
Msa0474490 | XP_003602708.1 | 72.848 | 151 | 31 | 3 | 4 | 147 | 9 | 156 | 7.07e-62 | 213 |
Msa0474490 | XP_003602708.1 | 74.000 | 150 | 32 | 3 | 469 | 612 | 1 | 149 | 4.35e-63 | 216 |
Msa0474490 | XP_003602708.1 | 92.500 | 160 | 7 | 1 | 161 | 315 | 1 | 160 | 2.22e-94 | 297 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0474490 | sp|Q5R833|ACO13_PONAB | 37.383 | 107 | 57 | 3 | 210 | 309 | 35 | 138 | 5.46e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0474490 | G7J2P4 | 67.516 | 157 | 31 | 3 | 322 | 459 | 1 | 156 | 1.86e-57 | 200 |
Msa0474490 | G7J2P4 | 72.848 | 151 | 31 | 3 | 4 | 147 | 9 | 156 | 3.38e-62 | 213 |
Msa0474490 | G7J2P4 | 74.000 | 150 | 32 | 3 | 469 | 612 | 1 | 149 | 2.08e-63 | 216 |
Msa0474490 | G7J2P4 | 92.500 | 160 | 7 | 1 | 161 | 315 | 1 | 160 | 1.06e-94 | 297 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0197660 | Msa0474490 | 0.815108 | 1.094498e-51 | -8.615850e-47 |
Msa0428240 | Msa0474490 | 0.821390 | 4.141826e-53 | -8.615850e-47 |
Msa0474490 | Msa0517090 | 0.810167 | 1.318692e-50 | -8.615850e-47 |
Msa0474490 | Msa0679290 | -0.820699 | 5.975560e-53 | -8.615850e-47 |
Msa0474490 | Msa0942550 | -0.805253 | 1.459703e-49 | -8.615850e-47 |
Msa0474490 | Msa1238930 | 0.800830 | 1.198993e-48 | -8.615850e-47 |
Msa0474490 | Msa1447110 | 0.814294 | 1.657816e-51 | -8.615850e-47 |
Msa0239800 | Msa0474490 | 0.815449 | 9.190514e-52 | -8.615850e-47 |
Msa0317510 | Msa0474490 | 0.814008 | 1.917470e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0474490 | MtrunA17_Chr3g0131251 | 92.500 | 160 | 7 | 1 | 161 | 315 | 1 | 160 | 2.04e-98 | 297 |
Msa0474490 | MtrunA17_Chr3g0131251 | 74.000 | 150 | 32 | 3 | 469 | 612 | 1 | 149 | 4.01e-67 | 216 |
Msa0474490 | MtrunA17_Chr3g0131251 | 72.848 | 151 | 31 | 3 | 4 | 147 | 9 | 156 | 6.51e-66 | 213 |
Msa0474490 | MtrunA17_Chr3g0131251 | 67.516 | 157 | 31 | 3 | 322 | 459 | 1 | 156 | 3.58e-61 | 200 |
Msa0474490 | MtrunA17_Chr3g0131241 | 84.940 | 166 | 5 | 3 | 322 | 468 | 1 | 165 | 2.56e-87 | 268 |
Msa0474490 | MtrunA17_Chr3g0131241 | 75.000 | 156 | 34 | 1 | 161 | 311 | 1 | 156 | 1.76e-77 | 243 |
Msa0474490 | MtrunA17_Chr3g0131241 | 78.000 | 150 | 26 | 3 | 469 | 612 | 1 | 149 | 2.82e-72 | 229 |
Msa0474490 | MtrunA17_Chr3g0131241 | 68.125 | 160 | 36 | 4 | 1 | 148 | 1 | 157 | 2.37e-62 | 203 |
Msa0474490 | MtrunA17_Chr3g0131211 | 68.712 | 163 | 43 | 2 | 161 | 315 | 1 | 163 | 2.59e-69 | 222 |
Msa0474490 | MtrunA17_Chr3g0131211 | 69.737 | 152 | 38 | 3 | 469 | 612 | 1 | 152 | 5.24e-67 | 216 |
Msa0474490 | MtrunA17_Chr3g0131211 | 68.212 | 151 | 41 | 2 | 4 | 147 | 9 | 159 | 3.34e-61 | 200 |
Msa0474490 | MtrunA17_Chr3g0131211 | 60.625 | 160 | 40 | 4 | 322 | 459 | 1 | 159 | 1.64e-54 | 182 |
Msa0474490 | MtrunA17_Chr3g0131231 | 77.083 | 144 | 13 | 2 | 469 | 612 | 1 | 124 | 4.40e-66 | 212 |
Msa0474490 | MtrunA17_Chr3g0131231 | 70.677 | 133 | 28 | 1 | 183 | 315 | 14 | 135 | 1.62e-59 | 195 |
Msa0474490 | MtrunA17_Chr3g0131231 | 65.185 | 135 | 33 | 3 | 15 | 147 | 9 | 131 | 8.73e-49 | 166 |
Msa0474490 | MtrunA17_Chr3g0131231 | 60.769 | 130 | 25 | 3 | 344 | 459 | 14 | 131 | 7.26e-42 | 147 |
Msa0474490 | MtrunA17_Chr3g0131261 | 85.586 | 111 | 11 | 1 | 1 | 106 | 1 | 111 | 2.63e-59 | 195 |
Msa0474490 | MtrunA17_Chr3g0131261 | 69.159 | 107 | 25 | 2 | 170 | 268 | 5 | 111 | 5.20e-44 | 154 |
Msa0474490 | MtrunA17_Chr3g0131261 | 64.815 | 108 | 31 | 3 | 476 | 576 | 4 | 111 | 1.25e-39 | 142 |
Msa0474490 | MtrunA17_Chr3g0131261 | 59.633 | 109 | 31 | 3 | 322 | 422 | 1 | 104 | 3.22e-33 | 124 |
Msa0474490 | MtrunA17_Chr3g0131191 | 65.385 | 156 | 44 | 4 | 169 | 315 | 1 | 155 | 1.67e-58 | 193 |
Msa0474490 | MtrunA17_Chr3g0131191 | 59.441 | 143 | 51 | 3 | 477 | 612 | 2 | 144 | 2.31e-48 | 166 |
Msa0474490 | MtrunA17_Chr3g0131191 | 62.252 | 151 | 46 | 5 | 5 | 146 | 2 | 150 | 2.69e-47 | 163 |
Msa0474490 | MtrunA17_Chr3g0131191 | 54.000 | 150 | 46 | 5 | 331 | 458 | 2 | 150 | 7.90e-39 | 140 |
Msa0474490 | MtrunA17_Chr3g0131201 | 58.046 | 174 | 52 | 4 | 148 | 315 | 38 | 196 | 7.59e-56 | 187 |
Msa0474490 | MtrunA17_Chr3g0131201 | 62.416 | 149 | 45 | 2 | 469 | 612 | 43 | 185 | 1.48e-55 | 187 |
Msa0474490 | MtrunA17_Chr3g0131201 | 62.252 | 151 | 42 | 4 | 2 | 145 | 48 | 190 | 7.93e-50 | 171 |
Msa0474490 | MtrunA17_Chr3g0131201 | 54.717 | 159 | 54 | 6 | 316 | 459 | 37 | 192 | 4.81e-42 | 150 |
Msa0474490 | MtrunA17_Chr3g0131221 | 82.979 | 47 | 8 | 0 | 269 | 315 | 48 | 94 | 2.23e-20 | 86.3 |
Msa0474490 | MtrunA17_Chr3g0131221 | 73.810 | 42 | 10 | 1 | 416 | 457 | 48 | 88 | 1.56e-13 | 66.6 |
Msa0474490 | MtrunA17_Chr3g0131221 | 83.333 | 36 | 6 | 0 | 577 | 612 | 48 | 83 | 2.85e-13 | 65.9 |
Msa0474490 | MtrunA17_Chr3g0131221 | 74.419 | 43 | 9 | 1 | 107 | 147 | 48 | 90 | 5.10e-12 | 62.4 |
Msa0474490 | MtrunA17_Chr5g0429471 | 33.858 | 127 | 77 | 2 | 194 | 315 | 37 | 161 | 2.32e-16 | 77.0 |
Msa0474490 | MtrunA17_Chr5g0429471 | 36.207 | 116 | 67 | 2 | 502 | 612 | 37 | 150 | 8.38e-16 | 75.5 |
Msa0474490 | MtrunA17_Chr5g0429471 | 34.483 | 116 | 67 | 3 | 32 | 140 | 37 | 150 | 1.83e-12 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0474490 | AT1G04290.1 | 58.000 | 150 | 53 | 3 | 169 | 309 | 1 | 149 | 1.41e-46 | 161 |
Msa0474490 | AT1G04290.1 | 56.250 | 144 | 54 | 3 | 477 | 612 | 2 | 144 | 2.59e-43 | 152 |
Msa0474490 | AT1G04290.1 | 55.195 | 154 | 60 | 4 | 5 | 150 | 2 | 154 | 1.62e-40 | 145 |
Msa0474490 | AT1G04290.1 | 48.667 | 150 | 52 | 5 | 331 | 457 | 2 | 149 | 4.25e-32 | 122 |
Msa0474490 | AT1G04290.2 | 51.852 | 108 | 43 | 3 | 477 | 576 | 2 | 108 | 4.26e-25 | 101 |
Msa0474490 | AT1G04290.2 | 50.459 | 109 | 44 | 3 | 169 | 268 | 1 | 108 | 2.67e-23 | 96.3 |
Msa0474490 | AT1G04290.2 | 52.336 | 107 | 44 | 3 | 5 | 105 | 2 | 107 | 1.48e-22 | 94.0 |
Msa0474490 | AT1G04290.2 | 46.465 | 99 | 43 | 3 | 331 | 420 | 2 | 99 | 3.17e-17 | 79.0 |
Msa0474490 | AT2G29590.1 | 33.540 | 161 | 87 | 5 | 171 | 315 | 2 | 158 | 1.41e-16 | 77.8 |
Msa0474490 | AT2G29590.1 | 36.667 | 120 | 65 | 4 | 500 | 612 | 32 | 147 | 3.88e-14 | 70.9 |
Msa0474490 | AT2G29590.1 | 31.613 | 155 | 85 | 5 | 6 | 144 | 2 | 151 | 5.70e-11 | 61.6 |
Find 144 sgRNAs with CRISPR-Local
Find 811 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGAATTTCCTCCCAAGTTTC+TGG | 0.072394 | 3_3:-77386942 | Msa0474490:CDS |
TAAATTTCCTCCGAAGTTTC+TGG | 0.138608 | 3_3:-77393409 | Msa0474490:CDS |
ACTGACAAAGGGAAGATATT+TGG | 0.225921 | 3_3:+77385647 | None:intergenic |
GCTGGATTTCCGTGGAATTC+TGG | 0.244104 | 3_3:-77379185 | Msa0474490:CDS |
AGAATCAGTGAAGAGGTATT+TGG | 0.264125 | 3_3:-77386993 | Msa0474490:CDS |
AGCAGAAGCTTCAACAGATT+TGG | 0.268181 | 3_3:-77379517 | Msa0474490:CDS |
TTACAAAATATCTTCCCTTT+AGG | 0.295587 | 3_3:-77389674 | Msa0474490:CDS |
GTAATCTAAGAGATGGTTCT+TGG | 0.327673 | 3_3:-77377721 | Msa0474490:three_prime_UTR |
CTGTTGTAAGCGTGGAGTTC+AGG | 0.335840 | 3_3:-77379064 | Msa0474490:CDS |
GTTTCTGGAACATCTAATCT+TGG | 0.344011 | 3_3:-77393394 | Msa0474490:CDS |
GAAAGGAGAAGCGTCGTTAA+AGG | 0.351047 | 3_3:-77393442 | Msa0474490:CDS |
GCTGAATTTCCGTGGAAATC+TGG | 0.357454 | 3_3:-77384098 | Msa0474490:CDS |
CAGAAGGTAGTTTGCAATAG+TGG | 0.373095 | 3_3:+77377816 | None:intergenic |
AGAAGGAACGATACCGGATT+TGG | 0.374832 | 3_3:-77384447 | Msa0474490:CDS |
AATCGAAGATAGTAAAGATT+GGG | 0.376588 | 3_3:-77387068 | Msa0474490:intron |
AACCTTGCGCGGCCTACAAT+TGG | 0.378951 | 3_3:-77379412 | Msa0474490:CDS |
GCTGGATTTCAGTTGGATAC+TGG | 0.394930 | 3_3:-77393101 | Msa0474490:CDS |
GCTGGATTTCCGATGGATAC+TGG | 0.400055 | 3_3:-77386671 | Msa0474490:CDS |
TTCTTCACTGATTCCAAATC+CGG | 0.408704 | 3_3:+77384434 | None:intergenic |
TGATGTTGAGCTCTATGCTT+TGG | 0.414623 | 3_3:-77377972 | Msa0474490:three_prime_UTR |
CATCGTGCGTGGCCTACGAT+TGG | 0.426469 | 3_3:-77386912 | Msa0474490:CDS |
AAGAGGTACTTGGAGGAGAA+AGG | 0.429137 | 3_3:-77393459 | Msa0474490:CDS |
GAATCGAAGATAGTAAAGAT+TGG | 0.435791 | 3_3:-77387069 | Msa0474490:intron |
AATCTTACGCGCCCTGCGAT+TGG | 0.441477 | 3_3:-77384345 | Msa0474490:CDS |
GATGAAAGGTTCCAGAAACT+TGG | 0.442003 | 3_3:+77386931 | None:intergenic |
CGCTTGGATCTCATTGAGCC+TGG | 0.445136 | 3_3:-77393363 | Msa0474490:CDS |
GCAGCCGCAATTCCAGCAGC+TGG | 0.448321 | 3_3:-77379203 | Msa0474490:CDS |
AATCTTGGGTGGCTTACGCT+TGG | 0.453352 | 3_3:-77393379 | Msa0474490:CDS |
GAAGAGGAAAGGAAATAGAA+TGG | 0.455846 | 3_3:-77384477 | Msa0474490:CDS |
TCAATCGCAATTCCCGCCGC+TGG | 0.459843 | 3_3:-77393119 | Msa0474490:CDS |
GCATGAAATATTGATCTCAA+TGG | 0.461406 | 3_3:+77379157 | None:intergenic |
GATGTTGAGCTCTATGCTTT+GGG | 0.461726 | 3_3:-77377971 | Msa0474490:three_prime_UTR |
AGGAGATTGAGATTGATGCT+AGG | 0.470918 | 3_3:-77389776 | Msa0474490:CDS |
TTTCTGGAACATCTAATCTT+GGG | 0.471271 | 3_3:-77393393 | Msa0474490:CDS |
AATTCAGAAACACTTGAAGA+TGG | 0.472338 | 3_3:-77377999 | Msa0474490:intron |
GCAATTGCAATTCCTGCCGC+TGG | 0.476508 | 3_3:-77386689 | Msa0474490:CDS |
CGTAGGCCACGCACGATGAA+AGG | 0.480275 | 3_3:+77386917 | None:intergenic |
GGAATCAGTGAAGAGGTACT+TGG | 0.484190 | 3_3:-77393469 | Msa0474490:CDS |
TCCCGCCGCTGGATTTCAGT+TGG | 0.485139 | 3_3:-77393108 | Msa0474490:CDS |
GTTCAATGAGATCCAATTGT+AGG | 0.486411 | 3_3:+77379400 | None:intergenic |
CATTGTTACTCTGGTGGATG+TGG | 0.494972 | 3_3:-77386717 | Msa0474490:CDS |
CATCATTACTCTGGTGGATG+TGG | 0.494972 | 3_3:-77393147 | Msa0474490:CDS |
GACGCCCTTGAGCACAAACT+TGG | 0.499356 | 3_3:+77389697 | None:intergenic |
CCGTAGTAAGCGTGGAGTTG+AGG | 0.499771 | 3_3:-77389734 | Msa0474490:CDS |
GGAGATTGAGATTGATGCTA+GGG | 0.506616 | 3_3:-77389775 | Msa0474490:CDS |
TTCCACGGAAATTCAGCTGC+GGG | 0.507895 | 3_3:+77384104 | None:intergenic |
CCTCAACTCCACGCTTACTA+CGG | 0.508564 | 3_3:+77389734 | None:intergenic |
CACATCCACCAGAGTAATGA+TGG | 0.509226 | 3_3:+77393148 | None:intergenic |
TTCCACGGAAATCCAGCTGC+TGG | 0.509333 | 3_3:+77379191 | None:intergenic |
GGAATCAGTGAAGAAGTACT+TGG | 0.510320 | 3_3:-77384426 | Msa0474490:CDS |
CTGGAACATCTAATCTTGGG+TGG | 0.511525 | 3_3:-77393390 | Msa0474490:CDS |
TGAGATCAATGTCTCATGCT+TGG | 0.515497 | 3_3:-77393069 | Msa0474490:CDS |
CGTTGGTGCCATTGTTACTC+TGG | 0.516580 | 3_3:-77386726 | Msa0474490:CDS |
ATTGAGAAAACGACACGGCC+AGG | 0.517820 | 3_3:+77386878 | None:intergenic |
ATTGAGAAAACGACACGGCC+AGG | 0.517820 | 3_3:+77393345 | None:intergenic |
GTTGCTTGTAATCTAAGAGA+TGG | 0.523638 | 3_3:-77377728 | Msa0474490:three_prime_UTR |
TCCTGCCGCTGGATTTCCGA+TGG | 0.525258 | 3_3:-77386678 | Msa0474490:CDS |
ACAGACCAAGTTTGTGCTCA+AGG | 0.525626 | 3_3:-77389702 | Msa0474490:CDS |
CGATTGGATCTCATTGAACC+TGG | 0.526041 | 3_3:-77384329 | Msa0474490:CDS |
TGTTGATACAAAGGCAAAGA+AGG | 0.526464 | 3_3:-77377866 | Msa0474490:three_prime_UTR |
CTGTTCTAAGCGTGGAGTTG+AGG | 0.531085 | 3_3:-77381584 | Msa0474490:CDS |
TCAGAGATGAGTATGATAGT+TGG | 0.532402 | 3_3:+77377940 | None:intergenic |
CGATTGGATCTCATTGAGCC+TGG | 0.533177 | 3_3:-77386896 | Msa0474490:CDS |
CTTTGCCTTTGTATCAACAG+TGG | 0.537958 | 3_3:+77377870 | None:intergenic |
CTGGAACCTTTCATCGTGCG+TGG | 0.538244 | 3_3:-77386923 | Msa0474490:CDS |
TCCATCGGAAATCCAGCGGC+AGG | 0.540610 | 3_3:+77386677 | None:intergenic |
TCCAACTGAAATCCAGCGGC+GGG | 0.545347 | 3_3:+77393107 | None:intergenic |
ATTAGATGTTCCAGAAACTT+CGG | 0.547234 | 3_3:+77393399 | None:intergenic |
TGGTGCCATCATTACTCTGG+TGG | 0.548725 | 3_3:-77393153 | Msa0474490:CDS |
GTTCAATGAGATCCAATCGC+AGG | 0.549182 | 3_3:+77384333 | None:intergenic |
CCTTGGTGCCATCATTACTC+TGG | 0.553351 | 3_3:-77393156 | Msa0474490:CDS |
ATTACTCTGGTGGATGTGGT+AGG | 0.556926 | 3_3:-77393143 | Msa0474490:CDS |
CAAGGTTCTACGAGTAGGAA+AGG | 0.557518 | 3_3:-77385739 | Msa0474490:CDS |
CAATTGGATCTCATTGAACC+TGG | 0.559460 | 3_3:-77379396 | Msa0474490:CDS |
CGGTGGTGCTATAACTACTC+TGG | 0.559606 | 3_3:-77379240 | Msa0474490:CDS |
CTTTCCTAGTCTTAGAACCC+TGG | 0.559843 | 3_3:+77381614 | None:intergenic |
TCTCAATTGCACATCTATTG+CGG | 0.560364 | 3_3:+77377908 | None:intergenic |
ATCCAATTGTAGGCCGCGCA+AGG | 0.564575 | 3_3:+77379410 | None:intergenic |
AGATTGAGATTGATACCACC+AGG | 0.573269 | 3_3:-77381632 | Msa0474490:CDS |
GGTAGATGATGAATTGCCTC+AGG | 0.574041 | 3_3:-77379451 | Msa0474490:CDS |
AAATTCAGCTGCGGGAATTG+CGG | 0.575442 | 3_3:+77384112 | None:intergenic |
ACTACTCTGGTGGATATCGC+AGG | 0.575831 | 3_3:-77384140 | Msa0474490:CDS |
GGCTGTAGCTGTTGTAAGCG+TGG | 0.577050 | 3_3:-77379072 | Msa0474490:CDS |
TTCCCGCAGCTGAATTTCCG+TGG | 0.577989 | 3_3:-77384106 | Msa0474490:CDS |
ATCAGTGAAGAGGTACTTGG+AGG | 0.578355 | 3_3:-77393466 | Msa0474490:CDS |
TTGGAACATCTAACCTTGCG+CGG | 0.581241 | 3_3:-77379423 | Msa0474490:CDS |
CGGTGGTGCTATCACTACTC+TGG | 0.582009 | 3_3:-77384153 | Msa0474490:CDS |
ATTGAGAAGACGACACGACC+AGG | 0.583796 | 3_3:+77379378 | None:intergenic |
TTCCAGCAGCTGGATTTCCG+TGG | 0.587898 | 3_3:-77379193 | Msa0474490:CDS |
AGCATGAGACATTGATCTCG+AGG | 0.588082 | 3_3:+77386642 | None:intergenic |
ATGAAAGGTTCCAGAAACTT+GGG | 0.589410 | 3_3:+77386932 | None:intergenic |
GGAGATTGAGATTGATAACA+AGG | 0.592158 | 3_3:-77385757 | Msa0474490:CDS |
GTTACTCTGGTGGATGTGGT+AGG | 0.592542 | 3_3:-77386713 | Msa0474490:CDS |
GTCATCCACTGTTGATACAA+AGG | 0.593976 | 3_3:-77377875 | Msa0474490:three_prime_UTR |
GAAAAGAGAAGCATCGTCAA+CGG | 0.595530 | 3_3:-77379472 | Msa0474490:CDS |
GGCTGTAGCTGTTCTAAGCG+TGG | 0.595727 | 3_3:-77381592 | Msa0474490:CDS |
AGGAAAGGCCGTAGTAAGCG+TGG | 0.597410 | 3_3:-77389742 | Msa0474490:CDS |
TGGTGCTATCACTACTCTGG+TGG | 0.598552 | 3_3:-77384150 | Msa0474490:CDS |
TACAAAGGCAAAGAAGGTCG+TGG | 0.599044 | 3_3:-77377860 | Msa0474490:three_prime_UTR |
TTCAATGAGATCCAATCGCA+GGG | 0.599214 | 3_3:+77384334 | None:intergenic |
CAGACCAAGTTTGTGCTCAA+GGG | 0.602133 | 3_3:-77389701 | Msa0474490:CDS |
CAGGGTTCTAAGACTAGGAA+AGG | 0.603990 | 3_3:-77381613 | Msa0474490:CDS |
ACGGAAACTCCAGATTTCCA+CGG | 0.609103 | 3_3:+77384089 | None:intergenic |
TCAGGTACGTACTTGCACCT+TGG | 0.609189 | 3_3:-77393173 | Msa0474490:intron |
TGGTGCCATTGTTACTCTGG+TGG | 0.609784 | 3_3:-77386723 | Msa0474490:CDS |
GTTGTAAAACACAACACAGA+AGG | 0.610586 | 3_3:+77377800 | None:intergenic |
ATCGAAGATAGTAAAGATTG+GGG | 0.614601 | 3_3:-77387067 | Msa0474490:intron |
TGGATTTAGAATCAGTGAAG+AGG | 0.614768 | 3_3:-77387000 | Msa0474490:CDS |
CACATCCACCAGAGTAACAA+TGG | 0.615960 | 3_3:+77386718 | None:intergenic |
TCCTAGTCTTAGAACCCTGG+TGG | 0.616003 | 3_3:+77381617 | None:intergenic |
TAGGGTTCTACGAGTAGGAA+AGG | 0.616120 | 3_3:-77389757 | Msa0474490:CDS |
AATTCAGGTAAGTACTTGCA+CGG | 0.620247 | 3_3:-77384173 | Msa0474490:intron |
TGGTGCTATAACTACTCTGG+TGG | 0.622116 | 3_3:-77379237 | Msa0474490:CDS |
ATGGAAACTCCAGAATTCCA+CGG | 0.622816 | 3_3:+77379176 | None:intergenic |
GATAACAAGGTTCTACGAGT+AGG | 0.624009 | 3_3:-77385744 | Msa0474490:CDS |
GATGCTAGGGTTCTACGAGT+AGG | 0.625347 | 3_3:-77389762 | Msa0474490:CDS |
CAGATTTGGAATCAGTGAAG+AGG | 0.627422 | 3_3:-77393476 | Msa0474490:CDS |
AAATCCAGCTGCTGGAATTG+CGG | 0.627583 | 3_3:+77379199 | None:intergenic |
AATTCAGGTAAATACTTGCA+CGG | 0.632650 | 3_3:-77379260 | Msa0474490:intron |
GGTCGTGGAACTCTAAAGTG+TGG | 0.632941 | 3_3:-77377845 | Msa0474490:three_prime_UTR |
GGAGAAAAGACTAGCATCAA+CGG | 0.634415 | 3_3:-77384405 | Msa0474490:CDS |
GCATGAGACATTGATCTCGA+GGG | 0.635278 | 3_3:+77386643 | None:intergenic |
AGGGAAACTCCAGTATCCAT+CGG | 0.635502 | 3_3:+77386662 | None:intergenic |
ATTGAGAAGATGACACGACC+AGG | 0.637381 | 3_3:+77384311 | None:intergenic |
ACTACTCTGGTGGATATCGT+AGG | 0.639860 | 3_3:-77379227 | Msa0474490:CDS |
GCTCAATGAGATCCAATCGT+AGG | 0.645816 | 3_3:+77386900 | None:intergenic |
GCATGAGACATTGATCTCAA+CGG | 0.645982 | 3_3:+77393073 | None:intergenic |
ATCCAACTGAAATCCAGCGG+CGG | 0.646543 | 3_3:+77393106 | None:intergenic |
ACCACCAGGGTTCTAAGACT+AGG | 0.652170 | 3_3:-77381618 | Msa0474490:CDS |
TTTCCACGGAAATTCAGCTG+CGG | 0.654095 | 3_3:+77384103 | None:intergenic |
CGTGGAACTCTAAAGTGTGG+AGG | 0.657067 | 3_3:-77377842 | Msa0474490:three_prime_UTR |
AGATGTTCCAGAAACTTCGG+AGG | 0.661872 | 3_3:+77393402 | None:intergenic |
CCAGAGTAATGATGGCACCA+AGG | 0.663656 | 3_3:+77393156 | None:intergenic |
AAAGGTTCCAGAAACTTGGG+AGG | 0.690498 | 3_3:+77386935 | None:intergenic |
AGTATCCATCGGAAATCCAG+CGG | 0.693311 | 3_3:+77386673 | None:intergenic |
GGAGAAAAGAGAAACATCAA+CGG | 0.699958 | 3_3:-77386972 | Msa0474490:CDS |
TCAGGTAAGCACTTGCACGT+TGG | 0.701973 | 3_3:-77386743 | Msa0474490:intron |
ACTCTGGTGGATATCGCAGG+CGG | 0.704250 | 3_3:-77384137 | Msa0474490:CDS |
AGTATCCAACTGAAATCCAG+CGG | 0.715519 | 3_3:+77393103 | None:intergenic |
GATTGAGATTGATACCACCA+GGG | 0.729359 | 3_3:-77381631 | Msa0474490:CDS |
TGTTCATTGAGAAAACGACA+CGG | 0.782322 | 3_3:+77386873 | None:intergenic |
TGTTCATTGAGAAAACGACA+CGG | 0.782322 | 3_3:+77393340 | None:intergenic |
TCAGGTAAGTACTTGCACGG+TGG | 0.784220 | 3_3:-77384170 | Msa0474490:intron |
TCAGGTAAATACTTGCACGG+TGG | 0.802740 | 3_3:-77379257 | Msa0474490:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAAAAAAATATAAAAATT+TGG | - | chr3_3:77378582-77378601 | Msa0474490:intron | 0.0% |
!! | AAAAATATTAATAAAAATAA+TGG | - | chr3_3:77378927-77378946 | Msa0474490:intron | 0.0% |
!!! | TTTATAATTTATTTTATTTT+TGG | - | chr3_3:77391156-77391175 | Msa0474490:intron | 0.0% |
!! | TTAAAAAAATAAAAAATAAA+AGG | - | chr3_3:77392617-77392636 | Msa0474490:intron | 0.0% |
!!! | CATTAATGTTAATTTTTTTT+AGG | - | chr3_3:77378325-77378344 | Msa0474490:intron | 10.0% |
!!! | TAATTTAAAAATTGATTTTC+TGG | + | chr3_3:77379471-77379490 | None:intergenic | 10.0% |
!!! | TATTAATATTTTTCGAATAA+GGG | + | chr3_3:77378920-77378939 | None:intergenic | 10.0% |
!!! | TTATTAATATTTTTCGAATA+AGG | + | chr3_3:77378921-77378940 | None:intergenic | 10.0% |
!!! | TTCAAAATTTTTAAAAAATC+TGG | - | chr3_3:77379385-77379404 | Msa0474490:CDS | 10.0% |
!!! | CATTTATTTAATTTAAAATC+TGG | - | chr3_3:77379502-77379521 | Msa0474490:CDS | 10.0% |
!!! | AAGAAATATTAATTTTGTAT+GGG | + | chr3_3:77380372-77380391 | None:intergenic | 10.0% |
!!! | TAAGAAATATTAATTTTGTA+TGG | + | chr3_3:77380373-77380392 | None:intergenic | 10.0% |
!! | ATTAATTATTCATTTACTTT+CGG | + | chr3_3:77381250-77381269 | None:intergenic | 10.0% |
!!! | TAGCTTATTTATTTTTTATT+CGG | + | chr3_3:77382233-77382252 | None:intergenic | 10.0% |
!!! | ATTTTGTTTAAATGTATATT+TGG | + | chr3_3:77382360-77382379 | None:intergenic | 10.0% |
!! | TATTATATTTACTATATTGT+TGG | - | chr3_3:77382427-77382446 | Msa0474490:intron | 10.0% |
!!! | TTTTTAGTTCTTATAAATAT+AGG | - | chr3_3:77382796-77382815 | Msa0474490:intron | 10.0% |
!! | CAAAAATTTACTAAAAAAAT+AGG | + | chr3_3:77382899-77382918 | None:intergenic | 10.0% |
!!! | AAAAAAATTATCTTCATTTT+CGG | + | chr3_3:77383098-77383117 | None:intergenic | 10.0% |
!!! | AAAATGAAGATAATTTTTTT+TGG | - | chr3_3:77383098-77383117 | Msa0474490:intron | 10.0% |
!!! | AAATGAAGATAATTTTTTTT+GGG | - | chr3_3:77383099-77383118 | Msa0474490:intron | 10.0% |
!!! | GATTTTATTAAAGATATTAA+TGG | + | chr3_3:77383263-77383282 | None:intergenic | 10.0% |
!! | TTAAAGAAAAAATAATACTT+TGG | - | chr3_3:77383780-77383799 | Msa0474490:intron | 10.0% |
!!! | TCATTTTAAAACAATTTTTT+TGG | - | chr3_3:77383883-77383902 | Msa0474490:intron | 10.0% |
!! | TAAAAAAAACTAATATATCA+TGG | + | chr3_3:77386180-77386199 | None:intergenic | 10.0% |
!! | AATAGTATATATATAAAGTA+AGG | - | chr3_3:77387421-77387440 | Msa0474490:intron | 10.0% |
!!! | TGATATTAAATTTTGATAAT+TGG | - | chr3_3:77389434-77389453 | Msa0474490:intron | 10.0% |
!! | GAAATAATAATTGAATATAA+TGG | - | chr3_3:77390116-77390135 | Msa0474490:intron | 10.0% |
!! | AAAAATTGAACAAATTTATT+CGG | - | chr3_3:77390184-77390203 | Msa0474490:intron | 10.0% |
!!! | TCAAAACAAAATATTTTTTT+GGG | + | chr3_3:77390484-77390503 | None:intergenic | 10.0% |
!!! | AAAATTAGAATTTTTTAACA+AGG | + | chr3_3:77390560-77390579 | None:intergenic | 10.0% |
!! | ATAAAAAATTGATATAAAGA+AGG | + | chr3_3:77391591-77391610 | None:intergenic | 10.0% |
!!! | TTCTTTATATCAATTTTTTA+TGG | - | chr3_3:77391590-77391609 | Msa0474490:intron | 10.0% |
!!! | AAAGTGATTTTTTTTTAATA+GGG | + | chr3_3:77392451-77392470 | None:intergenic | 10.0% |
!!! | AAAAGTGATTTTTTTTTAAT+AGG | + | chr3_3:77392452-77392471 | None:intergenic | 10.0% |
!! | AATAAAAAATAAAAGGAAAA+AGG | - | chr3_3:77392624-77392643 | Msa0474490:intron | 10.0% |
!!! | TTTTCGTTTTTTAAAAAATC+TGG | + | chr3_3:77378733-77378752 | None:intergenic | 15.0% |
!! | AAAAATTTCACAAAAATTCA+CGG | - | chr3_3:77378880-77378899 | Msa0474490:intron | 15.0% |
!! | ATGGAAAAATATTTAAATTC+TGG | - | chr3_3:77378946-77378965 | Msa0474490:intron | 15.0% |
!! | AAAAATTTCACAAAAATTCA+TGG | - | chr3_3:77378880-77378899 | Msa0474490:intron | 15.0% |
!!! | GGAAATTTTTTTAAAAAATC+TGG | + | chr3_3:77379357-77379376 | None:intergenic | 15.0% |
!!! | TTAAGGGTATAATAAAAAAA+AGG | + | chr3_3:77379813-77379832 | None:intergenic | 15.0% |
!! | AACAACAAAAAAATTGTTAA+GGG | + | chr3_3:77379829-77379848 | None:intergenic | 15.0% |
!!! | TCTAAAACGTTTTATAATTT+AGG | - | chr3_3:77380407-77380426 | Msa0474490:intron | 15.0% |
!! | TCTCATAATTATAATGAAAA+AGG | + | chr3_3:77380718-77380737 | None:intergenic | 15.0% |
!!! | GATATTAAATTGATAATTAG+AGG | - | chr3_3:77381312-77381331 | Msa0474490:intron | 15.0% |
!!! | ATCAAATTCTAGTTTTTTTT+AGG | - | chr3_3:77381955-77381974 | Msa0474490:intron | 15.0% |
!!! | TCAAATTCTAGTTTTTTTTA+GGG | - | chr3_3:77381956-77381975 | Msa0474490:intron | 15.0% |
!!! | TATTTCTTAATTTTTTGAAG+AGG | + | chr3_3:77382000-77382019 | None:intergenic | 15.0% |
!! | ATTGCATATAAATATATTGT+TGG | - | chr3_3:77382378-77382397 | Msa0474490:intron | 15.0% |
!!! | TTGATTTTGTTGAAAATTAT+AGG | + | chr3_3:77382625-77382644 | None:intergenic | 15.0% |
!!! | AAATTTTCAATCACTATTTA+TGG | - | chr3_3:77382871-77382890 | Msa0474490:intron | 15.0% |
!!! | AATGAAGATAATTTTTTTTG+GGG | - | chr3_3:77383100-77383119 | Msa0474490:intron | 15.0% |
!! | GTTCATTTATTAAATGTATT+TGG | + | chr3_3:77383618-77383637 | None:intergenic | 15.0% |
!!! | ATGAAAAACCAATTTTAATT+GGG | + | chr3_3:77384673-77384692 | None:intergenic | 15.0% |
!!! | AATGAAAAACCAATTTTAAT+TGG | + | chr3_3:77384674-77384693 | None:intergenic | 15.0% |
!! | TATTATTTAGAAACGAAAAA+GGG | + | chr3_3:77384837-77384856 | None:intergenic | 15.0% |
!! | ATATTATTTAGAAACGAAAA+AGG | + | chr3_3:77384838-77384857 | None:intergenic | 15.0% |
!! | AAAGAAAAATTAGTGTTTAA+GGG | + | chr3_3:77384911-77384930 | None:intergenic | 15.0% |
!! | AAAAGAAAAATTAGTGTTTA+AGG | + | chr3_3:77384912-77384931 | None:intergenic | 15.0% |
!! | CAAATTTAATACAAAAAACA+AGG | + | chr3_3:77385353-77385372 | None:intergenic | 15.0% |
!!! | GATATTTGTACAATTAATTT+TGG | + | chr3_3:77385910-77385929 | None:intergenic | 15.0% |
!!! | GATAAAAAAAATAGTCATTT+TGG | + | chr3_3:77386544-77386563 | None:intergenic | 15.0% |
!!! | AATGACTATTTTTTTTATCA+AGG | - | chr3_3:77386545-77386564 | Msa0474490:intron | 15.0% |
!!! | ATGACTATTTTTTTTATCAA+GGG | - | chr3_3:77386546-77386565 | Msa0474490:intron | 15.0% |
!!! | CATTTGGTTAATATTTTAAA+GGG | + | chr3_3:77386589-77386608 | None:intergenic | 15.0% |
!!! | AAGTTTTTATTAATTGCATT+TGG | + | chr3_3:77386605-77386624 | None:intergenic | 15.0% |
!! | AAATGCAATTAATAAAAACT+TGG | - | chr3_3:77386604-77386623 | Msa0474490:intron | 15.0% |
!!! | AATTTTTGTAATTAGTTGTA+TGG | - | chr3_3:77387210-77387229 | Msa0474490:intron | 15.0% |
!! | AATTTAAAGAAAATATTGAG+TGG | + | chr3_3:77387548-77387567 | None:intergenic | 15.0% |
!! | CTAAAAACAAATAAACAAAT+TGG | + | chr3_3:77387740-77387759 | None:intergenic | 15.0% |
!!! | CAATTTGTTTATTTGTTTTT+AGG | - | chr3_3:77387738-77387757 | Msa0474490:intron | 15.0% |
!! | ATAATTAACCCTAATAAAAT+TGG | + | chr3_3:77388037-77388056 | None:intergenic | 15.0% |
!! | AATGCTATTAAAATTAAGTA+GGG | + | chr3_3:77388514-77388533 | None:intergenic | 15.0% |
!! | AAATGCTATTAAAATTAAGT+AGG | + | chr3_3:77388513-77388532 | None:intergenic | 15.0% |
!!! | AATTTTGCAATAATTTTTTG+AGG | + | chr3_3:77388257-77388276 | None:intergenic | 15.0% |
!! | AGATAAAAAGTAATAAAATC+TGG | + | chr3_3:77388292-77388311 | None:intergenic | 15.0% |
!! | TTCAAAAATTTAAGAGTTTA+AGG | - | chr3_3:77388423-77388442 | Msa0474490:intron | 15.0% |
!! | AAATGCTATTAAAATTAAGT+AGG | - | chr3_3:77388513-77388532 | Msa0474490:intron | 15.0% |
!! | AATGCTATTAAAATTAAGTA+GGG | - | chr3_3:77388514-77388533 | Msa0474490:intron | 15.0% |
!! | TGTATGAGAAATAATAAAAT+GGG | + | chr3_3:77388588-77388607 | None:intergenic | 15.0% |
!! | ATGTATGAGAAATAATAAAA+TGG | + | chr3_3:77388589-77388608 | None:intergenic | 15.0% |
!! | AAACTTATTTAATATCTAAC+CGG | - | chr3_3:77388947-77388966 | Msa0474490:intron | 15.0% |
!!! | TATTAAATTTTGATAATTGG+AGG | - | chr3_3:77389437-77389456 | Msa0474490:intron | 15.0% |
!!! | AGTTTTAATTAATAACAAGT+TGG | - | chr3_3:77389933-77389952 | Msa0474490:intron | 15.0% |
!!! | TAATGTGTCTAAATTTTAAA+TGG | - | chr3_3:77390288-77390307 | Msa0474490:intron | 15.0% |
!! | GAAAAATTTGTAGATTAATA+GGG | + | chr3_3:77390331-77390350 | None:intergenic | 15.0% |
!! | AGAAAAATTTGTAGATTAAT+AGG | + | chr3_3:77390332-77390351 | None:intergenic | 15.0% |
!!! | GTCAAAACAAAATATTTTTT+TGG | + | chr3_3:77390485-77390504 | None:intergenic | 15.0% |
!!! | ATGAATTTTTAAATTTTTGG+CGG | + | chr3_3:77390525-77390544 | None:intergenic | 15.0% |
!! | TATATATGAGTTTACTTAAA+AGG | - | chr3_3:77390643-77390662 | Msa0474490:intron | 15.0% |
!! | TGATAAGTTAATATATTTAC+TGG | - | chr3_3:77390734-77390753 | Msa0474490:intron | 15.0% |
!! | GATAAGTTAATATATTTACT+GGG | - | chr3_3:77390735-77390754 | Msa0474490:intron | 15.0% |
!! | TTAACAAAATGTAACAAATT+TGG | - | chr3_3:77391196-77391215 | Msa0474490:intron | 15.0% |
!!! | AAGTGATTTTTTTTTAATAG+GGG | + | chr3_3:77392450-77392469 | None:intergenic | 15.0% |
!! | AAACAAACAATAGATTAAAT+GGG | - | chr3_3:77392760-77392779 | Msa0474490:intron | 15.0% |
!! | AACATTAATGATATTGCAAA+GGG | + | chr3_3:77378315-77378334 | None:intergenic | 20.0% |
!! | TAACATTAATGATATTGCAA+AGG | + | chr3_3:77378316-77378335 | None:intergenic | 20.0% |
!! | TAATTAATTAATTACACACG+TGG | + | chr3_3:77379635-77379654 | None:intergenic | 20.0% |
!! | TTGAAAATTTGACATTCTAA+AGG | + | chr3_3:77379248-77379267 | None:intergenic | 20.0% |
!!! | GAAAATTCTGTAAAAGATTT+TGG | - | chr3_3:77379273-77379292 | Msa0474490:intron | 20.0% |
!! | TAATTAATTAATTACACACG+TGG | - | chr3_3:77379635-77379654 | Msa0474490:intron | 20.0% |
!!! | AAGTTTGAAAACTACAATTT+TGG | + | chr3_3:77379736-77379755 | None:intergenic | 20.0% |
!!! | AAATTGTAGTTTTCAAACTT+AGG | - | chr3_3:77379736-77379755 | Msa0474490:intron | 20.0% |
!!! | AATTGTAGTTTTCAAACTTA+GGG | - | chr3_3:77379737-77379756 | Msa0474490:intron | 20.0% |
!! | CAACAACAAAAAAATTGTTA+AGG | + | chr3_3:77379830-77379849 | None:intergenic | 20.0% |
!! | AAAAAAACACTTGATATATG+TGG | - | chr3_3:77380163-77380182 | Msa0474490:intron | 20.0% |
!! | GAAAGAAATGAAAAAATAGA+CGG | - | chr3_3:77380204-77380223 | Msa0474490:intron | 20.0% |
!!! | AAACGTTTTATAATTTAGGA+CGG | - | chr3_3:77380411-77380430 | Msa0474490:intron | 20.0% |
!!! | GGTCTTAATATTTGTTAAAT+AGG | + | chr3_3:77380467-77380486 | None:intergenic | 20.0% |
!! | AAGTACTACAATAAAAACTA+GGG | + | chr3_3:77380488-77380507 | None:intergenic | 20.0% |
!! | TAAGTACTACAATAAAAACT+AGG | + | chr3_3:77380489-77380508 | None:intergenic | 20.0% |
!!! | ACTATTTTTTTGACAACTTT+TGG | - | chr3_3:77380753-77380772 | Msa0474490:intron | 20.0% |
!!! | ATGATATTTTGACATCTATT+TGG | + | chr3_3:77380894-77380913 | None:intergenic | 20.0% |
!!! | AAATTGATAATTAGAGGAAT+AGG | - | chr3_3:77381318-77381337 | Msa0474490:intron | 20.0% |
!!! | TGGTTTTTTTGTATTAGATT+TGG | - | chr3_3:77381353-77381372 | Msa0474490:intron | 20.0% |
!!! | GGTTTTTTTGTATTAGATTT+GGG | - | chr3_3:77381354-77381373 | Msa0474490:intron | 20.0% |
!! | GTATGTATAAATAATTGTGT+AGG | - | chr3_3:77381563-77381582 | Msa0474490:CDS | 20.0% |
!!! | TTTTTTAGGGAAATTCTTTT+TGG | - | chr3_3:77381969-77381988 | Msa0474490:intron | 20.0% |
!!! | CTATACTAATTACATGATTT+TGG | - | chr3_3:77382318-77382337 | Msa0474490:intron | 20.0% |
!! | TATCATATTAGCTATATTGT+TGG | - | chr3_3:77382542-77382561 | Msa0474490:intron | 20.0% |
!!! | AGTTGAAGAAATTTTTTAGA+GGG | + | chr3_3:77382838-77382857 | None:intergenic | 20.0% |
!!! | AAGTTGAAGAAATTTTTTAG+AGG | + | chr3_3:77382839-77382858 | None:intergenic | 20.0% |
!!! | ATGAAGATAATTTTTTTTGG+GGG | - | chr3_3:77383101-77383120 | Msa0474490:intron | 20.0% |
!!! | AATTGGAAGAAATTTTTTAG+AGG | - | chr3_3:77383130-77383149 | Msa0474490:intron | 20.0% |
!!! | ATTGGAAGAAATTTTTTAGA+GGG | - | chr3_3:77383131-77383150 | Msa0474490:intron | 20.0% |
!! | GAAAAGTTGTCATATTTATA+GGG | - | chr3_3:77383162-77383181 | Msa0474490:intron | 20.0% |
!!! | ACATTTTGTTTACAATCTTT+AGG | - | chr3_3:77383410-77383429 | Msa0474490:intron | 20.0% |
!! | ATAAGATAAGATAACATGAA+TGG | + | chr3_3:77383527-77383546 | None:intergenic | 20.0% |
!!! | GTTTCAAAACTAAGATTTTA+TGG | + | chr3_3:77383569-77383588 | None:intergenic | 20.0% |
!! | AAATCAATAGTTAGTTGATT+AGG | + | chr3_3:77383752-77383771 | None:intergenic | 20.0% |
!! | TGTAACATAGTATTAATTGA+AGG | - | chr3_3:77383809-77383828 | Msa0474490:intron | 20.0% |
!! | GTAACATAGTATTAATTGAA+GGG | - | chr3_3:77383810-77383829 | Msa0474490:intron | 20.0% |
!!! | AAACGACATTTATTTTGAAA+CGG | - | chr3_3:77383909-77383928 | Msa0474490:intron | 20.0% |
!! | TTGGATTTGATATATATAGT+TGG | - | chr3_3:77383959-77383978 | Msa0474490:intron | 20.0% |
!! | AAGAAGAAAGATAATAAAGA+AGG | + | chr3_3:77384021-77384040 | None:intergenic | 20.0% |
!! | TCATAATTATATCATGACAA+TGG | + | chr3_3:77384105-77384124 | None:intergenic | 20.0% |
!! | GCGTGTTAATTAAATAATTA+AGG | + | chr3_3:77384430-77384449 | None:intergenic | 20.0% |
!! | ATAATTGTCCCAATTAAAAT+TGG | - | chr3_3:77384662-77384681 | Msa0474490:intron | 20.0% |
!! | CGTTTCTAAATAATATTCAT+TGG | - | chr3_3:77384842-77384861 | Msa0474490:intron | 20.0% |
!!! | ATTAGTCTAGACTAAATAAA+TGG | + | chr3_3:77385019-77385038 | None:intergenic | 20.0% |
!! | TATTTAGTCTAGACTAATAA+AGG | - | chr3_3:77385021-77385040 | Msa0474490:intron | 20.0% |
!! | ATTTAGTCTAGACTAATAAA+GGG | - | chr3_3:77385022-77385041 | Msa0474490:intron | 20.0% |
!! | ACAGATGTAAAAAAATTGAA+AGG | + | chr3_3:77385291-77385310 | None:intergenic | 20.0% |
!!! | TTTTTTTGTTTAATTCCCTA+TGG | - | chr3_3:77385401-77385420 | Msa0474490:intron | 20.0% |
!!! | TTTTTATTGGACAAAAACAA+TGG | + | chr3_3:77385862-77385881 | None:intergenic | 20.0% |
!!! | ACAACTATTTCTCTTTTTAT+TGG | + | chr3_3:77385875-77385894 | None:intergenic | 20.0% |
!! | TCTTTGTAAACATAGATAAT+TGG | - | chr3_3:77385940-77385959 | Msa0474490:intron | 20.0% |
!! | AATACATTCATTTACTATTG+TGG | + | chr3_3:77386257-77386276 | None:intergenic | 20.0% |
!!! | AACAAAATATTTTAACACGA+GGG | + | chr3_3:77386321-77386340 | None:intergenic | 20.0% |
!!! | TAACAAAATATTTTAACACG+AGG | + | chr3_3:77386322-77386341 | None:intergenic | 20.0% |
!!! | AAAATAGTCATTTTGGTTAA+TGG | + | chr3_3:77386537-77386556 | None:intergenic | 20.0% |
!!! | TGACTATTTTTTTTATCAAG+GGG | - | chr3_3:77386547-77386566 | Msa0474490:intron | 20.0% |
!!! | GCATTTGGTTAATATTTTAA+AGG | + | chr3_3:77386590-77386609 | None:intergenic | 20.0% |
!! | AAATTGAAAATGTTGTTAGA+AGG | + | chr3_3:77387342-77387361 | None:intergenic | 20.0% |
!!! | TCAATTAGTTTTTATGTTTG+AGG | - | chr3_3:77387808-77387827 | Msa0474490:intron | 20.0% |
!! | TTTATGTTTGAGGAAAAAAA+AGG | - | chr3_3:77387818-77387837 | Msa0474490:intron | 20.0% |
!! | AAAAATGTTAGATGAAAAGA+AGG | + | chr3_3:77387992-77388011 | None:intergenic | 20.0% |
!! | AAACAAATTTGAATTGAGTA+GGG | + | chr3_3:77388162-77388181 | None:intergenic | 20.0% |
!! | TAAACAAATTTGAATTGAGT+AGG | + | chr3_3:77388163-77388182 | None:intergenic | 20.0% |
!! | AACTTATTTAATATCTAACC+GGG | - | chr3_3:77388948-77388967 | Msa0474490:intron | 20.0% |
!! | ATATGTACAAATAATTGTGA+AGG | - | chr3_3:77389724-77389743 | Msa0474490:CDS | 20.0% |
!!! | AATGCTTTAAAGAAGTTTAA+AGG | - | chr3_3:77389809-77389828 | Msa0474490:intron | 20.0% |
!!! | ATGCTTTAAAGAAGTTTAAA+GGG | - | chr3_3:77389810-77389829 | Msa0474490:intron | 20.0% |
!!! | TCAGAATAAATAGTCATTTT+GGG | + | chr3_3:77389901-77389920 | None:intergenic | 20.0% |
!!! | TTCAGAATAAATAGTCATTT+TGG | + | chr3_3:77389902-77389921 | None:intergenic | 20.0% |
!!! | TAAATGGTTAAATGTGTTTT+TGG | - | chr3_3:77390304-77390323 | Msa0474490:intron | 20.0% |
!!! | TGATGATTGAAAATTTTGTA+AGG | + | chr3_3:77390367-77390386 | None:intergenic | 20.0% |
!!! | AAACAAAATATTTTTTTGGG+AGG | + | chr3_3:77390481-77390500 | None:intergenic | 20.0% |
!! | AAAGTCAAGAAAATATTTAG+AGG | - | chr3_3:77390704-77390723 | Msa0474490:intron | 20.0% |
!!! | GAATTTGGTCATTTAAAATT+GGG | + | chr3_3:77390778-77390797 | None:intergenic | 20.0% |
!!! | TGAATTTGGTCATTTAAAAT+TGG | + | chr3_3:77390779-77390798 | None:intergenic | 20.0% |
!!! | TGTTTTGTAATCTTTGAATT+TGG | + | chr3_3:77390793-77390812 | None:intergenic | 20.0% |
!! | TGTATTTCATGATAATATAG+AGG | - | chr3_3:77390855-77390874 | Msa0474490:intron | 20.0% |
!!! | AAGTTTGCCTATTTTTTAAA+GGG | + | chr3_3:77391225-77391244 | None:intergenic | 20.0% |
!! | TTTCTTTGTACCAAAAATAA+AGG | + | chr3_3:77391335-77391354 | None:intergenic | 20.0% |
!!! | TTTAATCAAATGCTTTAGAT+TGG | - | chr3_3:77391372-77391391 | Msa0474490:intron | 20.0% |
!!! | TTAATCAAATGCTTTAGATT+GGG | - | chr3_3:77391373-77391392 | Msa0474490:intron | 20.0% |
!! | GCGAATTAATTAGTTAATAT+TGG | + | chr3_3:77391916-77391935 | None:intergenic | 20.0% |
!!! | TTTCACATTTTACTTACAAA+GGG | + | chr3_3:77392211-77392230 | None:intergenic | 20.0% |
!!! | GGAATATTTTATTTGAATCA+TGG | + | chr3_3:77392295-77392314 | None:intergenic | 20.0% |
!! | GAGAAATAATGAATGTTAAA+TGG | + | chr3_3:77392316-77392335 | None:intergenic | 20.0% |
!!! | TTTAACATTCATTATTTCTC+AGG | - | chr3_3:77392316-77392335 | Msa0474490:intron | 20.0% |
!!! | CAATCTTGTAATTTTCTTAT+TGG | - | chr3_3:77392386-77392405 | Msa0474490:intron | 20.0% |
!!! | AGTGATTTTTTTTTAATAGG+GGG | + | chr3_3:77392449-77392468 | None:intergenic | 20.0% |
!! | AAAATAAAAGGAAAAAGGAA+TGG | - | chr3_3:77392629-77392648 | Msa0474490:intron | 20.0% |
!! | CAAACAAACAATAGATTAAA+TGG | - | chr3_3:77392759-77392778 | Msa0474490:intron | 20.0% |
! | ACAACCTGTAATTTGAATTT+GGG | + | chr3_3:77378260-77378279 | None:intergenic | 25.0% |
! | AACAACCTGTAATTTGAATT+TGG | + | chr3_3:77378261-77378280 | None:intergenic | 25.0% |
!!! | AATTGTAGTTTTCAAGCTTA+GGG | + | chr3_3:77378401-77378420 | None:intergenic | 25.0% |
!!! | AAATTGTAGTTTTCAAGCTT+AGG | + | chr3_3:77378402-77378421 | None:intergenic | 25.0% |
!! | AAGCTTGAAAACTACAATTT+TGG | - | chr3_3:77378402-77378421 | Msa0474490:intron | 25.0% |
! | AAAATGACCAAATATGCAAA+GGG | + | chr3_3:77378444-77378463 | None:intergenic | 25.0% |
!!! | TTTTTCGAATAAGTGATTCT+TGG | + | chr3_3:77379116-77379135 | None:intergenic | 25.0% |
! | TATTCGAAAAAGTAATGTCA+TGG | - | chr3_3:77379125-77379144 | Msa0474490:CDS | 25.0% |
! | TTGGTACATATTTCTTCTTT+AGG | + | chr3_3:77379164-77379183 | None:intergenic | 25.0% |
! | AGAAATATGTACCAAATTTG+TGG | - | chr3_3:77379169-77379188 | Msa0474490:CDS | 25.0% |
! | AAAAGGACTAAATATGCAAA+GGG | - | chr3_3:77379694-77379713 | Msa0474490:intron | 25.0% |
!! | ATTGTAGTTTTCAAACTTAG+GGG | - | chr3_3:77379738-77379757 | Msa0474490:intron | 25.0% |
! | AACATAGCTAAAAACTTGAA+GGG | - | chr3_3:77379905-77379924 | Msa0474490:intron | 25.0% |
! | TGAAAGAAATGAGAGTAATA+AGG | + | chr3_3:77380279-77380298 | None:intergenic | 25.0% |
! | TTCTTATTGGTCAAAAACAA+TGG | + | chr3_3:77380838-77380857 | None:intergenic | 25.0% |
! | AATATGAAAGATAGTTAGAG+AGG | - | chr3_3:77380934-77380953 | Msa0474490:intron | 25.0% |
! | AATTCTCAATAAATGACCAA+TGG | + | chr3_3:77381158-77381177 | None:intergenic | 25.0% |
! | AATTATTCTCTCTGTTATGT+GGG | + | chr3_3:77381211-77381230 | None:intergenic | 25.0% |
! | TAATTATTCTCTCTGTTATG+TGG | + | chr3_3:77381212-77381231 | None:intergenic | 25.0% |
! | ACATCATGTAAAACATTGAA+AGG | + | chr3_3:77381279-77381298 | None:intergenic | 25.0% |
! | TTACAAAATATCTTCCCTTT+AGG | - | chr3_3:77381524-77381543 | Msa0474490:CDS | 25.0% |
!! | ATTCACATTTTACTCCTAAA+GGG | + | chr3_3:77381541-77381560 | None:intergenic | 25.0% |
!! | TATTCACATTTTACTCCTAA+AGG | + | chr3_3:77381542-77381561 | None:intergenic | 25.0% |
! | AAGGTCTTGAAAGAAAATAA+CGG | + | chr3_3:77381616-77381635 | None:intergenic | 25.0% |
!! | TTATTTTCTTTCAAGACCTT+TGG | - | chr3_3:77381616-77381635 | Msa0474490:CDS | 25.0% |
! | GATTTAGAAATAATGAGATG+TGG | - | chr3_3:77381900-77381919 | Msa0474490:intron | 25.0% |
! | TACATACGAGTTTACTTTAA+AGG | - | chr3_3:77383067-77383086 | Msa0474490:intron | 25.0% |
!!! | TGAAGATAATTTTTTTTGGG+GGG | - | chr3_3:77383102-77383121 | Msa0474490:intron | 25.0% |
! | CGAAAAGTTGTCATATTTAT+AGG | - | chr3_3:77383161-77383180 | Msa0474490:intron | 25.0% |
!! | ATCATCTTGCATAATTGTTT+TGG | - | chr3_3:77383324-77383343 | Msa0474490:intron | 25.0% |
!!! | TTGAGTTGTAATTTTGTCAT+AGG | - | chr3_3:77383451-77383470 | Msa0474490:intron | 25.0% |
! | TAAGATAACATGAATGGTTA+CGG | + | chr3_3:77383521-77383540 | None:intergenic | 25.0% |
! | GTTAGTTGATTAGGATAATT+TGG | + | chr3_3:77383743-77383762 | None:intergenic | 25.0% |
! | AATCGAAGATAGTAAAGATT+GGG | - | chr3_3:77384130-77384149 | Msa0474490:CDS | 25.0% |
! | TGATTAACGATAATACAAGA+GGG | + | chr3_3:77384625-77384644 | None:intergenic | 25.0% |
! | ATGATTAACGATAATACAAG+AGG | + | chr3_3:77384626-77384645 | None:intergenic | 25.0% |
!!! | AAATAAATGGTCGTTTTCTT+CGG | + | chr3_3:77385006-77385025 | None:intergenic | 25.0% |
! | TCATAAAAAAGAGTTTGTCT+GGG | + | chr3_3:77385081-77385100 | None:intergenic | 25.0% |
! | ATCATAAAAAAGAGTTTGTC+TGG | + | chr3_3:77385082-77385101 | None:intergenic | 25.0% |
! | AAGTTTCAATGAATGACTAA+TGG | + | chr3_3:77385172-77385191 | None:intergenic | 25.0% |
! | GATATCAAATTGATCATTAG+AGG | - | chr3_3:77385311-77385330 | Msa0474490:intron | 25.0% |
!! | ATTCACATTTTACTGACAAA+GGG | + | chr3_3:77385565-77385584 | None:intergenic | 25.0% |
! | ATGTATACAAGTAATTGTGA+AGG | - | chr3_3:77385583-77385602 | Msa0474490:intron | 25.0% |
!! | AATGTTTTCTATAGGTTCAA+AGG | - | chr3_3:77385659-77385678 | Msa0474490:CDS | 25.0% |
!! | ATGTTTTCTATAGGTTCAAA+GGG | - | chr3_3:77385660-77385679 | Msa0474490:CDS | 25.0% |
! | TCTATGTTTACAAAGATTAG+AGG | + | chr3_3:77385936-77385955 | None:intergenic | 25.0% |
!! | CACTTTTATCTGATTGTTTT+AGG | - | chr3_3:77386055-77386074 | Msa0474490:intron | 25.0% |
!!! | CTATTGTTTTGTCTAATAAG+TGG | + | chr3_3:77386154-77386173 | None:intergenic | 25.0% |
! | TTTCAAAACAATCCTTGATA+AGG | + | chr3_3:77386478-77386497 | None:intergenic | 25.0% |
! | CTACATTGTAAAAAAACTGA+AGG | - | chr3_3:77386699-77386718 | Msa0474490:CDS | 25.0% |
! | AATAGAATGGAAAAAACAGA+AGG | - | chr3_3:77386734-77386753 | Msa0474490:CDS | 25.0% |
! | ATTAGATGTTGCAAAAACTT+GGG | + | chr3_3:77386836-77386855 | None:intergenic | 25.0% |
!! | GCGAATTAATGAATTAGTTT+AGG | + | chr3_3:77387003-77387022 | None:intergenic | 25.0% |
!!! | ATTAAGCTTTGAAATACACT+AGG | + | chr3_3:77378172-77378191 | None:intergenic | 25.0% |
! | AAAAATATTGAGAATGAACG+TGG | + | chr3_3:77387455-77387474 | None:intergenic | 25.0% |
! | AGTGCAGAAAAACAAAATTA+GGG | + | chr3_3:77388129-77388148 | None:intergenic | 25.0% |
!!! | TAATCAAACTTTGTTTTAGC+AGG | - | chr3_3:77388451-77388470 | Msa0474490:intron | 25.0% |
!!! | AATCAAACTTTGTTTTAGCA+GGG | - | chr3_3:77388452-77388471 | Msa0474490:intron | 25.0% |
! | GAGAGAAAAATTGATTGAAA+GGG | + | chr3_3:77388705-77388724 | None:intergenic | 25.0% |
! | AGAGAGAAAAATTGATTGAA+AGG | + | chr3_3:77388706-77388725 | None:intergenic | 25.0% |
!! | TTATAACTAGTTTATAGACC+CGG | + | chr3_3:77388979-77388998 | None:intergenic | 25.0% |
! | CTATCAGATTCAATAAGAAA+TGG | + | chr3_3:77389132-77389151 | None:intergenic | 25.0% |
!!! | ACTCCTTTCAATTTTTTACA+TGG | - | chr3_3:77389388-77389407 | Msa0474490:intron | 25.0% |
! | ACACCATGTAAAAAATTGAA+AGG | + | chr3_3:77389394-77389413 | None:intergenic | 25.0% |
!!! | ATTTTGATAATTGGAGGAAT+AGG | - | chr3_3:77389443-77389462 | Msa0474490:intron | 25.0% |
!!! | GGAATAGGATATTTTTTTAC+TGG | - | chr3_3:77389458-77389477 | Msa0474490:intron | 25.0% |
!! | AGTTATTTCCAAAGGTAAAA+AGG | + | chr3_3:77389782-77389801 | None:intergenic | 25.0% |
!!! | TTTTACCTTTGGAAATAACT+TGG | - | chr3_3:77389782-77389801 | Msa0474490:intron | 25.0% |
! | TAATGGTTTGATTAAGATTG+CGG | - | chr3_3:77390133-77390152 | Msa0474490:intron | 25.0% |
!! | AATTTTGTAAGGACTAAAAG+TGG | + | chr3_3:77390356-77390375 | None:intergenic | 25.0% |
!! | AAATTTTCAATCATCACTGT+TGG | - | chr3_3:77390371-77390390 | Msa0474490:intron | 25.0% |
!! | AAGTTTTTCATCTTCACTTT+TGG | + | chr3_3:77390674-77390693 | None:intergenic | 25.0% |
!! | AAGTGAAGATGAAAAACTTT+TGG | - | chr3_3:77390675-77390694 | Msa0474490:intron | 25.0% |
!! | AGTGAAGATGAAAAACTTTT+GGG | - | chr3_3:77390676-77390695 | Msa0474490:intron | 25.0% |
! | ATTCAAAGATTACAAAACAG+AGG | - | chr3_3:77390794-77390813 | Msa0474490:intron | 25.0% |
! | TTCAAAGATTACAAAACAGA+GGG | - | chr3_3:77390795-77390814 | Msa0474490:intron | 25.0% |
!!! | GAATTTTGATGATGTTTACT+CGG | - | chr3_3:77390891-77390910 | Msa0474490:intron | 25.0% |
! | TCCAACGAAATACAATATTT+AGG | - | chr3_3:77391001-77391020 | Msa0474490:intron | 25.0% |
! | AAAGCCAAAACAATTATACA+AGG | + | chr3_3:77391068-77391087 | None:intergenic | 25.0% |
!!! | TGTATAATTGTTTTGGCTTT+TGG | - | chr3_3:77391068-77391087 | Msa0474490:intron | 25.0% |
!!! | CAAGTTTGCCTATTTTTTAA+AGG | + | chr3_3:77391226-77391245 | None:intergenic | 25.0% |
!! | CTTTAAAAAATAGGCAAACT+TGG | - | chr3_3:77391224-77391243 | Msa0474490:intron | 25.0% |
!!! | TTACATCGTTCCTTTATTTT+TGG | - | chr3_3:77391322-77391341 | Msa0474490:intron | 25.0% |
! | AACAAACGAAAAAAACAGAA+TGG | - | chr3_3:77391654-77391673 | Msa0474490:intron | 25.0% |
! | ACAAACGAAAAAAACAGAAT+GGG | - | chr3_3:77391655-77391674 | Msa0474490:intron | 25.0% |
! | AAGAAAATGAAGAATAGTGT+AGG | + | chr3_3:77391876-77391895 | None:intergenic | 25.0% |
! | ACTTACAAAGGGAATATATT+TGG | + | chr3_3:77392200-77392219 | None:intergenic | 25.0% |
!! | GTTTCACATTTTACTTACAA+AGG | + | chr3_3:77392212-77392231 | None:intergenic | 25.0% |
!! | CTATTGTTTGTTTGTGTTTT+TGG | + | chr3_3:77392753-77392772 | None:intergenic | 25.0% |
! | AATTTCAGAAGCTTCTTTAA+GGG | + | chr3_3:77392873-77392892 | None:intergenic | 25.0% |
! | AAATTTCAGAAGCTTCTTTA+AGG | + | chr3_3:77392874-77392893 | None:intergenic | 25.0% |
!! | TTGTGTTTTACAACTTATTG+TGG | - | chr3_3:77393407-77393426 | Msa0474490:CDS | 25.0% |
ATTAGATGTTCCAGAAACTT+CGG | + | chr3_3:77377802-77377821 | None:intergenic | 30.0% | |
!! | TTTCTGGAACATCTAATCTT+GGG | - | chr3_3:77377805-77377824 | Msa0474490:three_prime_UTR | 30.0% |
!! | TGAATTAACTTGCAGAATTC+AGG | - | chr3_3:77378007-77378026 | Msa0474490:intron | 30.0% |
!! | AGCTTTGAAATACACTAACA+TGG | + | chr3_3:77378168-77378187 | None:intergenic | 30.0% |
TAATTTGAATTTGGGAAGGA+GGG | + | chr3_3:77378252-77378271 | None:intergenic | 30.0% | |
!! | TCGCAACTTTTTGAAAGATA+GGG | + | chr3_3:77379768-77379787 | None:intergenic | 30.0% |
!! | ATCGCAACTTTTTGAAAGAT+AGG | + | chr3_3:77379767-77379786 | None:intergenic | 30.0% |
! | CTTTCAAAAAGTTGCGATTT+TGG | - | chr3_3:77378373-77378392 | Msa0474490:intron | 30.0% |
!! | ATTGTAGTTTTCAAGCTTAG+GGG | + | chr3_3:77378400-77378419 | None:intergenic | 30.0% |
AAATGACCAAATATGCAAAG+GGG | + | chr3_3:77378443-77378462 | None:intergenic | 30.0% | |
CAAAATGACCAAATATGCAA+AGG | + | chr3_3:77378445-77378464 | None:intergenic | 30.0% | |
! | CTTTGCATATTTGGTCATTT+TGG | - | chr3_3:77378443-77378462 | Msa0474490:intron | 30.0% |
!! | TTTTTCGAATAAGGGATTCT+TGG | + | chr3_3:77378912-77378931 | None:intergenic | 30.0% |
! | CTTTGCATATTTAGTCCTTT+TGG | + | chr3_3:77379695-77379714 | None:intergenic | 30.0% |
CAAAAGGACTAAATATGCAA+AGG | - | chr3_3:77379693-77379712 | Msa0474490:intron | 30.0% | |
AAAGGACTAAATATGCAAAG+GGG | - | chr3_3:77379695-77379714 | Msa0474490:intron | 30.0% | |
! | TTGTAGTTTTCAAACTTAGG+GGG | - | chr3_3:77379739-77379758 | Msa0474490:intron | 30.0% |
! | CTTTCAAAAAGTTGCGATTT+TGG | + | chr3_3:77378373-77378392 | None:intergenic | 30.0% |
!! | ATCGCAACTTTTTGAAAGAT+AGG | - | chr3_3:77379767-77379786 | Msa0474490:intron | 30.0% |
!! | TCGCAACTTTTTGAAAGATA+GGG | - | chr3_3:77379768-77379787 | Msa0474490:intron | 30.0% |
CAACATAGCTAAAAACTTGA+AGG | - | chr3_3:77379904-77379923 | Msa0474490:intron | 30.0% | |
! | TTTAATTTCGCGTCTTGTTA+CGG | + | chr3_3:77380086-77380105 | None:intergenic | 30.0% |
AAAACAATGGAGAGAGAAAA+AGG | + | chr3_3:77380825-77380844 | None:intergenic | 30.0% | |
!!! | TTGTTTTTCTGGCTTCTTAT+TGG | + | chr3_3:77380851-77380870 | None:intergenic | 30.0% |
AATAAGAAGCCAGAAAAACA+AGG | - | chr3_3:77380850-77380869 | Msa0474490:intron | 30.0% | |
TCTAGAAAAACTGAAAACGA+TGG | - | chr3_3:77380968-77380987 | Msa0474490:intron | 30.0% | |
TCATAACAAAGAGTTTGTCT+TGG | + | chr3_3:77381050-77381069 | None:intergenic | 30.0% | |
! | GGAATAGGATATTCTTTTAC+TGG | - | chr3_3:77381333-77381352 | Msa0474490:intron | 30.0% |
TTTGTATTAGATTTGGGTGA+TGG | - | chr3_3:77381360-77381379 | Msa0474490:intron | 30.0% | |
TTGTATTAGATTTGGGTGAT+GGG | - | chr3_3:77381361-77381380 | Msa0474490:intron | 30.0% | |
!!! | CAACAGTTTTGTTTATGCAA+TGG | - | chr3_3:77381395-77381414 | Msa0474490:intron | 30.0% |
!!! | AGTTTTGTTTATGCAATGGT+AGG | - | chr3_3:77381399-77381418 | Msa0474490:intron | 30.0% |
! | TTTGCAGTAATGTTTTCTAG+AGG | - | chr3_3:77381647-77381666 | Msa0474490:intron | 30.0% |
!! | AATGTTTTCTAGAGGTTCAA+AGG | - | chr3_3:77381655-77381674 | Msa0474490:intron | 30.0% |
!! | ATGTTTTCTAGAGGTTCAAA+GGG | - | chr3_3:77381656-77381675 | Msa0474490:intron | 30.0% |
ATGAATTGTTTCAGAGTGAA+TGG | + | chr3_3:77381761-77381780 | None:intergenic | 30.0% | |
!!! | CAATCATTTTTTGTTGCTCA+AGG | + | chr3_3:77381850-77381869 | None:intergenic | 30.0% |
CTTGAGCAACAAAAAATGAT+TGG | - | chr3_3:77381848-77381867 | Msa0474490:intron | 30.0% | |
AGCAACAAAAAATGATTGGA+TGG | - | chr3_3:77381852-77381871 | Msa0474490:intron | 30.0% | |
AACAAAAAATGATTGGATGG+AGG | - | chr3_3:77381855-77381874 | Msa0474490:intron | 30.0% | |
AACACAAGATGAAGATATGA+GGG | - | chr3_3:77381927-77381946 | Msa0474490:intron | 30.0% | |
TTATTCCCTTCGATTCTTAT+AGG | - | chr3_3:77382763-77382782 | Msa0474490:intron | 30.0% | |
TATTCCCTTCGATTCTTATA+GGG | - | chr3_3:77382764-77382783 | Msa0474490:intron | 30.0% | |
TTAACCCTATAAGAATCGAA+GGG | + | chr3_3:77382771-77382790 | None:intergenic | 30.0% | |
TTTAACCCTATAAGAATCGA+AGG | + | chr3_3:77382772-77382791 | None:intergenic | 30.0% | |
! | ATACGAGTTTACTTTAAAGG+AGG | - | chr3_3:77383070-77383089 | Msa0474490:intron | 30.0% |
! | TACGAGTTTACTTTAAAGGA+GGG | - | chr3_3:77383071-77383090 | Msa0474490:intron | 30.0% |
AAACAAAATGTTAGCATGCA+AGG | + | chr3_3:77383352-77383371 | None:intergenic | 30.0% | |
AACGCCAAAACAAATATACA+AGG | + | chr3_3:77383479-77383498 | None:intergenic | 30.0% | |
!!! | TGTATATTTGTTTTGGCGTT+TGG | - | chr3_3:77383479-77383498 | Msa0474490:intron | 30.0% |
!! | AAGCGACACTCATTTTAAAA+CGG | + | chr3_3:77383660-77383679 | None:intergenic | 30.0% |
ATTGCACACAGATTAATGAA+TGG | - | chr3_3:77383686-77383705 | Msa0474490:intron | 30.0% | |
!!! | GACATTTATTTTGAAACGGA+TGG | - | chr3_3:77383913-77383932 | Msa0474490:intron | 30.0% |
GGATGGAGTATAAAAAAACT+TGG | - | chr3_3:77383930-77383949 | Msa0474490:intron | 30.0% | |
TAAAAAAACTTGGCTTAGCT+TGG | - | chr3_3:77383940-77383959 | Msa0474490:intron | 30.0% | |
GAATCGAAGATAGTAAAGAT+TGG | - | chr3_3:77384129-77384148 | Msa0474490:CDS | 30.0% | |
ATCGAAGATAGTAAAGATTG+GGG | - | chr3_3:77384131-77384150 | Msa0474490:CDS | 30.0% | |
AAAAAGTGAAGGAAGAAGAA+TGG | - | chr3_3:77384154-77384173 | Msa0474490:CDS | 30.0% | |
AGAAGAATGGAAAAAAGAGA+AGG | - | chr3_3:77384167-77384186 | Msa0474490:CDS | 30.0% | |
AAAAAGAGAAGGAACGATTA+TGG | - | chr3_3:77384178-77384197 | Msa0474490:intron | 30.0% | |
TTAATTAACACGCAGAATTC+AGG | - | chr3_3:77384437-77384456 | Msa0474490:CDS | 30.0% | |
GCTATGAAACAAACTAACAT+TGG | + | chr3_3:77384597-77384616 | None:intergenic | 30.0% | |
GATTAACGATAATACAAGAG+GGG | + | chr3_3:77384624-77384643 | None:intergenic | 30.0% | |
GAATTAGCATATGTGCTTAA+TGG | + | chr3_3:77384723-77384742 | None:intergenic | 30.0% | |
!! | ATAATATTCATTGGCTTGTC+AGG | - | chr3_3:77384851-77384870 | Msa0474490:intron | 30.0% |
!! | TAATATTCATTGGCTTGTCA+GGG | - | chr3_3:77384852-77384871 | Msa0474490:intron | 30.0% |
!! | AATAAATGGTCGTTTTCTTC+GGG | + | chr3_3:77385005-77385024 | None:intergenic | 30.0% |
TTCTCATATTCAATTAGCAG+TGG | + | chr3_3:77385113-77385132 | None:intergenic | 30.0% | |
GCTAATTGAATATGAGAATG+AGG | - | chr3_3:77385115-77385134 | Msa0474490:intron | 30.0% | |
! | TACATTACTGTTAGCTTAGT+GGG | + | chr3_3:77385226-77385245 | None:intergenic | 30.0% |
! | ATACATTACTGTTAGCTTAG+TGG | + | chr3_3:77385227-77385246 | None:intergenic | 30.0% |
AGAGTTCAGAAAGAAAAAGA+CGG | - | chr3_3:77385501-77385520 | Msa0474490:intron | 30.0% | |
! | CATTCACATTTTACTGACAA+AGG | + | chr3_3:77385566-77385585 | None:intergenic | 30.0% |
GAACCTATAGAAAACATTAC+TGG | + | chr3_3:77385657-77385676 | None:intergenic | 30.0% | |
! | TACTACTTTGTTTCGCAATT+TGG | + | chr3_3:77385974-77385993 | None:intergenic | 30.0% |
ATTGCGAAACAAAGTAGTAA+AGG | - | chr3_3:77385975-77385994 | Msa0474490:intron | 30.0% | |
AACAAAGTAGTAAAGGATAG+AGG | - | chr3_3:77385982-77386001 | Msa0474490:intron | 30.0% | |
AATTTGGATGTGCATAATCA+AGG | + | chr3_3:77386296-77386315 | None:intergenic | 30.0% | |
CCTTGATAAGGTTTGATATA+GGG | + | chr3_3:77386466-77386485 | None:intergenic | 30.0% | |
TCCTTGATAAGGTTTGATAT+AGG | + | chr3_3:77386467-77386486 | None:intergenic | 30.0% | |
!!! | AGTCATTTTGGTTAATGGAA+CGG | + | chr3_3:77386532-77386551 | None:intergenic | 30.0% |
AATAAAAACTTGGCTTAGCT+TGG | - | chr3_3:77386614-77386633 | Msa0474490:intron | 30.0% | |
GATTATAAAGACCACTTTAC+TGG | + | chr3_3:77386662-77386681 | None:intergenic | 30.0% | |
TGTAAAAAAACTGAAGGAAG+AGG | - | chr3_3:77386705-77386724 | Msa0474490:CDS | 30.0% | |
GATTAGATGTTGCAAAAACT+TGG | + | chr3_3:77386837-77386856 | None:intergenic | 30.0% | |
TTCATTAATTCGCAGAATTC+AGG | - | chr3_3:77387010-77387029 | Msa0474490:CDS | 30.0% | |
TTAGTTGTATGGCAGATAAA+TGG | - | chr3_3:77387221-77387240 | Msa0474490:intron | 30.0% | |
TTAGATGAAAAGAAGGTTTG+GGG | + | chr3_3:77387985-77388004 | None:intergenic | 30.0% | |
GTTAGATGAAAAGAAGGTTT+GGG | + | chr3_3:77387986-77388005 | None:intergenic | 30.0% | |
TGTTAGATGAAAAGAAGGTT+TGG | + | chr3_3:77387987-77388006 | None:intergenic | 30.0% | |
! | TCTAACATTTTTCCTTCTTC+AGG | - | chr3_3:77388000-77388019 | Msa0474490:intron | 30.0% |
! | TGGCAAACACCAATTTTATT+AGG | - | chr3_3:77388025-77388044 | Msa0474490:intron | 30.0% |
! | GGCAAACACCAATTTTATTA+GGG | - | chr3_3:77388026-77388045 | Msa0474490:intron | 30.0% |
!! | TACAAGGTCGCTATTTTATA+GGG | + | chr3_3:77388545-77388564 | None:intergenic | 30.0% |
!! | TTACAAGGTCGCTATTTTAT+AGG | + | chr3_3:77388544-77388563 | None:intergenic | 30.0% |
CAGTGCAGAAAAACAAAATT+AGG | + | chr3_3:77388130-77388149 | None:intergenic | 30.0% | |
CAAGATTAGAACACTATGAA+AGG | + | chr3_3:77388389-77388408 | None:intergenic | 30.0% | |
!! | TTACAAGGTCGCTATTTTAT+AGG | - | chr3_3:77388544-77388563 | Msa0474490:intron | 30.0% |
!! | TACAAGGTCGCTATTTTATA+GGG | - | chr3_3:77388545-77388564 | Msa0474490:intron | 30.0% |
CAATAATGAATTAGTCCAAG+TGG | + | chr3_3:77388790-77388809 | None:intergenic | 30.0% | |
TCATAACAAAGAGTTTGTCT+TGG | + | chr3_3:77381050-77381069 | None:intergenic | 30.0% | |
CAACATAATTGCCAAAATGA+AGG | - | chr3_3:77389176-77389195 | Msa0474490:intron | 30.0% | |
! | ACTCAAAAGAACCTTCATTT+TGG | + | chr3_3:77389190-77389209 | None:intergenic | 30.0% |
AAGCTTCAATAAATGACCAA+TGG | + | chr3_3:77389218-77389237 | None:intergenic | 30.0% | |
AATTATTCACTCTGTTGTGT+CGG | + | chr3_3:77389275-77389294 | None:intergenic | 30.0% | |
!! | TTAAGGGGAAGATATTTTAG+GGG | + | chr3_3:77389691-77389710 | None:intergenic | 30.0% |
! | CTTAAGGGGAAGATATTTTA+GGG | + | chr3_3:77389692-77389711 | None:intergenic | 30.0% |
TAAAGAAGTTTAAAGGGTGA+TGG | - | chr3_3:77389816-77389835 | Msa0474490:intron | 30.0% | |
!!! | TTTTTTTCCTTCAGATTCGT+CGG | - | chr3_3:77390215-77390234 | Msa0474490:intron | 30.0% |
! | CATGAGTTGACTTAAAAACA+TGG | + | chr3_3:77390398-77390417 | None:intergenic | 30.0% |
! | GTGAAGATGAAAAACTTTTG+GGG | - | chr3_3:77390677-77390696 | Msa0474490:intron | 30.0% |
ATGATAATATAGAGGATGCA+TGG | - | chr3_3:77390863-77390882 | Msa0474490:intron | 30.0% | |
GCCTAAATATTGTATTTCGT+TGG | + | chr3_3:77391005-77391024 | None:intergenic | 30.0% | |
! | GACACCTTGTATAATTGTTT+TGG | - | chr3_3:77391061-77391080 | Msa0474490:intron | 30.0% |
TAAAAAGCTTTCATAGCACA+AGG | + | chr3_3:77391140-77391159 | None:intergenic | 30.0% | |
! | TTGGCTTCCCTTTAAAAAAT+AGG | - | chr3_3:77391215-77391234 | Msa0474490:intron | 30.0% |
TTCTTCCTGTTTGTTTCAAA+AGG | + | chr3_3:77391440-77391459 | None:intergenic | 30.0% | |
TTACCAAGTTATTCAAACAG+AGG | - | chr3_3:77391545-77391564 | Msa0474490:intron | 30.0% | |
TACCAAGTTATTCAAACAGA+GGG | - | chr3_3:77391546-77391565 | Msa0474490:intron | 30.0% | |
CTAATTAATTCGCAGAATTC+AGG | - | chr3_3:77391923-77391942 | Msa0474490:intron | 30.0% | |
AATTCAGGTAAATACTTGCA+CGG | - | chr3_3:77391938-77391957 | Msa0474490:intron | 30.0% | |
GCATGAAATATTGATCTCAA+TGG | + | chr3_3:77392044-77392063 | None:intergenic | 30.0% | |
! | TAGAGTTTTACGAATAGGAA+AGG | - | chr3_3:77392105-77392124 | Msa0474490:intron | 30.0% |
! | TTCATTATTTCTCAGGTGAT+AGG | - | chr3_3:77392323-77392342 | Msa0474490:intron | 30.0% |
TAATTCATAAAATACACGCG+TGG | + | chr3_3:77392600-77392619 | None:intergenic | 30.0% | |
GTTGAAGTGACTTTAATATG+AGG | + | chr3_3:77392726-77392745 | None:intergenic | 30.0% | |
ACTCAGATCTAACAATTTAG+TGG | - | chr3_3:77392807-77392826 | Msa0474490:intron | 30.0% | |
!! | AGGGTTTCTATGTTTGATTT+TGG | + | chr3_3:77392854-77392873 | None:intergenic | 30.0% |
!!! | ATCGTGATTGTAGTTTTAAC+TGG | - | chr3_3:77392964-77392983 | Msa0474490:intron | 30.0% |
ATGAAGAATGTGAAGATCAA+TGG | - | chr3_3:77392991-77393010 | Msa0474490:intron | 30.0% | |
AATCAGAAAAAGAGAGATTG+AGG | + | chr3_3:77393089-77393108 | None:intergenic | 30.0% | |
AATTCAGAAACACTTGAAGA+TGG | - | chr3_3:77393199-77393218 | Msa0474490:intron | 30.0% | |
TAAATTTCCTCCGAAGTTTC+TGG | - | chr3_3:77377789-77377808 | Msa0474490:three_prime_UTR | 35.0% | |
!! | GTTTCTGGAACATCTAATCT+TGG | - | chr3_3:77377804-77377823 | Msa0474490:three_prime_UTR | 35.0% |
TGTTCATTGAGAAAACGACA+CGG | + | chr3_3:77377861-77377880 | None:intergenic | 35.0% | |
ACGTCTTGAGTATGTTAAAC+AGG | + | chr3_3:77378226-77378245 | None:intergenic | 35.0% | |
GTAATTTGAATTTGGGAAGG+AGG | + | chr3_3:77378253-77378272 | None:intergenic | 35.0% | |
CCTGTAATTTGAATTTGGGA+AGG | + | chr3_3:77378256-77378275 | None:intergenic | 35.0% | |
CCTTCCCAAATTCAAATTAC+AGG | - | chr3_3:77378253-77378272 | Msa0474490:intron | 35.0% | |
!! | GCAACTTTTTGAAAGATAGG+GGG | + | chr3_3:77379770-77379789 | None:intergenic | 35.0% |
!! | CGCAACTTTTTGAAAGATAG+GGG | + | chr3_3:77379769-77379788 | None:intergenic | 35.0% |
!! | TTGTAGTTTTCAAGCTTAGG+GGG | + | chr3_3:77378399-77378418 | None:intergenic | 35.0% |
! | TTTTAGCCCCTTTGCATATT+TGG | - | chr3_3:77378434-77378453 | Msa0474490:intron | 35.0% |
ATACAACTTGGCCACAAATT+TGG | + | chr3_3:77379183-77379202 | None:intergenic | 35.0% | |
CTTGGTCAAAATTGACCAAA+AGG | - | chr3_3:77379677-77379696 | Msa0474490:intron | 35.0% | |
!! | CGCAACTTTTTGAAAGATAG+GGG | - | chr3_3:77379769-77379788 | Msa0474490:intron | 35.0% |
!! | GCAACTTTTTGAAAGATAGG+GGG | - | chr3_3:77379770-77379789 | Msa0474490:intron | 35.0% |
AAAAGGCTAAAGTGCAACTT+TGG | + | chr3_3:77379796-77379815 | None:intergenic | 35.0% | |
CACAGATGCAATCAATGATT+TGG | + | chr3_3:77380023-77380042 | None:intergenic | 35.0% | |
ATGAGAAAAAAGATGCAGAG+AGG | - | chr3_3:77380232-77380251 | Msa0474490:intron | 35.0% | |
!! | CGTTTTATAATTTAGGACGG+AGG | - | chr3_3:77380414-77380433 | Msa0474490:intron | 35.0% |
GCTTAATGAAGATGCATTGA+CGG | + | chr3_3:77380583-77380602 | None:intergenic | 35.0% | |
!!! | TGTTGACAACCTTGTTTTTC+TGG | + | chr3_3:77380862-77380881 | None:intergenic | 35.0% |
CTATCAGATTCAATAAGCAG+TGG | + | chr3_3:77381084-77381103 | None:intergenic | 35.0% | |
! | GCTTATTGAATCTGATAGTG+AGG | - | chr3_3:77381086-77381105 | Msa0474490:intron | 35.0% |
GAACATAATTGCCAGAATGA+AGG | - | chr3_3:77381121-77381140 | Msa0474490:intron | 35.0% | |
TTTGTTTATGCAATGGTAGG+AGG | - | chr3_3:77381402-77381421 | Msa0474490:intron | 35.0% | |
ACTGCAAAGTTCATTTCCAA+AGG | + | chr3_3:77381635-77381654 | None:intergenic | 35.0% | |
CAACACAAGATGAAGATATG+AGG | - | chr3_3:77381926-77381945 | Msa0474490:intron | 35.0% | |
AAGATCATGAAGTACAAGAC+TGG | - | chr3_3:77382064-77382083 | Msa0474490:intron | 35.0% | |
AGATCATGAAGTACAAGACT+GGG | - | chr3_3:77382065-77382084 | Msa0474490:intron | 35.0% | |
!!! | GGTTGTTTTTGTGGTTTACT+GGG | + | chr3_3:77382105-77382124 | None:intergenic | 35.0% |
AATTCGTTGTATCCCAGTTA+CGG | + | chr3_3:77382127-77382146 | None:intergenic | 35.0% | |
! | TATATACGCGTTTTATCGCT+CGG | + | chr3_3:77382486-77382505 | None:intergenic | 35.0% |
!!! | GAGTTTTGATGACGTTTACT+AGG | - | chr3_3:77382719-77382738 | Msa0474490:intron | 35.0% |
!!! | TTTTTTGGGGGGACTAAAAT+TGG | - | chr3_3:77383113-77383132 | Msa0474490:intron | 35.0% |
TGCGATGTGTATATAAGAGA+TGG | + | chr3_3:77383205-77383224 | None:intergenic | 35.0% | |
! | GGCACCTTGTATATTTGTTT+TGG | - | chr3_3:77383472-77383491 | Msa0474490:intron | 35.0% |
!!! | AGCGACACTCATTTTAAAAC+GGG | + | chr3_3:77383659-77383678 | None:intergenic | 35.0% |
AAAGATTGGGGAAAAAGTGA+AGG | - | chr3_3:77384143-77384162 | Msa0474490:CDS | 35.0% | |
! | TGGATTTAGAATCAGTGAAG+AGG | - | chr3_3:77384198-77384217 | Msa0474490:intron | 35.0% |
!! | AGAATCAGTGAAGAGGTATT+TGG | - | chr3_3:77384205-77384224 | Msa0474490:intron | 35.0% |
GGAGAAAAGAGAAACATCAA+CGG | - | chr3_3:77384226-77384245 | Msa0474490:intron | 35.0% | |
ATGAAAGGTTCCAGAAACTT+GGG | + | chr3_3:77384269-77384288 | None:intergenic | 35.0% | |
TGTTCATTGAGAAAACGACA+CGG | + | chr3_3:77377861-77377880 | None:intergenic | 35.0% | |
AAGCAAGAAGAAGAAGATTG+AGG | + | chr3_3:77384379-77384398 | None:intergenic | 35.0% | |
!! | CTTCTTCTTGCTTTTGATGA+TGG | - | chr3_3:77384386-77384405 | Msa0474490:CDS | 35.0% |
AAGTGAAGCTATACATAGAG+AGG | - | chr3_3:77384752-77384771 | Msa0474490:intron | 35.0% | |
! | ACATTACTGTTAGCTTAGTG+GGG | + | chr3_3:77385225-77385244 | None:intergenic | 35.0% |
ATTCCCTATGGCTTATGTAA+TGG | - | chr3_3:77385413-77385432 | Msa0474490:intron | 35.0% | |
CTACCATTACATAAGCCATA+GGG | + | chr3_3:77385419-77385438 | None:intergenic | 35.0% | |
! | GGAGATTGAGATTGATAACA+AGG | - | chr3_3:77385441-77385460 | Msa0474490:intron | 35.0% |
GAGTTCAGAAAGAAAAAGAC+GGG | - | chr3_3:77385502-77385521 | Msa0474490:intron | 35.0% | |
ACTGACAAAGGGAAGATATT+TGG | + | chr3_3:77385554-77385573 | None:intergenic | 35.0% | |
GTCTTGAAAAAACACCTATC+AGG | + | chr3_3:77385616-77385635 | None:intergenic | 35.0% | |
!!! | AGGTGTTTTTTCAAGACCTT+TGG | - | chr3_3:77385619-77385638 | Msa0474490:intron | 35.0% |
! | AAGACCTTTGGAAATGAACT+TGG | - | chr3_3:77381628-77381647 | Msa0474490:CDS | 35.0% |
! | TGGCCAGTAATGTTTTCTAT+AGG | - | chr3_3:77385651-77385670 | Msa0474490:CDS | 35.0% |
! | TTTTCTATAGGTTCAAAGGG+TGG | - | chr3_3:77385663-77385682 | Msa0474490:CDS | 35.0% |
TTTCTATAGGTTCAAAGGGT+GGG | - | chr3_3:77385664-77385683 | Msa0474490:CDS | 35.0% | |
! | TCGATGATCTTTTGTCCTTT+TGG | + | chr3_3:77385719-77385738 | None:intergenic | 35.0% |
AAAAGGACAAAAGATCATCG+AGG | - | chr3_3:77385718-77385737 | Msa0474490:CDS | 35.0% | |
GGTGTAGCTACATTAATCTT+TGG | - | chr3_3:77385739-77385758 | Msa0474490:CDS | 35.0% | |
!! | ATACGCGTCGATTACTATAT+AGG | - | chr3_3:77386117-77386136 | Msa0474490:intron | 35.0% |
! | TTTTAACACGAGGGACAATT+TGG | + | chr3_3:77386312-77386331 | None:intergenic | 35.0% |
CCCTATATCAAACCTTATCA+AGG | - | chr3_3:77386463-77386482 | Msa0474490:intron | 35.0% | |
!!! | GTCATTTTGGTTAATGGAAC+GGG | + | chr3_3:77386531-77386550 | None:intergenic | 35.0% |
AAAAACTGAAGGAAGAGGAA+AGG | - | chr3_3:77386710-77386729 | Msa0474490:CDS | 35.0% | |
GAAGAGGAAAGGAAATAGAA+TGG | - | chr3_3:77386721-77386740 | Msa0474490:CDS | 35.0% | |
AAAAACAGAAGGAACGATAC+CGG | - | chr3_3:77386745-77386764 | Msa0474490:intron | 35.0% | |
!! | TTCTTCACTGATTCCAAATC+CGG | + | chr3_3:77386767-77386786 | None:intergenic | 35.0% |
AATTCAGGTAAGTACTTGCA+CGG | - | chr3_3:77387025-77387044 | Msa0474490:CDS | 35.0% | |
GCATGAGATATTGATCTCAA+CGG | + | chr3_3:77387131-77387150 | None:intergenic | 35.0% | |
TGAGATCAATATCTCATGCT+TGG | - | chr3_3:77387132-77387151 | Msa0474490:intron | 35.0% | |
GTGAATTAGCAAATGTGCAA+TGG | + | chr3_3:77387296-77387315 | None:intergenic | 35.0% | |
!! | CATTTTTCCTTCTTCAGGTT+TGG | - | chr3_3:77388005-77388024 | Msa0474490:intron | 35.0% |
AAGTAGGGACTAAACTTACA+AGG | + | chr3_3:77388529-77388548 | None:intergenic | 35.0% | |
AAGTAGGGACTAAACTTACA+AGG | - | chr3_3:77388529-77388548 | Msa0474490:intron | 35.0% | |
! | ATTTTTCTCTCTCATACGCA+TGG | - | chr3_3:77388714-77388733 | Msa0474490:intron | 35.0% |
! | TTTTTCTCTCTCATACGCAT+GGG | - | chr3_3:77388715-77388734 | Msa0474490:intron | 35.0% |
ACTCATGACCACATGTTTAA+AGG | - | chr3_3:77388749-77388768 | Msa0474490:intron | 35.0% | |
CTCATGACCACATGTTTAAA+GGG | - | chr3_3:77388750-77388769 | Msa0474490:intron | 35.0% | |
TTTGAGTCCCTTTAAACATG+TGG | + | chr3_3:77388760-77388779 | None:intergenic | 35.0% | |
TGAGATGAATGTTCAATGCA+AGG | + | chr3_3:77388832-77388851 | None:intergenic | 35.0% | |
! | TCTTATTGAATCTGATAGCG+AGG | - | chr3_3:77389134-77389153 | Msa0474490:intron | 35.0% |
!!! | TTCTTTTGAGTTCTGACCAT+TGG | - | chr3_3:77389199-77389218 | Msa0474490:intron | 35.0% |
GAGTTGAGGAAGAAAAAAAC+TGG | - | chr3_3:77389628-77389647 | Msa0474490:intron | 35.0% | |
! | TGCTACATCCTTTTTACCTT+TGG | - | chr3_3:77389771-77389790 | Msa0474490:CDS | 35.0% |
! | TACTGCCAAGTTATTTCCAA+AGG | + | chr3_3:77389790-77389809 | None:intergenic | 35.0% |
TGATTAAGATTGCGGATGAT+AGG | - | chr3_3:77390141-77390160 | Msa0474490:intron | 35.0% | |
AGTTCTTATGCCCCAAATAA+AGG | - | chr3_3:77390250-77390269 | Msa0474490:intron | 35.0% | |
! | ATAGCCCTACTCCTTTATTT+GGG | + | chr3_3:77390264-77390283 | None:intergenic | 35.0% |
AATAGCCCTACTCCTTTATT+TGG | + | chr3_3:77390265-77390284 | None:intergenic | 35.0% | |
!!! | GAACACCTTTTGAAACAAAC+AGG | - | chr3_3:77391432-77391451 | Msa0474490:intron | 35.0% |
! | TCTTGTCTTCTTTTTCTGAC+TGG | - | chr3_3:77391481-77391500 | Msa0474490:intron | 35.0% |
ACCAAGTTATTCAAACAGAG+GGG | - | chr3_3:77391547-77391566 | Msa0474490:intron | 35.0% | |
ATGGTGAAGAAAAAGCTGTA+AGG | - | chr3_3:77391609-77391628 | Msa0474490:intron | 35.0% | |
AGCTGTAAGGTAAAAGTCAA+TGG | - | chr3_3:77391622-77391641 | Msa0474490:intron | 35.0% | |
GTAAGGTAAAAGTCAATGGT+TGG | - | chr3_3:77391626-77391645 | Msa0474490:intron | 35.0% | |
GTTCAATGAGATCCAATTGT+AGG | + | chr3_3:77391801-77391820 | None:intergenic | 35.0% | |
! | GATGCTAGAGTTTTACGAAT+AGG | - | chr3_3:77392100-77392119 | Msa0474490:intron | 35.0% |
AAATGTGAAACTGAGACCAA+AGG | - | chr3_3:77392221-77392240 | Msa0474490:intron | 35.0% | |
ATACATCTTCTACTGTCCTT+TGG | + | chr3_3:77392240-77392259 | None:intergenic | 35.0% | |
GAAGATGTATGAACTTTCTG+AGG | - | chr3_3:77392250-77392269 | Msa0474490:intron | 35.0% | |
TATTTCTCAGGTGATAGGAT+CGG | - | chr3_3:77392328-77392347 | Msa0474490:intron | 35.0% | |
! | GATAGGATCGGATTTTTATC+AGG | - | chr3_3:77392340-77392359 | Msa0474490:intron | 35.0% |
!! | TGTTAGCTTAAACGCACTTT+TGG | - | chr3_3:77392423-77392442 | Msa0474490:intron | 35.0% |
TTGACTCAGTCAAAATCAAG+GGG | + | chr3_3:77392513-77392532 | None:intergenic | 35.0% | |
! | GTTGACTCAGTCAAAATCAA+GGG | + | chr3_3:77392514-77392533 | None:intergenic | 35.0% |
TAATATGAGGAGATGGAAGA+AGG | + | chr3_3:77392713-77392732 | None:intergenic | 35.0% | |
GTGACTTTAATATGAGGAGA+TGG | + | chr3_3:77392720-77392739 | None:intergenic | 35.0% | |
!!! | GTTTGTTTGTGTTTTTGGTG+TGG | + | chr3_3:77392748-77392767 | None:intergenic | 35.0% |
CAGATCTAACAATTTAGTGG+TGG | - | chr3_3:77392810-77392829 | Msa0474490:intron | 35.0% | |
! | TTCTGTTTCTTTCTCTGAGT+GGG | + | chr3_3:77392925-77392944 | None:intergenic | 35.0% |
! | TTTCTGTTTCTTTCTCTGAG+TGG | + | chr3_3:77392926-77392945 | None:intergenic | 35.0% |
CAGAAATCTCGAAGAAACAA+TGG | - | chr3_3:77392940-77392959 | Msa0474490:intron | 35.0% | |
AAGAATGTGAAGATCAATGG+CGG | - | chr3_3:77392994-77393013 | Msa0474490:intron | 35.0% | |
TCAGAGATGAGTATGATAGT+TGG | + | chr3_3:77393261-77393280 | None:intergenic | 35.0% | |
TCTCAATTGCACATCTATTG+CGG | + | chr3_3:77393293-77393312 | None:intergenic | 35.0% | |
TGTTGATACAAAGGCAAAGA+AGG | - | chr3_3:77393332-77393351 | Msa0474490:CDS | 35.0% | |
GTTGTAAAACACAACACAGA+AGG | + | chr3_3:77393401-77393420 | None:intergenic | 35.0% | |
GTTGCTTGTAATCTAAGAGA+TGG | - | chr3_3:77393470-77393489 | Msa0474490:CDS | 35.0% | |
GTAATCTAAGAGATGGTTCT+TGG | - | chr3_3:77393477-77393496 | Msa0474490:CDS | 35.0% | |
! | CAGATTTGGAATCAGTGAAG+AGG | - | chr3_3:77377722-77377741 | Msa0474490:three_prime_UTR | 40.0% |
AGTATCCAACTGAAATCCAG+CGG | + | chr3_3:77378098-77378117 | None:intergenic | 40.0% | |
GCATGAGACATTGATCTCAA+CGG | + | chr3_3:77378128-77378147 | None:intergenic | 40.0% | |
TGAGATCAATGTCTCATGCT+TGG | - | chr3_3:77378129-77378148 | Msa0474490:intron | 40.0% | |
GCAAAGGGGCTAAAACATAA+GGG | + | chr3_3:77378429-77378448 | None:intergenic | 40.0% | |
TGCAAAGGGGCTAAAACATA+AGG | + | chr3_3:77378430-77378449 | None:intergenic | 40.0% | |
ATACCGACGAGAATACAACT+TGG | + | chr3_3:77379195-77379214 | None:intergenic | 40.0% | |
! | TTTGACATTCTAAAGGCGCA+AGG | + | chr3_3:77379241-77379260 | None:intergenic | 40.0% |
ATGCAAAGGGGCTAAAAGAT+AGG | - | chr3_3:77379707-77379726 | Msa0474490:intron | 40.0% | |
TGCAAAGGGGCTAAAAGATA+GGG | - | chr3_3:77379708-77379727 | Msa0474490:intron | 40.0% | |
! | ATTCGAGAGCATAGGTATTC+TGG | + | chr3_3:77379985-77380004 | None:intergenic | 40.0% |
AGAGAGAAAAAGGAAGAGAG+AGG | + | chr3_3:77380815-77380834 | None:intergenic | 40.0% | |
ACTCAGAAGAACCTTCATTC+TGG | + | chr3_3:77381135-77381154 | None:intergenic | 40.0% | |
AGGAGATTGAGATTGATGCT+AGG | - | chr3_3:77381422-77381441 | Msa0474490:intron | 40.0% | |
GGAGATTGAGATTGATGCTA+GGG | - | chr3_3:77381423-77381442 | Msa0474490:intron | 40.0% | |
!! | TTTTCTAGAGGTTCAAAGGG+TGG | - | chr3_3:77381659-77381678 | Msa0474490:intron | 40.0% |
! | TTTCTAGAGGTTCAAAGGGT+GGG | - | chr3_3:77381660-77381679 | Msa0474490:intron | 40.0% |
! | TCATTTTGAGCTGTACCTCT+TGG | + | chr3_3:77381738-77381757 | None:intergenic | 40.0% |
GGATGGAGGAAAGAAATAGA+AGG | - | chr3_3:77381869-77381888 | Msa0474490:intron | 40.0% | |
GATCATGAAGTACAAGACTG+GGG | - | chr3_3:77382066-77382085 | Msa0474490:intron | 40.0% | |
!!! | GGGTTGTTTTTGTGGTTTAC+TGG | + | chr3_3:77382106-77382125 | None:intergenic | 40.0% |
CACAAAAACAACCCGTAACT+GGG | - | chr3_3:77382112-77382131 | Msa0474490:intron | 40.0% | |
ATTCGTTGTATCCCAGTTAC+GGG | + | chr3_3:77382126-77382145 | None:intergenic | 40.0% | |
GGATACAACGAATTAGCACA+TGG | - | chr3_3:77382133-77382152 | Msa0474490:intron | 40.0% | |
TACAACGAATTAGCACATGG+TGG | - | chr3_3:77382136-77382155 | Msa0474490:intron | 40.0% | |
! | GCTCTAAACAATCACTACCA+CGG | - | chr3_3:77382175-77382194 | Msa0474490:intron | 40.0% |
GATGAAAGGTTCCAGAAACT+TGG | + | chr3_3:77384270-77384289 | None:intergenic | 40.0% | |
CCTACCATTACATAAGCCAT+AGG | + | chr3_3:77385420-77385439 | None:intergenic | 40.0% | |
CCTATGGCTTATGTAATGGT+AGG | - | chr3_3:77385417-77385436 | Msa0474490:intron | 40.0% | |
ATGGCTTATGTAATGGTAGG+AGG | - | chr3_3:77385420-77385439 | Msa0474490:intron | 40.0% | |
GATAACAAGGTTCTACGAGT+AGG | - | chr3_3:77385454-77385473 | Msa0474490:intron | 40.0% | |
ACATGTGAGTATGAGAGAGA+GGG | + | chr3_3:77385810-77385829 | None:intergenic | 40.0% | |
CAGAAACACTGTTCTGTCAA+CGG | - | chr3_3:77386014-77386033 | Msa0474490:intron | 40.0% | |
! | AACTTGGCTTAGCTTGGATT+TGG | - | chr3_3:77383946-77383965 | Msa0474490:intron | 40.0% |
!! | GGAATCAGTGAAGAAGTACT+TGG | - | chr3_3:77386772-77386791 | Msa0474490:intron | 40.0% |
GGAGAAAAGACTAGCATCAA+CGG | - | chr3_3:77386793-77386812 | Msa0474490:intron | 40.0% | |
AGATGTTGCAAAAACTTGGG+AGG | + | chr3_3:77386833-77386852 | None:intergenic | 40.0% | |
TTCAATGAGATCCAATCGCA+GGG | + | chr3_3:77386867-77386886 | None:intergenic | 40.0% | |
! | TTTTCTCTCTCATACGCATG+GGG | - | chr3_3:77388716-77388735 | Msa0474490:intron | 40.0% |
GACTCAAAACTCTTACCACT+TGG | - | chr3_3:77388772-77388791 | Msa0474490:intron | 40.0% | |
AGCTAGTTAGCTGAAAACGA+TGG | - | chr3_3:77389017-77389036 | Msa0474490:intron | 40.0% | |
TCCTACCATTGCATAAGCAA+CGG | + | chr3_3:77389544-77389563 | None:intergenic | 40.0% | |
AGATTGAGATTGATACCACC+AGG | - | chr3_3:77389566-77389585 | Msa0474490:intron | 40.0% | |
GATTGAGATTGATACCACCA+GGG | - | chr3_3:77389567-77389586 | Msa0474490:intron | 40.0% | |
! | ACAAGTTGGAAGCATGCATA+TGG | - | chr3_3:77389947-77389966 | Msa0474490:intron | 40.0% |
AATCAATCCGACGAATCTGA+AGG | + | chr3_3:77390225-77390244 | None:intergenic | 40.0% | |
TTCAGATTCGTCGGATTGAT+TGG | - | chr3_3:77390224-77390243 | Msa0474490:intron | 40.0% | |
TATGCCCCAAATAAAGGAGT+AGG | - | chr3_3:77390256-77390275 | Msa0474490:intron | 40.0% | |
ATGCCCCAAATAAAGGAGTA+GGG | - | chr3_3:77390257-77390276 | Msa0474490:intron | 40.0% | |
! | TAGCCCTACTCCTTTATTTG+GGG | + | chr3_3:77390263-77390282 | None:intergenic | 40.0% |
TAGGCAAACTTGGCTTAGAT+TGG | - | chr3_3:77391234-77391253 | Msa0474490:intron | 40.0% | |
AGCATGTTCTTCAAACTGAG+AGG | - | chr3_3:77391282-77391301 | Msa0474490:intron | 40.0% | |
GCATGTTCTTCAAACTGAGA+GGG | - | chr3_3:77391283-77391302 | Msa0474490:intron | 40.0% | |
CTGGTCTAACTTCTTGTCTT+AGG | - | chr3_3:77391500-77391519 | Msa0474490:intron | 40.0% | |
CCAAGTTATTCAAACAGAGG+GGG | - | chr3_3:77391548-77391567 | Msa0474490:intron | 40.0% | |
CAAGTTATTCAAACAGAGGG+GGG | - | chr3_3:77391549-77391568 | Msa0474490:intron | 40.0% | |
AGCAGAAGCTTCAACAGATT+TGG | - | chr3_3:77391681-77391700 | Msa0474490:intron | 40.0% | |
!! | GAAAAGAGAAGCATCGTCAA+CGG | - | chr3_3:77391726-77391745 | Msa0474490:intron | 40.0% |
! | TGAATTGCCTCAGGAGTTTT+TGG | - | chr3_3:77391756-77391775 | Msa0474490:intron | 40.0% |
AGATGTTCCAAAAACTCCTG+AGG | + | chr3_3:77391766-77391785 | None:intergenic | 40.0% | |
CAATTGGATCTCATTGAACC+TGG | - | chr3_3:77391802-77391821 | Msa0474490:intron | 40.0% | |
ATGGAAACTCCAGAATTCCA+CGG | + | chr3_3:77392025-77392044 | None:intergenic | 40.0% | |
GAGTTCAGGAAGAAAAAGAC+TGG | - | chr3_3:77392148-77392167 | Msa0474490:intron | 40.0% | |
! | ACTGGACAAGTTTTTGCTCA+AGG | - | chr3_3:77392166-77392185 | Msa0474490:intron | 40.0% |
! | CTGGACAAGTTTTTGCTCAA+GGG | - | chr3_3:77392167-77392186 | Msa0474490:intron | 40.0% |
TGCAAAAGGGGGAAACTTAA+GGG | + | chr3_3:77392479-77392498 | None:intergenic | 40.0% | |
TTGCAAAAGGGGGAAACTTA+AGG | + | chr3_3:77392480-77392499 | None:intergenic | 40.0% | |
TGACTCAGTCAAAATCAAGG+GGG | + | chr3_3:77392512-77392531 | None:intergenic | 40.0% | |
!! | CGTTGACTCAGTCAAAATCA+AGG | + | chr3_3:77392515-77392534 | None:intergenic | 40.0% |
ATGGAAGAAGGATAAGGAGA+TGG | + | chr3_3:77392701-77392720 | None:intergenic | 40.0% | |
AGATTGAGGTAGAAGAAGAG+AGG | + | chr3_3:77393075-77393094 | None:intergenic | 40.0% | |
TGATGTTGAGCTCTATGCTT+TGG | - | chr3_3:77393226-77393245 | Msa0474490:intron | 40.0% | |
GATGTTGAGCTCTATGCTTT+GGG | - | chr3_3:77393227-77393246 | Msa0474490:intron | 40.0% | |
GTCATCCACTGTTGATACAA+AGG | - | chr3_3:77393323-77393342 | Msa0474490:intron | 40.0% | |
CTTTGCCTTTGTATCAACAG+TGG | + | chr3_3:77393331-77393350 | None:intergenic | 40.0% | |
! | CAGAAGGTAGTTTGCAATAG+TGG | + | chr3_3:77393385-77393404 | None:intergenic | 40.0% |
!! | GGAATCAGTGAAGAGGTACT+TGG | - | chr3_3:77377729-77377748 | Msa0474490:three_prime_UTR | 45.0% |
!! | ATCAGTGAAGAGGTACTTGG+AGG | - | chr3_3:77377732-77377751 | Msa0474490:three_prime_UTR | 45.0% |
!! | AAGAGGTACTTGGAGGAGAA+AGG | - | chr3_3:77377739-77377758 | Msa0474490:three_prime_UTR | 45.0% |
!! | GAAAGGAGAAGCGTCGTTAA+AGG | - | chr3_3:77377756-77377775 | Msa0474490:three_prime_UTR | 45.0% |
AGATGTTCCAGAAACTTCGG+AGG | + | chr3_3:77377799-77377818 | None:intergenic | 45.0% | |
CTGGAACATCTAATCTTGGG+TGG | - | chr3_3:77377808-77377827 | Msa0474490:three_prime_UTR | 45.0% | |
AGTACGAACGAGTAAACGTG+GGG | + | chr3_3:77377887-77377906 | None:intergenic | 45.0% | |
GAGTACGAACGAGTAAACGT+GGG | + | chr3_3:77377888-77377907 | None:intergenic | 45.0% | |
AGAGTACGAACGAGTAAACG+TGG | + | chr3_3:77377889-77377908 | None:intergenic | 45.0% | |
CACATCCACCAGAGTAATGA+TGG | + | chr3_3:77378053-77378072 | None:intergenic | 45.0% | |
! | CATCATTACTCTGGTGGATG+TGG | - | chr3_3:77378051-77378070 | Msa0474490:intron | 45.0% |
! | ATTACTCTGGTGGATGTGGT+AGG | - | chr3_3:77378055-77378074 | Msa0474490:intron | 45.0% |
GCTGGATTTCAGTTGGATAC+TGG | - | chr3_3:77378097-77378116 | Msa0474490:intron | 45.0% | |
TGGCCAAGTTGTATTCTCGT+CGG | - | chr3_3:77379189-77379208 | Msa0474490:CDS | 45.0% | |
GCAAAGGGGCTAAAAGATAG+GGG | - | chr3_3:77379709-77379728 | Msa0474490:intron | 45.0% | |
GGTGAAAGCGAACAAACTCA+CGG | - | chr3_3:77379926-77379945 | Msa0474490:intron | 45.0% | |
CCGCTGTATGCTATTAACTG+GGG | + | chr3_3:77379953-77379972 | None:intergenic | 45.0% | |
CCCCAGTTAATAGCATACAG+CGG | - | chr3_3:77379950-77379969 | Msa0474490:intron | 45.0% | |
GCCGCTGTATGCTATTAACT+GGG | + | chr3_3:77379954-77379973 | None:intergenic | 45.0% | |
TGCCGCTGTATGCTATTAAC+TGG | + | chr3_3:77379955-77379974 | None:intergenic | 45.0% | |
! | CGTTGCAAATTCGAGAGCAT+AGG | + | chr3_3:77379993-77380012 | None:intergenic | 45.0% |
! | GTCTTGTTACGGTGTTCGTT+TGG | + | chr3_3:77380075-77380094 | None:intergenic | 45.0% |
AGATGCAGAGAGGTGATTCT+AGG | - | chr3_3:77380242-77380261 | Msa0474490:intron | 45.0% | |
GAAGGTTCTTCTGAGTCCAT+TGG | - | chr3_3:77381139-77381158 | Msa0474490:intron | 45.0% | |
TAGGGTTCTACGAGTAGGAA+AGG | - | chr3_3:77381441-77381460 | Msa0474490:intron | 45.0% | |
ACAGACCAAGTTTGTGCTCA+AGG | - | chr3_3:77381496-77381515 | Msa0474490:intron | 45.0% | |
CAGACCAAGTTTGTGCTCAA+GGG | - | chr3_3:77381497-77381516 | Msa0474490:intron | 45.0% | |
TACCTCTTGGTCGTAGAGAT+GGG | + | chr3_3:77381725-77381744 | None:intergenic | 45.0% | |
!!! | CCAGTTACGGGTTGTTTTTG+TGG | + | chr3_3:77382114-77382133 | None:intergenic | 45.0% |
CCACAAAAACAACCCGTAAC+TGG | - | chr3_3:77382111-77382130 | Msa0474490:intron | 45.0% | |
ATATATAGTTGGACCACGCG+AGG | - | chr3_3:77383970-77383989 | Msa0474490:intron | 45.0% | |
TATATAGTTGGACCACGCGA+GGG | - | chr3_3:77383971-77383990 | Msa0474490:intron | 45.0% | |
CGAATTTCCTCCCAAGTTTC+TGG | - | chr3_3:77384256-77384275 | Msa0474490:intron | 45.0% | |
AAAGGTTCCAGAAACTTGGG+AGG | + | chr3_3:77384266-77384285 | None:intergenic | 45.0% | |
GCTCAATGAGATCCAATCGT+AGG | + | chr3_3:77384301-77384320 | None:intergenic | 45.0% | |
CACATCCACCAGAGTAACAA+TGG | + | chr3_3:77384483-77384502 | None:intergenic | 45.0% | |
! | CATTGTTACTCTGGTGGATG+TGG | - | chr3_3:77384481-77384500 | Msa0474490:intron | 45.0% |
AGTATCCATCGGAAATCCAG+CGG | + | chr3_3:77384528-77384547 | None:intergenic | 45.0% | |
AGGGAAACTCCAGTATCCAT+CGG | + | chr3_3:77384539-77384558 | None:intergenic | 45.0% | |
GCATGAGACATTGATCTCGA+GGG | + | chr3_3:77384558-77384577 | None:intergenic | 45.0% | |
AGCATGAGACATTGATCTCG+AGG | + | chr3_3:77384559-77384578 | None:intergenic | 45.0% | |
CAAGGTTCTACGAGTAGGAA+AGG | - | chr3_3:77385459-77385478 | Msa0474490:intron | 45.0% | |
! | ACGGGCCAAATTTTTGCTCA+AGG | - | chr3_3:77385520-77385539 | Msa0474490:intron | 45.0% |
! | CGGGCCAAATTTTTGCTCAA+GGG | - | chr3_3:77385521-77385540 | Msa0474490:intron | 45.0% |
GACGCCCTTGAGCAAAAATT+TGG | + | chr3_3:77385528-77385547 | None:intergenic | 45.0% | |
GTGAAGGAAGCAAACCTGAT+AGG | - | chr3_3:77385599-77385618 | Msa0474490:intron | 45.0% | |
CTGGCCAAGTTCATTTCCAA+AGG | + | chr3_3:77385638-77385657 | None:intergenic | 45.0% | |
CACATGTGAGTATGAGAGAG+AGG | + | chr3_3:77385811-77385830 | None:intergenic | 45.0% | |
AGAAGGAACGATACCGGATT+TGG | - | chr3_3:77386751-77386770 | Msa0474490:intron | 45.0% | |
GTTCAATGAGATCCAATCGC+AGG | + | chr3_3:77386868-77386887 | None:intergenic | 45.0% | |
CGATTGGATCTCATTGAACC+TGG | - | chr3_3:77386869-77386888 | Msa0474490:CDS | 45.0% | |
ATTGAGAAGATGACACGACC+AGG | + | chr3_3:77386890-77386909 | None:intergenic | 45.0% | |
AGTACGAACGAGTAAACGTG+GGG | + | chr3_3:77377887-77377906 | None:intergenic | 45.0% | |
GAGTACGAACGAGTAAACGT+GGG | + | chr3_3:77377888-77377907 | None:intergenic | 45.0% | |
AGAGTACGAACGAGTAAACG+TGG | + | chr3_3:77377889-77377908 | None:intergenic | 45.0% | |
AAATTCAGCTGCGGGAATTG+CGG | + | chr3_3:77387089-77387108 | None:intergenic | 45.0% | |
TTTCCACGGAAATTCAGCTG+CGG | + | chr3_3:77387098-77387117 | None:intergenic | 45.0% | |
GCTGAATTTCCGTGGAAATC+TGG | - | chr3_3:77387100-77387119 | Msa0474490:intron | 45.0% | |
ACGGAAACTCCAGATTTCCA+CGG | + | chr3_3:77387112-77387131 | None:intergenic | 45.0% | |
TAGCAAATGTGCAATGGACG+TGG | + | chr3_3:77387290-77387309 | None:intergenic | 45.0% | |
GTGTTTGCCAAACCTGAAGA+AGG | + | chr3_3:77388015-77388034 | None:intergenic | 45.0% | |
AATATCTAACCGGGCAATGC+CGG | - | chr3_3:77388957-77388976 | Msa0474490:intron | 45.0% | |
ATTCCCCGTTGCTTATGCAA+TGG | - | chr3_3:77389536-77389555 | Msa0474490:intron | 45.0% | |
CTACCATTGCATAAGCAACG+GGG | + | chr3_3:77389542-77389561 | None:intergenic | 45.0% | |
CCTACCATTGCATAAGCAAC+GGG | + | chr3_3:77389543-77389562 | None:intergenic | 45.0% | |
GTTGCTTATGCAATGGTAGG+AGG | - | chr3_3:77389543-77389562 | Msa0474490:intron | 45.0% | |
!! | CTTTCCTAGTCTTAGAACCC+TGG | + | chr3_3:77389587-77389606 | None:intergenic | 45.0% |
!! | CAGGGTTCTAAGACTAGGAA+AGG | - | chr3_3:77389585-77389604 | Msa0474490:intron | 45.0% |
! | ACTGGCCAAGTTTTTGCTCA+AGG | - | chr3_3:77389646-77389665 | Msa0474490:intron | 45.0% |
! | CTGGCCAAGTTTTTGCTCAA+GGG | - | chr3_3:77389647-77389666 | Msa0474490:intron | 45.0% |
TAGAGATGGCACAACAGCAA+TGG | + | chr3_3:77389862-77389881 | None:intergenic | 45.0% | |
GTACCTCTTGATCGTAGAGA+TGG | + | chr3_3:77389876-77389895 | None:intergenic | 45.0% | |
TTGCCTTGAGCGAAAGATGA+GGG | - | chr3_3:77389995-77390014 | Msa0474490:intron | 45.0% | |
CCCCCTCTGTTTGAATAACT+TGG | + | chr3_3:77391551-77391570 | None:intergenic | 45.0% | |
GGTAGATGATGAATTGCCTC+AGG | - | chr3_3:77391747-77391766 | Msa0474490:intron | 45.0% | |
TTGGAACATCTAACCTTGCG+CGG | - | chr3_3:77391775-77391794 | Msa0474490:intron | 45.0% | |
ATACGAACGAGTAAACGTGG+AGG | + | chr3_3:77391853-77391872 | None:intergenic | 45.0% | |
AGGATACGAACGAGTAAACG+TGG | + | chr3_3:77391856-77391875 | None:intergenic | 45.0% | |
TCAGGTAAATACTTGCACGG+TGG | - | chr3_3:77391941-77391960 | Msa0474490:intron | 45.0% | |
!! | TGGTGCTATAACTACTCTGG+TGG | - | chr3_3:77391961-77391980 | Msa0474490:intron | 45.0% |
! | ACTACTCTGGTGGATATCGT+AGG | - | chr3_3:77391971-77391990 | Msa0474490:intron | 45.0% |
AAATCCAGCTGCTGGAATTG+CGG | + | chr3_3:77392002-77392021 | None:intergenic | 45.0% | |
GCAAAAGGGGGAAACTTAAG+GGG | + | chr3_3:77392478-77392497 | None:intergenic | 45.0% | |
GACTCAGTCAAAATCAAGGG+GGG | + | chr3_3:77392511-77392530 | None:intergenic | 45.0% | |
!! | GATAAGGAGATGGAGGTGTT+GGG | + | chr3_3:77392691-77392710 | None:intergenic | 45.0% |
GAAGAAGGATAAGGAGATGG+AGG | + | chr3_3:77392698-77392717 | None:intergenic | 45.0% | |
GAGGAGATGGAAGAAGGATA+AGG | + | chr3_3:77392707-77392726 | None:intergenic | 45.0% | |
GAAGAGAGGCTTCTTAGTCT+TGG | + | chr3_3:77393061-77393080 | None:intergenic | 45.0% | |
TACAAAGGCAAAGAAGGTCG+TGG | - | chr3_3:77393338-77393357 | Msa0474490:CDS | 45.0% | |
!!! | TAAAAATTTTGAAAAAAATA+CGG | + | chr3_3:77379378-77379397 | None:intergenic | 5.0% |
!! | AAAAATATATTAAAAAATTC+TGG | + | chr3_3:77379568-77379587 | None:intergenic | 5.0% |
!!! | TTTTAATTAATAATATATGT+TGG | - | chr3_3:77381785-77381804 | Msa0474490:intron | 5.0% |
!!! | TTTTAATATATTTTCTATTT+TGG | + | chr3_3:77382039-77382058 | None:intergenic | 5.0% |
!! | AAAAATTTACTAAAAAAATA+GGG | + | chr3_3:77382898-77382917 | None:intergenic | 5.0% |
!!! | TAGTTTTTTTTTATAAAAAA+AGG | - | chr3_3:77387847-77387866 | Msa0474490:intron | 5.0% |
!!! | ATAAGTAAATTTTTTTTTAT+AGG | - | chr3_3:77388484-77388503 | Msa0474490:intron | 5.0% |
!!! | TAAGTAAATTTTTTTTTATA+GGG | - | chr3_3:77388485-77388504 | Msa0474490:intron | 5.0% |
!! | ATCATAAAAATAAATATAAA+TGG | + | chr3_3:77388855-77388874 | None:intergenic | 5.0% |
!!! | AATATGAATTTTTAAATTTT+TGG | + | chr3_3:77390528-77390547 | None:intergenic | 5.0% |
!!! | AAAAAATTCTAATTTTTTTT+TGG | - | chr3_3:77390564-77390583 | Msa0474490:intron | 5.0% |
!!! | TATATTTTTTTTATACTAAT+AGG | + | chr3_3:77390829-77390848 | None:intergenic | 5.0% |
AATCTTGGGTGGCTTACGCT+TGG | - | chr3_3:77377819-77377838 | Msa0474490:three_prime_UTR | 50.0% | |
ATTGAGAAAACGACACGGCC+AGG | + | chr3_3:77377856-77377875 | None:intergenic | 50.0% | |
GTACGAACGAGTAAACGTGG+GGG | + | chr3_3:77377886-77377905 | None:intergenic | 50.0% | |
TCAGGTACGTACTTGCACCT+TGG | - | chr3_3:77378025-77378044 | Msa0474490:intron | 50.0% | |
CCAGAGTAATGATGGCACCA+AGG | + | chr3_3:77378045-77378064 | None:intergenic | 50.0% | |
!! | CCTTGGTGCCATCATTACTC+TGG | - | chr3_3:77378042-77378061 | Msa0474490:intron | 50.0% |
!! | TGGTGCCATCATTACTCTGG+TGG | - | chr3_3:77378045-77378064 | Msa0474490:intron | 50.0% |
ATCCAACTGAAATCCAGCGG+CGG | + | chr3_3:77378095-77378114 | None:intergenic | 50.0% | |
TGACCAAGTCAACGCATACG+TGG | - | chr3_3:77378473-77378492 | Msa0474490:intron | 50.0% | |
!! | ATGCCACGTATGCGTTGACT+TGG | + | chr3_3:77379659-77379678 | None:intergenic | 50.0% |
!! | ATGCCACGTATGCGTTGACT+TGG | - | chr3_3:77379659-77379678 | Msa0474490:intron | 50.0% |
TGACCAAGTCAACGCATACG+TGG | + | chr3_3:77378473-77378492 | None:intergenic | 50.0% | |
GATGCTAGGGTTCTACGAGT+AGG | - | chr3_3:77381436-77381455 | Msa0474490:intron | 50.0% | |
CCTCAACTCCACGCTTACTA+CGG | + | chr3_3:77381467-77381486 | None:intergenic | 50.0% | |
CGGAATGTAGCAGTGCTATC+AGG | + | chr3_3:77381596-77381615 | None:intergenic | 50.0% | |
GTACCTCTTGGTCGTAGAGA+TGG | + | chr3_3:77381726-77381745 | None:intergenic | 50.0% | |
AATCCAGCAAACCCACGTGT+GGG | - | chr3_3:77382200-77382219 | Msa0474490:intron | 50.0% | |
ATATAGTTGGACCACGCGAG+GGG | - | chr3_3:77383972-77383991 | Msa0474490:intron | 50.0% | |
CGATTGGATCTCATTGAGCC+TGG | - | chr3_3:77384302-77384321 | Msa0474490:CDS | 50.0% | |
ATTGAGAAAACGACACGGCC+AGG | + | chr3_3:77377856-77377875 | None:intergenic | 50.0% | |
AGAGTGCGAACGAGTAAACG+TGG | + | chr3_3:77384356-77384375 | None:intergenic | 50.0% | |
TCAGGTAAGCACTTGCACGT+TGG | - | chr3_3:77384455-77384474 | Msa0474490:CDS | 50.0% | |
!! | CGTTGGTGCCATTGTTACTC+TGG | - | chr3_3:77384472-77384491 | Msa0474490:CDS | 50.0% |
!! | TGGTGCCATTGTTACTCTGG+TGG | - | chr3_3:77384475-77384494 | Msa0474490:CDS | 50.0% |
! | GTTACTCTGGTGGATGTGGT+AGG | - | chr3_3:77384485-77384504 | Msa0474490:intron | 50.0% |
GCTGGATTTCCGATGGATAC+TGG | - | chr3_3:77384527-77384546 | Msa0474490:intron | 50.0% | |
!! | CATTGGCTTGTCAGGGTGAT+TGG | - | chr3_3:77384859-77384878 | Msa0474490:intron | 50.0% |
TAGGTTCAAAGGGTGGGTGA+TGG | - | chr3_3:77385670-77385689 | Msa0474490:CDS | 50.0% | |
! | AAAGGGTGGGTGATGGCAAT+TGG | - | chr3_3:77385677-77385696 | Msa0474490:CDS | 50.0% |
GATTTGGCATCTTCACGCGA+GGG | - | chr3_3:77386636-77386655 | Msa0474490:CDS | 50.0% | |
GTACGAACGAGTAAACGTGG+GGG | + | chr3_3:77377886-77377905 | None:intergenic | 50.0% | |
TCAGGTAAGTACTTGCACGG+TGG | - | chr3_3:77387028-77387047 | Msa0474490:CDS | 50.0% | |
!! | TGGTGCTATCACTACTCTGG+TGG | - | chr3_3:77387048-77387067 | Msa0474490:CDS | 50.0% |
! | ACTACTCTGGTGGATATCGC+AGG | - | chr3_3:77387058-77387077 | Msa0474490:CDS | 50.0% |
TTCCACGGAAATTCAGCTGC+GGG | + | chr3_3:77387097-77387116 | None:intergenic | 50.0% | |
ATATCTAACCGGGCAATGCC+GGG | - | chr3_3:77388958-77388977 | Msa0474490:intron | 50.0% | |
TTTATAGACCCGGCATTGCC+CGG | + | chr3_3:77388969-77388988 | None:intergenic | 50.0% | |
CCCGTTGCTTATGCAATGGT+AGG | - | chr3_3:77389540-77389559 | Msa0474490:intron | 50.0% | |
!! | ACCACCAGGGTTCTAAGACT+AGG | - | chr3_3:77389580-77389599 | Msa0474490:intron | 50.0% |
!! | TCCTAGTCTTAGAACCCTGG+TGG | + | chr3_3:77389584-77389603 | None:intergenic | 50.0% |
! | CTGTTCTAAGCGTGGAGTTG+AGG | - | chr3_3:77389614-77389633 | Msa0474490:intron | 50.0% |
GACGCCCTTGAGCAAAAACT+TGG | + | chr3_3:77389654-77389673 | None:intergenic | 50.0% | |
GGAAGCAAAGCTGATAGCAC+TGG | - | chr3_3:77389745-77389764 | Msa0474490:CDS | 50.0% | |
CACAACAGCAATGGAGAGTG+AGG | + | chr3_3:77389853-77389872 | None:intergenic | 50.0% | |
GTGCCATCTCTACGATCAAG+AGG | - | chr3_3:77389870-77389889 | Msa0474490:intron | 50.0% | |
CTTGCCTTGAGCGAAAGATG+AGG | - | chr3_3:77389994-77390013 | Msa0474490:intron | 50.0% | |
TCTCCCTCATCTTTCGCTCA+AGG | + | chr3_3:77390001-77390020 | None:intergenic | 50.0% | |
TTCAAACTGAGAGGGCAGTG+AGG | - | chr3_3:77391291-77391310 | Msa0474490:intron | 50.0% | |
ATTGAGAAGACGACACGACC+AGG | + | chr3_3:77391823-77391842 | None:intergenic | 50.0% | |
!! | CGGTGGTGCTATAACTACTC+TGG | - | chr3_3:77391958-77391977 | Msa0474490:intron | 50.0% |
GCTGGATTTCCGTGGAATTC+TGG | - | chr3_3:77392013-77392032 | Msa0474490:intron | 50.0% | |
CTGTTGTAAGCGTGGAGTTC+AGG | - | chr3_3:77392134-77392153 | Msa0474490:intron | 50.0% | |
GGCTTGAAGGTTGCAAAAGG+GGG | + | chr3_3:77392490-77392509 | None:intergenic | 50.0% | |
GGGCTTGAAGGTTGCAAAAG+GGG | + | chr3_3:77392491-77392510 | None:intergenic | 50.0% | |
GGGGCTTGAAGGTTGCAAAA+GGG | + | chr3_3:77392492-77392511 | None:intergenic | 50.0% | |
CAAAATCAAGGGGGGCTTGA+AGG | + | chr3_3:77392503-77392522 | None:intergenic | 50.0% | |
TGACTGAGTCAACGCTTACG+TGG | - | chr3_3:77392521-77392540 | Msa0474490:intron | 50.0% | |
TTCCTACGTGACGTCCAACT+AGG | + | chr3_3:77392549-77392568 | None:intergenic | 50.0% | |
! | GGATAAGGAGATGGAGGTGT+TGG | + | chr3_3:77392692-77392711 | None:intergenic | 50.0% |
!! | GGTCGTGGAACTCTAAAGTG+TGG | - | chr3_3:77393353-77393372 | Msa0474490:CDS | 50.0% |
!! | CGTGGAACTCTAAAGTGTGG+AGG | - | chr3_3:77393356-77393375 | Msa0474490:CDS | 50.0% |
CGCTTGGATCTCATTGAGCC+TGG | - | chr3_3:77377835-77377854 | Msa0474490:three_prime_UTR | 55.0% | |
TCCAACTGAAATCCAGCGGC+GGG | + | chr3_3:77378094-77378113 | None:intergenic | 55.0% | |
ATGTGGGCAGCTAGCTACTG+TGG | + | chr3_3:77381195-77381214 | None:intergenic | 55.0% | |
AGGAAAGGCCGTAGTAAGCG+TGG | - | chr3_3:77381456-77381475 | Msa0474490:intron | 55.0% | |
CCGTAGTAAGCGTGGAGTTG+AGG | - | chr3_3:77381464-77381483 | Msa0474490:intron | 55.0% | |
GACGCCCTTGAGCACAAACT+TGG | + | chr3_3:77381504-77381523 | None:intergenic | 55.0% | |
GAGGTTCAAAGGGTGGGTGA+TGG | - | chr3_3:77381666-77381685 | Msa0474490:intron | 55.0% | |
GTCCCATCTCTACGACCAAG+AGG | - | chr3_3:77381720-77381739 | Msa0474490:intron | 55.0% | |
!! | TGGGTTTGCTGGATTGTCCG+TGG | + | chr3_3:77382195-77382214 | None:intergenic | 55.0% |
CAATCCAGCAAACCCACGTG+TGG | - | chr3_3:77382199-77382218 | Msa0474490:intron | 55.0% | |
CTGGAACCTTTCATCGTGCG+TGG | - | chr3_3:77384275-77384294 | Msa0474490:intron | 55.0% | |
GTGCGAACGAGTAAACGTGG+AGG | + | chr3_3:77384353-77384372 | None:intergenic | 55.0% | |
GCAATTGCAATTCCTGCCGC+TGG | - | chr3_3:77384509-77384528 | Msa0474490:intron | 55.0% | |
GGATTTGGCATCTTCACGCG+AGG | - | chr3_3:77386635-77386654 | Msa0474490:CDS | 55.0% | |
AATCTTACGCGCCCTGCGAT+TGG | - | chr3_3:77386853-77386872 | Msa0474490:intron | 55.0% | |
!! | CGGTGGTGCTATCACTACTC+TGG | - | chr3_3:77387045-77387064 | Msa0474490:CDS | 55.0% |
! | ACTCTGGTGGATATCGCAGG+CGG | - | chr3_3:77387061-77387080 | Msa0474490:CDS | 55.0% |
TTCCCGCAGCTGAATTTCCG+TGG | - | chr3_3:77387092-77387111 | Msa0474490:intron | 55.0% | |
! | GGCTGTAGCTGTTCTAAGCG+TGG | - | chr3_3:77389606-77389625 | Msa0474490:intron | 55.0% |
TGAGAGGGCAGTGAGGTGAA+AGG | - | chr3_3:77391298-77391317 | Msa0474490:intron | 55.0% | |
GAGAGGGCAGTGAGGTGAAA+GGG | - | chr3_3:77391299-77391318 | Msa0474490:intron | 55.0% | |
AACCTTGCGCGGCCTACAAT+TGG | - | chr3_3:77391786-77391805 | Msa0474490:intron | 55.0% | |
ATCCAATTGTAGGCCGCGCA+AGG | + | chr3_3:77391791-77391810 | None:intergenic | 55.0% | |
TTCCAGCAGCTGGATTTCCG+TGG | - | chr3_3:77392005-77392024 | Msa0474490:intron | 55.0% | |
TTCCACGGAAATCCAGCTGC+TGG | + | chr3_3:77392010-77392029 | None:intergenic | 55.0% | |
GGCTGTAGCTGTTGTAAGCG+TGG | - | chr3_3:77392126-77392145 | Msa0474490:intron | 55.0% | |
GGGGGCTTGAAGGTTGCAAA+AGG | + | chr3_3:77392493-77392512 | None:intergenic | 55.0% | |
ACGCTTACGTGGCTCCTAGT+TGG | - | chr3_3:77392532-77392551 | Msa0474490:intron | 55.0% | |
CTCCTAGTTGGACGTCACGT+AGG | - | chr3_3:77392544-77392563 | Msa0474490:intron | 55.0% | |
TCAATCGCAATTCCCGCCGC+TGG | - | chr3_3:77378079-77378098 | Msa0474490:intron | 60.0% | |
TCCCGCCGCTGGATTTCAGT+TGG | - | chr3_3:77378090-77378109 | Msa0474490:intron | 60.0% | |
TCGGTTTCGTGCCCACACGT+GGG | + | chr3_3:77382214-77382233 | None:intergenic | 60.0% | |
TTCGGTTTCGTGCCCACACG+TGG | + | chr3_3:77382215-77382234 | None:intergenic | 60.0% | |
TCACTTTACTGCCCCTCGCG+TGG | + | chr3_3:77383986-77384005 | None:intergenic | 60.0% | |
CGTAGGCCACGCACGATGAA+AGG | + | chr3_3:77384284-77384303 | None:intergenic | 60.0% | |
CATCGTGCGTGGCCTACGAT+TGG | - | chr3_3:77384286-77384305 | Msa0474490:intron | 60.0% | |
TCCTGCCGCTGGATTTCCGA+TGG | - | chr3_3:77384520-77384539 | Msa0474490:intron | 60.0% | |
TCCATCGGAAATCCAGCGGC+AGG | + | chr3_3:77384524-77384543 | None:intergenic | 60.0% | |
TCACGCGAGGGCCAGTAAAG+TGG | - | chr3_3:77386648-77386667 | Msa0474490:CDS | 60.0% | |
GTGCCCACACGTGGGTTTGC+TGG | + | chr3_3:77382206-77382225 | None:intergenic | 65.0% | |
GCAGCCGCAATTCCAGCAGC+TGG | - | chr3_3:77391995-77392014 | Msa0474490:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_3 | gene | 77377712 | 77393508 | 77377712 | ID=Msa0474490;Name=Msa0474490 |
chr3_3 | mRNA | 77377712 | 77393508 | 77377712 | ID=Msa0474490-mRNA-1;Parent=Msa0474490;Name=Msa0474490-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|0.18|0.08|1|0.36|0.08|12|283|617 |
chr3_3 | exon | 77377712 | 77378014 | 77377712 | ID=Msa0474490-mRNA-1:exon:20712;Parent=Msa0474490-mRNA-1 |
chr3_3 | exon | 77379030 | 77379275 | 77379030 | ID=Msa0474490-mRNA-1:exon:20711;Parent=Msa0474490-mRNA-1 |
chr3_3 | exon | 77379364 | 77379548 | 77379364 | ID=Msa0474490-mRNA-1:exon:20710;Parent=Msa0474490-mRNA-1 |
chr3_3 | exon | 77381501 | 77381658 | 77381501 | ID=Msa0474490-mRNA-1:exon:20709;Parent=Msa0474490-mRNA-1 |
chr3_3 | exon | 77384091 | 77384188 | 77384091 | ID=Msa0474490-mRNA-1:exon:20708;Parent=Msa0474490-mRNA-1 |
chr3_3 | exon | 77384297 | 77384499 | 77384297 | ID=Msa0474490-mRNA-1:exon:20707;Parent=Msa0474490-mRNA-1 |
chr3_3 | exon | 77385642 | 77385781 | 77385642 | ID=Msa0474490-mRNA-1:exon:20706;Parent=Msa0474490-mRNA-1 |
chr3_3 | exon | 77386622 | 77386761 | 77386622 | ID=Msa0474490-mRNA-1:exon:20705;Parent=Msa0474490-mRNA-1 |
chr3_3 | exon | 77386864 | 77387082 | 77386864 | ID=Msa0474490-mRNA-1:exon:20704;Parent=Msa0474490-mRNA-1 |
chr3_3 | exon | 77389673 | 77389799 | 77389673 | ID=Msa0474490-mRNA-1:exon:20703;Parent=Msa0474490-mRNA-1 |
chr3_3 | exon | 77393052 | 77393191 | 77393052 | ID=Msa0474490-mRNA-1:exon:20702;Parent=Msa0474490-mRNA-1 |
chr3_3 | exon | 77393331 | 77393508 | 77393331 | ID=Msa0474490-mRNA-1:exon:20701;Parent=Msa0474490-mRNA-1 |
chr3_3 | CDS | 77393331 | 77393508 | 77393331 | ID=Msa0474490-mRNA-1:cds;Parent=Msa0474490-mRNA-1 |
chr3_3 | CDS | 77393052 | 77393191 | 77393052 | ID=Msa0474490-mRNA-1:cds;Parent=Msa0474490-mRNA-1 |
chr3_3 | CDS | 77389673 | 77389799 | 77389673 | ID=Msa0474490-mRNA-1:cds;Parent=Msa0474490-mRNA-1 |
chr3_3 | CDS | 77386864 | 77387082 | 77386864 | ID=Msa0474490-mRNA-1:cds;Parent=Msa0474490-mRNA-1 |
chr3_3 | CDS | 77386622 | 77386761 | 77386622 | ID=Msa0474490-mRNA-1:cds;Parent=Msa0474490-mRNA-1 |
chr3_3 | CDS | 77385642 | 77385781 | 77385642 | ID=Msa0474490-mRNA-1:cds;Parent=Msa0474490-mRNA-1 |
chr3_3 | CDS | 77384297 | 77384499 | 77384297 | ID=Msa0474490-mRNA-1:cds;Parent=Msa0474490-mRNA-1 |
chr3_3 | CDS | 77384091 | 77384188 | 77384091 | ID=Msa0474490-mRNA-1:cds;Parent=Msa0474490-mRNA-1 |
chr3_3 | CDS | 77381501 | 77381658 | 77381501 | ID=Msa0474490-mRNA-1:cds;Parent=Msa0474490-mRNA-1 |
chr3_3 | CDS | 77379364 | 77379548 | 77379364 | ID=Msa0474490-mRNA-1:cds;Parent=Msa0474490-mRNA-1 |
chr3_3 | CDS | 77379030 | 77379275 | 77379030 | ID=Msa0474490-mRNA-1:cds;Parent=Msa0474490-mRNA-1 |
chr3_3 | CDS | 77377995 | 77378014 | 77377995 | ID=Msa0474490-mRNA-1:cds;Parent=Msa0474490-mRNA-1 |
chr3_3 | three_prime_UTR | 77377712 | 77377994 | 77377712 | ID=Msa0474490-mRNA-1:three_prime_utr;Parent=Msa0474490-mRNA-1 |
Gene Sequence |
Protein sequence |